Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0002447

Physical Location & Seq

Genomic Coordinates Reverse (-)

36700924 .. 36705209

Gene Structure 4286 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1311900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGCAAGGTATACAGCGTGTTTTCAAATGGGATACGCTCGGGAAGGAGATATTACAGATTGCATTCCCTGCCGCTCTCGCTGTAGCTGCTGATCCAGTTGCTTCTTTGATTGACACAGCATTCATTGGTCATATAGGTCCAGTGGAGCTTGCAGCAGCAGGAGTATCTATTGCCCTATTCAACCAGGCTTCAAGGATTACTATATTCCCATTAGTCAGTATTACGACTTCCTTTGTTGCCGAGGAAGATACTGTTGCGAAAATGAACGTGGAATCTGCGAAAGGTGAGAAGCGGGAAAAGAATTCAGATATGCTTGATGGCATGGAAAAAGGGGCTTCCAAACCAAAAGGTGATGATACACCTCAAAATGGTAAGCATCTAGGAAAGTTTTCACCTCAAAACAGTGGGATGGAAGAGGCTTCAACTGATGATATTGAGCGTGGGGAAGCGGGAAAAGGTGCCGCTGAAGCGAAAAGTGAGAGCTCGGACGAGGGACTAGCGAAAAATACTGATTCAAAGAAAGTCATATCGGAAAATGTTAAGCCTGAGATTGCAGAGAACGGTGCTGCTAAGAACAGTGTTCAACTAGAAAGTGGTTCCAAAACCACTATGGAAAAGCGTCCGTCAGATCTGATGAACAACAGTTTGAAGATAAAAATCAGGAAAAAGAAGCGACATATTGCTTCAGCGTCAACAGCACTCATCTTTGGGGCAATATTAGGCCTTTTACAAGCTATTTTTCTCATGCTTACAGCCAAAGTTCTCCTTGGTGTGATGGGGGTGAAACCGGGTTCCCCTATGCTAGCCCCGGCAAAGAAGTACTTGACAATAAGGTCGATCGGTGCACCTGCAGTTCTTCTCACATTGGCCATGCAAGGGATCTTCCGCGGCTTTAAGGATACAAAAACTCCTTTATATGTCATTGTTGTCGGATACGCAATTAACATTGCCTTGGATCCATTACTCATCTTTGTCTGCGGTTTGGGCATCAGAGGTGCAGCTATTGCACATGTTCTTTCTCAGTACTTGATGGCACTGGTACTCTTCATAATCTTAACCAAAAAAATTGATCTCTTACCTCCAAGTCTTAAAGATTTGCAGTTTGGTCGGTTTCTGAAGAACGGAACTCTATTGTTGGCTAGGGTGGTTGCTGTGACATTCTGTGTGACCTTGGCCGCATCCCTAGCGGCGCGGCTAGGACCAACTCCAATGGCTGCATTTCAGACTTGCTTGCAGGTCTGGTTGACATCATCTCTTCTTGCTGATGGTTTGGCGGTTGCAGGACAGGCTATTCTAGCATGTGCATTTGCTGAGAAAGACTACAAAAAGGCCGCAGCTACTGCAACCCGGGTTTTACAGATGAGCTTTATTCTTGGTGTGGGGCTTGCTCTTCTTGTTGGAATTGGTCTGTATTTTGGAGCTGGAGTCTTTTCTAGAGATGTTAACGTTTTGCACCTTATAAAGATTGGCCTCCCGTTTGTTGCAGCTACGCAACCGATCAATTCGCTGTCTTTTGTGTTTGATGGTGTGAACTTTGGAGCATCTGATTTTGCATATTCTGCATACTCATTGGTTCTGGTTGCCATAGCAAGCATTGTATCCTTGTTCCTCCTCTCAAAATCCCATGGTTTTGTTGGGATCTGGATTGCGTTAACCATTTATATGGCGTTACGTGCATTTGCTGGTGTATGGAGGATGGGGACTGGAACAGGACCTTGGCGTTTTCTCAAGGGTCGTTCACCACAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006820 GO:0006842 GO:0006855 GO:0006873 GO:0006875 GO:0006879 GO:0006950 GO:0006979 GO:0007154 GO:0008150 GO:0008324 GO:0008509 GO:0008514 GO:0009267 GO:0009605 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0015075 GO:0015137 GO:0015142 GO:0015238 GO:0015318 GO:0015711 GO:0015746 GO:0015849 GO:0015893 GO:0016020 GO:0016036 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0031667 GO:0031668 GO:0031669 GO:0032870 GO:0033554 GO:0033993 GO:0034220 GO:0034599 GO:0034614 GO:0035674 GO:0035690 GO:0042221 GO:0042493 GO:0042592 GO:0042594 GO:0042891 GO:0042895 GO:0044464 GO:0046873 GO:0046916 GO:0046942 GO:0046943 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071369 GO:0071495 GO:0071496 GO:0071702 GO:0071731 GO:0071732 GO:0071944 GO:0097305 GO:0097366 GO:0098655 GO:0098656 GO:0098771 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902170 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

583

Amino Acids

61.75

Weight (kDa)

9.54

Isoelectric Point (pI)

27.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	223 - 321	4.7e-14	MatE
MatE	PF01554	383 - 533	2.3e-11	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002447)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08040 AT3G08040
fragaria_vesca	FvH4_7g01040 FvH4_7g01040 FvH4_7g01040 FvH4_7g01040 FvH4_7g01040
malus_domestica	MD02G1311900.v1.1 MD07G1010700.v1.1
prunus_persica	Prupe.2G013000_v2.0.a1 Prupe.2G013000_v2.0.a1 Prupe.2G013000_v2.0.a1 Prupe.2G013100_v2.0.a1
pyrus_communis	pycom02g26180 pycom07g00880
rosa_chinensis	RchiOBHm_Chr1g0315981 RchiOBHm_Chr1g0316021
rosa_laevigata	RLG00000030710 RLG00000030716 RLG00000030718
rosa_multiflora	Rmu_sc0002014.1_g000023 Rmu_sc0002531.1_g000056 Rmu_sc0004566.1_g000010 Rmu_sc0005954.1_g000026
rosa_roxburghii	Rroxscaffold_4G00331210 Rroxscaffold_4G00331270
rosa_rugosa	Rorug01G0007300 Rorug01G0007400 Rorug01G0007500 Rorug01G0007600 Rorug01G0008000 Rorug01G0008100
rosa_samantha	Rh1AG018100 Rh1BG011500 Rh1BG012100 Rh1CG015400 Rh1CG015900 Rh1DG011200 Rh1DG012000
rosa_wichuraiana	Rw1G001120 Rw1G001160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1460
AarI	CACCTGC	1 cut(s)	856
AasI	GACNNNNNNGTC	1 cut(s)	832
Acc36I	ACCTGC	2 cut(s)	856, 1225
AccB1I	GGYRCC	1 cut(s)	458
AccBSI	CCGCTC	1 cut(s)	74
AccI	GTMKAC	1 cut(s)	10
AccII	CGCG	2 cut(s)	888, 1192
AclI	AACGTT	1 cut(s)	1446
AclWI	GGATC	5 cut(s)	86, 887, 950, 963, 1646
AcoI	YGGCCR	2 cut(s)	867, 1173
AcsI	RAATTY	1 cut(s)	301
AcuI	CTGAAG	3 cut(s)	486, 669, 1136
AfaI	GTAC	3 cut(s)	821, 1025, 1041
AfiI	CCNNNNNNNGG	2 cut(s)	368, 876
AflIII	ACRYGT	1 cut(s)	1009
AgsI	TTSAA	7 cut(s)	25, 181, 192, 423, 516, 584, 649
AjnI	CCWGG	1 cut(s)	183
AjuI	GAANNNNNNNTTGG	2 cut(s)	1699, 1731
AluBI	AGCT	9 cut(s)	86, 148, 483, 734, 1001, 1337, 1365, 1421, 1487
AluI	AGCT	9 cut(s)	86, 148, 483, 734, 1001, 1337, 1365, 1421, 1487
Alw21I	GWGCWC	2 cut(s)	485, 847
Alw44I	GTGCAC	1 cut(s)	843
AlwI	GGATC	5 cut(s)	86, 887, 950, 963, 1646
AlwNI	CAGNNNCTG	1 cut(s)	1340
Ama87I	CYCGRG	2 cut(s)	38, 1347
AoxI	GGCC	5 cut(s)	721, 867, 1173, 1329, 1468
ApaLI	GTGCAC	1 cut(s)	843
ApeKI	GCWGC	8 cut(s)	86, 152, 155, 566, 998, 1214, 1334, 1484
ApoI	RAATTY	1 cut(s)	301
Asp700I	GAANNNNTTC	1 cut(s)	388
AspLEI	GCGC	1 cut(s)	1192
AspS9I	GGNCC	3 cut(s)	137, 1199, 1712
AsuC2I	CCSGG	4 cut(s)	789, 809, 1348, 1349
AsuHPI	GGTGA	5 cut(s)	296, 362, 384, 793, 1731
AsuNHI	GCTAGC	1 cut(s)	802
AvaI	CYCGRG	2 cut(s)	38, 1347
AvaII	GGWCC	3 cut(s)	137, 1199, 1712
BaeGI	GKGCMC	1 cut(s)	847
BalI	TGGCCA	1 cut(s)	869
BamHI	GGATCC	1 cut(s)	955
BanI	GGYRCC	1 cut(s)	458
BanII	GRGCYC	1 cut(s)	485
BarI	GAAGNNNNNNTAC	2 cut(s)	211, 243
Bbv12I	GWGCWC	2 cut(s)	485, 847
BbvI	GCAGC	8 cut(s)	73, 164, 167, 553, 1010, 1201, 1346, 1496
BccI	CCATC	7 cut(s)	311, 403, 769, 1024, 1259, 1517, 1690
BcgI	CGANNNNNNTGC	2 cut(s)	1088, 1122
BciT130I	CCWGG	1 cut(s)	185
BciVI	GTATCC	4 cut(s)	25, 892, 926, 1609
BcnI	CCSGG	4 cut(s)	789, 809, 1348, 1349
BfaI	CTAG	9 cut(s)	380, 497, 587, 803, 1140, 1184, 1196, 1295, 1434
BfmI	CTRYAG	2 cut(s)	81, 849
BfuAI	ACCTGC	2 cut(s)	856, 1225
BfuI	GTATCC	4 cut(s)	25, 892, 926, 1609
BglII	AGATCT	1 cut(s)	628
BmcAI	AGTACT	2 cut(s)	821, 1025
Bme1390I	CCNGG	5 cut(s)	185, 789, 809, 1348, 1349
Bme18I	GGWCC	3 cut(s)	137, 1199, 1712
BmeT110I	CYCGRG	2 cut(s)	38, 1347
BmgT120I	GGNCC	3 cut(s)	137, 1199, 1712
BmiI	GGNNCC	4 cut(s)	460, 598, 793, 957
BmrFI	CCNGG	5 cut(s)	185, 789, 809, 1348, 1349
BmsI	GCATC	4 cut(s)	385, 996, 1187, 1550
BmtI	GCTAGC	1 cut(s)	806
BpmI	CTGGAG	1 cut(s)	1443
BpuEI	CTTGAG	1 cut(s)	1712
BpuMI	CCSGG	4 cut(s)	789, 809, 1348, 1349
BsaAI	YACGTR	1 cut(s)	1673
BsaBI	GATNNNNATC	1 cut(s)	656
BsaJI	CCNNGG	9 cut(s)	240, 766, 807, 886, 951, 1170, 1347, 1624, 1715
BsaXI	ACNNNNNCTCC	4 cut(s)	892, 922, 1410, 1440
Bsc4I	CCNNNNNNNGG	2 cut(s)	368, 876
Bse1I	ACTGG	4 cut(s)	95, 140, 1041, 1708
Bse3DI	GCAATG	1 cut(s)	945
Bse8I	GATNNNNATC	1 cut(s)	656
BseBI	CCWGG	1 cut(s)	185
BseDI	CCNNGG	9 cut(s)	240, 766, 807, 886, 951, 1170, 1347, 1624, 1715
BseGI	GGATG	3 cut(s)	414, 1178, 1701
BseJI	GATNNNNATC	1 cut(s)	656
BseLI	CCNNNNNNNGG	2 cut(s)	368, 876
BseMI	GCAATG	1 cut(s)	945
BseMII	CTCAG	3 cut(s)	537, 1034, 1302
BseNI	ACTGG	4 cut(s)	95, 140, 1041, 1708
BseRI	GAGGAG	1 cut(s)	1601
BseSI	GKGCMC	1 cut(s)	847
BseXI	GCAGC	8 cut(s)	73, 164, 167, 553, 1010, 1201, 1346, 1496
BsgI	GTGCAG	1 cut(s)	1017
Bsh1236I	CGCG	2 cut(s)	888, 1192
Bsh1285I	CGRYCG	1 cut(s)	840
BshFI	GGCC	5 cut(s)	723, 869, 1175, 1331, 1470
BshNI	GGYRCC	1 cut(s)	458
BsiEI	CGRYCG	1 cut(s)	840
BsiHKAI	GWGCWC	2 cut(s)	485, 847
BsiHKCI	CYCGRG	2 cut(s)	38, 1347
BsiSI	CCGG	3 cut(s)	788, 809, 1348
BslFI	GGGAC	2 cut(s)	507, 1714
BslI	CCNNNNNNNGG	2 cut(s)	368, 876
BsmFI	GGGAC	2 cut(s)	507, 1714
BsmI	GAATGC	2 cut(s)	62, 119
BsnI	GGCC	5 cut(s)	723, 869, 1175, 1331, 1470
BsoBI	CYCGRG	2 cut(s)	38, 1347
Bsp1286I	GDGCHC	2 cut(s)	485, 847
Bsp143I	GATC	8 cut(s)	91, 628, 837, 879, 955, 1069, 1497, 1638
Bsp19I	CCATGG	1 cut(s)	1624
BspANI	GGCC	5 cut(s)	723, 869, 1175, 1331, 1470
BspCNI	CTCAG	3 cut(s)	538, 1033, 1303
BspFNI	CGCG	2 cut(s)	888, 1192
BspLI	GGNNCC	4 cut(s)	460, 598, 793, 957
BspMAI	CTGCAG	1 cut(s)	853
BspMI	ACCTGC	2 cut(s)	856, 1225
BspOI	GCTAGC	1 cut(s)	806
BspPI	GGATC	5 cut(s)	86, 887, 950, 963, 1646
BspQI	GCTCTTC	1 cut(s)	1395
BspT107I	GGYRCC	1 cut(s)	458
BsrBI	CCGCTC	1 cut(s)	74
BsrDI	GCAATG	1 cut(s)	945
BsrI	ACTGG	4 cut(s)	95, 140, 1041, 1708
BssECI	CCNNGG	9 cut(s)	240, 766, 807, 886, 951, 1170, 1347, 1624, 1715
BssMI	GATC	8 cut(s)	91, 628, 837, 879, 955, 1069, 1497, 1638
BssNAI	GTATAC	1 cut(s)	11
BssT1I	CCWWGG	5 cut(s)	766, 951, 1170, 1624, 1715
Bst1107I	GTATAC	1 cut(s)	11
Bst2UI	CCWGG	1 cut(s)	185
Bst4CI	ACNGT	5 cut(s)	253, 404, 563, 578, 644
Bst6I	CTCTTC	4 cut(s)	408, 1049, 1260, 1395
BstAPI	GCANNNNNTGC	4 cut(s)	68, 1004, 1340, 1559
BstBAI	YACGTR	1 cut(s)	1673
BstC8I	GCNNGC	5 cut(s)	150, 804, 1232, 1386, 1591
BstDEI	CTNAG	4 cut(s)	546, 570, 1020, 1311
BstDSI	CCRYGG	2 cut(s)	886, 1624
BstF5I	GGATG	3 cut(s)	414, 1178, 1701
BstFNI	CGCG	2 cut(s)	888, 1192
BstHHI	GCGC	1 cut(s)	1192
BstKTI	GATC	8 cut(s)	94, 631, 840, 882, 958, 1072, 1500, 1641
BstMBI	GATC	8 cut(s)	91, 628, 837, 879, 955, 1069, 1497, 1638
BstMCI	CGRYCG	1 cut(s)	840
BstNI	CCWGG	1 cut(s)	185
BstNSI	RCATGY	2 cut(s)	1013, 1302
BstSCI	CCNGG	5 cut(s)	183, 787, 807, 1346, 1347
BstSFI	CTRYAG	2 cut(s)	81, 849
BstSLI	GKGCMC	1 cut(s)	847
BstUI	CGCG	2 cut(s)	888, 1192
BstV1I	GCAGC	8 cut(s)	73, 164, 167, 553, 1010, 1201, 1346, 1496
BstX2I	RGATCY	4 cut(s)	628, 879, 955, 1638
BstXI	CCANNNNNNTGG	1 cut(s)	1663
BstYI	RGATCY	4 cut(s)	628, 879, 955, 1638
BstZ17I	GTATAC	1 cut(s)	11
BsuI	GTATCC	4 cut(s)	25, 892, 926, 1609
BsuRI	GGCC	5 cut(s)	723, 869, 1175, 1331, 1470
BtgI	CCRYGG	2 cut(s)	886, 1624
BtsCI	GGATG	3 cut(s)	414, 1178, 1701
BtsIMutI	CAGTG	4 cut(s)	147, 409, 583, 1034
BveI	ACCTGC	2 cut(s)	856, 1225
Cac8I	GCNNGC	5 cut(s)	150, 804, 1232, 1386, 1591
CaiI	CAGNNNCTG	1 cut(s)	1340
CfoI	GCGC	1 cut(s)	1192
Cfr13I	GGNCC	3 cut(s)	137, 1199, 1712
Cfr42I	CCGCGG	1 cut(s)	889
Cfr9I	CCCGGG	1 cut(s)	1347
CseI	GACGC	2 cut(s)	608, 678
Csp6I	GTAC	3 cut(s)	820, 1024, 1040
CviAII	CATG	6 cut(s)	322, 745, 871, 1010, 1299, 1625
CviQI	GTAC	3 cut(s)	820, 1024, 1040
DdeI	CTNAG	4 cut(s)	546, 570, 1020, 1311
DpnI	GATC	8 cut(s)	93, 630, 839, 881, 957, 1071, 1499, 1640
DpnII	GATC	8 cut(s)	91, 628, 837, 879, 955, 1069, 1497, 1638
DrdI	GACNNNNNNGTC	1 cut(s)	832
DseDI	GACNNNNNNGTC	1 cut(s)	832
EaeI	YGGCCR	2 cut(s)	867, 1173
Eam1104I	CTCTTC	4 cut(s)	408, 1049, 1260, 1395
EarI	CTCTTC	4 cut(s)	408, 1049, 1260, 1395
Ecl136II	GAGCTC	1 cut(s)	483
Eco130I	CCWWGG	5 cut(s)	766, 951, 1170, 1624, 1715
Eco147I	AGGCCT	1 cut(s)	723
Eco24I	GRGCYC	1 cut(s)	485
Eco47I	GGWCC	3 cut(s)	137, 1199, 1712
Eco53kI	GAGCTC	1 cut(s)	483
Eco57I	CTGAAG	3 cut(s)	486, 669, 1136
Eco88I	CYCGRG	2 cut(s)	38, 1347
EcoICRI	GAGCTC	1 cut(s)	483
EcoO109I	RGGNCCY	1 cut(s)	1712
EcoRI	GAATTC	1 cut(s)	301
EcoRII	CCWGG	1 cut(s)	183
EcoT14I	CCWWGG	5 cut(s)	766, 951, 1170, 1624, 1715
EcoT38I	GRGCYC	1 cut(s)	485
ErhI	CCWWGG	5 cut(s)	766, 951, 1170, 1624, 1715
FaeI	CATG	6 cut(s)	325, 748, 874, 1013, 1302, 1628
FalI	AAGNNNNNCTT	4 cut(s)	750, 782, 806, 838
FaqI	GGGAC	2 cut(s)	507, 1714
FatI	CATG	6 cut(s)	321, 744, 870, 1009, 1298, 1624
FauI	CCCGC	2 cut(s)	285, 442
FblI	GTMKAC	1 cut(s)	10
FokI	GGATG	3 cut(s)	421, 1165, 1708
FriOI	GRGCYC	1 cut(s)	485
FspBI	CTAG	9 cut(s)	380, 497, 587, 803, 1140, 1184, 1196, 1295, 1434
GlaI	GCGC	1 cut(s)	1191
GsuI	CTGGAG	1 cut(s)	1443
HaeIII	GGCC	5 cut(s)	723, 869, 1175, 1331, 1470
HapII	CCGG	3 cut(s)	788, 809, 1348
HgaI	GACGC	2 cut(s)	608, 678
HhaI	GCGC	1 cut(s)	1192
Hin1II	CATG	6 cut(s)	325, 748, 874, 1013, 1302, 1628
Hin6I	GCGC	1 cut(s)	1190
HinP1I	GCGC	1 cut(s)	1190
HincII	GTYRAC	4 cut(s)	693, 1245, 1444, 1653
HindII	GTYRAC	4 cut(s)	693, 1245, 1444, 1653
HinfI	GANTC	3 cut(s)	272, 512, 1425
HpaI	GTTAAC	2 cut(s)	1444, 1653
HpaII	CCGG	3 cut(s)	788, 809, 1348
HphI	GGTGA	5 cut(s)	296, 362, 384, 793, 1731
Hpy166II	GTNNAC	8 cut(s)	11, 693, 845, 1245, 1444, 1531, 1653, 1739
Hpy188III	TCNNGA	4 cut(s)	40, 661, 1434, 1642
Hpy8I	GTNNAC	8 cut(s)	11, 693, 845, 1245, 1444, 1531, 1653, 1739
HpyAV	CCTTC	1 cut(s)	37
HpyCH4III	ACNGT	5 cut(s)	253, 404, 563, 578, 644
HpyCH4IV	ACGT	3 cut(s)	267, 1446, 1672
HpyF3I	CTNAG	4 cut(s)	546, 570, 1020, 1311
HpySE526I	ACGT	3 cut(s)	267, 1446, 1672
Hsp92II	CATG	6 cut(s)	325, 748, 874, 1013, 1302, 1628
HspAI	GCGC	1 cut(s)	1190
KspAI	GTTAAC	2 cut(s)	1444, 1653
KspI	CCGCGG	1 cut(s)	889
Kzo9I	GATC	8 cut(s)	91, 628, 837, 879, 955, 1069, 1497, 1638
LguI	GCTCTTC	1 cut(s)	1395
LmnI	GCTCC	3 cut(s)	145, 1418, 1538
Lsp1109I	GCAGC	8 cut(s)	73, 164, 167, 553, 1010, 1201, 1346, 1496
LweI	GCATC	4 cut(s)	385, 996, 1187, 1550
MaeI	CTAG	9 cut(s)	380, 497, 587, 803, 1140, 1184, 1196, 1295, 1434
MaeII	ACGT	3 cut(s)	267, 1446, 1672
MaeIII	GTNAC	3 cut(s)	1153, 1165, 1668
MalI	GATC	8 cut(s)	93, 630, 839, 881, 957, 1071, 1499, 1640
MbiI	CCGCTC	1 cut(s)	74
MboI	GATC	8 cut(s)	91, 628, 837, 879, 955, 1069, 1497, 1638
MboII	GAAGA	9 cut(s)	257, 425, 661, 848, 874, 1036, 1129, 1247, 1382
MflI	RGATCY	4 cut(s)	628, 879, 955, 1638
MhlI	GDGCHC	2 cut(s)	485, 847
MlsI	TGGCCA	1 cut(s)	869
MluCI	AATT	5 cut(s)	301, 939, 1065, 1401, 1501
MluNI	TGGCCA	1 cut(s)	869
MlyI	GAGTC	1 cut(s)	1434
MmeI	TCCRAC	2 cut(s)	910, 1378
Mox20I	TGGCCA	1 cut(s)	869
MroXI	GAANNNNTTC	1 cut(s)	388
MscI	TGGCCA	1 cut(s)	869
MseI	TTAA	7 cut(s)	540, 894, 942, 1055, 1089, 1443, 1652
MslI	CAYNNNNRTG	1 cut(s)	1661
Msp20I	TGGCCA	1 cut(s)	869
MspA1I	CMGCKG	2 cut(s)	464, 888
MspI	CCGG	3 cut(s)	788, 809, 1348
MspR9I	CCNGG	5 cut(s)	185, 789, 809, 1348, 1349
Mva1269I	GAATGC	2 cut(s)	62, 119
MvaI	CCWGG	1 cut(s)	185
MvnI	CGCG	2 cut(s)	888, 1192
NciI	CCSGG	4 cut(s)	789, 809, 1348, 1349
NcoI	CCATGG	1 cut(s)	1624
NdeII	GATC	8 cut(s)	91, 628, 837, 879, 955, 1069, 1497, 1638
NheI	GCTAGC	1 cut(s)	802
NlaIII	CATG	6 cut(s)	325, 748, 874, 1013, 1302, 1628
NlaIV	GGNNCC	4 cut(s)	460, 598, 793, 957
NmeAIII	GCCGAG	1 cut(s)	265
NmuCI	GTSAC	2 cut(s)	1153, 1165
NspI	RCATGY	2 cut(s)	1013, 1302
PaqCI	CACCTGC	1 cut(s)	856
PceI	AGGCCT	1 cut(s)	723
PciI	ACATGT	1 cut(s)	1009
PciSI	GCTCTTC	1 cut(s)	1395
PctI	GAATGC	2 cut(s)	62, 119
PdmI	GAANNNNTTC	1 cut(s)	388
PfeI	GAWTC	2 cut(s)	272, 512
Ple19I	CGATCG	1 cut(s)	840
PleI	GAGTC	1 cut(s)	1433
PpsI	GAGTC	1 cut(s)	1433
Ppu21I	YACGTR	1 cut(s)	1673
PpuMI	RGGWCCY	1 cut(s)	1712
PscI	ACATGT	1 cut(s)	1009
PsiI	TTATAA	1 cut(s)	1460
Psp124BI	GAGCTC	1 cut(s)	485
Psp1406I	AACGTT	1 cut(s)	1446
Psp5II	RGGWCCY	1 cut(s)	1712
Psp6I	CCWGG	1 cut(s)	183
PspGI	CCWGG	1 cut(s)	183
PspN4I	GGNNCC	4 cut(s)	460, 598, 793, 957
PspPI	GGNCC	3 cut(s)	137, 1199, 1712
PspPPI	RGGWCCY	1 cut(s)	1712
PstI	CTGCAG	1 cut(s)	853
PstNI	CAGNNNCTG	1 cut(s)	1340
PsuI	RGATCY	4 cut(s)	628, 879, 955, 1638
PvuI	CGATCG	1 cut(s)	840
RsaI	GTAC	3 cut(s)	821, 1025, 1041
RsaNI	GTAC	3 cut(s)	820, 1024, 1040
RseI	CAYNNNNRTG	1 cut(s)	1661
SacI	GAGCTC	1 cut(s)	485
SacII	CCGCGG	1 cut(s)	889
SapI	GCTCTTC	1 cut(s)	1395
SaqAI	TTAA	7 cut(s)	540, 894, 942, 1055, 1089, 1443, 1652
Sau3AI	GATC	8 cut(s)	91, 628, 837, 879, 955, 1069, 1497, 1638
Sau96I	GGNCC	3 cut(s)	137, 1199, 1712
ScaI	AGTACT	2 cut(s)	821, 1025
SchI	GAGTC	1 cut(s)	1434
ScrFI	CCNGG	5 cut(s)	185, 789, 809, 1348, 1349
SduI	GDGCHC	2 cut(s)	485, 847
SfaNI	GCATC	4 cut(s)	385, 996, 1187, 1550
SfcI	CTRYAG	2 cut(s)	81, 849
Sfr303I	CCGCGG	1 cut(s)	889
SgrBI	CCGCGG	1 cut(s)	889
SinI	GGWCC	3 cut(s)	137, 1199, 1712
SmaI	CCCGGG	1 cut(s)	1349
SmiMI	CAYNNNNRTG	1 cut(s)	1661
SmlI	CTYRAG	1 cut(s)	1727
SmoI	CTYRAG	1 cut(s)	1727
Sse9I	AATT	5 cut(s)	301, 939, 1065, 1401, 1501
SseBI	AGGCCT	1 cut(s)	723
SspI	AATATT	1 cut(s)	717
SspMI	CTAG	9 cut(s)	380, 497, 587, 803, 1140, 1184, 1196, 1295, 1434
SstI	GAGCTC	1 cut(s)	485
StuI	AGGCCT	1 cut(s)	723
StyD4I	CCNGG	5 cut(s)	183, 787, 807, 1346, 1347
StyI	CCWWGG	5 cut(s)	766, 951, 1170, 1624, 1715
TaaI	ACNGT	5 cut(s)	253, 404, 563, 578, 644
TaiI	ACGT	3 cut(s)	270, 1449, 1675
TaqI	TCGA	1 cut(s)	836
TasI	AATT	5 cut(s)	301, 939, 1065, 1401, 1501
TatI	WGTACW	2 cut(s)	819, 1023
TauI	GCSGC	7 cut(s)	74, 464, 891, 1178, 1190, 1195, 1334
TfiI	GAWTC	2 cut(s)	272, 512
Tru1I	TTAA	7 cut(s)	540, 894, 942, 1055, 1089, 1443, 1652
Tru9I	TTAA	7 cut(s)	540, 894, 942, 1055, 1089, 1443, 1652
TscAI	CASTG	4 cut(s)	147, 409, 583, 1041
TseFI	GTSAC	2 cut(s)	1153, 1165
TseI	GCWGC	8 cut(s)	86, 152, 155, 566, 998, 1214, 1334, 1484
Tsp45I	GTSAC	2 cut(s)	1153, 1165
TspDTI	ATGAA	4 cut(s)	112, 278, 650, 1036
TspGWI	ACGGA	2 cut(s)	612, 1137
TspMI	CCCGGG	1 cut(s)	1347
TspRI	CASTG	4 cut(s)	147, 409, 583, 1041
VneI	GTGCAC	1 cut(s)	843
VpaK11BI	GGWCC	3 cut(s)	137, 1199, 1712
XapI	RAATTY	1 cut(s)	301
XbaI	TCTAGA	1 cut(s)	1433
XceI	RCATGY	2 cut(s)	1013, 1302
XcmI	CCANNNNNNNNNTGG	2 cut(s)	607, 1631
XmaI	CCCGGG	1 cut(s)	1347
XmiI	GTMKAC	1 cut(s)	10
XmnI	GAANNNNTTC	1 cut(s)	388
XspI	CTAG	9 cut(s)	380, 497, 587, 803, 1140, 1184, 1196, 1295, 1434
ZrmI	AGTACT	2 cut(s)	821, 1025

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.