Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004792

Physical Location & Seq

Genomic Coordinates Forward (+)

2201432 .. 2205171

Gene Structure 3740 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G06980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2346 bp

ATGTTGGCGAGAGCTCCACCGCCTTATTTTAATTTCCCGGCGAGGAATAATACTATCTGTAATCGGAATGAGATTGTGCGGTTGTTTCGTAACGGCGGAGGAGTGGTAGCTAGAGGAGCTGGTTTCACTCGGCGACCACTGGAAACTTCGAGCTCTTACGACGATTCCACCGATGACGGATTCGTTATCATCAGTGCGGCAGATAAGGAGAATGAGTTCGCTCCTCCGCCTTCTTCCGATTTACTCTCTTCGATTCCGTCAGAATCTGCGAGAAGAAATGGTTCGCGTTCGAGAGGTCTGACTGCGAGTTTTGGAAGGTTAAAGGCCCAGAAAGTGAAAGCTCTTGTTGGGAAGGTAACGCAGAAGAAGCAGCATATGAGTCACAATGAGGAAGAAGACGAGGATGACGCCTCTGATGAGAATTATTCTGCGGATGAAGGGTTTGGTTCATCATCAATTCTGGATTTGATGAGGAAGAAGCTGGCTATGAAGGCTATTCCTAGATCAGGAAAATCTGCAGAGAGGAACGAGGTAAAAAGAGCTAGCAAAGTGCGGGAATCTAGAGAGTCAAGAAGAGATTTAGATAGATTGGAAGGAGATGATGAAGATGTTGATGAGGTTTCAAATCCTGACAGGTTTACTGATAATCAGAGAGCAGGGTCGCGGAGTTCATATTCAAAAGGTGGTTATGCTGCTAACTCCAGGGGTAAGGGTGATAGGCTTTCGGTTGCAAGAGATTTAGATTCATTTGAGGGACATGGTAGAGCTATTGATGAGGTTTCAAACCCTCGAAAGTTTAATGATAACGAGAGAGCAGAATCAAGGAGTTCATATTCAAGAGACTCTTCTGCTAACTCCAGGGGTAGAGAAGATAGGCGTTTTGTTGCCAAAGAGTTAGATACATTTCAGGGACGTGATAAAGCTTATGATGAGGTTTATAATCCTCGAAGGTTCACTGATAATGAGAGAGGACTCAGAGGAGGATCACATTCAAAAGGCTCTGATACTAACTCTCGGGGTTGGGGTGATAGGCGTTCTGTTGTATATACAAGAGATATGGATGATTGGAGAGAGAGGAATAAAACCAAGGATACTAGGGAGACTGGCTTTTTTAGCCGGAAAACTTTTGCAGAAATTGGATGTAGTGAAGATATGATGAAGGCCTTAAAGGAACAGAATTTTGATCGCCCGGCACATATTCAGGCTATGGCTTTTTCACCAGTTATTGATGGAAAGAGTTGTATCATAGCTGACCAAAGTGGATCAGGCAAGACACTGGCATATCTTGTCCCTGTTATTCAGCGTCTCAGGGAAGAAGAGCTTCAAGGACACAGCAAATCGTCTCCTGGGTGTCCTCGTGTCATTGTTCTGGTACCAACTGCAGAGTTGGCTTCTCAGGTTCTTGCTAACTGTAGATCAATATCAAAGTCTGGGGTCCCGTTCCGTTCGATGGTAGTGACGGGTGGCTTCAGACAACGAACCCAGCTAGAAAATTTAGAGCAAGGTGTTGACGTTTTGATTGCAACACCAGGGCGTTTCACGTACCTAATGAACGAAGGAATTTTGGGGTTGTCAAATTTAAGATGTGCCATCTTGGATGAGGTGGATATACTCTTTGGCGACGATGAGTTTGAGGCAGCCCTGCAAAATTTGATAAACTCTTCTCCTGTTACTGCACAGTATCTATTTGTTACAGCAACCTTGCCACTTGAAATATACAACAAACTTGTTGAAGTTTTCCCTGATTGTGAAGTTGTAATGGGACCTCGAGTGCACCGTGTTAGTAATGCTCTCGAAGAGTTTCTTGTTGACTGTAGTGGAGATGATAATGCAGAGAAAACTCCTGAGACTGCATTTCAGAACAAGAAAACTGCTCTCCTTCAGATAATGGAGGAAAACCCTGTTTCCAAAACTATTATCTTCTGCAATAAGATTGAGACATGTAGGAAAGTTGAGAACATATTTAAGCGGGTTGATAGAAAGGAAAGACAGTTGCACGTCCTACCTTTTCATGCTGCACTCTCACAAGAGTCAAGGCTTACAAACATGCAAGAATTCACATCATCTCAGCCCGAAGAAAATTCACTGTTTCTGGTTTGCACTGATAGAGCCTCCCGTGGGATAGATTTCTCTGGTGTTGATCATGTGGTGCTCTTTGACTTCCCACGTGACCCCAGTGAATACGTGAGACGTGTAGGAAGAACAGCAAGAGGGGCTAGGGGAAAAGGAAAGGCTTTCATCTTTGTGGTGGGGAAGCAAGTAGGGTTGGCACGGAGGATAATTGAGCGAAATGAGAAAGGTCACCCAGTTCATGATGTCCCAAACGCTTACGAGTTCACAACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006968 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0009753 GO:0009814 GO:0009817 GO:0009987 GO:0010033 GO:0010501 GO:0014070 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0032870 GO:0034641 GO:0035690 GO:0042221 GO:0042493 GO:0042623 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046483 GO:0046677 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0070013 GO:0070035 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071369 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0090304 GO:0098542 GO:0140098 GO:1901360 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

781

Amino Acids

87.43

Weight (kDa)

7.56

Isoelectric Point (pI)

46.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	399 - 571	5.6e-33	DEAD/DEAH box helicase
Helicase_C	PF00271	622 - 737	6.9e-24	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004792)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06980
fragaria_vesca	FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860
malus_domestica	MD16G1131600.v1.1
prunus_persica	Prupe.1G209200_v2.0.a1
pyrus_communis	pycom16g11600
rosa_chinensis	RchiOBHm_Chr4g0410871 RchiOBHm_Chr4g0428121
rosa_laevigata	RLG00000007180 RLG00000008393
rosa_multiflora	Rmu_sc0004940.1_g000014 Rmu_sc0007108.1_g000006 Rmu_sc0009599.1_g000014
rosa_roxburghii	Rroxscaffold_5G00369830
rosa_rugosa	Rorug04G0222400
rosa_samantha	Rh4AG163400 Rh4AG279700 Rh4BG285100 Rh4CG176300 Rh4CG300700 Rh4DG159100 Rh4DG282200
rosa_wichuraiana	Rw0G005430 Rw4G024300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	939
Acc65I	GGTACC	1 cut(s)	1372
AccB1I	GGYRCC	1 cut(s)	1372
AccII	CGCG	2 cut(s)	286, 664
AciI	CCGC	9 cut(s)	20, 79, 96, 197, 227, 431, 553, 664, 1969
AclWI	GGATC	2 cut(s)	991, 1270
AcsI	RAATTY	7 cut(s)	1177, 1492, 1560, 1576, 1648, 2054, 2080
AcuI	CTGAAG	2 cut(s)	1453, 1865
AcvI	CACGTG	1 cut(s)	2168
AcyI	GRCGYC	1 cut(s)	408
AfaI	GTAC	2 cut(s)	1374, 1544
AfiI	CCNNNNNNNGG	3 cut(s)	506, 1450, 2118
AflIII	ACRYGT	2 cut(s)	1940, 2191
AgsI	TTSAA	8 cut(s)	624, 678, 783, 837, 993, 1325, 1712, 1733
AjiI	CACGTC	3 cut(s)	914, 1999, 2192
AjnI	CCWGG	4 cut(s)	701, 857, 1345, 1528
AloI	GAACNNNNNNTCC	2 cut(s)	200, 232
Alw21I	GWGCWC	4 cut(s)	16, 155, 1776, 2154
Alw26I	GTCTC	7 cut(s)	834, 1094, 1310, 1347, 1841, 1931, 2182
Alw44I	GTGCAC	1 cut(s)	1772
AlwI	GGATC	2 cut(s)	991, 1270
AlwNI	CAGNNNCTG	1 cut(s)	266
Ama87I	CYCGRG	2 cut(s)	1014, 1767
AoxI	GGCC	2 cut(s)	324, 1161
ApaLI	GTGCAC	1 cut(s)	1772
ApeKI	GCWGC	4 cut(s)	370, 692, 1637, 2015
ApoI	RAATTY	7 cut(s)	1177, 1492, 1560, 1576, 1648, 2054, 2080
ArsI	GACNNNNNNTTYG	2 cut(s)	1613, 1645
Asp700I	GAANNNNTTC	4 cut(s)	215, 280, 1320, 1800
Asp718I	GGTACC	1 cut(s)	1372
AspS9I	GGNCC	3 cut(s)	325, 1435, 1763
AsuC2I	CCSGG	2 cut(s)	38, 1190
AsuHPI	GGTGA	4 cut(s)	725, 1037, 1209, 2294
AsuNHI	GCTAGC	1 cut(s)	542
AvaI	CYCGRG	2 cut(s)	1014, 1767
AvaII	GGWCC	2 cut(s)	1435, 1763
BaeGI	GKGCMC	1 cut(s)	1776
BanI	GGYRCC	1 cut(s)	1372
BanII	GRGCYC	2 cut(s)	16, 155
BauI	CACGAG	1 cut(s)	1356
BbrPI	CACGTG	1 cut(s)	2168
BbsI	GAAGAC	1 cut(s)	402
Bbv12I	GWGCWC	4 cut(s)	16, 155, 1776, 2154
BbvI	GCAGC	4 cut(s)	382, 679, 1649, 2002
BccI	CCATC	3 cut(s)	1223, 1444, 1598
BceAI	ACGGC	1 cut(s)	109
BciT130I	CCWGG	4 cut(s)	703, 859, 1347, 1530
BciVI	GTATCC	1 cut(s)	1084
BclI	TGATCA	1 cut(s)	2140
BcnI	CCSGG	2 cut(s)	38, 1190
BcoDI	GTCTC	7 cut(s)	834, 1094, 1310, 1347, 1841, 1931, 2182
BfaI	CTAG	7 cut(s)	111, 501, 543, 561, 1095, 1487, 2217
BfmI	CTRYAG	4 cut(s)	516, 1380, 1411, 1813
BfuI	GTATCC	1 cut(s)	1084
BisI	GCNGC	5 cut(s)	198, 371, 693, 1638, 2016
BlsI	GCNGC	5 cut(s)	199, 372, 694, 1639, 2017
Bme1390I	CCNGG	6 cut(s)	38, 703, 859, 1190, 1347, 1530
Bme18I	GGWCC	2 cut(s)	1435, 1763
BmeT110I	CYCGRG	2 cut(s)	1014, 1767
BmgBI	CACGTC	3 cut(s)	914, 1999, 2192
BmgT120I	GGNCC	3 cut(s)	325, 1435, 1763
BmiI	GGNNCC	4 cut(s)	1374, 1436, 1437, 1764
BmrFI	CCNGG	6 cut(s)	38, 703, 859, 1190, 1347, 1530
BmrI	ACTGGG	2 cut(s)	2169, 2300
BmtI	GCTAGC	1 cut(s)	546
BmuI	ACTGGG	2 cut(s)	2169, 2300
BpiI	GAAGAC	1 cut(s)	402
BpmI	CTGGAG	2 cut(s)	685, 841
BpuMI	CCSGG	2 cut(s)	38, 1190
BsaAI	YACGTR	3 cut(s)	1542, 2168, 2185
BsaBI	GATNNNNATC	1 cut(s)	1420
BsaHI	GRCGYC	1 cut(s)	408
BsaJI	CCNNGG	6 cut(s)	702, 858, 1086, 1346, 1529, 2116
BsaXI	ACNNNNNCTCC	4 cut(s)	90, 120, 200, 230
Bsc4I	CCNNNNNNNGG	3 cut(s)	506, 1450, 2118
Bse1I	ACTGG	6 cut(s)	144, 1108, 1220, 1281, 2175, 2306
Bse8I	GATNNNNATC	1 cut(s)	1420
BseBI	CCWGG	4 cut(s)	703, 859, 1347, 1530
BseDI	CCNNGG	6 cut(s)	702, 858, 1086, 1346, 1529, 2116
BseGI	GGATG	5 cut(s)	409, 439, 1066, 1145, 1603
BseJI	GATNNNNATC	1 cut(s)	1420
BseLI	CCNNNNNNNGG	3 cut(s)	506, 1450, 2118
BseMII	CTCAG	5 cut(s)	988, 1321, 1409, 1836, 2081
BseNI	ACTGG	6 cut(s)	144, 1108, 1220, 1281, 2175, 2306
BseRI	GAGGAG	4 cut(s)	114, 129, 213, 993
BseSI	GKGCMC	1 cut(s)	1776
BseXI	GCAGC	4 cut(s)	382, 679, 1649, 2002
BseYI	CCCAGC	1 cut(s)	1482
BsgI	GTGCAG	2 cut(s)	1659, 2001
Bsh1236I	CGCG	2 cut(s)	286, 664
BshFI	GGCC	2 cut(s)	326, 1163
BshNI	GGYRCC	1 cut(s)	1372
BsiHKAI	GWGCWC	4 cut(s)	16, 155, 1776, 2154
BsiHKCI	CYCGRG	2 cut(s)	1014, 1767
BsiSI	CCGG	3 cut(s)	38, 1117, 1190
BslFI	GGGAC	6 cut(s)	768, 924, 1274, 1421, 1776, 2303
BslI	CCNNNNNNNGG	3 cut(s)	506, 1450, 2118
BsmAI	GTCTC	7 cut(s)	834, 1094, 1310, 1347, 1841, 1931, 2182
BsmBI	CGTCTC	3 cut(s)	1310, 1347, 2182
BsmFI	GGGAC	6 cut(s)	768, 924, 1274, 1421, 1776, 2303
BsnI	GGCC	2 cut(s)	326, 1163
BsoBI	CYCGRG	2 cut(s)	1014, 1767
Bsp1286I	GDGCHC	4 cut(s)	16, 155, 1776, 2154
Bsp143I	GATC	6 cut(s)	503, 983, 1183, 1262, 1415, 2140
BspACI	CCGC	9 cut(s)	20, 79, 96, 197, 227, 431, 553, 664, 1969
BspANI	GGCC	2 cut(s)	326, 1163
BspCNI	CTCAG	5 cut(s)	987, 1320, 1408, 1837, 2080
BspFNI	CGCG	2 cut(s)	286, 664
BspHI	TCATGA	1 cut(s)	2311
BspLI	GGNNCC	4 cut(s)	1374, 1436, 1437, 1764
BspMAI	CTGCAG	2 cut(s)	520, 1384
BspOI	GCTAGC	1 cut(s)	546
BspPI	GGATC	2 cut(s)	991, 1270
BspQI	GCTCTTC	1 cut(s)	1311
BspT107I	GGYRCC	1 cut(s)	1372
BsrI	ACTGG	6 cut(s)	144, 1108, 1220, 1281, 2175, 2306
BssECI	CCNNGG	6 cut(s)	702, 858, 1086, 1346, 1529, 2116
BssMI	GATC	6 cut(s)	503, 983, 1183, 1262, 1415, 2140
BssNI	GRCGYC	1 cut(s)	408
BssSI	CACGAG	1 cut(s)	1356
BssT1I	CCWWGG	1 cut(s)	1086
Bst2BI	CACGAG	1 cut(s)	1356
Bst2UI	CCWGG	4 cut(s)	703, 859, 1347, 1530
Bst4CI	ACNGT	6 cut(s)	1412, 1680, 1778, 1814, 1992, 2088
Bst6I	CTCTTC	6 cut(s)	253, 568, 850, 1311, 1666, 1791
BstACI	GRCGYC	1 cut(s)	408
BstBAI	YACGTR	3 cut(s)	1542, 2168, 2185
BstC8I	GCNNGC	2 cut(s)	483, 544
BstDEI	CTNAG	5 cut(s)	974, 1307, 1395, 1845, 2067
BstDSI	CCRYGG	1 cut(s)	2116
BstEII	GGTNACC	1 cut(s)	2300
BstENI	CCTNNNNNAGG	1 cut(s)	504
BstF5I	GGATG	5 cut(s)	409, 439, 1066, 1145, 1603
BstFNI	CGCG	2 cut(s)	286, 664
BstKTI	GATC	6 cut(s)	506, 986, 1186, 1265, 1418, 2143
BstMAI	GTCTC	7 cut(s)	834, 1094, 1310, 1347, 1841, 1931, 2182
BstMBI	GATC	6 cut(s)	503, 983, 1183, 1262, 1415, 2140
BstMWI	GCNNNNNNNGC	6 cut(s)	116, 367, 491, 1113, 1388, 2213
BstNI	CCWGG	4 cut(s)	703, 859, 1347, 1530
BstNSI	RCATGY	2 cut(s)	1944, 2050
BstPI	GGTNACC	1 cut(s)	2300
BstSCI	CCNGG	6 cut(s)	36, 701, 857, 1188, 1345, 1528
BstSFI	CTRYAG	4 cut(s)	516, 1380, 1411, 1813
BstSLI	GKGCMC	1 cut(s)	1776
BstUI	CGCG	2 cut(s)	286, 664
BstV1I	GCAGC	4 cut(s)	382, 679, 1649, 2002
BstV2I	GAAGAC	1 cut(s)	402
BsuI	GTATCC	1 cut(s)	1084
BsuRI	GGCC	2 cut(s)	326, 1163
BtgI	CCRYGG	1 cut(s)	2116
BtrI	CACGTC	3 cut(s)	914, 1999, 2192
BtsCI	GGATG	5 cut(s)	409, 439, 1066, 1145, 1603
BtsIMutI	CAGTG	7 cut(s)	137, 199, 954, 1274, 2084, 2100, 2182
Cac8I	GCNNGC	2 cut(s)	483, 544
CaiI	CAGNNNCTG	1 cut(s)	266
CciI	TCATGA	1 cut(s)	2311
Cfr13I	GGNCC	3 cut(s)	325, 1435, 1763
CseI	GACGC	2 cut(s)	416, 1292
Csp6I	GTAC	2 cut(s)	1373, 1543
CviAII	CATG	6 cut(s)	758, 1941, 2012, 2047, 2144, 2312
CviQI	GTAC	2 cut(s)	1373, 1543
DdeI	CTNAG	5 cut(s)	974, 1307, 1395, 1845, 2067
DpnI	GATC	6 cut(s)	505, 985, 1185, 1264, 1417, 2142
DpnII	GATC	6 cut(s)	503, 983, 1183, 1262, 1415, 2140
Eam1104I	CTCTTC	6 cut(s)	253, 568, 850, 1311, 1666, 1791
EarI	CTCTTC	6 cut(s)	253, 568, 850, 1311, 1666, 1791
EciI	GGCGGA	2 cut(s)	111, 216
Ecl136II	GAGCTC	2 cut(s)	14, 153
Eco130I	CCWWGG	1 cut(s)	1086
Eco147I	AGGCCT	1 cut(s)	1163
Eco24I	GRGCYC	2 cut(s)	16, 155
Eco47I	GGWCC	2 cut(s)	1435, 1763
Eco53kI	GAGCTC	2 cut(s)	14, 153
Eco57I	CTGAAG	2 cut(s)	1453, 1865
Eco72I	CACGTG	1 cut(s)	2168
Eco88I	CYCGRG	2 cut(s)	1014, 1767
Eco91I	GGTNACC	1 cut(s)	2300
EcoICRI	GAGCTC	2 cut(s)	14, 153
EcoNI	CCTNNNNNAGG	1 cut(s)	504
EcoO109I	RGGNCCY	2 cut(s)	1435, 1763
EcoO65I	GGTNACC	1 cut(s)	2300
EcoRI	GAATTC	1 cut(s)	2054
EcoRII	CCWGG	4 cut(s)	701, 857, 1345, 1528
EcoT14I	CCWWGG	1 cut(s)	1086
EcoT38I	GRGCYC	2 cut(s)	16, 155
ErhI	CCWWGG	1 cut(s)	1086
Esp3I	CGTCTC	3 cut(s)	1310, 1347, 2182
FaeI	CATG	6 cut(s)	761, 1944, 2015, 2050, 2147, 2315
FalI	AAGNNNNNCTT	6 cut(s)	829, 861, 1305, 1337, 1788, 1820
FaqI	GGGAC	6 cut(s)	768, 924, 1274, 1421, 1776, 2303
FatI	CATG	6 cut(s)	757, 1940, 2011, 2046, 2143, 2311
FauI	CCCGC	2 cut(s)	546, 1962
FauNDI	CATATG	1 cut(s)	375
FbaI	TGATCA	1 cut(s)	2140
Fnu4HI	GCNGC	5 cut(s)	198, 371, 693, 1638, 2016
FokI	GGATG	5 cut(s)	416, 446, 1073, 1152, 1610
FriOI	GRGCYC	2 cut(s)	16, 155
Fsp4HI	GCNGC	5 cut(s)	198, 371, 693, 1638, 2016
FspBI	CTAG	7 cut(s)	111, 501, 543, 561, 1095, 1487, 2217
GluI	GCNGC	5 cut(s)	198, 371, 693, 1638, 2016
GsaI	CCCAGC	1 cut(s)	1486
GsuI	CTGGAG	2 cut(s)	685, 841
HaeIII	GGCC	2 cut(s)	326, 1163
HapII	CCGG	3 cut(s)	38, 1117, 1190
HgaI	GACGC	2 cut(s)	416, 1292
Hin1I	GRCGYC	1 cut(s)	408
Hin1II	CATG	6 cut(s)	761, 1944, 2015, 2050, 2147, 2315
HincII	GTYRAC	2 cut(s)	1510, 1810
HindII	GTYRAC	2 cut(s)	1510, 1810
HindIII	AAGCTT	1 cut(s)	921
HpaII	CCGG	3 cut(s)	38, 1117, 1190
HphI	GGTGA	4 cut(s)	725, 1037, 1209, 2294
Hpy166II	GTNNAC	6 cut(s)	639, 954, 1510, 1774, 1810, 2337
Hpy8I	GTNNAC	6 cut(s)	639, 954, 1510, 1774, 1810, 2337
Hpy99I	CGWCG	2 cut(s)	164, 1625
HpyCH4III	ACNGT	6 cut(s)	1412, 1680, 1778, 1814, 1992, 2088
HpyCH4IV	ACGT	7 cut(s)	913, 1512, 1541, 1998, 2167, 2184, 2191
HpyF10VI	GCNNNNNNNGC	6 cut(s)	116, 367, 491, 1113, 1388, 2213
HpyF3I	CTNAG	5 cut(s)	974, 1307, 1395, 1845, 2067
HpySE526I	ACGT	7 cut(s)	913, 1512, 1541, 1998, 2167, 2184, 2191
Hsp92I	GRCGYC	1 cut(s)	408
Hsp92II	CATG	6 cut(s)	761, 1944, 2015, 2050, 2147, 2315
KflI	GGGWCCC	1 cut(s)	1435
KpnI	GGTACC	1 cut(s)	1376
Ksp22I	TGATCA	1 cut(s)	2140
Kzo9I	GATC	6 cut(s)	503, 983, 1183, 1262, 1415, 2140
LguI	GCTCTTC	1 cut(s)	1311
LmnI	GCTCC	3 cut(s)	19, 116, 226
Lsp1109I	GCAGC	4 cut(s)	382, 679, 1649, 2002
MaeI	CTAG	7 cut(s)	111, 501, 543, 561, 1095, 1487, 2217
MaeII	ACGT	7 cut(s)	913, 1512, 1541, 1998, 2167, 2184, 2191
MaeIII	GTNAC	8 cut(s)	89, 355, 380, 1456, 1669, 1690, 2168, 2300
MalI	GATC	6 cut(s)	505, 985, 1185, 1264, 1417, 2142
MboI	GATC	6 cut(s)	503, 983, 1183, 1262, 1415, 2140
MhlI	GDGCHC	4 cut(s)	16, 155, 1776, 2154
MlyI	GAGTC	5 cut(s)	388, 575, 836, 966, 2039
MroXI	GAANNNNTTC	4 cut(s)	215, 280, 1320, 1800
MseI	TTAA	6 cut(s)	30, 320, 798, 1166, 1580, 1965
MslI	CAYNNNNRTG	1 cut(s)	2243
MspI	CCGG	3 cut(s)	38, 1117, 1190
MspR9I	CCNGG	6 cut(s)	38, 703, 859, 1190, 1347, 1530
MvaI	CCWGG	4 cut(s)	703, 859, 1347, 1530
MvnI	CGCG	2 cut(s)	286, 664
MwoI	GCNNNNNNNGC	6 cut(s)	116, 367, 491, 1113, 1388, 2213
NciI	CCSGG	2 cut(s)	38, 1190
NdeI	CATATG	1 cut(s)	375
NdeII	GATC	6 cut(s)	503, 983, 1183, 1262, 1415, 2140
NheI	GCTAGC	1 cut(s)	542
NlaIII	CATG	6 cut(s)	761, 1944, 2015, 2050, 2147, 2315
NlaIV	GGNNCC	4 cut(s)	1374, 1436, 1437, 1764
NmeAIII	GCCGAG	1 cut(s)	109
NmuCI	GTSAC	4 cut(s)	380, 1456, 2168, 2300
NspI	RCATGY	2 cut(s)	1944, 2050
PaeR7I	CTCGAG	1 cut(s)	1767
PagI	TCATGA	1 cut(s)	2311
PceI	AGGCCT	1 cut(s)	1163
PciI	ACATGT	1 cut(s)	1940
PciSI	GCTCTTC	1 cut(s)	1311
PcsI	WCGNNNNNNNCGW	2 cut(s)	168, 1774
PdmI	GAANNNNTTC	4 cut(s)	215, 280, 1320, 1800
PfeI	GAWTC	7 cut(s)	164, 180, 253, 263, 557, 743, 818
PkrI	GCNGC	5 cut(s)	199, 372, 694, 1639, 2017
PleI	GAGTC	5 cut(s)	387, 574, 836, 966, 2038
PmaCI	CACGTG	1 cut(s)	2168
PmlI	CACGTG	1 cut(s)	2168
PpsI	GAGTC	5 cut(s)	387, 574, 836, 966, 2038
Ppu21I	YACGTR	3 cut(s)	1542, 2168, 2185
PpuMI	RGGWCCY	2 cut(s)	1435, 1763
PscI	ACATGT	1 cut(s)	1940
PsiI	TTATAA	1 cut(s)	939
Psp124BI	GAGCTC	2 cut(s)	16, 155
Psp5II	RGGWCCY	2 cut(s)	1435, 1763
Psp6I	CCWGG	4 cut(s)	701, 857, 1345, 1528
PspCI	CACGTG	1 cut(s)	2168
PspEI	GGTNACC	1 cut(s)	2300
PspFI	CCCAGC	1 cut(s)	1482
PspGI	CCWGG	4 cut(s)	701, 857, 1345, 1528
PspN4I	GGNNCC	4 cut(s)	1374, 1436, 1437, 1764
PspPI	GGNCC	3 cut(s)	325, 1435, 1763
PspPPI	RGGWCCY	2 cut(s)	1435, 1763
PspXI	VCTCGAGB	1 cut(s)	1767
PstI	CTGCAG	2 cut(s)	520, 1384
PstNI	CAGNNNCTG	1 cut(s)	266
RsaI	GTAC	2 cut(s)	1374, 1544
RsaNI	GTAC	2 cut(s)	1373, 1543
RseI	CAYNNNNRTG	1 cut(s)	2243
SacI	GAGCTC	2 cut(s)	16, 155
SapI	GCTCTTC	1 cut(s)	1311
SaqAI	TTAA	6 cut(s)	30, 320, 798, 1166, 1580, 1965
SatI	GCNGC	5 cut(s)	198, 371, 693, 1638, 2016
Sau3AI	GATC	6 cut(s)	503, 983, 1183, 1262, 1415, 2140
Sau96I	GGNCC	3 cut(s)	325, 1435, 1763
SchI	GAGTC	5 cut(s)	388, 575, 836, 966, 2039
ScrFI	CCNGG	6 cut(s)	38, 703, 859, 1190, 1347, 1530
SduI	GDGCHC	4 cut(s)	16, 155, 1776, 2154
SfcI	CTRYAG	4 cut(s)	516, 1380, 1411, 1813
Sfr274I	CTCGAG	1 cut(s)	1767
SinI	GGWCC	2 cut(s)	1435, 1763
SlaI	CTCGAG	1 cut(s)	1767
SmiMI	CAYNNNNRTG	1 cut(s)	2243
SmlI	CTYRAG	1 cut(s)	1767
SmoI	CTYRAG	1 cut(s)	1767
SseBI	AGGCCT	1 cut(s)	1163
SsiI	CCGC	9 cut(s)	20, 79, 96, 197, 227, 431, 553, 664, 1969
SspMI	CTAG	7 cut(s)	111, 501, 543, 561, 1095, 1487, 2217
SstI	GAGCTC	2 cut(s)	16, 155
StuI	AGGCCT	1 cut(s)	1163
StyD4I	CCNGG	6 cut(s)	36, 701, 857, 1188, 1345, 1528
StyI	CCWWGG	1 cut(s)	1086
TaaI	ACNGT	6 cut(s)	1412, 1680, 1778, 1814, 1992, 2088
TaiI	ACGT	7 cut(s)	916, 1515, 1544, 2001, 2170, 2187, 2194
TaqI	TCGA	8 cut(s)	149, 251, 290, 790, 946, 1448, 1768, 1794
TauI	GCSGC	1 cut(s)	200
TfiI	GAWTC	7 cut(s)	164, 180, 253, 263, 557, 743, 818
Tru1I	TTAA	6 cut(s)	30, 320, 798, 1166, 1580, 1965
Tru9I	TTAA	6 cut(s)	30, 320, 798, 1166, 1580, 1965
TscAI	CASTG	7 cut(s)	144, 199, 961, 1281, 2091, 2107, 2182
TseFI	GTSAC	4 cut(s)	380, 1456, 2168, 2300
TseI	GCWGC	4 cut(s)	370, 692, 1637, 2015
Tsp45I	GTSAC	4 cut(s)	380, 1456, 2168, 2300
TspGWI	ACGGA	4 cut(s)	192, 246, 1433, 2287
TspRI	CASTG	7 cut(s)	144, 199, 961, 1281, 2091, 2107, 2182
VneI	GTGCAC	1 cut(s)	1772
VpaK11BI	GGWCC	2 cut(s)	1435, 1763
XagI	CCTNNNNNAGG	1 cut(s)	504
XapI	RAATTY	7 cut(s)	1177, 1492, 1560, 1576, 1648, 2054, 2080
XbaI	TCTAGA	1 cut(s)	560
XceI	RCATGY	2 cut(s)	1944, 2050
XhoI	CTCGAG	1 cut(s)	1767
XmnI	GAANNNNTTC	4 cut(s)	215, 280, 1320, 1800
XspI	CTAG	7 cut(s)	111, 501, 543, 561, 1095, 1487, 2217

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.