Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00213

Orthogroup ID

OG0004792

Physical Location & Seq

Genomic Coordinates Forward (+)

27788 .. 32379

Gene Structure 4592 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G005430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1593 bp

ATGCTGGGCAAAGCTCCTGCTCCAGTAGTGAAACACCTATGGCCAAAAAGCATTGACCCAGAATGGATGGTGGCACAGCATCACTGCAGCTCAACCAAGAATGACTCTTCTGTAGTCCGTGACTCTCCCAAAACCAATACCAGAGATAATGACCATCAACAAGCGGCACCTACTAGGAGAGTTGCCGGAAGTTTTGGGAGATTGAAACGAGACATGGATGAAAGTGAAAATGAACTAGATGTGCAGGACACATCACCATTTATCTCTACAATTGAAGGTATGGGGAAGAAGAAGAAAGCAAATGCCATGAGTCGTGGAGGGAGAGTTTCGAATCCTTCCAACTCACATGAGTTTAGGGACGCATTGCGTAAGAAGGAACCAACAGATTACAAGGACAATTCTAGAGTAACTACGAAAGATTTTTTTGAGCCACTCCCTGAGAGTCGGCATAAACCATATATGCGTCAGAAGCCTAACACCATCGTAGACAGACAAAAGGTTTCAGTTTCAAGAAAAGGATGGGGTAGTGGAGGGTCCGTAAGCGATTCATCGGAGTATCCAGACCTAGACCAACGAAGGAGAGTGTCCAATGATGGTGGCTTTTTCAGTCGAAAATCCTTTAGGGATGCGGGATGCAGTGAGTATCTGATTGAATGTCTAAGGAAGCAGCTTTTCCAGCGTCCATCACATATTCAGGCCATGGCGTTTGCTCCAGTTGTTGCTGGAAAAACCTCTATTATAGCTGACCAAAGTGGATCTGGCAAAACATTGGCTTATCTTGCTCCTGTCATTCAGCGTTTAAGGGATGAAGAACTTCAAGGACTGAGCAAGTCCTCATCACAGACTTCTCAGGTTTTGGGTAATTGCCGATCAATATCAAAATTTGGAGTTCCTGTCAGGTCTATGGTTGTAACAGGCGGTCATCAACAGAAAACTCAGCTGGAAAGTTTGCAGGAAGGTGTTGATGTTCTAATTGCAACCCCAGGTCGATTTATATATCTAATTAAGGAGGGCTTCTTGCAATTGTCAAATTTAAGATGTGCTGTGCTGGATGAGGTAGATATAGTCTTTAATGATGAGGATTTTGAAGCAGCACTGCAAAGTTTAATCAATTCCGCACCTGTAACCACACAATATCTTTTTGTCACTGCAACTTTACCACTTGGCATTTACAACAAGTTAGTTGAAGATTTTCCTGATTGTCAAGAGGGCATGGCACCTGGAATGCACCGGATAAGCCCTGGCCTTGAAGAGGTTCTTGTAGATTGCCGTGGAAATGATCGGAGTGAAAAATCTCCAGAGATGACATTCACAAATAAGAAATCTGCTCTTCTACAGCTTCCCTCCATAAAAGTTGAGAATGTACTATCACGCTTTTACAGAAGTGGAACTCGTGTTCAAACTCTACCATTTCATTCTGCTCTGGCTCAAGAATCACGGCTTGCAAACATGAAGGAGTTCACCAATTCTCGTTCAGAGAAAGTAGCACAGTTTTTGGTCTGCACTGATAGAGCATCACGTGGAATCGATTTTCCTGGTGGGGATCATGTTATACTCTTCGACTTCCCTCGCGATCCAAGTGAGTACGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006968 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0009753 GO:0009814 GO:0009817 GO:0009987 GO:0010033 GO:0010501 GO:0014070 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0032870 GO:0034641 GO:0035690 GO:0042221 GO:0042493 GO:0042623 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046483 GO:0046677 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0070013 GO:0070035 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071369 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0090304 GO:0098542 GO:0140098 GO:1901360 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

530

Amino Acids

59.15

Weight (kDa)

8.73

Isoelectric Point (pI)

57.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	230 - 387	4.2e-25	DEAD/DEAH box helicase
Helicase_C	PF00271	436 - 530	7.7e-13	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004792)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06980
fragaria_vesca	FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860 FvH4_4g21860
malus_domestica	MD16G1131600.v1.1
prunus_persica	Prupe.1G209200_v2.0.a1
pyrus_communis	pycom16g11600
rosa_chinensis	RchiOBHm_Chr4g0410871 RchiOBHm_Chr4g0428121
rosa_laevigata	RLG00000007180 RLG00000008393
rosa_multiflora	Rmu_sc0004940.1_g000014 Rmu_sc0007108.1_g000006 Rmu_sc0009599.1_g000014
rosa_roxburghii	Rroxscaffold_5G00369830
rosa_rugosa	Rorug04G0222400
rosa_samantha	Rh4AG163400 Rh4AG279700 Rh4BG285100 Rh4CG176300 Rh4CG300700 Rh4DG159100 Rh4DG282200
rosa_wichuraiana	Rw0G005430 Rw4G024300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	166, 1216
AccI	GTMKAC	1 cut(s)	486
AccII	CGCG	1 cut(s)	1572
AciI	CCGC	4 cut(s)	164, 629, 918, 1116
AclWI	GGATC	3 cut(s)	763, 1551, 1568
AcoI	YGGCCR	1 cut(s)	41
AcsI	RAATTY	2 cut(s)	881, 1030
AcvI	CACGTG	1 cut(s)	1520
AfaI	GTAC	2 cut(s)	1365, 1586
AfiI	CCNNNNNNNGG	1 cut(s)	1252
AflIII	ACRYGT	1 cut(s)	1587
AgsI	TTSAA	9 cut(s)	205, 275, 510, 653, 818, 1088, 1187, 1250, 1400
AjnI	CCWGG	4 cut(s)	982, 1219, 1240, 1534
AloI	GAACNNNNNNTCC	2 cut(s)	1380, 1412
AluBI	AGCT	6 cut(s)	14, 90, 670, 743, 940, 1339
AluI	AGCT	6 cut(s)	14, 90, 670, 743, 940, 1339
Alw26I	GTCTC	1 cut(s)	204
AlwI	GGATC	3 cut(s)	763, 1551, 1568
AoxI	GGCC	3 cut(s)	41, 696, 1243
ApeKI	GCWGC	3 cut(s)	87, 667, 1091
ApoI	RAATTY	2 cut(s)	881, 1030
Asp700I	GAANNNNTTC	4 cut(s)	813, 1191, 1254, 1457
AspS9I	GGNCC	1 cut(s)	534
AsuHPI	GGTGA	2 cut(s)	246, 1453
AsuII	TTCGAA	1 cut(s)	329
AvaII	GGWCC	1 cut(s)	534
BalI	TGGCCA	1 cut(s)	43
BanI	GGYRCC	2 cut(s)	166, 1216
BauI	CACGAG	1 cut(s)	1392
BbrPI	CACGTG	1 cut(s)	1520
BbvI	GCAGC	3 cut(s)	99, 679, 1103
BccI	CCATC	6 cut(s)	61, 162, 488, 513, 587, 691
BceAI	ACGGC	2 cut(s)	1254, 1454
BciT130I	CCWGG	4 cut(s)	984, 1221, 1242, 1536
BciVI	GTATCC	1 cut(s)	567
BcoDI	GTCTC	1 cut(s)	204
BfaI	CTAG	4 cut(s)	174, 236, 402, 566
BfmI	CTRYAG	3 cut(s)	85, 111, 1334
BfuI	GTATCC	1 cut(s)	567
BisI	GCNGC	4 cut(s)	88, 165, 668, 1092
BlsI	GCNGC	4 cut(s)	89, 166, 669, 1093
Bme1390I	CCNGG	4 cut(s)	984, 1221, 1242, 1536
Bme18I	GGWCC	1 cut(s)	534
BmgT120I	GGNCC	1 cut(s)	534
BmiI	GGNNCC	4 cut(s)	168, 378, 535, 1218
BmrFI	CCNGG	4 cut(s)	984, 1221, 1242, 1536
BmsI	GCATC	4 cut(s)	88, 616, 623, 1523
BpmI	CTGGAG	3 cut(s)	6, 696, 1281
Bpu14I	TTCGAA	1 cut(s)	329
BpuEI	CTTGAG	1 cut(s)	1413
Bsa29I	ATCGAT	1 cut(s)	1527
BsaAI	YACGTR	2 cut(s)	1520, 1588
BsaBI	GATNNNNATC	1 cut(s)	874
BsaJI	CCNNGG	4 cut(s)	699, 982, 1240, 1270
BsaWI	WCCGGW	1 cut(s)	1230
BsaXI	ACNNNNNCTCC	6 cut(s)	309, 339, 522, 552, 879, 909
Bsc4I	CCNNNNNNNGG	1 cut(s)	1252
Bse1I	ACTGG	2 cut(s)	23, 713
Bse3DI	GCAATG	1 cut(s)	362
Bse8I	GATNNNNATC	1 cut(s)	874
BseBI	CCWGG	4 cut(s)	984, 1221, 1242, 1536
BseCI	ATCGAT	1 cut(s)	1527
BseDI	CCNNGG	4 cut(s)	699, 982, 1240, 1270
BseGI	GGATG	7 cut(s)	72, 223, 524, 631, 638, 811, 1057
BseJI	GATNNNNATC	1 cut(s)	874
BseLI	CCNNNNNNNGG	1 cut(s)	1252
BseMI	GCAATG	1 cut(s)	362
BseMII	CTCAG	4 cut(s)	429, 815, 863, 950
BseNI	ACTGG	2 cut(s)	23, 713
BseXI	GCAGC	3 cut(s)	99, 679, 1103
BseYI	CCCAGC	1 cut(s)	4
BsgI	GTGCAG	2 cut(s)	263, 1486
Bsh1236I	CGCG	1 cut(s)	1572
BshFI	GGCC	3 cut(s)	43, 698, 1245
BshNI	GGYRCC	2 cut(s)	166, 1216
BshVI	ATCGAT	1 cut(s)	1527
BsiSI	CCGG	2 cut(s)	186, 1231
BslFI	GGGAC	1 cut(s)	371
BslI	CCNNNNNNNGG	1 cut(s)	1252
BsmAI	GTCTC	1 cut(s)	204
BsmFI	GGGAC	1 cut(s)	371
BsmI	GAATGC	1 cut(s)	1230
BsnI	GGCC	3 cut(s)	43, 698, 1245
Bsp119I	TTCGAA	1 cut(s)	329
Bsp143I	GATC	5 cut(s)	755, 869, 1279, 1543, 1573
Bsp19I	CCATGG	1 cut(s)	699
Bsp68I	TCGCGA	1 cut(s)	1572
BspACI	CCGC	4 cut(s)	164, 629, 918, 1116
BspANI	GGCC	3 cut(s)	43, 698, 1245
BspCNI	CTCAG	4 cut(s)	430, 816, 862, 949
BspDI	ATCGAT	1 cut(s)	1527
BspFNI	CGCG	1 cut(s)	1572
BspLI	GGNNCC	4 cut(s)	168, 378, 535, 1218
BspMAI	CTGCAG	1 cut(s)	89
BspPI	GGATC	3 cut(s)	763, 1551, 1568
BspQI	GCTCTTC	1 cut(s)	1335
BspT104I	TTCGAA	1 cut(s)	329
BspT107I	GGYRCC	2 cut(s)	166, 1216
BsrDI	GCAATG	1 cut(s)	362
BsrI	ACTGG	2 cut(s)	23, 713
BssECI	CCNNGG	4 cut(s)	699, 982, 1240, 1270
BssMI	GATC	5 cut(s)	755, 869, 1279, 1543, 1573
BssSI	CACGAG	1 cut(s)	1392
BssT1I	CCWWGG	1 cut(s)	699
Bst2BI	CACGAG	1 cut(s)	1392
Bst2UI	CCWGG	4 cut(s)	984, 1221, 1242, 1536
Bst4CI	ACNGT	1 cut(s)	1491
Bst6I	CTCTTC	4 cut(s)	112, 1245, 1335, 1562
BstBAI	YACGTR	2 cut(s)	1520, 1588
BstBI	TTCGAA	1 cut(s)	329
BstC8I	GCNNGC	1 cut(s)	1443
BstDEI	CTNAG	5 cut(s)	438, 659, 824, 849, 936
BstDSI	CCRYGG	2 cut(s)	699, 1270
BstENI	CCTNNNNNAGG	1 cut(s)	1250
BstF5I	GGATG	7 cut(s)	72, 223, 524, 631, 638, 811, 1057
BstFNI	CGCG	1 cut(s)	1572
BstKTI	GATC	5 cut(s)	758, 872, 1282, 1546, 1576
BstMAI	GTCTC	1 cut(s)	204
BstMBI	GATC	5 cut(s)	755, 869, 1279, 1543, 1573
BstMWI	GCNNNNNNNGC	3 cut(s)	469, 676, 779
BstNI	CCWGG	4 cut(s)	984, 1221, 1242, 1536
BstSCI	CCNGG	4 cut(s)	982, 1219, 1240, 1534
BstSFI	CTRYAG	3 cut(s)	85, 111, 1334
BstUI	CGCG	1 cut(s)	1572
BstV1I	GCAGC	3 cut(s)	99, 679, 1103
BstX2I	RGATCY	1 cut(s)	755
BstYI	RGATCY	1 cut(s)	755
Bsu15I	ATCGAT	1 cut(s)	1527
BsuI	GTATCC	1 cut(s)	567
BsuRI	GGCC	3 cut(s)	43, 698, 1245
BsuTUI	ATCGAT	1 cut(s)	1527
BtgI	CCRYGG	2 cut(s)	699, 1270
BtsCI	GGATG	7 cut(s)	72, 223, 524, 631, 638, 811, 1057
BtsI	GCAGTG	4 cut(s)	82, 643, 1094, 1146
BtsIMutI	CAGTG	5 cut(s)	82, 643, 1094, 1146, 1503
BtuMI	TCGCGA	1 cut(s)	1572
Cac8I	GCNNGC	1 cut(s)	1443
Cfr13I	GGNCC	1 cut(s)	534
ClaI	ATCGAT	1 cut(s)	1527
CseI	GACGC	3 cut(s)	368, 452, 668
Csp6I	GTAC	2 cut(s)	1364, 1585
CspCI	CAANNNNNGTGG	2 cut(s)	577, 612
CviAII	CATG	7 cut(s)	214, 307, 347, 700, 1213, 1450, 1547
CviQI	GTAC	2 cut(s)	1364, 1585
DdeI	CTNAG	5 cut(s)	438, 659, 824, 849, 936
DpnI	GATC	5 cut(s)	757, 871, 1281, 1545, 1575
DpnII	GATC	5 cut(s)	755, 869, 1279, 1543, 1573
EaeI	YGGCCR	1 cut(s)	41
Eam1104I	CTCTTC	4 cut(s)	112, 1245, 1335, 1562
EarI	CTCTTC	4 cut(s)	112, 1245, 1335, 1562
Eco130I	CCWWGG	1 cut(s)	699
Eco47I	GGWCC	1 cut(s)	534
Eco72I	CACGTG	1 cut(s)	1520
EcoNI	CCTNNNNNAGG	1 cut(s)	1250
EcoRII	CCWGG	4 cut(s)	982, 1219, 1240, 1534
EcoT14I	CCWWGG	1 cut(s)	699
ErhI	CCWWGG	1 cut(s)	699
FaeI	CATG	7 cut(s)	217, 310, 350, 703, 1216, 1453, 1550
FalI	AAGNNNNNCTT	4 cut(s)	998, 1030, 1242, 1274
FaqI	GGGAC	1 cut(s)	371
FatI	CATG	7 cut(s)	213, 306, 346, 699, 1212, 1449, 1546
FauI	CCCGC	1 cut(s)	622
FblI	GTMKAC	1 cut(s)	486
Fnu4HI	GCNGC	4 cut(s)	88, 165, 668, 1092
FokI	GGATG	7 cut(s)	79, 230, 531, 638, 645, 818, 1064
Fsp4HI	GCNGC	4 cut(s)	88, 165, 668, 1092
FspBI	CTAG	4 cut(s)	174, 236, 402, 566
GluI	GCNGC	4 cut(s)	88, 165, 668, 1092
GsaI	CCCAGC	1 cut(s)	8
GsuI	CTGGAG	3 cut(s)	6, 696, 1281
HaeIII	GGCC	3 cut(s)	43, 698, 1245
HapII	CCGG	2 cut(s)	186, 1231
HgaI	GACGC	3 cut(s)	368, 452, 668
Hin1II	CATG	7 cut(s)	217, 310, 350, 703, 1216, 1453, 1550
HinfI	GANTC	8 cut(s)	104, 122, 310, 331, 442, 545, 1433, 1524
HpaII	CCGG	2 cut(s)	186, 1231
HphI	GGTGA	2 cut(s)	246, 1453
Hpy166II	GTNNAC	2 cut(s)	487, 1461
Hpy188I	TCNGA	5 cut(s)	468, 553, 648, 1284, 1477
Hpy188III	TCNNGA	8 cut(s)	402, 510, 560, 1196, 1205, 1298, 1430, 1571
Hpy8I	GTNNAC	2 cut(s)	487, 1461
HpyAV	CCTTC	6 cut(s)	269, 345, 367, 570, 950, 1447
HpyCH4III	ACNGT	1 cut(s)	1491
HpyCH4IV	ACGT	2 cut(s)	1519, 1587
HpyF10VI	GCNNNNNNNGC	3 cut(s)	469, 676, 779
HpyF3I	CTNAG	5 cut(s)	438, 659, 824, 849, 936
HpySE526I	ACGT	2 cut(s)	1519, 1587
Hsp92II	CATG	7 cut(s)	217, 310, 350, 703, 1216, 1453, 1550
Kzo9I	GATC	5 cut(s)	755, 869, 1279, 1543, 1573
LguI	GCTCTTC	1 cut(s)	1335
LmnI	GCTCC	4 cut(s)	19, 25, 715, 787
Lsp1109I	GCAGC	3 cut(s)	99, 679, 1103
LweI	GCATC	4 cut(s)	88, 616, 623, 1523
MaeI	CTAG	4 cut(s)	174, 236, 402, 566
MaeII	ACGT	2 cut(s)	1519, 1587
MaeIII	GTNAC	5 cut(s)	119, 406, 910, 1123, 1144
MalI	GATC	5 cut(s)	757, 871, 1281, 1545, 1575
MboI	GATC	5 cut(s)	755, 869, 1279, 1543, 1573
MboII	GAAGA	9 cut(s)	99, 298, 301, 304, 821, 1199, 1262, 1322, 1549
MfeI	CAATTG	2 cut(s)	270, 1022
MflI	RGATCY	1 cut(s)	755
MlsI	TGGCCA	1 cut(s)	43
MluNI	TGGCCA	1 cut(s)	43
MlyI	GAGTC	4 cut(s)	98, 116, 319, 451
MmeI	TCCRAC	1 cut(s)	363
Mox20I	TGGCCA	1 cut(s)	43
MroXI	GAANNNNTTC	4 cut(s)	813, 1191, 1254, 1457
MscI	TGGCCA	1 cut(s)	43
MseI	TTAA	5 cut(s)	800, 1005, 1034, 1071, 1106
Msp20I	TGGCCA	1 cut(s)	43
MspA1I	CMGCKG	1 cut(s)	940
MspI	CCGG	2 cut(s)	186, 1231
MspR9I	CCNGG	4 cut(s)	984, 1221, 1242, 1536
MunI	CAATTG	2 cut(s)	270, 1022
Mva1269I	GAATGC	1 cut(s)	1230
MvaI	CCWGG	4 cut(s)	984, 1221, 1242, 1536
MvnI	CGCG	1 cut(s)	1572
MwoI	GCNNNNNNNGC	3 cut(s)	469, 676, 779
NcoI	CCATGG	1 cut(s)	699
NdeII	GATC	5 cut(s)	755, 869, 1279, 1543, 1573
NlaIII	CATG	7 cut(s)	217, 310, 350, 703, 1216, 1453, 1550
NlaIV	GGNNCC	4 cut(s)	168, 378, 535, 1218
NmuCI	GTSAC	2 cut(s)	119, 1144
NruI	TCGCGA	1 cut(s)	1572
NspV	TTCGAA	1 cut(s)	329
PciSI	GCTCTTC	1 cut(s)	1335
PctI	GAATGC	1 cut(s)	1230
PdmI	GAANNNNTTC	4 cut(s)	813, 1191, 1254, 1457
PfeI	GAWTC	4 cut(s)	331, 545, 1433, 1524
PkrI	GCNGC	4 cut(s)	89, 166, 669, 1093
PleI	GAGTC	4 cut(s)	98, 116, 318, 450
PmaCI	CACGTG	1 cut(s)	1520
PmlI	CACGTG	1 cut(s)	1520
PpsI	GAGTC	4 cut(s)	98, 116, 318, 450
Ppu21I	YACGTR	2 cut(s)	1520, 1588
Psp6I	CCWGG	4 cut(s)	982, 1219, 1240, 1534
PspCI	CACGTG	1 cut(s)	1520
PspFI	CCCAGC	1 cut(s)	4
PspGI	CCWGG	4 cut(s)	982, 1219, 1240, 1534
PspN4I	GGNNCC	4 cut(s)	168, 378, 535, 1218
PspPI	GGNCC	1 cut(s)	534
PstI	CTGCAG	1 cut(s)	89
PsuI	RGATCY	1 cut(s)	755
PvuII	CAGCTG	1 cut(s)	940
RruI	TCGCGA	1 cut(s)	1572
RsaI	GTAC	2 cut(s)	1365, 1586
RsaNI	GTAC	2 cut(s)	1364, 1585
SapI	GCTCTTC	1 cut(s)	1335
SaqAI	TTAA	5 cut(s)	800, 1005, 1034, 1071, 1106
SatI	GCNGC	4 cut(s)	88, 165, 668, 1092
Sau3AI	GATC	5 cut(s)	755, 869, 1279, 1543, 1573
Sau96I	GGNCC	1 cut(s)	534
SchI	GAGTC	4 cut(s)	98, 116, 319, 451
ScrFI	CCNGG	4 cut(s)	984, 1221, 1242, 1536
SfaNI	GCATC	4 cut(s)	88, 616, 623, 1523
SfcI	CTRYAG	3 cut(s)	85, 111, 1334
SfuI	TTCGAA	1 cut(s)	329
SinI	GGWCC	1 cut(s)	534
SmlI	CTYRAG	1 cut(s)	1428
SmoI	CTYRAG	1 cut(s)	1428
SsiI	CCGC	4 cut(s)	164, 629, 918, 1116
SspMI	CTAG	4 cut(s)	174, 236, 402, 566
StyD4I	CCNGG	4 cut(s)	982, 1219, 1240, 1534
StyI	CCWWGG	1 cut(s)	699
TaaI	ACNGT	1 cut(s)	1491
TaiI	ACGT	2 cut(s)	1522, 1590
TaqI	TCGA	5 cut(s)	329, 610, 988, 1527, 1560
TatI	WGTACW	1 cut(s)	1363
TauI	GCSGC	1 cut(s)	167
TfiI	GAWTC	4 cut(s)	331, 545, 1433, 1524
Tru1I	TTAA	5 cut(s)	800, 1005, 1034, 1071, 1106
Tru9I	TTAA	5 cut(s)	800, 1005, 1034, 1071, 1106
TscAI	CASTG	5 cut(s)	89, 643, 1101, 1153, 1510
TseFI	GTSAC	2 cut(s)	119, 1144
TseI	GCWGC	3 cut(s)	87, 667, 1091
Tsp45I	GTSAC	2 cut(s)	119, 1144
TspDTI	ATGAA	6 cut(s)	234, 246, 537, 822, 1403, 1466
TspGWI	ACGGA	2 cut(s)	107, 526
TspRI	CASTG	5 cut(s)	89, 643, 1101, 1153, 1510
VpaK11BI	GGWCC	1 cut(s)	534
XagI	CCTNNNNNAGG	1 cut(s)	1250
XapI	RAATTY	2 cut(s)	881, 1030
XbaI	TCTAGA	1 cut(s)	401
XcmI	CCANNNNNNNNNTGG	1 cut(s)	755
XmiI	GTMKAC	1 cut(s)	486
XmnI	GAANNNNTTC	4 cut(s)	813, 1191, 1254, 1457
XspI	CTAG	4 cut(s)	174, 236, 402, 566

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.