Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0004792

Physical Location & Seq

Genomic Coordinates Forward (+)

50424931 .. 50430442

Gene Structure 5512 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG282200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGCTGGGCAAAGCTCCTGCTCCAGCAGTAAACCACCTATGGCCAAAACGCATTGACCCAGAATGGATGGTGGCTCAGCACCACTGCAGGTGTACTGTCCACCCCCATCAGATTAGAAAATGGGGAATAAGTTGCAGTTTGGGTCAGAAAGCCATGGATAACTCTGCTGCTGCTTATGACCTCATGGATGATTTCATTGTATTGGGTGCAACCAAGAATGACTCTTCAGTAGTCCGTGACTCTCCCAAAACCAATACCAGAGATAATGACCGTCAACAGGCGGCAACTACTAGGAGAGTTGCCAAAGTTGGCGGAGGTTTTGGGAGATTGAAAGTGCAAAGAGTGAAATCTGTAGTGGATAAAGCTTCTCGGGTGAAGCGAGACATGGATGAAAGTGAAAATGAACTAGATGTGCAGGATACATCACCATTTATCTCTACAATTGAAGGTATGGGGAAGAAGAAGAAAGCAAATGCCATGAGTCGTGGAGGGAGACTTTCAAATCCTTCCAACTCACATGAGTTTAGGGACGCATTGCGTAAGAAGGAACCAACAGATTACAAGGAAAATTCTAGAGTAACTACCAAAGATTTTTTTGAGCCACTCCCTGAGAGTCGGCATAAACCATATATGCGTCAGAAGCCTAACACCATCGTAGATCGACGAAAGGCTTCAGTTTCAAGAAAAGGATGGGGTAGTGGAGGGTCCATACGTGAATCATCAGAGTATCCAGACCTAGACCAACGAAGGAGAGTGTCCAATGATGGTGGCTTTTTCAGTCGAAAATCCTTTAGGGATGTGGGATGCAGTGAGTATATGATTGAATGTCTAAGGAAGCAGCTTTTCCAGCGTCCATCACATATTCAGGCCATGGCGTTTGCTCCAGTTGTTGCTGGAAAAACCTCTATTATAGCTGACCAAAGTGGATCAGGCAAAACATTGGCTTATCTTGCTCCTGTCATTCAACGTTTAAGGGATGAAGAACTTCAAGGACTGAGCAAGTCCTCATCAAAGAGTCCTCGATTAGTTGTATTAGTTCCGACTGCGGAATTGGCTTCTCAGGTTTTGGGTAATTGCCGATCAATATCAAAATTTGGAGTTCCTGTCAGGTCTATGGTTGTAACAGGCGGTCATCGACAGAAAACTCAGCTGGAAAGTTTGCAAGAAGGTGTTGATGTTCTAATTGCAACCCCAGGTCGATTTATATATCTAATTAAGGAGGGCTTCTTGCAATTGTCAAATCTAAGATGTGCTGTACTGGATGAGGTAGATATACTCTTTAATGATGAGGATTTTGAAGCAGCACTGCAAAGTTTAATCAATTCCGCACCTGTAACCACACAATATCTTTTTGTCACTGCAACTTTACCACTTGGCATTTACAACAAGTTAGTTGAAGATTTTCCTGATTGTCAAGTGGTCATGGCACCTGGAATGCACCGGATAAGCCCTGGCCTTGAAGAGGTACTTGTAGATTGCAGTGGAGATGATCGGAGTGAAAAATCTCCAGAGATGGCATTCACAAATAAGAAATCTGCTCTTCTACAGCTTGTGGAGGGAAGTCCAGTTCCCAAAACAATAGTCTTTTGTAACAAGGTAAGGTGGGAGGATTTACTTTTGTGGTTTACACCGGTTGCCCCTGTGTGCTATTTACAAGCATTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006968 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0009753 GO:0009814 GO:0009817 GO:0009987 GO:0010033 GO:0010501 GO:0014070 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0032870 GO:0034641 GO:0035690 GO:0042221 GO:0042493 GO:0042623 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046483 GO:0046677 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0070013 GO:0070035 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071369 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0090304 GO:0098542 GO:0140098 GO:1901360 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

554

Amino Acids

61.77

Weight (kDa)

9.18

Isoelectric Point (pI)

57.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	287 - 457	4.8e-33	DEAD/DEAH box helicase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004792)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06980
fragaria_vesca	FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860
malus_domestica	MD16G1131600.v1.1
prunus_persica	Prupe.1G209200_v2.0.a1
pyrus_communis	pycom16g11600
rosa_chinensis	RchiOBHm_Chr4g0410871 RchiOBHm_Chr4g0428121
rosa_laevigata	RLG00000007180 RLG00000008393
rosa_multiflora	Rmu_sc0004940.1_g000014 Rmu_sc0007108.1_g000006 Rmu_sc0009599.1_g000014
rosa_roxburghii	Rroxscaffold_5G00369830
rosa_rugosa	Rorug04G0222400
rosa_samantha	Rh4AG163400 Rh4AG279700 Rh4BG285100 Rh4CG176300 Rh4CG300700 Rh4DG159100 Rh4DG282200
rosa_wichuraiana	Rw0G005430 Rw4G024300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	78
Acc36I	ACCTGC	1 cut(s)	78
AccB1I	GGYRCC	1 cut(s)	1426
AciI	CCGC	5 cut(s)	281, 312, 1046, 1128, 1326
AclI	AACGTT	1 cut(s)	967
AclWI	GGATC	1 cut(s)	934
AcoI	YGGCCR	1 cut(s)	41
AcsI	RAATTY	2 cut(s)	568, 1091
AcuI	CTGAAG	2 cut(s)	210, 657
AfaI	GTAC	3 cut(s)	94, 1257, 1467
AfiI	CCNNNNNNNGG	2 cut(s)	277, 1462
AgeI	ACCGGT	1 cut(s)	1630
AjnI	CCWGG	3 cut(s)	1192, 1429, 1450
AloI	GAACNNNNNNTCC	2 cut(s)	1551, 1583
AluBI	AGCT	6 cut(s)	14, 365, 841, 914, 1150, 1549
AluI	AGCT	6 cut(s)	14, 365, 841, 914, 1150, 1549
Alw26I	GTCTC	2 cut(s)	375, 487
AlwI	GGATC	1 cut(s)	934
Ama87I	CYCGRG	1 cut(s)	369
AoxI	GGCC	3 cut(s)	41, 867, 1453
ApeKI	GCWGC	4 cut(s)	167, 170, 838, 1301
ApoI	RAATTY	2 cut(s)	568, 1091
ArsI	GACNNNNNNTTYG	2 cut(s)	1566, 1598
AsiGI	ACCGGT	1 cut(s)	1630
Asp700I	GAANNNNTTC	3 cut(s)	670, 984, 1401
AspS9I	GGNCC	1 cut(s)	705
AsuHPI	GGTGA	2 cut(s)	385, 417
AvaI	CYCGRG	1 cut(s)	369
AvaII	GGWCC	1 cut(s)	705
BalI	TGGCCA	1 cut(s)	43
BanI	GGYRCC	1 cut(s)	1426
BbvI	GCAGC	4 cut(s)	154, 157, 850, 1313
BccI	CCATC	7 cut(s)	61, 114, 659, 684, 758, 862, 1507
BciT130I	CCWGG	3 cut(s)	1194, 1431, 1452
BciVI	GTATCC	2 cut(s)	412, 738
BcoDI	GTCTC	2 cut(s)	375, 487
BfaI	CTAG	4 cut(s)	291, 407, 573, 737
BfmI	CTRYAG	3 cut(s)	85, 351, 1544
BfuAI	ACCTGC	1 cut(s)	78
BfuI	GTATCC	2 cut(s)	412, 738
BisI	GCNGC	5 cut(s)	168, 171, 282, 839, 1302
BlpI	GCTNAGC	1 cut(s)	75
BlsI	GCNGC	5 cut(s)	169, 172, 283, 840, 1303
Bme1390I	CCNGG	3 cut(s)	1194, 1431, 1452
Bme18I	GGWCC	1 cut(s)	705
BmeT110I	CYCGRG	1 cut(s)	369
BmgT120I	GGNCC	1 cut(s)	705
BmiI	GGNNCC	3 cut(s)	549, 706, 1428
BmrFI	CCNGG	3 cut(s)	1194, 1431, 1452
BmsI	GCATC	1 cut(s)	794
BpmI	CTGGAG	3 cut(s)	6, 867, 1491
Bpu1102I	GCTNAGC	1 cut(s)	75
BsaAI	YACGTR	1 cut(s)	713
BsaBI	GATNNNNATC	1 cut(s)	1084
BsaJI	CCNNGG	4 cut(s)	153, 870, 1192, 1450
BsaWI	WCCGGW	2 cut(s)	1440, 1630
BsaXI	ACNNNNNCTCC	2 cut(s)	1089, 1119
Bsc4I	CCNNNNNNNGG	2 cut(s)	277, 1462
Bse118I	RCCGGY	1 cut(s)	1630
Bse1I	ACTGG	3 cut(s)	884, 1263, 1565
Bse3DI	GCAATG	1 cut(s)	533
Bse8I	GATNNNNATC	1 cut(s)	1084
BseBI	CCWGG	3 cut(s)	1194, 1431, 1452
BseDI	CCNNGG	4 cut(s)	153, 870, 1192, 1450
BseGI	GGATG	8 cut(s)	72, 193, 394, 695, 802, 809, 982, 1267
BseJI	GATNNNNATC	1 cut(s)	1084
BseLI	CCNNNNNNNGG	2 cut(s)	277, 1462
BseMI	GCAATG	1 cut(s)	533
BseMII	CTCAG	5 cut(s)	89, 600, 986, 1073, 1160
BseNI	ACTGG	3 cut(s)	884, 1263, 1565
BseXI	GCAGC	4 cut(s)	154, 157, 850, 1313
BseYI	CCCAGC	1 cut(s)	4
BsgI	GTGCAG	1 cut(s)	434
BshFI	GGCC	3 cut(s)	43, 869, 1455
BshNI	GGYRCC	1 cut(s)	1426
BshTI	ACCGGT	1 cut(s)	1630
BsiHKCI	CYCGRG	1 cut(s)	369
BsiSI	CCGG	2 cut(s)	1441, 1631
BslFI	GGGAC	1 cut(s)	542
BslI	CCNNNNNNNGG	2 cut(s)	277, 1462
BsmAI	GTCTC	2 cut(s)	375, 487
BsmFI	GGGAC	1 cut(s)	542
BsmI	GAATGC	3 cut(s)	1440, 1517, 1658
BsnI	GGCC	3 cut(s)	43, 869, 1455
BsoBI	CYCGRG	1 cut(s)	369
Bsp143I	GATC	4 cut(s)	658, 926, 1079, 1489
Bsp1720I	GCTNAGC	1 cut(s)	75
Bsp19I	CCATGG	2 cut(s)	153, 870
BspACI	CCGC	5 cut(s)	281, 312, 1046, 1128, 1326
BspANI	GGCC	3 cut(s)	43, 869, 1455
BspCNI	CTCAG	5 cut(s)	88, 601, 987, 1072, 1159
BspLI	GGNNCC	3 cut(s)	549, 706, 1428
BspMAI	CTGCAG	1 cut(s)	89
BspMI	ACCTGC	1 cut(s)	78
BspPI	GGATC	1 cut(s)	934
BspQI	GCTCTTC	1 cut(s)	1545
BspT107I	GGYRCC	1 cut(s)	1426
BsrDI	GCAATG	1 cut(s)	533
BsrFI	RCCGGY	1 cut(s)	1630
BsrI	ACTGG	3 cut(s)	884, 1263, 1565
BssAI	RCCGGY	1 cut(s)	1630
BssECI	CCNNGG	4 cut(s)	153, 870, 1192, 1450
BssMI	GATC	4 cut(s)	658, 926, 1079, 1489
BssT1I	CCWWGG	2 cut(s)	153, 870
Bst2UI	CCWGG	3 cut(s)	1194, 1431, 1452
Bst4CI	ACNGT	2 cut(s)	97, 272
Bst6I	CTCTTC	3 cut(s)	229, 1455, 1545
BstBAI	YACGTR	1 cut(s)	713
BstDEI	CTNAG	7 cut(s)	75, 609, 830, 995, 1059, 1146, 1244
BstDSI	CCRYGG	2 cut(s)	153, 870
BstENI	CCTNNNNNAGG	1 cut(s)	1460
BstF5I	GGATG	8 cut(s)	72, 193, 394, 695, 802, 809, 982, 1267
BstKTI	GATC	4 cut(s)	661, 929, 1082, 1492
BstMAI	GTCTC	2 cut(s)	375, 487
BstMBI	GATC	4 cut(s)	658, 926, 1079, 1489
BstMWI	GCNNNNNNNGC	4 cut(s)	640, 847, 950, 1052
BstNI	CCWGG	3 cut(s)	1194, 1431, 1452
BstSCI	CCNGG	3 cut(s)	1192, 1429, 1450
BstSFI	CTRYAG	3 cut(s)	85, 351, 1544
BstV1I	GCAGC	4 cut(s)	154, 157, 850, 1313
BsuI	GTATCC	2 cut(s)	412, 738
BsuRI	GGCC	3 cut(s)	43, 869, 1455
BtgI	CCRYGG	2 cut(s)	153, 870
BtsCI	GGATG	8 cut(s)	72, 193, 394, 695, 802, 809, 982, 1267
BtsI	GCAGTG	5 cut(s)	82, 814, 1304, 1356, 1486
BtsIMutI	CAGTG	5 cut(s)	82, 814, 1304, 1356, 1486
BveI	ACCTGC	1 cut(s)	78
Cfr10I	RCCGGY	1 cut(s)	1630
Cfr13I	GGNCC	1 cut(s)	705
CseI	GACGC	3 cut(s)	539, 623, 839
Csp6I	GTAC	3 cut(s)	93, 1256, 1466
CspAI	ACCGGT	1 cut(s)	1630
CspCI	CAANNNNNGTGG	2 cut(s)	748, 783
CviAII	CATG	7 cut(s)	154, 184, 385, 478, 518, 871, 1423
CviQI	GTAC	3 cut(s)	93, 1256, 1466
DdeI	CTNAG	7 cut(s)	75, 609, 830, 995, 1059, 1146, 1244
DpnI	GATC	4 cut(s)	660, 928, 1081, 1491
DpnII	GATC	4 cut(s)	658, 926, 1079, 1489
EaeI	YGGCCR	1 cut(s)	41
Eam1104I	CTCTTC	3 cut(s)	229, 1455, 1545
EarI	CTCTTC	3 cut(s)	229, 1455, 1545
EciI	GGCGGA	1 cut(s)	327
Eco130I	CCWWGG	2 cut(s)	153, 870
Eco47I	GGWCC	1 cut(s)	705
Eco57I	CTGAAG	2 cut(s)	210, 657
Eco88I	CYCGRG	1 cut(s)	369
EcoNI	CCTNNNNNAGG	1 cut(s)	1460
EcoRII	CCWGG	3 cut(s)	1192, 1429, 1450
EcoT14I	CCWWGG	2 cut(s)	153, 870
ErhI	CCWWGG	2 cut(s)	153, 870
FaeI	CATG	7 cut(s)	157, 187, 388, 481, 521, 874, 1426
FalI	AAGNNNNNCTT	4 cut(s)	1208, 1240, 1452, 1484
FaqI	GGGAC	1 cut(s)	542
FatI	CATG	7 cut(s)	153, 183, 384, 477, 517, 870, 1422
Fnu4HI	GCNGC	5 cut(s)	168, 171, 282, 839, 1302
FokI	GGATG	8 cut(s)	79, 200, 401, 702, 809, 816, 989, 1274
Fsp4HI	GCNGC	5 cut(s)	168, 171, 282, 839, 1302
FspBI	CTAG	4 cut(s)	291, 407, 573, 737
GluI	GCNGC	5 cut(s)	168, 171, 282, 839, 1302
GsaI	CCCAGC	1 cut(s)	8
GsuI	CTGGAG	3 cut(s)	6, 867, 1491
HaeIII	GGCC	3 cut(s)	43, 869, 1455
HapII	CCGG	2 cut(s)	1441, 1631
HgaI	GACGC	3 cut(s)	539, 623, 839
Hin1II	CATG	7 cut(s)	157, 187, 388, 481, 521, 874, 1426
HincII	GTYRAC	1 cut(s)	275
HindII	GTYRAC	1 cut(s)	275
HindIII	AAGCTT	1 cut(s)	363
HinfI	GANTC	6 cut(s)	221, 239, 481, 613, 716, 1015
HpaII	CCGG	2 cut(s)	1441, 1631
HphI	GGTGA	2 cut(s)	385, 417
Hpy166II	GTNNAC	5 cut(s)	31, 93, 100, 275, 1626
Hpy188I	TCNGA	7 cut(s)	111, 147, 639, 724, 1041, 1494, 1664
Hpy188III	TCNNGA	5 cut(s)	573, 681, 731, 1406, 1508
Hpy8I	GTNNAC	5 cut(s)	31, 93, 100, 275, 1626
Hpy99I	CGWCG	1 cut(s)	666
HpyAV	CCTTC	5 cut(s)	440, 516, 538, 741, 1160
HpyCH4III	ACNGT	2 cut(s)	97, 272
HpyCH4IV	ACGT	2 cut(s)	712, 967
HpyF10VI	GCNNNNNNNGC	4 cut(s)	640, 847, 950, 1052
HpyF3I	CTNAG	7 cut(s)	75, 609, 830, 995, 1059, 1146, 1244
HpySE526I	ACGT	2 cut(s)	712, 967
Hsp92II	CATG	7 cut(s)	157, 187, 388, 481, 521, 874, 1426
Kzo9I	GATC	4 cut(s)	658, 926, 1079, 1489
LguI	GCTCTTC	1 cut(s)	1545
LmnI	GCTCC	4 cut(s)	19, 25, 886, 958
Lsp1109I	GCAGC	4 cut(s)	154, 157, 850, 1313
LweI	GCATC	1 cut(s)	794
MaeI	CTAG	4 cut(s)	291, 407, 573, 737
MaeII	ACGT	2 cut(s)	712, 967
MaeIII	GTNAC	6 cut(s)	236, 577, 1120, 1333, 1354, 1589
MalI	GATC	4 cut(s)	660, 928, 1081, 1491
MboI	GATC	4 cut(s)	658, 926, 1079, 1489
MboII	GAAGA	8 cut(s)	216, 469, 472, 475, 992, 1409, 1472, 1532
MfeI	CAATTG	2 cut(s)	441, 1232
MlsI	TGGCCA	1 cut(s)	43
MluCI	AATT	9 cut(s)	441, 568, 1049, 1072, 1091, 1182, 1212, 1232, 1321
MluNI	TGGCCA	1 cut(s)	43
MlyI	GAGTC	5 cut(s)	215, 233, 490, 622, 1024
MmeI	TCCRAC	2 cut(s)	534, 1064
Mox20I	TGGCCA	1 cut(s)	43
MroXI	GAANNNNTTC	3 cut(s)	670, 984, 1401
MscI	TGGCCA	1 cut(s)	43
MseI	TTAA	4 cut(s)	971, 1215, 1281, 1316
Msp20I	TGGCCA	1 cut(s)	43
MspA1I	CMGCKG	1 cut(s)	1150
MspI	CCGG	2 cut(s)	1441, 1631
MspR9I	CCNGG	3 cut(s)	1194, 1431, 1452
MunI	CAATTG	2 cut(s)	441, 1232
Mva1269I	GAATGC	3 cut(s)	1440, 1517, 1658
MvaI	CCWGG	3 cut(s)	1194, 1431, 1452
MwoI	GCNNNNNNNGC	4 cut(s)	640, 847, 950, 1052
NcoI	CCATGG	2 cut(s)	153, 870
NdeII	GATC	4 cut(s)	658, 926, 1079, 1489
NlaIII	CATG	7 cut(s)	157, 187, 388, 481, 521, 874, 1426
NlaIV	GGNNCC	3 cut(s)	549, 706, 1428
NmuCI	GTSAC	2 cut(s)	236, 1354
PaqCI	CACCTGC	1 cut(s)	78
PciSI	GCTCTTC	1 cut(s)	1545
PcsI	WCGNNNNNNNCGW	1 cut(s)	376
PctI	GAATGC	3 cut(s)	1440, 1517, 1658
PdmI	GAANNNNTTC	3 cut(s)	670, 984, 1401
PfeI	GAWTC	1 cut(s)	716
PinAI	ACCGGT	1 cut(s)	1630
PkrI	GCNGC	5 cut(s)	169, 172, 283, 840, 1303
PleI	GAGTC	5 cut(s)	215, 233, 489, 621, 1023
PpsI	GAGTC	5 cut(s)	215, 233, 489, 621, 1023
Ppu21I	YACGTR	1 cut(s)	713
Psp1406I	AACGTT	1 cut(s)	967
Psp6I	CCWGG	3 cut(s)	1192, 1429, 1450
PspFI	CCCAGC	1 cut(s)	4
PspGI	CCWGG	3 cut(s)	1192, 1429, 1450
PspN4I	GGNNCC	3 cut(s)	549, 706, 1428
PspPI	GGNCC	1 cut(s)	705
PstI	CTGCAG	1 cut(s)	89
PvuII	CAGCTG	1 cut(s)	1150
RsaI	GTAC	3 cut(s)	94, 1257, 1467
RsaNI	GTAC	3 cut(s)	93, 1256, 1466
SapI	GCTCTTC	1 cut(s)	1545
SaqAI	TTAA	4 cut(s)	971, 1215, 1281, 1316
SatI	GCNGC	5 cut(s)	168, 171, 282, 839, 1302
Sau3AI	GATC	4 cut(s)	658, 926, 1079, 1489
Sau96I	GGNCC	1 cut(s)	705
SchI	GAGTC	5 cut(s)	215, 233, 490, 622, 1024
ScrFI	CCNGG	3 cut(s)	1194, 1431, 1452
SfaNI	GCATC	1 cut(s)	794
SfcI	CTRYAG	3 cut(s)	85, 351, 1544
SinI	GGWCC	1 cut(s)	705
Sse9I	AATT	9 cut(s)	441, 568, 1049, 1072, 1091, 1182, 1212, 1232, 1321
SsiI	CCGC	5 cut(s)	281, 312, 1046, 1128, 1326
SspMI	CTAG	4 cut(s)	291, 407, 573, 737
StyD4I	CCNGG	3 cut(s)	1192, 1429, 1450
StyI	CCWWGG	2 cut(s)	153, 870
TaaI	ACNGT	2 cut(s)	97, 272
TaiI	ACGT	2 cut(s)	715, 970
TaqI	TCGA	5 cut(s)	661, 781, 1021, 1135, 1198
TasI	AATT	9 cut(s)	441, 568, 1049, 1072, 1091, 1182, 1212, 1232, 1321
TatI	WGTACW	2 cut(s)	92, 1255
TauI	GCSGC	1 cut(s)	284
TfiI	GAWTC	1 cut(s)	716
Tru1I	TTAA	4 cut(s)	971, 1215, 1281, 1316
Tru9I	TTAA	4 cut(s)	971, 1215, 1281, 1316
TscAI	CASTG	5 cut(s)	89, 814, 1311, 1363, 1486
TseFI	GTSAC	2 cut(s)	236, 1354
TseI	GCWGC	4 cut(s)	167, 170, 838, 1301
Tsp45I	GTSAC	2 cut(s)	236, 1354
TspDTI	ATGAA	4 cut(s)	184, 405, 417, 993
TspGWI	ACGGA	1 cut(s)	224
TspRI	CASTG	5 cut(s)	89, 814, 1311, 1363, 1486
VpaK11BI	GGWCC	1 cut(s)	705
XagI	CCTNNNNNAGG	1 cut(s)	1460
XapI	RAATTY	2 cut(s)	568, 1091
XbaI	TCTAGA	1 cut(s)	572
XmnI	GAANNNNTTC	3 cut(s)	670, 984, 1401
XspI	CTAG	4 cut(s)	291, 407, 573, 737

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.