Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002531.1

Orthogroup ID

OG0002447

Physical Location & Seq

Genomic Coordinates Reverse (-)

272631 .. 277915

Gene Structure 5285 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002531.1_g000056.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

atgcctgttgatgttttcttcagggatgcaaggaatgttttcaaatgggatgtgcttggtaaggagatactgcagattgcagtccctgctgccctggctgttgctgctgatcctctcgcttccttaatcgacacagctttcattggtcatataggtccggtggaactagcggcagcaggagtatctattgccttgttcaatcaagcttcaaggattactatattcccacttgtcagcgtcgccacctcctttgttgccgaggaagatactgtagcaaaaatgcaaataaaagcaggaaaaggcctgaaattggagaagggttcagacatgcttgacgacctggaaaagggggttgctaaaccaaaacctgagacgaaagagcctgcactagatgatgaaaatggtgaatcctcagaaatgggcaagcatctgggaattgatgaagacaaggaaaatggtgagaactcagacaagatactaaatgaaggcagtgaagcaaagaactccatatcggaagatgctaagctggagaatggagagaaaggtgttcctaaaagtagtgaaccacaagaaaatggttccaagacaggtattgtaaacggtccatctgttgttatgagcaaaaataagaagacaaagatgaagaacaaaaagcgtactattgcttccgcatcgacagcactcatcttcggtgcaatacttggcctgctgcaagctatatttctcatgttaggatccaaagctcttcttggtgtgatgggtgtgaaacatgactcccccatgctaaaaccagcaatgaagtacttgacagtaaggtcgatcggtgcacctgctgttcttcttacattggccatgcaaggaatcttccgagggtttaaggatactaaaactcctttatatgtcattgttgtgggatatgcaattaacattgccttggatccacttctcatctttgtatgcggtttcggcatcagaggtgcagctattgcacacgttctttctcagtacttgatggcactggtcctcttcttaatcttaatgagaaaagttaatctcatgccaccaagtgttaaagacttgcagtttggcaagtttcttaagaatggttctctattgttggctagggttgttgctgtgacattctgtgtcaccttagctgcatctttggcagcacggcagggtccaactcccatggctgcattccagacgtgcttacaagtctggttaacatcatcccttcttgctgatgggctagctgttgcaggacaggctattctagcatgtgcatttgctgagaaagactacaaaaaggccacagctaccgcaactcgggtattacagatgggatttatccttggtgtgggactcgctcttgttgttggagttggatggggactggaaccggaccctggcgctttctcaagggtggttcatcaccacagctttcgagagcaccaacctcatcacaaggctcttttcctgccttccgagaaaggacttcttgccttacggataagggctttggttgtgatctcttcgcgtcaccgaatcgatactcaacgttggcgttacccttgcttctctggtagtgtcggtggcggtagcactaacagtcggctcttggagagactaggacttgaagcatggtcgccgggtttcgacgagactgaaggtttgctccggggaggcttgataatctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006820 GO:0006842 GO:0006855 GO:0006873 GO:0006875 GO:0006879 GO:0006950 GO:0006979 GO:0007154 GO:0008150 GO:0008324 GO:0008509 GO:0008514 GO:0009267 GO:0009605 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0015075 GO:0015137 GO:0015142 GO:0015238 GO:0015318 GO:0015711 GO:0015746 GO:0015849 GO:0015893 GO:0016020 GO:0016036 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0031667 GO:0031668 GO:0031669 GO:0032870 GO:0033554 GO:0033993 GO:0034220 GO:0034599 GO:0034614 GO:0035674 GO:0035690 GO:0042221 GO:0042493 GO:0042592 GO:0042594 GO:0042891 GO:0042895 GO:0044464 GO:0046873 GO:0046916 GO:0046942 GO:0046943 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071369 GO:0071495 GO:0071496 GO:0071702 GO:0071731 GO:0071732 GO:0071944 GO:0097305 GO:0097366 GO:0098655 GO:0098656 GO:0098771 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902170 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

566

Amino Acids

60.54

Weight (kDa)

9.17

Isoelectric Point (pI)

32.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002447)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08040 AT3G08040
fragaria_vesca	FvH4_7g01040 FvH4_7g01040 FvH4_7g01040 FvH4_7g01040 FvH4_7g01040
malus_domestica	MD02G1311900.v1.1 MD07G1010700.v1.1
prunus_persica	Prupe.2G013000_v2.0.a1 Prupe.2G013000_v2.0.a1 Prupe.2G013000_v2.0.a1 Prupe.2G013100_v2.0.a1
pyrus_communis	pycom02g26180 pycom07g00880
rosa_chinensis	RchiOBHm_Chr1g0315981 RchiOBHm_Chr1g0316021
rosa_laevigata	RLG00000030710 RLG00000030716 RLG00000030718
rosa_multiflora	Rmu_sc0002014.1_g000023 Rmu_sc0002531.1_g000056 Rmu_sc0004566.1_g000010 Rmu_sc0005954.1_g000026
rosa_roxburghii	Rroxscaffold_4G00331210 Rroxscaffold_4G00331270
rosa_rugosa	Rorug01G0007300 Rorug01G0007400 Rorug01G0007500 Rorug01G0007600 Rorug01G0008000 Rorug01G0008100
rosa_samantha	Rh1AG018100 Rh1BG011500 Rh1BG012100 Rh1CG015400 Rh1CG015900 Rh1DG011200 Rh1DG012000
rosa_wichuraiana	Rw1G001120 Rw1G001160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	838
AasI	GACNNNNNNGTC	1 cut(s)	814
Acc36I	ACCTGC	1 cut(s)	838
AccII	CGCG	1 cut(s)	1540
AciI	CCGC	5 cut(s)	170, 669, 960, 1323, 1599
AclI	AACGTT	1 cut(s)	1561
AclWI	GGATC	5 cut(s)	104, 729, 742, 932, 945
AcoI	YGGCCR	1 cut(s)	849
AcuI	CTGAAG	2 cut(s)	4, 1689
AdeI	CACNNNGTG	1 cut(s)	1067
AfaI	GTAC	3 cut(s)	658, 803, 1007
AfiI	CCNNNNNNNGG	5 cut(s)	310, 346, 1329, 1360, 1409
AflII	CTTAAG	1 cut(s)	1097
AflIII	ACRYGT	1 cut(s)	991
AgsI	TTSAA	4 cut(s)	43, 199, 210, 1640
AjiI	CACGTC	1 cut(s)	1209
AjnI	CCWGG	3 cut(s)	93, 339, 1408
Alw21I	GWGCWC	2 cut(s)	829, 1455
Alw26I	GTCTC	3 cut(s)	365, 1621, 1658
Alw44I	GTGCAC	1 cut(s)	825
AlwI	GGATC	5 cut(s)	104, 729, 742, 932, 945
AlwNI	CAGNNNCTG	1 cut(s)	86
Ama87I	CYCGRG	1 cut(s)	1329
AoxI	GGCC	4 cut(s)	301, 703, 849, 1311
ApaLI	GTGCAC	1 cut(s)	825
ApeKI	GCWGC	8 cut(s)	89, 104, 173, 709, 980, 1157, 1169, 1196
ArsI	GACNNNNNNTTYG	4 cut(s)	1067, 1099, 1657, 1689
Asp700I	GAANNNNTTC	1 cut(s)	38
AspLEI	GCGC	1 cut(s)	1415
AspS9I	GGNCC	5 cut(s)	155, 602, 1021, 1181, 1405
AsuC2I	CCSGG	2 cut(s)	1653, 1682
AsuHPI	GGTGA	5 cut(s)	416, 470, 1141, 1427, 1535
AsuNHI	GCTAGC	1 cut(s)	1252
AvaI	CYCGRG	1 cut(s)	1329
AvaII	GGWCC	5 cut(s)	155, 602, 1021, 1181, 1405
BaeGI	GKGCMC	1 cut(s)	829
BalI	TGGCCA	1 cut(s)	851
BamHI	GGATCC	2 cut(s)	734, 937
BarI	GAAGNNNNNNTAC	2 cut(s)	649, 681
BbsI	GAAGAC	2 cut(s)	450, 638
Bbv12I	GWGCWC	2 cut(s)	829, 1455
BbvI	GCAGC	8 cut(s)	76, 91, 185, 696, 992, 1144, 1181, 1183
BccI	CCATC	6 cut(s)	613, 751, 1006, 1241, 1336, 1383
BceAI	ACGGC	1 cut(s)	1190
BciT130I	CCWGG	3 cut(s)	95, 341, 1410
BciVI	GTATCC	1 cut(s)	874
BcnI	CCSGG	2 cut(s)	1653, 1682
BcoDI	GTCTC	3 cut(s)	365, 1621, 1658
BfaI	CTAG	6 cut(s)	167, 389, 1122, 1253, 1277, 1631
BfmI	CTRYAG	2 cut(s)	71, 270
BfoI	RGCGCY	1 cut(s)	1416
BfrI	CTTAAG	1 cut(s)	1097
BfuAI	ACCTGC	1 cut(s)	838
BfuI	GTATCC	1 cut(s)	874
BisI	GCNGC	9 cut(s)	90, 105, 171, 174, 710, 981, 1158, 1170, 1197
BlpI	GCTNAGC	1 cut(s)	522
BlsI	GCNGC	9 cut(s)	91, 106, 172, 175, 711, 982, 1159, 1171, 1198
BmcAI	AGTACT	2 cut(s)	803, 1007
Bme1390I	CCNGG	5 cut(s)	95, 341, 1410, 1653, 1682
Bme18I	GGWCC	5 cut(s)	155, 602, 1021, 1181, 1405
BmeT110I	CYCGRG	1 cut(s)	1329
BmgBI	CACGTC	1 cut(s)	1209
BmgT120I	GGNCC	5 cut(s)	155, 602, 1021, 1181, 1405
BmiI	GGNNCC	6 cut(s)	580, 736, 939, 1182, 1401, 1407
BmrFI	CCNGG	5 cut(s)	95, 341, 1410, 1653, 1682
BmsI	GCATC	6 cut(s)	16, 436, 508, 680, 978, 1169
BmtI	GCTAGC	1 cut(s)	1256
BpiI	GAAGAC	2 cut(s)	450, 638
BpmI	CTGGAG	1 cut(s)	548
Bpu10I	CCTNAGC	1 cut(s)	1153
Bpu1102I	GCTNAGC	1 cut(s)	522
BpuEI	CTTGAG	1 cut(s)	1405
BpuMI	CCSGG	2 cut(s)	1653, 1682
Bsa29I	ATCGAT	1 cut(s)	1551
BsaJI	CCNNGG	8 cut(s)	93, 258, 868, 933, 1191, 1354, 1408, 1681
BsaWI	WCCGGW	2 cut(s)	157, 1402
BsaXI	ACNNNNNCTCC	2 cut(s)	874, 904
Bsc4I	CCNNNNNNNGG	5 cut(s)	310, 346, 1329, 1360, 1409
Bse1I	ACTGG	2 cut(s)	1023, 1401
Bse3DI	GCAATG	2 cut(s)	801, 927
BseBI	CCWGG	3 cut(s)	95, 341, 1410
BseCI	ATCGAT	1 cut(s)	1551
BseDI	CCNNGG	8 cut(s)	93, 258, 868, 933, 1191, 1354, 1408, 1681
BseGI	GGATG	4 cut(s)	31, 55, 1232, 1394
BseLI	CCNNNNNNNGG	5 cut(s)	310, 346, 1329, 1360, 1409
BseMI	GCAATG	2 cut(s)	801, 927
BseMII	CTCAG	5 cut(s)	360, 426, 480, 1016, 1284
BseNI	ACTGG	2 cut(s)	1023, 1401
BseSI	GKGCMC	1 cut(s)	829
BseXI	GCAGC	8 cut(s)	76, 91, 185, 696, 992, 1144, 1181, 1183
BsgI	GTGCAG	2 cut(s)	369, 999
Bsh1236I	CGCG	1 cut(s)	1540
Bsh1285I	CGRYCG	1 cut(s)	822
BshFI	GGCC	4 cut(s)	303, 705, 851, 1313
BshVI	ATCGAT	1 cut(s)	1551
BsiEI	CGRYCG	1 cut(s)	822
BsiHKAI	GWGCWC	2 cut(s)	829, 1455
BsiHKCI	CYCGRG	1 cut(s)	1329
BsiSI	CCGG	4 cut(s)	158, 1403, 1652, 1681
BslFI	GGGAC	3 cut(s)	68, 1377, 1407
BslI	CCNNNNNNNGG	5 cut(s)	310, 346, 1329, 1360, 1409
BsmAI	GTCTC	3 cut(s)	365, 1621, 1658
BsmBI	CGTCTC	1 cut(s)	365
BsmFI	GGGAC	3 cut(s)	68, 1377, 1407
BsmI	GAATGC	1 cut(s)	1199
BsnI	GGCC	4 cut(s)	303, 705, 851, 1313
BsoBI	CYCGRG	1 cut(s)	1329
Bsp1286I	GDGCHC	2 cut(s)	829, 1455
Bsp143I	GATC	5 cut(s)	109, 734, 819, 937, 1530
Bsp1720I	GCTNAGC	1 cut(s)	522
Bsp19I	CCATGG	1 cut(s)	1191
BspACI	CCGC	5 cut(s)	170, 669, 960, 1323, 1599
BspANI	GGCC	4 cut(s)	303, 705, 851, 1313
BspCNI	CTCAG	5 cut(s)	361, 425, 479, 1015, 1285
BspDI	ATCGAT	1 cut(s)	1551
BspFNI	CGCG	1 cut(s)	1540
BspLI	GGNNCC	6 cut(s)	580, 736, 939, 1182, 1401, 1407
BspMAI	CTGCAG	1 cut(s)	75
BspMI	ACCTGC	1 cut(s)	838
BspOI	GCTAGC	1 cut(s)	1256
BspPI	GGATC	5 cut(s)	104, 729, 742, 932, 945
BspQI	GCTCTTC	1 cut(s)	750
BspTI	CTTAAG	1 cut(s)	1097
BsrDI	GCAATG	2 cut(s)	801, 927
BsrI	ACTGG	2 cut(s)	1023, 1401
BssECI	CCNNGG	8 cut(s)	93, 258, 868, 933, 1191, 1354, 1408, 1681
BssMI	GATC	5 cut(s)	109, 734, 819, 937, 1530
BssT1I	CCWWGG	3 cut(s)	933, 1191, 1354
Bst2UI	CCWGG	3 cut(s)	95, 341, 1410
Bst4CI	ACNGT	4 cut(s)	271, 602, 811, 1613
Bst6I	CTCTTC	3 cut(s)	750, 1031, 1540
BstAFI	CTTAAG	1 cut(s)	1097
BstAPI	GCANNNNNTGC	2 cut(s)	86, 986
BstC8I	GCNNGC	5 cut(s)	384, 425, 707, 714, 1254
BstDEI	CTNAG	7 cut(s)	369, 412, 466, 522, 1002, 1153, 1293
BstDSI	CCRYGG	1 cut(s)	1191
BstENI	CCTNNNNNAGG	1 cut(s)	344
BstF5I	GGATG	4 cut(s)	31, 55, 1232, 1394
BstFNI	CGCG	1 cut(s)	1540
BstH2I	RGCGCY	1 cut(s)	1416
BstHHI	GCGC	1 cut(s)	1415
BstKTI	GATC	5 cut(s)	112, 737, 822, 940, 1533
BstMAI	GTCTC	3 cut(s)	365, 1621, 1658
BstMBI	GATC	5 cut(s)	109, 734, 819, 937, 1530
BstMCI	CGRYCG	1 cut(s)	822
BstMWI	GCNNNNNNNGC	9 cut(s)	86, 95, 104, 677, 966, 986, 1166, 1268, 1277
BstNI	CCWGG	3 cut(s)	95, 341, 1410
BstNSI	RCATGY	2 cut(s)	331, 1284
BstSCI	CCNGG	5 cut(s)	93, 339, 1408, 1651, 1680
BstSFI	CTRYAG	2 cut(s)	71, 270
BstSLI	GKGCMC	1 cut(s)	829
BstUI	CGCG	1 cut(s)	1540
BstV1I	GCAGC	8 cut(s)	76, 91, 185, 696, 992, 1144, 1181, 1183
BstV2I	GAAGAC	2 cut(s)	450, 638
BstX2I	RGATCY	2 cut(s)	734, 937
BstYI	RGATCY	2 cut(s)	734, 937
Bsu15I	ATCGAT	1 cut(s)	1551
BsuI	GTATCC	1 cut(s)	874
BsuRI	GGCC	4 cut(s)	303, 705, 851, 1313
BsuTUI	ATCGAT	1 cut(s)	1551
BtgI	CCRYGG	1 cut(s)	1191
BtrI	CACGTC	1 cut(s)	1209
BtsCI	GGATG	4 cut(s)	31, 55, 1232, 1394
BtsI	GCAGTG	1 cut(s)	496
BtsIMutI	CAGTG	2 cut(s)	496, 1016
BveI	ACCTGC	1 cut(s)	838
Cac8I	GCNNGC	5 cut(s)	384, 425, 707, 714, 1254
CaiI	CAGNNNCTG	1 cut(s)	86
CfoI	GCGC	1 cut(s)	1415
Cfr13I	GGNCC	5 cut(s)	155, 602, 1021, 1181, 1405
ClaI	ATCGAT	1 cut(s)	1551
CseI	GACGC	2 cut(s)	226, 1529
Csp6I	GTAC	3 cut(s)	657, 802, 1006
CspCI	CAANNNNNGTGG	2 cut(s)	232, 267
CviAII	CATG	9 cut(s)	328, 727, 770, 781, 853, 1057, 1192, 1281, 1644
CviQI	GTAC	3 cut(s)	657, 802, 1006
DdeI	CTNAG	7 cut(s)	369, 412, 466, 522, 1002, 1153, 1293
DpnI	GATC	5 cut(s)	111, 736, 821, 939, 1532
DpnII	GATC	5 cut(s)	109, 734, 819, 937, 1530
DraIII	CACNNNGTG	1 cut(s)	1067
DrdI	GACNNNNNNGTC	1 cut(s)	814
DseDI	GACNNNNNNGTC	1 cut(s)	814
EaeI	YGGCCR	1 cut(s)	849
Eam1104I	CTCTTC	3 cut(s)	750, 1031, 1540
EarI	CTCTTC	3 cut(s)	750, 1031, 1540
Eco130I	CCWWGG	3 cut(s)	933, 1191, 1354
Eco147I	AGGCCT	1 cut(s)	303
Eco47I	GGWCC	5 cut(s)	155, 602, 1021, 1181, 1405
Eco57I	CTGAAG	2 cut(s)	4, 1689
Eco88I	CYCGRG	1 cut(s)	1329
EcoNI	CCTNNNNNAGG	1 cut(s)	344
EcoRII	CCWGG	3 cut(s)	93, 339, 1408
EcoT14I	CCWWGG	3 cut(s)	933, 1191, 1354
ErhI	CCWWGG	3 cut(s)	933, 1191, 1354
Esp3I	CGTCTC	1 cut(s)	365
FaeI	CATG	9 cut(s)	331, 730, 773, 784, 856, 1060, 1195, 1284, 1647
FalI	AAGNNNNNCTT	4 cut(s)	732, 764, 1485, 1517
FaqI	GGGAC	3 cut(s)	68, 1377, 1407
FatI	CATG	9 cut(s)	327, 726, 769, 780, 852, 1056, 1191, 1280, 1643
Fnu4HI	GCNGC	9 cut(s)	90, 105, 171, 174, 710, 981, 1158, 1170, 1197
FokI	GGATG	4 cut(s)	38, 62, 1219, 1401
Fsp4HI	GCNGC	9 cut(s)	90, 105, 171, 174, 710, 981, 1158, 1170, 1197
FspBI	CTAG	6 cut(s)	167, 389, 1122, 1253, 1277, 1631
GlaI	GCGC	1 cut(s)	1414
GluI	GCNGC	9 cut(s)	90, 105, 171, 174, 710, 981, 1158, 1170, 1197
GsuI	CTGGAG	1 cut(s)	548
HaeII	RGCGCY	1 cut(s)	1416
HaeIII	GGCC	4 cut(s)	303, 705, 851, 1313
HapII	CCGG	4 cut(s)	158, 1403, 1652, 1681
HgaI	GACGC	2 cut(s)	226, 1529
HhaI	GCGC	1 cut(s)	1415
Hin1II	CATG	9 cut(s)	331, 730, 773, 784, 856, 1060, 1195, 1284, 1647
Hin6I	GCGC	1 cut(s)	1413
HinP1I	GCGC	1 cut(s)	1413
HincII	GTYRAC	1 cut(s)	1227
HindII	GTYRAC	1 cut(s)	1227
HindIII	AAGCTT	1 cut(s)	204
HinfI	GANTC	5 cut(s)	407, 773, 861, 1365, 1548
HpaI	GTTAAC	1 cut(s)	1227
HpaII	CCGG	4 cut(s)	158, 1403, 1652, 1681
HphI	GGTGA	5 cut(s)	416, 470, 1141, 1427, 1535
Hpy166II	GTNNAC	4 cut(s)	563, 598, 827, 1227
Hpy188I	TCNGA	8 cut(s)	325, 415, 469, 514, 869, 974, 1489, 1700
Hpy188III	TCNNGA	2 cut(s)	1204, 1448
Hpy8I	GTNNAC	4 cut(s)	563, 598, 827, 1227
Hpy99I	CGWCG	2 cut(s)	242, 1664
HpyAV	CCTTC	5 cut(s)	310, 479, 1247, 1494, 1664
HpyCH4III	ACNGT	4 cut(s)	271, 602, 811, 1613
HpyCH4IV	ACGT	3 cut(s)	993, 1208, 1561
HpyF10VI	GCNNNNNNNGC	9 cut(s)	86, 95, 104, 677, 966, 986, 1166, 1268, 1277
HpyF3I	CTNAG	7 cut(s)	369, 412, 466, 522, 1002, 1153, 1293
HpySE526I	ACGT	3 cut(s)	993, 1208, 1561
Hsp92II	CATG	9 cut(s)	331, 730, 773, 784, 856, 1060, 1195, 1284, 1647
HspAI	GCGC	1 cut(s)	1413
KspAI	GTTAAC	1 cut(s)	1227
Kzo9I	GATC	5 cut(s)	109, 734, 819, 937, 1530
LguI	GCTCTTC	1 cut(s)	750
LmnI	GCTCC	1 cut(s)	1683
Lsp1109I	GCAGC	8 cut(s)	76, 91, 185, 696, 992, 1144, 1181, 1183
LweI	GCATC	6 cut(s)	16, 436, 508, 680, 978, 1169
MaeI	CTAG	6 cut(s)	167, 389, 1122, 1253, 1277, 1631
MaeII	ACGT	3 cut(s)	993, 1208, 1561
MaeIII	GTNAC	4 cut(s)	1135, 1147, 1541, 1568
MalI	GATC	5 cut(s)	111, 736, 821, 939, 1532
MboI	GATC	5 cut(s)	109, 734, 819, 937, 1530
MflI	RGATCY	2 cut(s)	734, 937
MhlI	GDGCHC	2 cut(s)	829, 1455
MlsI	TGGCCA	1 cut(s)	851
MluCI	AATT	3 cut(s)	308, 435, 921
MluNI	TGGCCA	1 cut(s)	851
MlyI	GAGTC	2 cut(s)	767, 1359
MmeI	TCCRAC	3 cut(s)	1208, 1360, 1366
MnlI	CCTC	9 cut(s)	123, 253, 256, 421, 863, 968, 1034, 1470, 1679
Mox20I	TGGCCA	1 cut(s)	851
MroXI	GAANNNNTTC	1 cut(s)	38
MscI	TGGCCA	1 cut(s)	851
MseI	TTAA	9 cut(s)	125, 876, 924, 1031, 1037, 1050, 1071, 1098, 1226
MslI	CAYNNNNRTG	1 cut(s)	908
Msp20I	TGGCCA	1 cut(s)	851
MspCI	CTTAAG	1 cut(s)	1097
MspI	CCGG	4 cut(s)	158, 1403, 1652, 1681
MspR9I	CCNGG	5 cut(s)	95, 341, 1410, 1653, 1682
Mva1269I	GAATGC	1 cut(s)	1199
MvaI	CCWGG	3 cut(s)	95, 341, 1410
MvnI	CGCG	1 cut(s)	1540
MwoI	GCNNNNNNNGC	9 cut(s)	86, 95, 104, 677, 966, 986, 1166, 1268, 1277
NciI	CCSGG	2 cut(s)	1653, 1682
NcoI	CCATGG	1 cut(s)	1191
NdeII	GATC	5 cut(s)	109, 734, 819, 937, 1530
NheI	GCTAGC	1 cut(s)	1252
NlaIII	CATG	9 cut(s)	331, 730, 773, 784, 856, 1060, 1195, 1284, 1647
NlaIV	GGNNCC	6 cut(s)	580, 736, 939, 1182, 1401, 1407
NmeAIII	GCCGAG	1 cut(s)	283
NmuCI	GTSAC	3 cut(s)	1135, 1147, 1541
NspI	RCATGY	2 cut(s)	331, 1284
PaqCI	CACCTGC	1 cut(s)	838
PceI	AGGCCT	1 cut(s)	303
PciSI	GCTCTTC	1 cut(s)	750
PctI	GAATGC	1 cut(s)	1199
PdmI	GAANNNNTTC	1 cut(s)	38
PfeI	GAWTC	3 cut(s)	407, 861, 1548
PkrI	GCNGC	9 cut(s)	91, 106, 172, 175, 711, 982, 1159, 1171, 1198
Ple19I	CGATCG	1 cut(s)	822
PleI	GAGTC	2 cut(s)	767, 1359
PpsI	GAGTC	2 cut(s)	767, 1359
Psp1406I	AACGTT	1 cut(s)	1561
Psp6I	CCWGG	3 cut(s)	93, 339, 1408
PspGI	CCWGG	3 cut(s)	93, 339, 1408
PspN4I	GGNNCC	6 cut(s)	580, 736, 939, 1182, 1401, 1407
PspPI	GGNCC	5 cut(s)	155, 602, 1021, 1181, 1405
PstI	CTGCAG	1 cut(s)	75
PstNI	CAGNNNCTG	1 cut(s)	86
PsuI	RGATCY	2 cut(s)	734, 937
PvuI	CGATCG	1 cut(s)	822
RsaI	GTAC	3 cut(s)	658, 803, 1007
RsaNI	GTAC	3 cut(s)	657, 802, 1006
RseI	CAYNNNNRTG	1 cut(s)	908
SapI	GCTCTTC	1 cut(s)	750
SaqAI	TTAA	9 cut(s)	125, 876, 924, 1031, 1037, 1050, 1071, 1098, 1226
SatI	GCNGC	9 cut(s)	90, 105, 171, 174, 710, 981, 1158, 1170, 1197
Sau3AI	GATC	5 cut(s)	109, 734, 819, 937, 1530
Sau96I	GGNCC	5 cut(s)	155, 602, 1021, 1181, 1405
ScaI	AGTACT	2 cut(s)	803, 1007
SchI	GAGTC	2 cut(s)	767, 1359
ScrFI	CCNGG	5 cut(s)	95, 341, 1410, 1653, 1682
SduI	GDGCHC	2 cut(s)	829, 1455
SfaNI	GCATC	6 cut(s)	16, 436, 508, 680, 978, 1169
SfcI	CTRYAG	2 cut(s)	71, 270
SinI	GGWCC	5 cut(s)	155, 602, 1021, 1181, 1405
SmiMI	CAYNNNNRTG	1 cut(s)	908
SmlI	CTYRAG	2 cut(s)	1097, 1420
SmoI	CTYRAG	2 cut(s)	1097, 1420
Sse9I	AATT	3 cut(s)	308, 435, 921
SseBI	AGGCCT	1 cut(s)	303
SsiI	CCGC	5 cut(s)	170, 669, 960, 1323, 1599
SspMI	CTAG	6 cut(s)	167, 389, 1122, 1253, 1277, 1631
StuI	AGGCCT	1 cut(s)	303
StyD4I	CCNGG	5 cut(s)	93, 339, 1408, 1651, 1680
StyI	CCWWGG	3 cut(s)	933, 1191, 1354
TaaI	ACNGT	4 cut(s)	271, 602, 811, 1613
TaiI	ACGT	3 cut(s)	996, 1211, 1564
TaqI	TCGA	6 cut(s)	129, 674, 818, 1447, 1551, 1659
TasI	AATT	3 cut(s)	308, 435, 921
TatI	WGTACW	2 cut(s)	801, 1005
TauI	GCSGC	1 cut(s)	173
TfiI	GAWTC	3 cut(s)	407, 861, 1548
Tru1I	TTAA	9 cut(s)	125, 876, 924, 1031, 1037, 1050, 1071, 1098, 1226
Tru9I	TTAA	9 cut(s)	125, 876, 924, 1031, 1037, 1050, 1071, 1098, 1226
TscAI	CASTG	2 cut(s)	496, 1023
TseFI	GTSAC	3 cut(s)	1135, 1147, 1541
TseI	GCWGC	8 cut(s)	89, 104, 173, 709, 980, 1157, 1169, 1196
Tsp45I	GTSAC	3 cut(s)	1135, 1147, 1541
TspDTI	ATGAA	7 cut(s)	130, 411, 456, 498, 656, 812, 1421
TspGWI	ACGGA	1 cut(s)	1525
TspRI	CASTG	2 cut(s)	496, 1023
Vha464I	CTTAAG	1 cut(s)	1097
VneI	GTGCAC	1 cut(s)	825
VpaK11BI	GGWCC	5 cut(s)	155, 602, 1021, 1181, 1405
XagI	CCTNNNNNAGG	1 cut(s)	344
XceI	RCATGY	2 cut(s)	331, 1284
XmnI	GAANNNNTTC	1 cut(s)	38
XspI	CTAG	6 cut(s)	167, 389, 1122, 1253, 1277, 1631
ZrmI	AGTACT	2 cut(s)	803, 1007

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.