Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002447

Physical Location & Seq

Genomic Coordinates Reverse (-)

2566196 .. 2569700

Gene Structure 3505 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G08040.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

ATGACGGAAACTGGTGATGATCTTGCTACGGTGAAGAAGCCAATCCCATTTCTCGTTATCTTCAAAGATTTAAGACATGTATTCAGTAGGGACACAACTGGGCGAGAGATTCTAGGCATCGCGTTTCCAGCAGCTTTGGCTTTAGCTGCTGATCCAATCGCTTCTCTGATTGATACCGCTTTTGTCGGGCGTTTAGGAGCGGTTCAGCTAGCGGCGGTTGGAGTTTCCATTGCCATATTCAATCAAGCTTCTAGAATTACGATATTCCCACTTGTGAGCCTCACAACTTCATTTGTGGCAGAGGAAGACACGATGGAGAAGATGAAAGAAGAAGCAAACAAAGCCAATCTTGTTCATGCAGAAACTATACTTGTTCAAGATTCTTTGGAAAAGGGCATTTCTTCACCTACAAGTAACGATACCAACCAGCCACAGCAACCTCCAGCTCCGGATACAAAGTCAAATAGCGGAAACAAATCGAATAAAAAGGAGAAGAGGACCATTAGAACAGCATCAACAGCTATGATCTTGGGGTTAATCCTTGGCCTTGTGCAAGCTATTTTCTTGATTTTCAGTTCAAAGTTGCTTCTAGGCGTCATGGGAGTGAAACCAAATTCACCAATGTTATCACCAGCACACAAGTACTTGAGCATACGAGCTTTGGGGGCTCCTGCATTGCTTCTATCTCTTGCTATGCAAGGCATCTTTCGTGGATTCAAGGACACCAAAACTCCTCTCTTTGCCACTGTCGTAGCAGATGTTATCAACATAGTTCTCGACCCCATCTTCATTTTTGTGCTTCGTCTAGGGATCATCGGTGCAGCCATTGCCCATGTCATTTCTCAGTACTTCATGACTCTAATATTGTTCGTCTTCCTCGCAAAGAAAGTTAATTTGATTCCACCAAACTTCGGGGATTTGCAGTTTGGAAGGTTCCTTAAAAATGGGCTACTATTGCTGGCGAGGACCATAGCAGTGACGTTTTGTCAGACCTTAGCAGCAGCAATGGCGGCGCGGCTGGGTACAACACCAATGGCTGCTTTTCAGATTTGTTTACAAGTATGGTTAACTTCTTCTCTTCTCAATGATGGTCTTGCCGTTGCTGGTCAGGCGATTCTGGCTTGTTCGTTTGCTGAGAAGGACTATAACAAAGTGACTGCTGTTGCATCCCGTGTTCTACAGATGGGTTTTGTGTTAGGACTTGGACTGTCCGTTTTTGTTGGACTAGGTCTCTACTTTGGTGCCGGAGTTTTCTCCAAGGACCCTGCTGTTATTCACCTCATGGCCATCGGAATACCGTTTATAGCAGCAACGCAGCCAATAAACTCTCTCGCCTTTGTATTGGATGGAGTCAATTTTGGAGCATCTGATTTTGCTTACACTGCATACTCCATGGTGGGAGTGGCGGCCATAAGCATTGCAGCAGTAATATATATGGCAAAGACCAATGGTTTCATAGGAATATGGATAGCTCTTACAATCTATATGGCTCTCCGGGCTATTACTGGAATTGCCAGGATGGCGACAGGAACTGGACCGTGGAGGTTCTTGCGTGGACGATCATCCTCTTCATCTTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006820 GO:0006842 GO:0006855 GO:0006873 GO:0006875 GO:0006879 GO:0006950 GO:0006979 GO:0007154 GO:0008150 GO:0008324 GO:0008509 GO:0008514 GO:0009267 GO:0009605 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0015075 GO:0015137 GO:0015142 GO:0015238 GO:0015318 GO:0015711 GO:0015746 GO:0015849 GO:0015893 GO:0016020 GO:0016036 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0031667 GO:0031668 GO:0031669 GO:0032870 GO:0033554 GO:0033993 GO:0034220 GO:0034599 GO:0034614 GO:0035674 GO:0035690 GO:0042221 GO:0042493 GO:0042592 GO:0042594 GO:0042891 GO:0042895 GO:0044464 GO:0046873 GO:0046916 GO:0046942 GO:0046943 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071369 GO:0071495 GO:0071496 GO:0071702 GO:0071731 GO:0071732 GO:0071944 GO:0097305 GO:0097366 GO:0098655 GO:0098656 GO:0098771 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902170 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

526

Amino Acids

55.95

Weight (kDa)

9.63

Isoelectric Point (pI)

29.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	58 - 158	2.9e-16	MatE
MatE	PF01554	219 - 367	2e-11	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002447)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08040 AT3G08040
fragaria_vesca	FvH4_7g01040 FvH4_7g01040 FvH4_7g01040 FvH4_7g01040 FvH4_7g01040
malus_domestica	MD02G1311900.v1.1 MD07G1010700.v1.1
prunus_persica	Prupe.2G013000_v2.0.a1 Prupe.2G013000_v2.0.a1 Prupe.2G013000_v2.0.a1 Prupe.2G013100_v2.0.a1
pyrus_communis	pycom02g26180 pycom07g00880
rosa_chinensis	RchiOBHm_Chr1g0315981 RchiOBHm_Chr1g0316021
rosa_laevigata	RLG00000030710 RLG00000030716 RLG00000030718
rosa_multiflora	Rmu_sc0002014.1_g000023 Rmu_sc0002531.1_g000056 Rmu_sc0004566.1_g000010 Rmu_sc0005954.1_g000026
rosa_roxburghii	Rroxscaffold_4G00331210 Rroxscaffold_4G00331270
rosa_rugosa	Rorug01G0007300 Rorug01G0007400 Rorug01G0007500 Rorug01G0007600 Rorug01G0008000 Rorug01G0008100
rosa_samantha	Rh1AG018100 Rh1BG011500 Rh1BG012100 Rh1CG015400 Rh1CG015900 Rh1DG011200 Rh1DG012000
rosa_wichuraiana	Rw1G001120 Rw1G001160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1241
AccBSI	CCGCTC	1 cut(s)	200
AccII	CGCG	2 cut(s)	122, 1015
AccIII	TCCGGA	1 cut(s)	448
AciI	CCGC	8 cut(s)	177, 200, 212, 215, 468, 1010, 1015, 1406
AclWI	GGATC	2 cut(s)	146, 818
AcoI	YGGCCR	2 cut(s)	1284, 1407
AcsI	RAATTY	1 cut(s)	613
AcyI	GRCGYC	1 cut(s)	594
AfaI	GTAC	3 cut(s)	644, 848, 1024
AfiI	CCNNNNNNNGG	1 cut(s)	911
AflIII	ACRYGT	1 cut(s)	76
AgsI	TTSAA	5 cut(s)	64, 241, 377, 579, 718
AhdI	GACNNNNNGTC	1 cut(s)	984
AjnI	CCWGG	1 cut(s)	1514
AluBI	AGCT	9 cut(s)	134, 146, 208, 248, 446, 521, 557, 659, 1472
AluI	AGCT	9 cut(s)	134, 146, 208, 248, 446, 521, 557, 659, 1472
Alw26I	GTCTC	1 cut(s)	1235
AlwI	GGATC	2 cut(s)	146, 818
AlwNI	CAGNNNCTG	1 cut(s)	1532
Aor13HI	TCCGGA	1 cut(s)	448
AoxI	GGCC	3 cut(s)	544, 1284, 1407
ApeKI	GCWGC	9 cut(s)	131, 146, 821, 998, 1001, 1037, 1307, 1315, 1421
ApoI	RAATTY	1 cut(s)	613
AspLEI	GCGC	1 cut(s)	1015
AspS9I	GGNCC	4 cut(s)	498, 966, 1261, 1535
AsuC2I	CCSGG	1 cut(s)	1496
AsuHPI	GGTGA	6 cut(s)	26, 43, 396, 609, 621, 1268
AsuNHI	GCTAGC	1 cut(s)	208
AvaII	GGWCC	4 cut(s)	498, 966, 1261, 1535
BalI	TGGCCA	1 cut(s)	1286
BanI	GGYRCC	1 cut(s)	1241
BanII	GRGCYC	1 cut(s)	670
BbsI	GAAGAC	2 cut(s)	312, 865
BbvI	GCAGC	9 cut(s)	133, 143, 833, 1010, 1013, 1024, 1319, 1327, 1433
BccI	CCATC	7 cut(s)	307, 791, 1082, 1177, 1295, 1340, 1513
BceAI	ACGGC	1 cut(s)	1082
BciT130I	CCWGG	1 cut(s)	1516
BciVI	GTATCC	1 cut(s)	445
BcnI	CCSGG	1 cut(s)	1496
BcoDI	GTCTC	1 cut(s)	1235
BfaI	CTAG	7 cut(s)	113, 209, 252, 590, 806, 1226, 1579
BfmI	CTRYAG	1 cut(s)	1178
BfuI	GTATCC	1 cut(s)	445
BglI	GCCNNNNNGGC	1 cut(s)	1520
BmcAI	AGTACT	2 cut(s)	644, 848
Bme1390I	CCNGG	2 cut(s)	1496, 1516
Bme18I	GGWCC	4 cut(s)	498, 966, 1261, 1535
BmeRI	GACNNNNNGTC	1 cut(s)	984
BmgT120I	GGNCC	4 cut(s)	498, 966, 1261, 1535
BmiI	GGNNCC	4 cut(s)	669, 935, 1243, 1263
BmrFI	CCNGG	2 cut(s)	1496, 1516
BmrI	ACTGGG	1 cut(s)	108
BmsI	GCATC	5 cut(s)	126, 521, 711, 1175, 1373
BmtI	GCTAGC	1 cut(s)	212
BmuI	ACTGGG	1 cut(s)	108
BpiI	GAAGAC	2 cut(s)	312, 865
BpmI	CTGGAG	1 cut(s)	426
Bpu10I	CCTNAGC	1 cut(s)	994
BpuEI	CTTGAG	1 cut(s)	667
BpuMI	CCSGG	1 cut(s)	1496
BsaHI	GRCGYC	1 cut(s)	594
BsaI	GGTCTC	1 cut(s)	1235
BsaJI	CCNNGG	4 cut(s)	541, 1257, 1392, 1538
BsaWI	WCCGGW	1 cut(s)	448
BsaXI	ACNNNNNCTCC	2 cut(s)	715, 745
Bsc4I	CCNNNNNNNGG	1 cut(s)	911
Bse1I	ACTGG	4 cut(s)	16, 103, 1510, 1537
Bse3DI	GCAATG	5 cut(s)	228, 674, 825, 1011, 1416
BseAI	TCCGGA	1 cut(s)	448
BseBI	CCWGG	1 cut(s)	1516
BseDI	CCNNGG	4 cut(s)	541, 1257, 1392, 1538
BseGI	GGATG	4 cut(s)	1166, 1351, 1524, 1562
BseLI	CCNNNNNNNGG	1 cut(s)	911
BseMI	GCAATG	5 cut(s)	228, 674, 825, 1011, 1416
BseMII	CTCAG	2 cut(s)	857, 1125
BseNI	ACTGG	4 cut(s)	16, 103, 1510, 1537
BseRI	GAGGAG	1 cut(s)	723
BseXI	GCAGC	9 cut(s)	133, 143, 833, 1010, 1013, 1024, 1319, 1327, 1433
BseYI	CCCAGC	1 cut(s)	1018
BsgI	GTGCAG	1 cut(s)	840
Bsh1236I	CGCG	2 cut(s)	122, 1015
BshFI	GGCC	3 cut(s)	546, 1286, 1409
BshNI	GGYRCC	1 cut(s)	1241
BsiSI	CCGG	3 cut(s)	449, 1245, 1495
BslFI	GGGAC	1 cut(s)	104
BslI	CCNNNNNNNGG	1 cut(s)	911
BsmAI	GTCTC	1 cut(s)	1235
BsmFI	GGGAC	1 cut(s)	104
BsnI	GGCC	3 cut(s)	546, 1286, 1409
Bso31I	GGTCTC	1 cut(s)	1235
Bsp1286I	GDGCHC	1 cut(s)	670
Bsp13I	TCCGGA	1 cut(s)	448
Bsp143I	GATC	5 cut(s)	19, 151, 525, 810, 1559
Bsp19I	CCATGG	1 cut(s)	1392
BspACI	CCGC	8 cut(s)	177, 200, 212, 215, 468, 1010, 1015, 1406
BspANI	GGCC	3 cut(s)	546, 1286, 1409
BspCNI	CTCAG	2 cut(s)	856, 1126
BspEI	TCCGGA	1 cut(s)	448
BspFNI	CGCG	2 cut(s)	122, 1015
BspHI	TCATGA	1 cut(s)	852
BspLI	GGNNCC	4 cut(s)	669, 935, 1243, 1263
BspOI	GCTAGC	1 cut(s)	212
BspPI	GGATC	2 cut(s)	146, 818
BspT107I	GGYRCC	1 cut(s)	1241
BspTNI	GGTCTC	1 cut(s)	1235
BsrBI	CCGCTC	1 cut(s)	200
BsrDI	GCAATG	5 cut(s)	228, 674, 825, 1011, 1416
BsrI	ACTGG	4 cut(s)	16, 103, 1510, 1537
BssECI	CCNNGG	4 cut(s)	541, 1257, 1392, 1538
BssMI	GATC	5 cut(s)	19, 151, 525, 810, 1559
BssNI	GRCGYC	1 cut(s)	594
BssT1I	CCWWGG	3 cut(s)	541, 1257, 1392
Bst2UI	CCWGG	1 cut(s)	1516
Bst4CI	ACNGT	5 cut(s)	31, 748, 1209, 1299, 1539
Bst6I	CTCTTC	3 cut(s)	488, 1083, 1573
BstACI	GRCGYC	1 cut(s)	594
BstAPI	GCANNNNNTGC	1 cut(s)	827
BstC8I	GCNNGC	3 cut(s)	210, 555, 960
BstDEI	CTNAG	3 cut(s)	843, 994, 1134
BstDSI	CCRYGG	2 cut(s)	1392, 1538
BstF5I	GGATG	4 cut(s)	1166, 1351, 1524, 1562
BstFNI	CGCG	2 cut(s)	122, 1015
BstHHI	GCGC	1 cut(s)	1015
BstKTI	GATC	5 cut(s)	22, 154, 528, 813, 1562
BstMAI	GTCTC	1 cut(s)	1235
BstMBI	GATC	5 cut(s)	19, 151, 525, 810, 1559
BstNI	CCWGG	1 cut(s)	1516
BstNSI	RCATGY	1 cut(s)	80
BstSCI	CCNGG	2 cut(s)	1494, 1514
BstSFI	CTRYAG	1 cut(s)	1178
BstUI	CGCG	2 cut(s)	122, 1015
BstV1I	GCAGC	9 cut(s)	133, 143, 833, 1010, 1013, 1024, 1319, 1327, 1433
BstV2I	GAAGAC	2 cut(s)	312, 865
BsuI	GTATCC	1 cut(s)	445
BsuRI	GGCC	3 cut(s)	546, 1286, 1409
BtgI	CCRYGG	2 cut(s)	1392, 1538
BtgZI	GCGATG	1 cut(s)	103
BtsCI	GGATG	4 cut(s)	1166, 1351, 1524, 1562
BtsI	GCAGTG	2 cut(s)	981, 1380
BtsIMutI	CAGTG	3 cut(s)	744, 981, 1380
Cac8I	GCNNGC	3 cut(s)	210, 555, 960
CaiI	CAGNNNCTG	1 cut(s)	1532
CciI	TCATGA	1 cut(s)	852
CfoI	GCGC	1 cut(s)	1015
Cfr13I	GGNCC	4 cut(s)	498, 966, 1261, 1535
CseI	GACGC	1 cut(s)	583
Csp6I	GTAC	3 cut(s)	643, 847, 1023
CviAII	CATG	7 cut(s)	77, 356, 598, 833, 853, 1282, 1393
CviQI	GTAC	3 cut(s)	643, 847, 1023
DdeI	CTNAG	3 cut(s)	843, 994, 1134
DpnI	GATC	5 cut(s)	21, 153, 527, 812, 1561
DpnII	GATC	5 cut(s)	19, 151, 525, 810, 1559
DriI	GACNNNNNGTC	1 cut(s)	984
EaeI	YGGCCR	2 cut(s)	1284, 1407
Eam1104I	CTCTTC	3 cut(s)	488, 1083, 1573
Eam1105I	GACNNNNNGTC	1 cut(s)	984
EarI	CTCTTC	3 cut(s)	488, 1083, 1573
Eco130I	CCWWGG	3 cut(s)	541, 1257, 1392
Eco24I	GRGCYC	1 cut(s)	670
Eco31I	GGTCTC	1 cut(s)	1235
Eco47I	GGWCC	4 cut(s)	498, 966, 1261, 1535
EcoO109I	RGGNCCY	1 cut(s)	1261
EcoRII	CCWGG	1 cut(s)	1514
EcoT14I	CCWWGG	3 cut(s)	541, 1257, 1392
EcoT38I	GRGCYC	1 cut(s)	670
ErhI	CCWWGG	3 cut(s)	541, 1257, 1392
FaeI	CATG	7 cut(s)	80, 359, 601, 836, 856, 1285, 1396
FalI	AAGNNNNNCTT	2 cut(s)	333, 365
FaqI	GGGAC	1 cut(s)	104
FatI	CATG	7 cut(s)	76, 355, 597, 832, 852, 1281, 1392
FokI	GGATG	4 cut(s)	1153, 1358, 1531, 1549
FriOI	GRGCYC	1 cut(s)	670
FspBI	CTAG	7 cut(s)	113, 209, 252, 590, 806, 1226, 1579
GlaI	GCGC	1 cut(s)	1014
GsaI	CCCAGC	1 cut(s)	1022
GsuI	CTGGAG	1 cut(s)	426
HaeIII	GGCC	3 cut(s)	546, 1286, 1409
HapII	CCGG	3 cut(s)	449, 1245, 1495
HgaI	GACGC	1 cut(s)	583
HhaI	GCGC	1 cut(s)	1015
Hin1I	GRCGYC	1 cut(s)	594
Hin1II	CATG	7 cut(s)	80, 359, 601, 836, 856, 1285, 1396
Hin6I	GCGC	1 cut(s)	1013
HinP1I	GCGC	1 cut(s)	1013
HincII	GTYRAC	1 cut(s)	1068
HindII	GTYRAC	1 cut(s)	1068
HindIII	AAGCTT	1 cut(s)	246
HinfI	GANTC	7 cut(s)	109, 380, 714, 856, 898, 1114, 1350
HpaI	GTTAAC	1 cut(s)	1068
HpaII	CCGG	3 cut(s)	449, 1245, 1495
HphI	GGTGA	6 cut(s)	26, 43, 396, 609, 621, 1268
Hpy166II	GTNNAC	3 cut(s)	1055, 1068, 1556
Hpy188I	TCNGA	5 cut(s)	168, 990, 1047, 1292, 1369
Hpy188III	TCNNGA	6 cut(s)	252, 377, 449, 565, 776, 853
Hpy8I	GTNNAC	3 cut(s)	1055, 1068, 1556
HpyAV	CCTTC	2 cut(s)	924, 1132
HpyCH4III	ACNGT	5 cut(s)	31, 748, 1209, 1299, 1539
HpyCH4IV	ACGT	1 cut(s)	980
HpyCH4V	TGCA	9 cut(s)	359, 553, 674, 697, 821, 922, 1166, 1385, 1421
HpyF3I	CTNAG	3 cut(s)	843, 994, 1134
HpySE526I	ACGT	1 cut(s)	980
Hsp92I	GRCGYC	1 cut(s)	594
Hsp92II	CATG	7 cut(s)	80, 359, 601, 836, 856, 1285, 1396
HspAI	GCGC	1 cut(s)	1013
Kpn2I	TCCGGA	1 cut(s)	448
KspAI	GTTAAC	1 cut(s)	1068
Kzo9I	GATC	5 cut(s)	19, 151, 525, 810, 1559
LmnI	GCTCC	4 cut(s)	197, 451, 673, 1361
Lsp1109I	GCAGC	9 cut(s)	133, 143, 833, 1010, 1013, 1024, 1319, 1327, 1433
LweI	GCATC	5 cut(s)	126, 521, 711, 1175, 1373
MaeI	CTAG	7 cut(s)	113, 209, 252, 590, 806, 1226, 1579
MaeII	ACGT	1 cut(s)	980
MaeIII	GTNAC	3 cut(s)	413, 976, 1153
MalI	GATC	5 cut(s)	21, 153, 527, 812, 1561
MbiI	CCGCTC	1 cut(s)	200
MboI	GATC	5 cut(s)	19, 151, 525, 810, 1559
MhlI	GDGCHC	1 cut(s)	670
MlsI	TGGCCA	1 cut(s)	1286
MluCI	AATT	5 cut(s)	255, 613, 892, 1354, 1509
MluNI	TGGCCA	1 cut(s)	1286
MlyI	GAGTC	2 cut(s)	850, 1359
MmeI	TCCRAC	2 cut(s)	199, 1201
Mox20I	TGGCCA	1 cut(s)	1286
MroI	TCCGGA	1 cut(s)	448
MscI	TGGCCA	1 cut(s)	1286
MseI	TTAA	5 cut(s)	71, 536, 891, 939, 1067
MslI	CAYNNNNRTG	3 cut(s)	602, 794, 974
Msp20I	TGGCCA	1 cut(s)	1286
MspI	CCGG	3 cut(s)	449, 1245, 1495
MspR9I	CCNGG	2 cut(s)	1496, 1516
MvaI	CCWGG	1 cut(s)	1516
MvnI	CGCG	2 cut(s)	122, 1015
NciI	CCSGG	1 cut(s)	1496
NcoI	CCATGG	1 cut(s)	1392
NdeII	GATC	5 cut(s)	19, 151, 525, 810, 1559
NheI	GCTAGC	1 cut(s)	208
NlaIII	CATG	7 cut(s)	80, 359, 601, 836, 856, 1285, 1396
NlaIV	GGNNCC	4 cut(s)	669, 935, 1243, 1263
NmuCI	GTSAC	2 cut(s)	976, 1153
NspI	RCATGY	1 cut(s)	80
PagI	TCATGA	1 cut(s)	852
PciI	ACATGT	1 cut(s)	76
PfeI	GAWTC	5 cut(s)	109, 380, 714, 898, 1114
PflFI	GACNNNGTC	1 cut(s)	1227
PleI	GAGTC	2 cut(s)	850, 1358
PpsI	GAGTC	2 cut(s)	850, 1358
PpuMI	RGGWCCY	1 cut(s)	1261
PscI	ACATGT	1 cut(s)	76
Psp5II	RGGWCCY	1 cut(s)	1261
Psp6I	CCWGG	1 cut(s)	1514
PspFI	CCCAGC	1 cut(s)	1018
PspGI	CCWGG	1 cut(s)	1514
PspN4I	GGNNCC	4 cut(s)	669, 935, 1243, 1263
PspPI	GGNCC	4 cut(s)	498, 966, 1261, 1535
PspPPI	RGGWCCY	1 cut(s)	1261
PstNI	CAGNNNCTG	1 cut(s)	1532
PsyI	GACNNNGTC	1 cut(s)	1227
RsaI	GTAC	3 cut(s)	644, 848, 1024
RsaNI	GTAC	3 cut(s)	643, 847, 1023
RseI	CAYNNNNRTG	3 cut(s)	602, 794, 974
SaqAI	TTAA	5 cut(s)	71, 536, 891, 939, 1067
Sau3AI	GATC	5 cut(s)	19, 151, 525, 810, 1559
Sau96I	GGNCC	4 cut(s)	498, 966, 1261, 1535
ScaI	AGTACT	2 cut(s)	644, 848
SchI	GAGTC	2 cut(s)	850, 1359
ScrFI	CCNGG	2 cut(s)	1496, 1516
SduI	GDGCHC	1 cut(s)	670
SfaNI	GCATC	5 cut(s)	126, 521, 711, 1175, 1373
SfcI	CTRYAG	1 cut(s)	1178
SinI	GGWCC	4 cut(s)	498, 966, 1261, 1535
SmiMI	CAYNNNNRTG	3 cut(s)	602, 794, 974
SmlI	CTYRAG	1 cut(s)	646
SmoI	CTYRAG	1 cut(s)	646
Sse9I	AATT	5 cut(s)	255, 613, 892, 1354, 1509
SsiI	CCGC	8 cut(s)	177, 200, 212, 215, 468, 1010, 1015, 1406
SspI	AATATT	1 cut(s)	864
SspMI	CTAG	7 cut(s)	113, 209, 252, 590, 806, 1226, 1579
StyD4I	CCNGG	2 cut(s)	1494, 1514
StyI	CCWWGG	3 cut(s)	541, 1257, 1392
TaaI	ACNGT	5 cut(s)	31, 748, 1209, 1299, 1539
TaiI	ACGT	1 cut(s)	983
TaqI	TCGA	2 cut(s)	479, 777
TasI	AATT	5 cut(s)	255, 613, 892, 1354, 1509
TatI	WGTACW	2 cut(s)	642, 846
TauI	GCSGC	4 cut(s)	215, 1013, 1018, 1409
TfiI	GAWTC	5 cut(s)	109, 380, 714, 898, 1114
Tru1I	TTAA	5 cut(s)	71, 536, 891, 939, 1067
Tru9I	TTAA	5 cut(s)	71, 536, 891, 939, 1067
TscAI	CASTG	3 cut(s)	751, 981, 1387
TseFI	GTSAC	2 cut(s)	976, 1153
TseI	GCWGC	9 cut(s)	131, 146, 821, 998, 1001, 1037, 1307, 1315, 1421
Tsp45I	GTSAC	2 cut(s)	976, 1153
TspDTI	ATGAA	7 cut(s)	279, 338, 344, 778, 841, 1444, 1560
TspGWI	ACGGA	2 cut(s)	20, 1201
TspRI	CASTG	3 cut(s)	751, 981, 1387
Tth111I	GACNNNGTC	1 cut(s)	1227
VpaK11BI	GGWCC	4 cut(s)	498, 966, 1261, 1535
XapI	RAATTY	1 cut(s)	613
XbaI	TCTAGA	1 cut(s)	251
XceI	RCATGY	1 cut(s)	80
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1399
XspI	CTAG	7 cut(s)	113, 209, 252, 590, 806, 1226, 1579
ZrmI	AGTACT	2 cut(s)	644, 848

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.