Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0004792

Physical Location & Seq

Genomic Coordinates Forward (+)

59547992 .. 59553220

Gene Structure 5229 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG279700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGCTGGGTAAAGCTCCTGCTCCAGTAGTAAACCACCTATGGCCGAAACGCATTGACCCAGAATGGATGGTGGCTCAGCACCACTGCAGGTGTACTGTCCACCCCCATCAGATTAGAAAATGGGGAATAAGTTGCAGTTTGGGTCAGAAAGCCATGGATAACTCTGCTGCTGCTTATGACCTTATGGATGATTTCATTGTATTGGGAGCAACCAAGAATGACTCTTCTGTAGTCCGTGACTCTCCCAAAACCAATACCAGAGATAATGACCGTCAACAGGCGGCAACTACTAGGAGAGTTGCCAAAGTTGGCGGAAGTTTTGGGAGATTGAAAGTGCAAAGAGTGAAATCTGTAGTGGATAAAGCTTCTCGGGTGAAGCGAGACATGGATGAAAGTGACAATGAACTAGATGTGCAGGATACATCACCATTTATCTCTACAATTGAAGGTATGGGGAAGAAGAAGAAAGCAAATGCCATGAGTCGTGGAGGTAGACTTTCGAATCCTTCCAACTCACATGAATTTAGGGACGCATTGCGTAAGAAGGAACCAACAGATTACAAGGACAATTCTAGAGTAACTACGAAAGATTTTTTTGAGCCACTCCCTGAGAGTCGGCATAAACCATATATGCGTCAGAAGCCTAACACCATCGTAGACCGACGAAAGGTCTCAGTTTCAAGAAAAGGATGGGGTAGTGGAGGGTCCATACGTGAATCATCGGAGTATCCAGACCCAGACCAACGAAGGAGAGTGTCCAATGATGGTGGCTTTTTCAGTCGAAAATCCTTTAGGGATGTGGGATGCAGTGAGTATATGATTGAATGTCTAAGGAAGCAGCTTTTCCAGCGTCCATCACATATTCAGGCCATGGCGTTTGCTCCAGTTGTTGCTGGAAAAACCTCTATTATAGCTGACCAAAGTGGATCTGGCAAAACATTGGCTTATCTTGCTCCTGTCATTCAGCGTTTAAGGGATGAAGAACTTCAAGGACTGAGCAAGTCCTCATCACAGAGTCCTCGATTAGTTGTATTAGTTCCGACTGCTGAATTGGCTTCTCAGGTTTTGGGTAATTGCCGATCAATATCAAAATTTGGAGTTCCTGTCAGGTCTATGGTTGTAACAGGCGGTCATCGACAGAAAACTCAGCTGGAAAGTTTGCAAGAAGGTGTTGATGTTCTAATTGCAACCCCAGGTCGATTTATATATCTAATTAAGGAGGGCTTCTTGCAATTGTCAAATCTAAGATGTGCTGTGCTGGATGAGGTAGATATACTCTTTAATGATGAGGATTTTGAAGCAGCACTGCAAAGTTTAATCAATTCCGCACCTGTAACCACACAATATCTTTTTGTCACTGCAACTTTACCACTTGGCATTTACAACAAGTTAGTTGAAGATTTTCCTGATTGTCAAGTGGTCATGGCACCTGGAATGCACCGGATAAGCCCTGGCCTTGAAGAGGTACTTGTAGATTGCAGTGGAGATGATCGGAGTGAAAAATCTCCAGAGATGGCATTCACAAATAAGAAATCTGCTCTTCTACAGCTTGTGGAGGGAAGTCCAGTTCCCAAAACAATAGTCTTTTGTAATAAGGTAAGGTGGGAGGATTTACTTTTGTGGTTTACACCGGTTGTCCCTGTGTGCTATTTACAAGCATTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006968 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0009753 GO:0009814 GO:0009817 GO:0009987 GO:0010033 GO:0010501 GO:0014070 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0032870 GO:0034641 GO:0035690 GO:0042221 GO:0042493 GO:0042623 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046483 GO:0046677 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0070013 GO:0070035 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071369 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0090304 GO:0098542 GO:0140098 GO:1901360 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

554

Amino Acids

61.84

Weight (kDa)

9.13

Isoelectric Point (pI)

57.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	287 - 457	5.4e-33	DEAD/DEAH box helicase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004792)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06980
fragaria_vesca	FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860
malus_domestica	MD16G1131600.v1.1
prunus_persica	Prupe.1G209200_v2.0.a1
pyrus_communis	pycom16g11600
rosa_chinensis	RchiOBHm_Chr4g0410871 RchiOBHm_Chr4g0428121
rosa_laevigata	RLG00000007180 RLG00000008393
rosa_multiflora	Rmu_sc0004940.1_g000014 Rmu_sc0007108.1_g000006 Rmu_sc0009599.1_g000014
rosa_roxburghii	Rroxscaffold_5G00369830
rosa_rugosa	Rorug04G0222400
rosa_samantha	Rh4AG163400 Rh4AG279700 Rh4BG285100 Rh4CG176300 Rh4CG300700 Rh4DG159100 Rh4DG282200
rosa_wichuraiana	Rw0G005430 Rw4G024300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	78
Acc36I	ACCTGC	1 cut(s)	78
AccB1I	GGYRCC	1 cut(s)	1426
AccI	GTMKAC	2 cut(s)	493, 657
AciI	CCGC	4 cut(s)	281, 312, 1128, 1326
AclWI	GGATC	1 cut(s)	934
AcoI	YGGCCR	1 cut(s)	41
AcsI	RAATTY	2 cut(s)	521, 1091
AfaI	GTAC	2 cut(s)	94, 1467
AfiI	CCNNNNNNNGG	3 cut(s)	277, 667, 1462
AgeI	ACCGGT	1 cut(s)	1630
AgsI	TTSAA	8 cut(s)	331, 446, 681, 824, 989, 1298, 1397, 1460
AhdI	GACNNNNNGTC	1 cut(s)	668
AjnI	CCWGG	3 cut(s)	1192, 1429, 1450
AloI	GAACNNNNNNTCC	2 cut(s)	1551, 1583
AluBI	AGCT	6 cut(s)	14, 365, 841, 914, 1150, 1549
AluI	AGCT	6 cut(s)	14, 365, 841, 914, 1150, 1549
Alw26I	GTCTC	2 cut(s)	375, 676
AlwI	GGATC	1 cut(s)	934
Ama87I	CYCGRG	1 cut(s)	369
AoxI	GGCC	3 cut(s)	41, 867, 1453
ApeKI	GCWGC	4 cut(s)	167, 170, 838, 1301
ApoI	RAATTY	2 cut(s)	521, 1091
ArsI	GACNNNNNNTTYG	2 cut(s)	1566, 1598
AsiGI	ACCGGT	1 cut(s)	1630
Asp700I	GAANNNNTTC	2 cut(s)	984, 1401
AspS9I	GGNCC	1 cut(s)	705
AsuHPI	GGTGA	2 cut(s)	385, 417
AsuII	TTCGAA	1 cut(s)	500
AvaI	CYCGRG	1 cut(s)	369
AvaII	GGWCC	1 cut(s)	705
BanI	GGYRCC	1 cut(s)	1426
BbvI	GCAGC	4 cut(s)	154, 157, 850, 1313
BccI	CCATC	7 cut(s)	61, 114, 659, 684, 758, 862, 1507
BciT130I	CCWGG	3 cut(s)	1194, 1431, 1452
BciVI	GTATCC	2 cut(s)	412, 738
BcoDI	GTCTC	2 cut(s)	375, 676
BfaI	CTAG	3 cut(s)	291, 407, 573
BfmI	CTRYAG	4 cut(s)	85, 228, 351, 1544
BfuAI	ACCTGC	1 cut(s)	78
BfuI	GTATCC	2 cut(s)	412, 738
BisI	GCNGC	5 cut(s)	168, 171, 282, 839, 1302
BlpI	GCTNAGC	1 cut(s)	75
BlsI	GCNGC	5 cut(s)	169, 172, 283, 840, 1303
Bme1390I	CCNGG	3 cut(s)	1194, 1431, 1452
Bme18I	GGWCC	1 cut(s)	705
BmeRI	GACNNNNNGTC	1 cut(s)	668
BmeT110I	CYCGRG	1 cut(s)	369
BmgT120I	GGNCC	1 cut(s)	705
BmiI	GGNNCC	3 cut(s)	549, 706, 1428
BmrFI	CCNGG	3 cut(s)	1194, 1431, 1452
BmsI	GCATC	1 cut(s)	794
BpmI	CTGGAG	3 cut(s)	6, 867, 1491
Bpu1102I	GCTNAGC	1 cut(s)	75
Bpu14I	TTCGAA	1 cut(s)	500
BsaAI	YACGTR	1 cut(s)	713
BsaBI	GATNNNNATC	1 cut(s)	1084
BsaI	GGTCTC	1 cut(s)	676
BsaJI	CCNNGG	4 cut(s)	153, 870, 1192, 1450
BsaWI	WCCGGW	2 cut(s)	1440, 1630
BsaXI	ACNNNNNCTCC	2 cut(s)	1089, 1119
Bsc4I	CCNNNNNNNGG	3 cut(s)	277, 667, 1462
Bse118I	RCCGGY	1 cut(s)	1630
Bse1I	ACTGG	3 cut(s)	23, 884, 1565
Bse3DI	GCAATG	1 cut(s)	533
Bse8I	GATNNNNATC	1 cut(s)	1084
BseBI	CCWGG	3 cut(s)	1194, 1431, 1452
BseDI	CCNNGG	4 cut(s)	153, 870, 1192, 1450
BseGI	GGATG	8 cut(s)	72, 193, 394, 695, 802, 809, 982, 1267
BseJI	GATNNNNATC	1 cut(s)	1084
BseLI	CCNNNNNNNGG	3 cut(s)	277, 667, 1462
BseMI	GCAATG	1 cut(s)	533
BseMII	CTCAG	6 cut(s)	89, 600, 687, 986, 1073, 1160
BseNI	ACTGG	3 cut(s)	23, 884, 1565
BseXI	GCAGC	4 cut(s)	154, 157, 850, 1313
BseYI	CCCAGC	1 cut(s)	4
BsgI	GTGCAG	1 cut(s)	434
BshFI	GGCC	3 cut(s)	43, 869, 1455
BshNI	GGYRCC	1 cut(s)	1426
BshTI	ACCGGT	1 cut(s)	1630
BsiHKCI	CYCGRG	1 cut(s)	369
BsiSI	CCGG	2 cut(s)	1441, 1631
BslFI	GGGAC	2 cut(s)	542, 1622
BslI	CCNNNNNNNGG	3 cut(s)	277, 667, 1462
BsmAI	GTCTC	2 cut(s)	375, 676
BsmFI	GGGAC	2 cut(s)	542, 1622
BsmI	GAATGC	3 cut(s)	1440, 1517, 1658
BsnI	GGCC	3 cut(s)	43, 869, 1455
Bso31I	GGTCTC	1 cut(s)	676
BsoBI	CYCGRG	1 cut(s)	369
Bsp119I	TTCGAA	1 cut(s)	500
Bsp143I	GATC	3 cut(s)	926, 1079, 1489
Bsp1720I	GCTNAGC	1 cut(s)	75
Bsp19I	CCATGG	2 cut(s)	153, 870
BspACI	CCGC	4 cut(s)	281, 312, 1128, 1326
BspANI	GGCC	3 cut(s)	43, 869, 1455
BspCNI	CTCAG	6 cut(s)	88, 601, 686, 987, 1072, 1159
BspLI	GGNNCC	3 cut(s)	549, 706, 1428
BspMAI	CTGCAG	1 cut(s)	89
BspMI	ACCTGC	1 cut(s)	78
BspPI	GGATC	1 cut(s)	934
BspQI	GCTCTTC	1 cut(s)	1545
BspT104I	TTCGAA	1 cut(s)	500
BspT107I	GGYRCC	1 cut(s)	1426
BspTNI	GGTCTC	1 cut(s)	676
BsrDI	GCAATG	1 cut(s)	533
BsrFI	RCCGGY	1 cut(s)	1630
BsrI	ACTGG	3 cut(s)	23, 884, 1565
BssAI	RCCGGY	1 cut(s)	1630
BssECI	CCNNGG	4 cut(s)	153, 870, 1192, 1450
BssMI	GATC	3 cut(s)	926, 1079, 1489
BssT1I	CCWWGG	2 cut(s)	153, 870
Bst2UI	CCWGG	3 cut(s)	1194, 1431, 1452
Bst4CI	ACNGT	2 cut(s)	97, 272
Bst6I	CTCTTC	3 cut(s)	229, 1455, 1545
BstBAI	YACGTR	1 cut(s)	713
BstBI	TTCGAA	1 cut(s)	500
BstDEI	CTNAG	8 cut(s)	75, 609, 673, 830, 995, 1059, 1146, 1244
BstDSI	CCRYGG	2 cut(s)	153, 870
BstENI	CCTNNNNNAGG	1 cut(s)	1460
BstF5I	GGATG	8 cut(s)	72, 193, 394, 695, 802, 809, 982, 1267
BstKTI	GATC	3 cut(s)	929, 1082, 1492
BstMAI	GTCTC	2 cut(s)	375, 676
BstMBI	GATC	3 cut(s)	926, 1079, 1489
BstMWI	GCNNNNNNNGC	4 cut(s)	640, 847, 950, 1052
BstNI	CCWGG	3 cut(s)	1194, 1431, 1452
BstSCI	CCNGG	3 cut(s)	1192, 1429, 1450
BstSFI	CTRYAG	4 cut(s)	85, 228, 351, 1544
BstV1I	GCAGC	4 cut(s)	154, 157, 850, 1313
BstX2I	RGATCY	1 cut(s)	926
BstYI	RGATCY	1 cut(s)	926
BsuI	GTATCC	2 cut(s)	412, 738
BsuRI	GGCC	3 cut(s)	43, 869, 1455
BtgI	CCRYGG	2 cut(s)	153, 870
BtsCI	GGATG	8 cut(s)	72, 193, 394, 695, 802, 809, 982, 1267
BtsI	GCAGTG	5 cut(s)	82, 814, 1304, 1356, 1486
BtsIMutI	CAGTG	5 cut(s)	82, 814, 1304, 1356, 1486
BveI	ACCTGC	1 cut(s)	78
Cfr10I	RCCGGY	1 cut(s)	1630
Cfr13I	GGNCC	1 cut(s)	705
CseI	GACGC	3 cut(s)	539, 623, 839
Csp6I	GTAC	2 cut(s)	93, 1466
CspAI	ACCGGT	1 cut(s)	1630
CspCI	CAANNNNNGTGG	2 cut(s)	748, 783
CviAII	CATG	6 cut(s)	154, 385, 478, 518, 871, 1423
CviQI	GTAC	2 cut(s)	93, 1466
DdeI	CTNAG	8 cut(s)	75, 609, 673, 830, 995, 1059, 1146, 1244
DpnI	GATC	3 cut(s)	928, 1081, 1491
DpnII	GATC	3 cut(s)	926, 1079, 1489
DriI	GACNNNNNGTC	1 cut(s)	668
EaeI	YGGCCR	1 cut(s)	41
Eam1104I	CTCTTC	3 cut(s)	229, 1455, 1545
Eam1105I	GACNNNNNGTC	1 cut(s)	668
EarI	CTCTTC	3 cut(s)	229, 1455, 1545
EciI	GGCGGA	1 cut(s)	327
Eco130I	CCWWGG	2 cut(s)	153, 870
Eco31I	GGTCTC	1 cut(s)	676
Eco47I	GGWCC	1 cut(s)	705
Eco88I	CYCGRG	1 cut(s)	369
EcoNI	CCTNNNNNAGG	1 cut(s)	1460
EcoRII	CCWGG	3 cut(s)	1192, 1429, 1450
EcoT14I	CCWWGG	2 cut(s)	153, 870
ErhI	CCWWGG	2 cut(s)	153, 870
FaeI	CATG	6 cut(s)	157, 388, 481, 521, 874, 1426
FalI	AAGNNNNNCTT	4 cut(s)	1208, 1240, 1452, 1484
FaqI	GGGAC	2 cut(s)	542, 1622
FatI	CATG	6 cut(s)	153, 384, 477, 517, 870, 1422
FblI	GTMKAC	2 cut(s)	493, 657
Fnu4HI	GCNGC	5 cut(s)	168, 171, 282, 839, 1302
FokI	GGATG	8 cut(s)	79, 200, 401, 702, 809, 816, 989, 1274
Fsp4HI	GCNGC	5 cut(s)	168, 171, 282, 839, 1302
FspBI	CTAG	3 cut(s)	291, 407, 573
GluI	GCNGC	5 cut(s)	168, 171, 282, 839, 1302
GsaI	CCCAGC	1 cut(s)	8
GsuI	CTGGAG	3 cut(s)	6, 867, 1491
HaeIII	GGCC	3 cut(s)	43, 869, 1455
HapII	CCGG	2 cut(s)	1441, 1631
HgaI	GACGC	3 cut(s)	539, 623, 839
Hin1II	CATG	6 cut(s)	157, 388, 481, 521, 874, 1426
HincII	GTYRAC	1 cut(s)	275
HindII	GTYRAC	1 cut(s)	275
HindIII	AAGCTT	1 cut(s)	363
HinfI	GANTC	7 cut(s)	221, 239, 481, 502, 613, 716, 1015
HpaII	CCGG	2 cut(s)	1441, 1631
HphI	GGTGA	2 cut(s)	385, 417
Hpy166II	GTNNAC	7 cut(s)	31, 93, 100, 275, 494, 658, 1626
Hpy188I	TCNGA	7 cut(s)	111, 147, 639, 724, 1041, 1494, 1664
Hpy188III	TCNNGA	5 cut(s)	573, 681, 731, 1406, 1508
Hpy8I	GTNNAC	7 cut(s)	31, 93, 100, 275, 494, 658, 1626
Hpy99I	CGWCG	1 cut(s)	666
HpyAV	CCTTC	5 cut(s)	440, 516, 538, 741, 1160
HpyCH4III	ACNGT	2 cut(s)	97, 272
HpyCH4IV	ACGT	1 cut(s)	712
HpyF10VI	GCNNNNNNNGC	4 cut(s)	640, 847, 950, 1052
HpyF3I	CTNAG	8 cut(s)	75, 609, 673, 830, 995, 1059, 1146, 1244
HpySE526I	ACGT	1 cut(s)	712
Hsp92II	CATG	6 cut(s)	157, 388, 481, 521, 874, 1426
Kzo9I	GATC	3 cut(s)	926, 1079, 1489
LguI	GCTCTTC	1 cut(s)	1545
LmnI	GCTCC	5 cut(s)	19, 25, 206, 886, 958
Lsp1109I	GCAGC	4 cut(s)	154, 157, 850, 1313
LweI	GCATC	1 cut(s)	794
MaeI	CTAG	3 cut(s)	291, 407, 573
MaeII	ACGT	1 cut(s)	712
MaeIII	GTNAC	6 cut(s)	236, 395, 577, 1120, 1333, 1354
MalI	GATC	3 cut(s)	928, 1081, 1491
MboI	GATC	3 cut(s)	926, 1079, 1489
MboII	GAAGA	8 cut(s)	216, 469, 472, 475, 992, 1409, 1472, 1532
MfeI	CAATTG	2 cut(s)	441, 1232
MflI	RGATCY	1 cut(s)	926
MlyI	GAGTC	5 cut(s)	215, 233, 490, 622, 1024
MmeI	TCCRAC	2 cut(s)	534, 1064
MroXI	GAANNNNTTC	2 cut(s)	984, 1401
MseI	TTAA	4 cut(s)	971, 1215, 1281, 1316
MspA1I	CMGCKG	1 cut(s)	1150
MspI	CCGG	2 cut(s)	1441, 1631
MspR9I	CCNGG	3 cut(s)	1194, 1431, 1452
MunI	CAATTG	2 cut(s)	441, 1232
Mva1269I	GAATGC	3 cut(s)	1440, 1517, 1658
MvaI	CCWGG	3 cut(s)	1194, 1431, 1452
MwoI	GCNNNNNNNGC	4 cut(s)	640, 847, 950, 1052
NcoI	CCATGG	2 cut(s)	153, 870
NdeII	GATC	3 cut(s)	926, 1079, 1489
NlaIII	CATG	6 cut(s)	157, 388, 481, 521, 874, 1426
NlaIV	GGNNCC	3 cut(s)	549, 706, 1428
NmuCI	GTSAC	3 cut(s)	236, 395, 1354
NspV	TTCGAA	1 cut(s)	500
PaqCI	CACCTGC	1 cut(s)	78
PciSI	GCTCTTC	1 cut(s)	1545
PcsI	WCGNNNNNNNCGW	1 cut(s)	376
PctI	GAATGC	3 cut(s)	1440, 1517, 1658
PdmI	GAANNNNTTC	2 cut(s)	984, 1401
PfeI	GAWTC	2 cut(s)	502, 716
PinAI	ACCGGT	1 cut(s)	1630
PkrI	GCNGC	5 cut(s)	169, 172, 283, 840, 1303
PleI	GAGTC	5 cut(s)	215, 233, 489, 621, 1023
PpsI	GAGTC	5 cut(s)	215, 233, 489, 621, 1023
Ppu21I	YACGTR	1 cut(s)	713
Psp6I	CCWGG	3 cut(s)	1192, 1429, 1450
PspFI	CCCAGC	1 cut(s)	4
PspGI	CCWGG	3 cut(s)	1192, 1429, 1450
PspN4I	GGNNCC	3 cut(s)	549, 706, 1428
PspPI	GGNCC	1 cut(s)	705
PstI	CTGCAG	1 cut(s)	89
PsuI	RGATCY	1 cut(s)	926
PvuII	CAGCTG	1 cut(s)	1150
RsaI	GTAC	2 cut(s)	94, 1467
RsaNI	GTAC	2 cut(s)	93, 1466
SapI	GCTCTTC	1 cut(s)	1545
SaqAI	TTAA	4 cut(s)	971, 1215, 1281, 1316
SatI	GCNGC	5 cut(s)	168, 171, 282, 839, 1302
Sau3AI	GATC	3 cut(s)	926, 1079, 1489
Sau96I	GGNCC	1 cut(s)	705
SchI	GAGTC	5 cut(s)	215, 233, 490, 622, 1024
ScrFI	CCNGG	3 cut(s)	1194, 1431, 1452
SfaNI	GCATC	1 cut(s)	794
SfcI	CTRYAG	4 cut(s)	85, 228, 351, 1544
SfuI	TTCGAA	1 cut(s)	500
SinI	GGWCC	1 cut(s)	705
SsiI	CCGC	4 cut(s)	281, 312, 1128, 1326
SspMI	CTAG	3 cut(s)	291, 407, 573
StyD4I	CCNGG	3 cut(s)	1192, 1429, 1450
StyI	CCWWGG	2 cut(s)	153, 870
TaaI	ACNGT	2 cut(s)	97, 272
TaiI	ACGT	1 cut(s)	715
TaqI	TCGA	5 cut(s)	500, 781, 1021, 1135, 1198
TaqII	GACCGA	1 cut(s)	675
TatI	WGTACW	1 cut(s)	92
TauI	GCSGC	1 cut(s)	284
TfiI	GAWTC	2 cut(s)	502, 716
Tru1I	TTAA	4 cut(s)	971, 1215, 1281, 1316
Tru9I	TTAA	4 cut(s)	971, 1215, 1281, 1316
TscAI	CASTG	5 cut(s)	89, 814, 1311, 1363, 1486
TseFI	GTSAC	3 cut(s)	236, 395, 1354
TseI	GCWGC	4 cut(s)	167, 170, 838, 1301
Tsp45I	GTSAC	3 cut(s)	236, 395, 1354
TspDTI	ATGAA	5 cut(s)	184, 405, 417, 534, 993
TspGWI	ACGGA	1 cut(s)	224
TspRI	CASTG	5 cut(s)	89, 814, 1311, 1363, 1486
VpaK11BI	GGWCC	1 cut(s)	705
XagI	CCTNNNNNAGG	1 cut(s)	1460
XapI	RAATTY	2 cut(s)	521, 1091
XbaI	TCTAGA	1 cut(s)	572
XcmI	CCANNNNNNNNNTGG	1 cut(s)	926
XmiI	GTMKAC	2 cut(s)	493, 657
XmnI	GAANNNNTTC	2 cut(s)	984, 1401
XspI	CTAG	3 cut(s)	291, 407, 573

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.