Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0004792

Physical Location & Seq

Genomic Coordinates Forward (+)

50153621 .. 50158367

Gene Structure 4747 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G024300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGCTGGGCAAAGCTCCTGCTCCAGCAGTAAACCACCTATGGCCAAAACGCATTGACCCAGAATGGATGGTGGCTCAGCACCACTGCAGGTGTACTGTCCACCCCCATCAGATTAGAAAATGGGGAATAAGTTGCAGTTTGGGTCAGAAAGCCATGGATAACTCTGCTGCTGCTTATGACCTCATGGATGATTTCATTGTATTGGGTGCAACCAAGAATGACTCTTCAGTAGTCCGTGACTCTCCCAAAACCAATACCAGAGATAATGACCGTCAACAGGCGGCAACTACTAGGAGAGTTGCCAAAGTTGGCGGAGGTTTTGGGAGATTGAAAGTGCAAAGAGTGAAATCTGTAGTGGATAAAGCTTCTCGGGTGAAGCGAGACATGGATGAAAGTGAAAATGAACTAGATGTGCAGGATACATCACCATTTATCTCTACAATTGAAGGTATGGGGAAGAAGAAGAAAGCAAATGCCATGAGTCGTGGAGGGAGACTTTCAAATCCTTCCAACTCACATGAGTTTAGGGACGCATTGCGTAAGAAGGAACCAACAGATTACAAGGAAAATTCTAGAGTAACTACCAAAGATTTTTTTGAGCCACTCCCTGAGAGTCGGCATAAACCATATATGCTTTCAAGAAAAGGATGGGGTAGTGGAGGGTCCATACGTGAATCATCAGAGTATCCAGACCTAGACCAACGAAGGAGAGTGTCCAATGATGGTGGCTTTTTCAGTCGAAAATCCTTTAGGGATGTGGGATGCAGTGAGTATATGATTGAATGTCTAAGGAAGCAGCTTTTCCAGCGTCCATCACATATTCAGGCCATGGCGTTTGCTCCAGTTGTTGCTGGAAAAACCTCTATTATAGCTGACCAAAGTGGATCAGGCAAAACATTGGCTTATCTTGCTCCTGTCATTCAACGTTTAAGGGATGAAGAACTTCAAGGACTGAGCAAGTCCTCATCAAAGAGTCCTCGATTAGTTGTATTAGTTCCGACTGCGGAATTGGCTTCTCAGGTTTTGGGTAATTGCCGATCAATATCAAAATTTGGAGTTCCTGTCAGGTCTATGGTTGTAACAGGCGGTCATCGACAGAAAACTCAGCTGGAAAGTTTGCAAGAAGGTGTTGATGTTCTAATTGCAACCCCAGGTCGATTTATATATCTAATTAAGGAGGGCTTCTTGCAATTGTCAAATCTAAGATGTGCTGTACTGGATGAGGTAGATATACTCTTTAATGATGAGGATTTTGAAGCAGCACTGCAAAGTTTAATCAATTCCGCACCTGTAACCACACAATATCTTTTTGTCACTGCAACTTTACCACTTGGCATTTACAACAAGTTAGTTGAAGATTTTCCTGATTGTCAAGTGGTCATGGCACCTGGAATGCACCGGATAAGCCCTGGCCTTGAAGAGGTACTTGTAGATTGCAGTGGAGATGATCGGAGTGAAAAATCTCCAGAGATGGCATTCACAAATAAGAAATCTGCTCTTCTACAGCTTGTGGAGGGAAGTCCAGTTCCCAAAACAATAGTCTTTTGTAACAAGATTGAGACATGCAGAAAAGTTGAGAATGTACTATCACGCTTTGACAGAAGTGGAACTCGTGTTCAAGTTCTACCATTTCATTCTGCTCTGGCTCAAGAATCACGGCTTGCAAACATGAAGGAGTTCACCAATTCTCATTCAGAGAAAGTAGCACAGTTTTTGGTCTGCACTGATAGAGCATCACGTGGAATCGACTTTCCTCGTGTGGATCATGTTATACTCTTCGACTTCCCTCGCGATCCAAGTGAGTACGTGCGGCGTGTAGGAAGAACTGCCAGGGGCGCTGGTGGAGTGGGCAAGGCATTCATCTTTGTCGTTGGCAAGCAAGTCTCTCTTGCGCGAAGAATAATGGACAGGAACCAAAAAGGTCACCCAGTGCATGATGTACCAGCTGCATACGAGCTTTTGTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006968 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0009753 GO:0009814 GO:0009817 GO:0009987 GO:0010033 GO:0010501 GO:0014070 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0032870 GO:0034641 GO:0035690 GO:0042221 GO:0042493 GO:0042623 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046483 GO:0046677 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0070013 GO:0070035 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071369 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0090304 GO:0098542 GO:0140098 GO:1901360 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

655

Amino Acids

72.98

Weight (kDa)

9.3

Isoelectric Point (pI)

52.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	273 - 443	6.5e-33	DEAD/DEAH box helicase
Helicase_C	PF00271	496 - 611	6.4e-24	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004792)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06980
fragaria_vesca	FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860
malus_domestica	MD16G1131600.v1.1
prunus_persica	Prupe.1G209200_v2.0.a1
pyrus_communis	pycom16g11600
rosa_chinensis	RchiOBHm_Chr4g0410871 RchiOBHm_Chr4g0428121
rosa_laevigata	RLG00000007180 RLG00000008393
rosa_multiflora	Rmu_sc0004940.1_g000014 Rmu_sc0007108.1_g000006 Rmu_sc0009599.1_g000014
rosa_roxburghii	Rroxscaffold_5G00369830
rosa_rugosa	Rorug04G0222400
rosa_samantha	Rh4AG163400 Rh4AG279700 Rh4BG285100 Rh4CG176300 Rh4CG300700 Rh4DG159100 Rh4DG282200
rosa_wichuraiana	Rw0G005430 Rw4G024300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	78
Acc36I	ACCTGC	1 cut(s)	78
AccB1I	GGYRCC	1 cut(s)	1384
AccII	CGCG	2 cut(s)	1791, 1894
AciI	CCGC	6 cut(s)	281, 312, 1004, 1086, 1284, 1810
AclI	AACGTT	1 cut(s)	925
AclWI	GGATC	3 cut(s)	892, 1770, 1787
AcoI	YGGCCR	1 cut(s)	41
AcsI	RAATTY	2 cut(s)	568, 1049
AcuI	CTGAAG	1 cut(s)	210
AcvI	CACGTG	1 cut(s)	1739
AdeI	CACNNNGTG	1 cut(s)	1930
AfaI	GTAC	6 cut(s)	94, 1215, 1425, 1584, 1805, 1941
AfiI	CCNNNNNNNGG	2 cut(s)	277, 1420
AjnI	CCWGG	4 cut(s)	1150, 1387, 1408, 1829
AloI	GAACNNNNNNTCC	4 cut(s)	1509, 1541, 1599, 1631
AluBI	AGCT	8 cut(s)	14, 365, 799, 872, 1108, 1507, 1946, 1957
AluI	AGCT	8 cut(s)	14, 365, 799, 872, 1108, 1507, 1946, 1957
Alw26I	GTCTC	4 cut(s)	375, 487, 1553, 1888
AlwI	GGATC	3 cut(s)	892, 1770, 1787
Ama87I	CYCGRG	1 cut(s)	369
AoxI	GGCC	3 cut(s)	41, 825, 1411
ApeKI	GCWGC	5 cut(s)	167, 170, 796, 1259, 1946
ApoI	RAATTY	2 cut(s)	568, 1049
ArsI	GACNNNNNNTTYG	2 cut(s)	1524, 1556
Asp700I	GAANNNNTTC	3 cut(s)	942, 1359, 1676
AspLEI	GCGC	2 cut(s)	1838, 1894
AspS9I	GGNCC	1 cut(s)	663
AsuHPI	GGTGA	4 cut(s)	385, 417, 1672, 1916
AvaI	CYCGRG	1 cut(s)	369
AvaII	GGWCC	1 cut(s)	663
BalI	TGGCCA	1 cut(s)	43
BanI	GGYRCC	1 cut(s)	1384
BauI	CACGAG	2 cut(s)	1611, 1755
BbrPI	CACGTG	1 cut(s)	1739
BbvI	GCAGC	5 cut(s)	154, 157, 808, 1271, 1933
BccI	CCATC	6 cut(s)	61, 114, 642, 716, 820, 1465
BceAI	ACGGC	1 cut(s)	1673
BciT130I	CCWGG	4 cut(s)	1152, 1389, 1410, 1831
BciVI	GTATCC	2 cut(s)	412, 696
BcoDI	GTCTC	4 cut(s)	375, 487, 1553, 1888
BfaI	CTAG	4 cut(s)	291, 407, 573, 695
BfmI	CTRYAG	3 cut(s)	85, 351, 1502
BfoI	RGCGCY	1 cut(s)	1839
BfuAI	ACCTGC	1 cut(s)	78
BfuI	GTATCC	2 cut(s)	412, 696
BisI	GCNGC	7 cut(s)	168, 171, 282, 797, 1260, 1811, 1947
BlpI	GCTNAGC	1 cut(s)	75
BlsI	GCNGC	7 cut(s)	169, 172, 283, 798, 1261, 1812, 1948
Bme1390I	CCNGG	4 cut(s)	1152, 1389, 1410, 1831
Bme18I	GGWCC	1 cut(s)	663
BmeT110I	CYCGRG	1 cut(s)	369
BmgT120I	GGNCC	1 cut(s)	663
BmiI	GGNNCC	4 cut(s)	549, 664, 1386, 1913
BmrFI	CCNGG	4 cut(s)	1152, 1389, 1410, 1831
BmrI	ACTGGG	1 cut(s)	1922
BmsI	GCATC	2 cut(s)	752, 1742
BmuI	ACTGGG	1 cut(s)	1922
BpmI	CTGGAG	3 cut(s)	6, 825, 1449
Bpu1102I	GCTNAGC	1 cut(s)	75
BpuEI	CTTGAG	1 cut(s)	1632
BsaAI	YACGTR	3 cut(s)	671, 1739, 1807
BsaBI	GATNNNNATC	1 cut(s)	1042
BsaJI	CCNNGG	5 cut(s)	153, 828, 1150, 1408, 1830
BsaWI	WCCGGW	1 cut(s)	1398
BsaXI	ACNNNNNCTCC	2 cut(s)	1047, 1077
Bsc4I	CCNNNNNNNGG	2 cut(s)	277, 1420
Bse1I	ACTGG	4 cut(s)	842, 1221, 1523, 1928
Bse3DI	GCAATG	1 cut(s)	533
Bse8I	GATNNNNATC	1 cut(s)	1042
BseBI	CCWGG	4 cut(s)	1152, 1389, 1410, 1831
BseDI	CCNNGG	5 cut(s)	153, 828, 1150, 1408, 1830
BseGI	GGATG	8 cut(s)	72, 193, 394, 653, 760, 767, 940, 1225
BseJI	GATNNNNATC	1 cut(s)	1042
BseLI	CCNNNNNNNGG	2 cut(s)	277, 1420
BseMI	GCAATG	1 cut(s)	533
BseMII	CTCAG	5 cut(s)	89, 600, 944, 1031, 1118
BseNI	ACTGG	4 cut(s)	842, 1221, 1523, 1928
BseXI	GCAGC	5 cut(s)	154, 157, 808, 1271, 1933
BseYI	CCCAGC	1 cut(s)	4
BsgI	GTGCAG	2 cut(s)	434, 1705
Bsh1236I	CGCG	2 cut(s)	1791, 1894
BshFI	GGCC	3 cut(s)	43, 827, 1413
BshNI	GGYRCC	1 cut(s)	1384
BsiHKCI	CYCGRG	1 cut(s)	369
BsiSI	CCGG	1 cut(s)	1399
BslFI	GGGAC	1 cut(s)	542
BslI	CCNNNNNNNGG	2 cut(s)	277, 1420
BsmAI	GTCTC	4 cut(s)	375, 487, 1553, 1888
BsmFI	GGGAC	1 cut(s)	542
BsmI	GAATGC	3 cut(s)	1398, 1475, 1856
BsnI	GGCC	3 cut(s)	43, 827, 1413
BsoBI	CYCGRG	1 cut(s)	369
Bsp143I	GATC	5 cut(s)	884, 1037, 1447, 1762, 1792
Bsp1720I	GCTNAGC	1 cut(s)	75
Bsp19I	CCATGG	2 cut(s)	153, 828
Bsp68I	TCGCGA	1 cut(s)	1791
BspACI	CCGC	6 cut(s)	281, 312, 1004, 1086, 1284, 1810
BspANI	GGCC	3 cut(s)	43, 827, 1413
BspCNI	CTCAG	5 cut(s)	88, 601, 945, 1030, 1117
BspFNI	CGCG	2 cut(s)	1791, 1894
BspLI	GGNNCC	4 cut(s)	549, 664, 1386, 1913
BspMAI	CTGCAG	1 cut(s)	89
BspMI	ACCTGC	1 cut(s)	78
BspPI	GGATC	3 cut(s)	892, 1770, 1787
BspQI	GCTCTTC	1 cut(s)	1503
BspT107I	GGYRCC	1 cut(s)	1384
BsrDI	GCAATG	1 cut(s)	533
BsrI	ACTGG	4 cut(s)	842, 1221, 1523, 1928
BssECI	CCNNGG	5 cut(s)	153, 828, 1150, 1408, 1830
BssMI	GATC	5 cut(s)	884, 1037, 1447, 1762, 1792
BssSI	CACGAG	2 cut(s)	1611, 1755
BssT1I	CCWWGG	2 cut(s)	153, 828
Bst2BI	CACGAG	2 cut(s)	1611, 1755
Bst2UI	CCWGG	4 cut(s)	1152, 1389, 1410, 1831
Bst4CI	ACNGT	3 cut(s)	97, 272, 1710
Bst6I	CTCTTC	4 cut(s)	229, 1413, 1503, 1781
BstBAI	YACGTR	3 cut(s)	671, 1739, 1807
BstC8I	GCNNGC	2 cut(s)	1662, 1877
BstDEI	CTNAG	7 cut(s)	75, 609, 788, 953, 1017, 1104, 1202
BstDSI	CCRYGG	2 cut(s)	153, 828
BstEII	GGTNACC	1 cut(s)	1922
BstENI	CCTNNNNNAGG	1 cut(s)	1418
BstF5I	GGATG	8 cut(s)	72, 193, 394, 653, 760, 767, 940, 1225
BstFNI	CGCG	2 cut(s)	1791, 1894
BstH2I	RGCGCY	1 cut(s)	1839
BstHHI	GCGC	2 cut(s)	1838, 1894
BstKTI	GATC	5 cut(s)	887, 1040, 1450, 1765, 1795
BstMAI	GTCTC	4 cut(s)	375, 487, 1553, 1888
BstMBI	GATC	5 cut(s)	884, 1037, 1447, 1762, 1792
BstMWI	GCNNNNNNNGC	4 cut(s)	805, 908, 1010, 1835
BstNI	CCWGG	4 cut(s)	1152, 1389, 1410, 1831
BstNSI	RCATGY	1 cut(s)	1566
BstPI	GGTNACC	1 cut(s)	1922
BstSCI	CCNGG	4 cut(s)	1150, 1387, 1408, 1829
BstSFI	CTRYAG	3 cut(s)	85, 351, 1502
BstUI	CGCG	2 cut(s)	1791, 1894
BstV1I	GCAGC	5 cut(s)	154, 157, 808, 1271, 1933
BsuI	GTATCC	2 cut(s)	412, 696
BsuRI	GGCC	3 cut(s)	43, 827, 1413
BtgI	CCRYGG	2 cut(s)	153, 828
BtsCI	GGATG	8 cut(s)	72, 193, 394, 653, 760, 767, 940, 1225
BtsI	GCAGTG	5 cut(s)	82, 772, 1262, 1314, 1444
BtsIMutI	CAGTG	7 cut(s)	82, 772, 1262, 1314, 1444, 1722, 1935
BtuMI	TCGCGA	1 cut(s)	1791
BveI	ACCTGC	1 cut(s)	78
Cac8I	GCNNGC	2 cut(s)	1662, 1877
CfoI	GCGC	2 cut(s)	1838, 1894
Cfr13I	GGNCC	1 cut(s)	663
CseI	GACGC	2 cut(s)	539, 797
Csp6I	GTAC	6 cut(s)	93, 1214, 1424, 1583, 1804, 1940
CspCI	CAANNNNNGTGG	2 cut(s)	706, 741
CviQI	GTAC	6 cut(s)	93, 1214, 1424, 1583, 1804, 1940
DdeI	CTNAG	7 cut(s)	75, 609, 788, 953, 1017, 1104, 1202
DpnI	GATC	5 cut(s)	886, 1039, 1449, 1764, 1794
DpnII	GATC	5 cut(s)	884, 1037, 1447, 1762, 1792
DraIII	CACNNNGTG	1 cut(s)	1930
EaeI	YGGCCR	1 cut(s)	41
Eam1104I	CTCTTC	4 cut(s)	229, 1413, 1503, 1781
EarI	CTCTTC	4 cut(s)	229, 1413, 1503, 1781
EciI	GGCGGA	1 cut(s)	327
Eco130I	CCWWGG	2 cut(s)	153, 828
Eco47I	GGWCC	1 cut(s)	663
Eco57I	CTGAAG	1 cut(s)	210
Eco72I	CACGTG	1 cut(s)	1739
Eco88I	CYCGRG	1 cut(s)	369
Eco91I	GGTNACC	1 cut(s)	1922
EcoNI	CCTNNNNNAGG	1 cut(s)	1418
EcoO65I	GGTNACC	1 cut(s)	1922
EcoRII	CCWGG	4 cut(s)	1150, 1387, 1408, 1829
EcoT14I	CCWWGG	2 cut(s)	153, 828
ErhI	CCWWGG	2 cut(s)	153, 828
FalI	AAGNNNNNCTT	6 cut(s)	1166, 1198, 1410, 1442, 1872, 1904
FaqI	GGGAC	1 cut(s)	542
Fnu4HI	GCNGC	7 cut(s)	168, 171, 282, 797, 1260, 1811, 1947
FokI	GGATG	8 cut(s)	79, 200, 401, 660, 767, 774, 947, 1232
Fsp4HI	GCNGC	7 cut(s)	168, 171, 282, 797, 1260, 1811, 1947
FspBI	CTAG	4 cut(s)	291, 407, 573, 695
GlaI	GCGC	2 cut(s)	1837, 1893
GluI	GCNGC	7 cut(s)	168, 171, 282, 797, 1260, 1811, 1947
GsaI	CCCAGC	1 cut(s)	8
GsuI	CTGGAG	3 cut(s)	6, 825, 1449
HaeII	RGCGCY	1 cut(s)	1839
HaeIII	GGCC	3 cut(s)	43, 827, 1413
HapII	CCGG	1 cut(s)	1399
HgaI	GACGC	2 cut(s)	539, 797
HhaI	GCGC	2 cut(s)	1838, 1894
Hin6I	GCGC	2 cut(s)	1836, 1892
HinP1I	GCGC	2 cut(s)	1836, 1892
HincII	GTYRAC	1 cut(s)	275
HindII	GTYRAC	1 cut(s)	275
HindIII	AAGCTT	1 cut(s)	363
HinfI	GANTC	8 cut(s)	221, 239, 481, 613, 674, 973, 1652, 1743
HpaII	CCGG	1 cut(s)	1399
HphI	GGTGA	4 cut(s)	385, 417, 1672, 1916
Hpy166II	GTNNAC	5 cut(s)	31, 93, 100, 275, 1680
Hpy188I	TCNGA	6 cut(s)	111, 147, 682, 999, 1452, 1696
Hpy188III	TCNNGA	7 cut(s)	573, 639, 689, 1364, 1466, 1649, 1790
Hpy8I	GTNNAC	5 cut(s)	31, 93, 100, 275, 1680
HpyAV	CCTTC	6 cut(s)	440, 516, 538, 699, 1118, 1666
HpyCH4III	ACNGT	3 cut(s)	97, 272, 1710
HpyCH4IV	ACGT	4 cut(s)	670, 925, 1738, 1806
HpyF10VI	GCNNNNNNNGC	4 cut(s)	805, 908, 1010, 1835
HpyF3I	CTNAG	7 cut(s)	75, 609, 788, 953, 1017, 1104, 1202
HpySE526I	ACGT	4 cut(s)	670, 925, 1738, 1806
HspAI	GCGC	2 cut(s)	1836, 1892
Kzo9I	GATC	5 cut(s)	884, 1037, 1447, 1762, 1792
LguI	GCTCTTC	1 cut(s)	1503
LmnI	GCTCC	4 cut(s)	19, 25, 844, 916
Lsp1109I	GCAGC	5 cut(s)	154, 157, 808, 1271, 1933
LweI	GCATC	2 cut(s)	752, 1742
MaeI	CTAG	4 cut(s)	291, 407, 573, 695
MaeII	ACGT	4 cut(s)	670, 925, 1738, 1806
MaeIII	GTNAC	7 cut(s)	236, 577, 1078, 1291, 1312, 1547, 1922
MalI	GATC	5 cut(s)	886, 1039, 1449, 1764, 1794
MboI	GATC	5 cut(s)	884, 1037, 1447, 1762, 1792
MfeI	CAATTG	2 cut(s)	441, 1190
MlsI	TGGCCA	1 cut(s)	43
MluNI	TGGCCA	1 cut(s)	43
MlyI	GAGTC	5 cut(s)	215, 233, 490, 622, 982
MmeI	TCCRAC	2 cut(s)	534, 1022
Mox20I	TGGCCA	1 cut(s)	43
MroXI	GAANNNNTTC	3 cut(s)	942, 1359, 1676
MscI	TGGCCA	1 cut(s)	43
MseI	TTAA	5 cut(s)	929, 1173, 1239, 1274, 1966
Msp20I	TGGCCA	1 cut(s)	43
MspA1I	CMGCKG	2 cut(s)	1108, 1946
MspI	CCGG	1 cut(s)	1399
MspR9I	CCNGG	4 cut(s)	1152, 1389, 1410, 1831
MunI	CAATTG	2 cut(s)	441, 1190
Mva1269I	GAATGC	3 cut(s)	1398, 1475, 1856
MvaI	CCWGG	4 cut(s)	1152, 1389, 1410, 1831
MvnI	CGCG	2 cut(s)	1791, 1894
MwoI	GCNNNNNNNGC	4 cut(s)	805, 908, 1010, 1835
NcoI	CCATGG	2 cut(s)	153, 828
NdeII	GATC	5 cut(s)	884, 1037, 1447, 1762, 1792
NlaIV	GGNNCC	4 cut(s)	549, 664, 1386, 1913
NmuCI	GTSAC	3 cut(s)	236, 1312, 1922
NruI	TCGCGA	1 cut(s)	1791
NspI	RCATGY	1 cut(s)	1566
PaqCI	CACCTGC	1 cut(s)	78
PciSI	GCTCTTC	1 cut(s)	1503
PcsI	WCGNNNNNNNCGW	1 cut(s)	376
PctI	GAATGC	3 cut(s)	1398, 1475, 1856
PdmI	GAANNNNTTC	3 cut(s)	942, 1359, 1676
PfeI	GAWTC	3 cut(s)	674, 1652, 1743
PkrI	GCNGC	7 cut(s)	169, 172, 283, 798, 1261, 1812, 1948
PleI	GAGTC	5 cut(s)	215, 233, 489, 621, 981
PmaCI	CACGTG	1 cut(s)	1739
PmlI	CACGTG	1 cut(s)	1739
PpsI	GAGTC	5 cut(s)	215, 233, 489, 621, 981
Ppu21I	YACGTR	3 cut(s)	671, 1739, 1807
Psp1406I	AACGTT	1 cut(s)	925
Psp6I	CCWGG	4 cut(s)	1150, 1387, 1408, 1829
PspCI	CACGTG	1 cut(s)	1739
PspEI	GGTNACC	1 cut(s)	1922
PspFI	CCCAGC	1 cut(s)	4
PspGI	CCWGG	4 cut(s)	1150, 1387, 1408, 1829
PspN4I	GGNNCC	4 cut(s)	549, 664, 1386, 1913
PspPI	GGNCC	1 cut(s)	663
PstI	CTGCAG	1 cut(s)	89
PvuII	CAGCTG	2 cut(s)	1108, 1946
RruI	TCGCGA	1 cut(s)	1791
RsaI	GTAC	6 cut(s)	94, 1215, 1425, 1584, 1805, 1941
RsaNI	GTAC	6 cut(s)	93, 1214, 1424, 1583, 1804, 1940
SapI	GCTCTTC	1 cut(s)	1503
SaqAI	TTAA	5 cut(s)	929, 1173, 1239, 1274, 1966
SatI	GCNGC	7 cut(s)	168, 171, 282, 797, 1260, 1811, 1947
Sau3AI	GATC	5 cut(s)	884, 1037, 1447, 1762, 1792
Sau96I	GGNCC	1 cut(s)	663
SchI	GAGTC	5 cut(s)	215, 233, 490, 622, 982
ScrFI	CCNGG	4 cut(s)	1152, 1389, 1410, 1831
SfaNI	GCATC	2 cut(s)	752, 1742
SfcI	CTRYAG	3 cut(s)	85, 351, 1502
SinI	GGWCC	1 cut(s)	663
SmlI	CTYRAG	1 cut(s)	1647
SmoI	CTYRAG	1 cut(s)	1647
SsiI	CCGC	6 cut(s)	281, 312, 1004, 1086, 1284, 1810
SspMI	CTAG	4 cut(s)	291, 407, 573, 695
StyD4I	CCNGG	4 cut(s)	1150, 1387, 1408, 1829
StyI	CCWWGG	2 cut(s)	153, 828
TaaI	ACNGT	3 cut(s)	97, 272, 1710
TaiI	ACGT	4 cut(s)	673, 928, 1741, 1809
TaqI	TCGA	6 cut(s)	739, 979, 1093, 1156, 1746, 1779
TatI	WGTACW	3 cut(s)	92, 1213, 1582
TauI	GCSGC	2 cut(s)	284, 1813
TfiI	GAWTC	3 cut(s)	674, 1652, 1743
Tru1I	TTAA	5 cut(s)	929, 1173, 1239, 1274, 1966
Tru9I	TTAA	5 cut(s)	929, 1173, 1239, 1274, 1966
TscAI	CASTG	7 cut(s)	89, 772, 1269, 1321, 1444, 1729, 1935
TseFI	GTSAC	3 cut(s)	236, 1312, 1922
TseI	GCWGC	5 cut(s)	167, 170, 796, 1259, 1946
Tsp45I	GTSAC	3 cut(s)	236, 1312, 1922
TspDTI	ATGAA	7 cut(s)	184, 405, 417, 951, 1622, 1685, 1849
TspGWI	ACGGA	1 cut(s)	224
TspRI	CASTG	7 cut(s)	89, 772, 1269, 1321, 1444, 1729, 1935
VpaK11BI	GGWCC	1 cut(s)	663
XagI	CCTNNNNNAGG	1 cut(s)	1418
XapI	RAATTY	2 cut(s)	568, 1049
XbaI	TCTAGA	1 cut(s)	572
XceI	RCATGY	1 cut(s)	1566
XmnI	GAANNNNTTC	3 cut(s)	942, 1359, 1676
XspI	CTAG	4 cut(s)	291, 407, 573, 695

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.