Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0002447

Physical Location & Seq

Genomic Coordinates Reverse (-)

66388747 .. 66397028

Gene Structure 8282 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000030718

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGCTGGCATTCGAGGATTGGCATTTAGAGTGGAGAAGAGAACCTTTGTTTATTGGCCAGGTGGAGGGAAGAGTTTCTATAAAAGGGAAGGTATCCGGGGCTTTGTACGGGTGTGTTTGTGTAAGCAAAAGGCCAAGCCAGGAAGTTGGTGAAACCATCGAGCTTTGCAATTTTGCTTTCACTGAACAGAGCATCGTGTATAAGGGAAAATATTTAAGCAACTATTATTCAAACATAAGCATGGGAGAGGAGCAAGATTTGCAAAGACCAGTGAGCTTTTGGAAGATGCCTGTTGGTGTTTTCTTCAGGGATGCAAGGAGTGTTTTCAAATGGGATGTGCTTGGTAAGGAGATACTTCAGATTGCAGTCCCTGCTGCTCTGGCTGTAGCTGCTGATCCTGTCGCTTCCTTAATCGACACAGCATTCATCGGTCATATAGGTCCAGTGGAACTTGCAGCAGCAGGAGTATCTATTGCCTTGTTCAATCAAGCTTCAAGGATTACTATATTCCCACTTGTTAGTATCACCACCTCCTTTGTCGCGGAGGAAGATACTGTAGCAAAAATGAAAATAAAATCAGGAAAAAGCCAGAAATTGGAAAATGGTTCAGGCATGCTTGATGACATGGAAAAAGGGGTTGCTAAAACAAAACCTGAGACGAAAGAGCCTTCCCTAGATGACGACAATGGTGAAGCCGCAGAAATGGGTAAGCATCAGGGAAATGATGAAGACAAGGAAAATGGTGAGAACTCAGATAAGGGACTAGATGAAGGCAGTGCAGTAAAGAATTCCATACCGGAAAATACTGAGGTGGAAAATAGAGAAAAAGGTGTTCCTAAAAAAAGTGATCCAGAAGAAAATGGTTCCAAGACAGGTAATGTAAATGGTCCATCTGTTGTTACGAGCAAAAATAAGAAGGCAAAGATGAAGAACAAAAAGCGTACTATTGCTTCCGCATCGACAGCACTCATCTTCGGTGCAATACTTGGCCTGCTGCAAGCTATATTTCTCATGTTAGGATCCAAAGTTCTTCTTGGTGTGATGGGTGTGAAACATGACTCCCCTATGCTAAAACCAGCAATGAAGTACTTGACAGTAAGGTCGATCGGTGCTCCTGCTGTTCTTCTTACATTGGCCATGCAAGGAATCTTCCGAGGGTTTAAGGATACTAAAACTCCTTTATATGTCATTGTTGCGGGATATGCAATTAACATTGCCTTGGATCCACTTCTCATCTTCGTATGCGGTTTTGGCATCAGAGGTGCAGCTATTGCACACGTTCTTTCTCAGTACTTGATGGCAGTGGTCCTCTTCTTAATCTTAATGAGAAAAGTTAATCTCATGCCACCAAGTATTAAAGACTTGCAGTTCGGAAAGTTTCTTAAGAATGGTTCTCTTTTGTTGGCTAGGGTGGTTGCTGTGACATTCTGTGTCACATTAGCTGCATCTTTGGCAGCACGGCTGGGTCCAACTCCCATGGCTGCATTCCAGACATGCTTACAAGTCTGGTTGACGTCATCCCTTCTTGCTGATGGGCTAGCTGTTGCAGGACAGGCTATTCTAGCATGTGCATTTGCAGAGAAAGACTACAAAAAGGCCACAGCTACCGCAACTCGGGTATTACAGATGGGATTTATCCTTGGTGTGGGACTCGCTCTTGTTGTTGGAATTGGTTTGTACTTTGGAGCTGGAATCTTCTCAAGAGATGTCAATGTTTTGCACCTTATAAAAATTGGCCTCCCTTTTGTTGCAGCAACACAACCAATCAATTCCCTCTCTTTTGTGTTTGATGGTGTCAACTTTGGAGCATCTGACTTTGCATACTCTGCATATTCCTTGGTTCTGGTGGCGATAGCAAGCATTGTTTCATTGTTCCTTCTCTCTAAATCCGATGGTTTTGTTGGAATTTGGATTGCTTTGACCATCTATATGGGGTTGCGTGCATTCGCTGGCGTATGGAGGATGGGGACTGGAACCGGACCTTGGCGCTTTCTCAAGGGTCGTTCATCACCACAGGCTTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006820 GO:0006842 GO:0006855 GO:0006873 GO:0006875 GO:0006879 GO:0006950 GO:0006979 GO:0007154 GO:0008150 GO:0008324 GO:0008509 GO:0008514 GO:0009267 GO:0009605 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0015075 GO:0015137 GO:0015142 GO:0015238 GO:0015318 GO:0015711 GO:0015746 GO:0015849 GO:0015893 GO:0016020 GO:0016036 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0031667 GO:0031668 GO:0031669 GO:0032870 GO:0033554 GO:0033993 GO:0034220 GO:0034599 GO:0034614 GO:0035674 GO:0035690 GO:0042221 GO:0042493 GO:0042592 GO:0042594 GO:0042891 GO:0042895 GO:0044464 GO:0046873 GO:0046916 GO:0046942 GO:0046943 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071369 GO:0071495 GO:0071496 GO:0071702 GO:0071731 GO:0071732 GO:0071944 GO:0097305 GO:0097366 GO:0098655 GO:0098656 GO:0098771 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902170 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

675

Amino Acids

72.36

Weight (kDa)

9.11

Isoelectric Point (pI)

30.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	310 - 410	2.4e-13	MatE
MatE	PF01554	472 - 622	2.2e-11	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002447)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08040 AT3G08040
fragaria_vesca	FvH4_7g01040 FvH4_7g01040 FvH4_7g01040 FvH4_7g01040 FvH4_7g01040
malus_domestica	MD02G1311900.v1.1 MD07G1010700.v1.1
prunus_persica	Prupe.2G013000_v2.0.a1 Prupe.2G013000_v2.0.a1 Prupe.2G013000_v2.0.a1 Prupe.2G013100_v2.0.a1
pyrus_communis	pycom02g26180 pycom07g00880
rosa_chinensis	RchiOBHm_Chr1g0315981 RchiOBHm_Chr1g0316021
rosa_laevigata	RLG00000030710 RLG00000030716 RLG00000030718
rosa_multiflora	Rmu_sc0002014.1_g000023 Rmu_sc0002531.1_g000056 Rmu_sc0004566.1_g000010 Rmu_sc0005954.1_g000026
rosa_roxburghii	Rroxscaffold_4G00331210 Rroxscaffold_4G00331270
rosa_rugosa	Rorug01G0007300 Rorug01G0007400 Rorug01G0007500 Rorug01G0007600 Rorug01G0008000 Rorug01G0008100
rosa_samantha	Rh1AG018100 Rh1BG011500 Rh1BG012100 Rh1CG015400 Rh1CG015900 Rh1DG011200 Rh1DG012000
rosa_wichuraiana	Rw1G001120 Rw1G001160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1727
AasI	GACNNNNNNGTC	1 cut(s)	1099
AatII	GACGTC	1 cut(s)	1517
AccB7I	CCANNNNNTGG	1 cut(s)	595
AccII	CGCG	1 cut(s)	542
AciI	CCGC	6 cut(s)	542, 696, 954, 1196, 1245, 1608
AclWI	GGATC	6 cut(s)	389, 842, 1014, 1027, 1217, 1230
AcoI	YGGCCR	2 cut(s)	55, 1134
AcsI	RAATTY	2 cut(s)	787, 1905
AcuI	CTGAAG	2 cut(s)	289, 341
AcyI	GRCGYC	1 cut(s)	1514
AfaI	GTAC	5 cut(s)	107, 943, 1088, 1292, 1679
AfiI	CCNNNNNNNGG	5 cut(s)	64, 595, 1614, 1645, 1983
AflII	CTTAAG	1 cut(s)	1382
AflIII	ACRYGT	1 cut(s)	1276
AgsI	TTSAA	4 cut(s)	231, 328, 484, 495
AjnI	CCWGG	2 cut(s)	57, 138
AjuI	GAANNNNNNNTTGG	2 cut(s)	1966, 1998
AloI	GAACNNNNNNTCC	2 cut(s)	1011, 1043
Alw21I	GWGCWC	1 cut(s)	1114
Alw26I	GTCTC	1 cut(s)	650
AlwI	GGATC	6 cut(s)	389, 842, 1014, 1027, 1217, 1230
AlwNI	CAGNNNCTG	1 cut(s)	371
Ama87I	CYCGRG	1 cut(s)	1614
AoxI	GGCC	6 cut(s)	55, 131, 988, 1134, 1596, 1735
ApoI	RAATTY	2 cut(s)	787, 1905
ArsI	GACNNNNNNTTYG	2 cut(s)	1352, 1384
Asp700I	GAANNNNTTC	1 cut(s)	73
AspLEI	GCGC	1 cut(s)	1989
AspS9I	GGNCC	5 cut(s)	440, 887, 1306, 1466, 1979
AsuC2I	CCSGG	1 cut(s)	97
AsuHPI	GGTGA	5 cut(s)	161, 517, 701, 755, 2001
AsuNHI	GCTAGC	1 cut(s)	1537
AvaI	CYCGRG	1 cut(s)	1614
AvaII	GGWCC	5 cut(s)	440, 887, 1306, 1466, 1979
BalI	TGGCCA	2 cut(s)	57, 1136
BamHI	GGATCC	2 cut(s)	1019, 1222
BarI	GAAGNNNNNNTAC	2 cut(s)	934, 966
BbsI	GAAGAC	1 cut(s)	735
Bbv12I	GWGCWC	1 cut(s)	1114
BceAI	ACGGC	1 cut(s)	1475
BciT130I	CCWGG	2 cut(s)	59, 140
BciVI	GTATCC	2 cut(s)	103, 1159
BcnI	CCSGG	1 cut(s)	97
BcoDI	GTCTC	1 cut(s)	650
BfaI	CTAG	5 cut(s)	674, 764, 1407, 1538, 1562
BfmI	CTRYAG	2 cut(s)	384, 555
BfoI	RGCGCY	1 cut(s)	1990
BfrI	CTTAAG	1 cut(s)	1382
BfuI	GTATCC	2 cut(s)	103, 1159
BmcAI	AGTACT	2 cut(s)	1088, 1292
Bme1390I	CCNGG	3 cut(s)	59, 97, 140
Bme18I	GGWCC	5 cut(s)	440, 887, 1306, 1466, 1979
BmeT110I	CYCGRG	1 cut(s)	1614
BmgT120I	GGNCC	5 cut(s)	440, 887, 1306, 1466, 1979
BmiI	GGNNCC	5 cut(s)	865, 1021, 1224, 1467, 1975
BmrFI	CCNGG	3 cut(s)	59, 97, 140
BmsI	GCATC	8 cut(s)	201, 276, 301, 721, 965, 1263, 1454, 1817
BmtI	GCTAGC	1 cut(s)	1541
BpiI	GAAGAC	1 cut(s)	735
BpuEI	CTTGAG	2 cut(s)	1684, 1979
BpuMI	CCSGG	1 cut(s)	97
BsaHI	GRCGYC	1 cut(s)	1514
BsaJI	CCNNGG	7 cut(s)	96, 1153, 1218, 1476, 1639, 1836, 1982
BsaWI	WCCGGW	2 cut(s)	796, 1976
BsaXI	ACNNNNNCTCC	2 cut(s)	1159, 1189
Bsc4I	CCNNNNNNNGG	5 cut(s)	64, 595, 1614, 1645, 1983
Bse1I	ACTGG	3 cut(s)	269, 443, 1975
Bse3DI	GCAATG	2 cut(s)	1086, 1212
BseBI	CCWGG	2 cut(s)	59, 140
BseDI	CCNNGG	7 cut(s)	96, 1153, 1218, 1476, 1639, 1836, 1982
BseGI	GGATG	4 cut(s)	316, 340, 1517, 1968
BseLI	CCNNNNNNNGG	5 cut(s)	64, 595, 1614, 1645, 1983
BseMI	GCAATG	2 cut(s)	1086, 1212
BseMII	CTCAG	4 cut(s)	645, 765, 798, 1301
BseNI	ACTGG	3 cut(s)	269, 443, 1975
BseRI	GAGGAG	1 cut(s)	263
BseYI	CCCAGC	1 cut(s)	1462
BsgI	GTGCAG	2 cut(s)	798, 1284
Bsh1236I	CGCG	1 cut(s)	542
Bsh1285I	CGRYCG	1 cut(s)	1107
BshFI	GGCC	6 cut(s)	57, 133, 990, 1136, 1598, 1737
BsiEI	CGRYCG	1 cut(s)	1107
BsiHKAI	GWGCWC	1 cut(s)	1114
BsiHKCI	CYCGRG	1 cut(s)	1614
BsiSI	CCGG	3 cut(s)	96, 797, 1977
BslFI	GGGAC	4 cut(s)	353, 774, 1662, 1981
BslI	CCNNNNNNNGG	5 cut(s)	64, 595, 1614, 1645, 1983
BsmAI	GTCTC	1 cut(s)	650
BsmBI	CGTCTC	1 cut(s)	650
BsmFI	GGGAC	4 cut(s)	353, 774, 1662, 1981
BsmI	GAATGC	4 cut(s)	8, 422, 1484, 1943
BsnI	GGCC	6 cut(s)	57, 133, 990, 1136, 1598, 1737
BsoBI	CYCGRG	1 cut(s)	1614
Bsp1286I	GDGCHC	1 cut(s)	1114
Bsp143I	GATC	5 cut(s)	394, 847, 1019, 1104, 1222
Bsp19I	CCATGG	1 cut(s)	1476
BspACI	CCGC	6 cut(s)	542, 696, 954, 1196, 1245, 1608
BspANI	GGCC	6 cut(s)	57, 133, 990, 1136, 1598, 1737
BspCNI	CTCAG	4 cut(s)	646, 764, 799, 1300
BspFNI	CGCG	1 cut(s)	542
BspLI	GGNNCC	5 cut(s)	865, 1021, 1224, 1467, 1975
BspOI	GCTAGC	1 cut(s)	1541
BspPI	GGATC	6 cut(s)	389, 842, 1014, 1027, 1217, 1230
BspTI	CTTAAG	1 cut(s)	1382
BsrDI	GCAATG	2 cut(s)	1086, 1212
BsrI	ACTGG	3 cut(s)	269, 443, 1975
BssECI	CCNNGG	7 cut(s)	96, 1153, 1218, 1476, 1639, 1836, 1982
BssMI	GATC	5 cut(s)	394, 847, 1019, 1104, 1222
BssNI	GRCGYC	1 cut(s)	1514
BssT1I	CCWWGG	5 cut(s)	1218, 1476, 1639, 1836, 1982
Bst2UI	CCWGG	2 cut(s)	59, 140
Bst4CI	ACNGT	2 cut(s)	556, 1096
Bst6I	CTCTTC	3 cut(s)	31, 64, 1316
BstACI	GRCGYC	1 cut(s)	1514
BstAFI	CTTAAG	1 cut(s)	1382
BstAPI	GCANNNNNTGC	4 cut(s)	259, 371, 1271, 1826
BstC8I	GCNNGC	8 cut(s)	6, 614, 992, 999, 1539, 1858, 1941, 1951
BstDEI	CTNAG	4 cut(s)	654, 751, 807, 1287
BstDSI	CCRYGG	1 cut(s)	1476
BstF5I	GGATG	4 cut(s)	316, 340, 1517, 1968
BstFNI	CGCG	1 cut(s)	542
BstH2I	RGCGCY	1 cut(s)	1990
BstHHI	GCGC	1 cut(s)	1989
BstKTI	GATC	5 cut(s)	397, 850, 1022, 1107, 1225
BstMAI	GTCTC	1 cut(s)	650
BstMBI	GATC	5 cut(s)	394, 847, 1019, 1104, 1222
BstMCI	CGRYCG	1 cut(s)	1107
BstNI	CCWGG	2 cut(s)	59, 140
BstNSI	RCATGY	3 cut(s)	616, 1497, 1569
BstSCI	CCNGG	3 cut(s)	57, 95, 138
BstSFI	CTRYAG	2 cut(s)	384, 555
BstUI	CGCG	1 cut(s)	542
BstV2I	GAAGAC	1 cut(s)	735
BstX2I	RGATCY	2 cut(s)	1019, 1222
BstXI	CCANNNNNNTGG	2 cut(s)	146, 1930
BstYI	RGATCY	2 cut(s)	1019, 1222
BsuI	GTATCC	2 cut(s)	103, 1159
BsuRI	GGCC	6 cut(s)	57, 133, 990, 1136, 1598, 1737
BtgI	CCRYGG	1 cut(s)	1476
BtsCI	GGATG	4 cut(s)	316, 340, 1517, 1968
BtsI	GCAGTG	2 cut(s)	781, 1308
BtsIMutI	CAGTG	5 cut(s)	180, 276, 450, 781, 1308
Cac8I	GCNNGC	8 cut(s)	6, 614, 992, 999, 1539, 1858, 1941, 1951
CaiI	CAGNNNCTG	1 cut(s)	371
CfoI	GCGC	1 cut(s)	1989
Cfr13I	GGNCC	5 cut(s)	440, 887, 1306, 1466, 1979
Csp6I	GTAC	5 cut(s)	106, 942, 1087, 1291, 1678
CspCI	CAANNNNNGTGG	2 cut(s)	517, 552
CviQI	GTAC	5 cut(s)	106, 942, 1087, 1291, 1678
DdeI	CTNAG	4 cut(s)	654, 751, 807, 1287
DpnI	GATC	5 cut(s)	396, 849, 1021, 1106, 1224
DpnII	GATC	5 cut(s)	394, 847, 1019, 1104, 1222
DrdI	GACNNNNNNGTC	1 cut(s)	1099
DseDI	GACNNNNNNGTC	1 cut(s)	1099
EaeI	YGGCCR	2 cut(s)	55, 1134
Eam1104I	CTCTTC	3 cut(s)	31, 64, 1316
EarI	CTCTTC	3 cut(s)	31, 64, 1316
Eco130I	CCWWGG	5 cut(s)	1218, 1476, 1639, 1836, 1982
Eco47I	GGWCC	5 cut(s)	440, 887, 1306, 1466, 1979
Eco57I	CTGAAG	2 cut(s)	289, 341
Eco88I	CYCGRG	1 cut(s)	1614
EcoRI	GAATTC	1 cut(s)	787
EcoRII	CCWGG	2 cut(s)	57, 138
EcoT14I	CCWWGG	5 cut(s)	1218, 1476, 1639, 1836, 1982
ErhI	CCWWGG	5 cut(s)	1218, 1476, 1639, 1836, 1982
Esp3I	CGTCTC	1 cut(s)	650
FalI	AAGNNNNNCTT	4 cut(s)	28, 60, 1017, 1049
FaqI	GGGAC	4 cut(s)	353, 774, 1662, 1981
FauI	CCCGC	1 cut(s)	1189
FokI	GGATG	4 cut(s)	323, 347, 1504, 1975
FspBI	CTAG	5 cut(s)	674, 764, 1407, 1538, 1562
GlaI	GCGC	1 cut(s)	1988
GsaI	CCCAGC	1 cut(s)	1466
HaeII	RGCGCY	1 cut(s)	1990
HaeIII	GGCC	6 cut(s)	57, 133, 990, 1136, 1598, 1737
HapII	CCGG	3 cut(s)	96, 797, 1977
HhaI	GCGC	1 cut(s)	1989
Hin1I	GRCGYC	1 cut(s)	1514
Hin6I	GCGC	1 cut(s)	1987
HinP1I	GCGC	1 cut(s)	1987
HincII	GTYRAC	2 cut(s)	1512, 1798
HindII	GTYRAC	2 cut(s)	1512, 1798
HindIII	AAGCTT	1 cut(s)	489
HinfI	GANTC	4 cut(s)	1058, 1146, 1650, 1692
HpaII	CCGG	3 cut(s)	96, 797, 1977
HphI	GGTGA	5 cut(s)	161, 517, 701, 755, 2001
Hpy166II	GTNNAC	2 cut(s)	1512, 1798
Hpy188I	TCNGA	7 cut(s)	360, 754, 1154, 1259, 1373, 1813, 1891
Hpy188III	TCNNGA	4 cut(s)	579, 851, 1489, 1701
Hpy8I	GTNNAC	2 cut(s)	1512, 1798
HpyAV	CCTTC	6 cut(s)	82, 678, 764, 910, 1532, 1886
HpyCH4III	ACNGT	2 cut(s)	556, 1096
HpyCH4IV	ACGT	2 cut(s)	1278, 1514
HpyF3I	CTNAG	4 cut(s)	654, 751, 807, 1287
HpySE526I	ACGT	2 cut(s)	1278, 1514
Hsp92I	GRCGYC	1 cut(s)	1514
HspAI	GCGC	1 cut(s)	1987
Kzo9I	GATC	5 cut(s)	394, 847, 1019, 1104, 1222
LmnI	GCTCC	4 cut(s)	250, 1117, 1685, 1805
LweI	GCATC	8 cut(s)	201, 276, 301, 721, 965, 1263, 1454, 1817
MaeI	CTAG	5 cut(s)	674, 764, 1407, 1538, 1562
MaeII	ACGT	2 cut(s)	1278, 1514
MaeIII	GTNAC	3 cut(s)	898, 1420, 1432
MalI	GATC	5 cut(s)	396, 849, 1021, 1106, 1224
MboI	GATC	5 cut(s)	394, 847, 1019, 1104, 1222
MflI	RGATCY	2 cut(s)	1019, 1222
MhlI	GDGCHC	1 cut(s)	1114
MlsI	TGGCCA	2 cut(s)	57, 1136
MluCI	AATT	8 cut(s)	169, 593, 787, 1206, 1668, 1731, 1768, 1905
MluNI	TGGCCA	2 cut(s)	57, 1136
MlyI	GAGTC	2 cut(s)	1052, 1644
MmeI	TCCRAC	3 cut(s)	1493, 1645, 1882
Mox20I	TGGCCA	2 cut(s)	57, 1136
MroXI	GAANNNNTTC	1 cut(s)	73
MscI	TGGCCA	2 cut(s)	57, 1136
MseI	TTAA	9 cut(s)	215, 410, 1161, 1209, 1316, 1322, 1335, 1356, 1383
MslI	CAYNNNNRTG	2 cut(s)	239, 1928
Msp20I	TGGCCA	2 cut(s)	57, 1136
MspCI	CTTAAG	1 cut(s)	1382
MspI	CCGG	3 cut(s)	96, 797, 1977
MspR9I	CCNGG	3 cut(s)	59, 97, 140
Mva1269I	GAATGC	4 cut(s)	8, 422, 1484, 1943
MvaI	CCWGG	2 cut(s)	59, 140
MvnI	CGCG	1 cut(s)	542
NciI	CCSGG	1 cut(s)	97
NcoI	CCATGG	1 cut(s)	1476
NdeII	GATC	5 cut(s)	394, 847, 1019, 1104, 1222
NheI	GCTAGC	1 cut(s)	1537
NlaIV	GGNNCC	5 cut(s)	865, 1021, 1224, 1467, 1975
NmuCI	GTSAC	2 cut(s)	1420, 1432
NspI	RCATGY	3 cut(s)	616, 1497, 1569
PaeI	GCATGC	1 cut(s)	616
PctI	GAATGC	4 cut(s)	8, 422, 1484, 1943
PdmI	GAANNNNTTC	1 cut(s)	73
PfeI	GAWTC	2 cut(s)	1146, 1692
PflMI	CCANNNNNTGG	1 cut(s)	595
Ple19I	CGATCG	1 cut(s)	1107
PleI	GAGTC	2 cut(s)	1052, 1644
PpsI	GAGTC	2 cut(s)	1052, 1644
PsiI	TTATAA	1 cut(s)	1727
Psp6I	CCWGG	2 cut(s)	57, 138
PspFI	CCCAGC	1 cut(s)	1462
PspGI	CCWGG	2 cut(s)	57, 138
PspN4I	GGNNCC	5 cut(s)	865, 1021, 1224, 1467, 1975
PspPI	GGNCC	5 cut(s)	440, 887, 1306, 1466, 1979
PstNI	CAGNNNCTG	1 cut(s)	371
PsuI	RGATCY	2 cut(s)	1019, 1222
PvuI	CGATCG	1 cut(s)	1107
RsaI	GTAC	5 cut(s)	107, 943, 1088, 1292, 1679
RsaNI	GTAC	5 cut(s)	106, 942, 1087, 1291, 1678
RseI	CAYNNNNRTG	2 cut(s)	239, 1928
SaqAI	TTAA	9 cut(s)	215, 410, 1161, 1209, 1316, 1322, 1335, 1356, 1383
Sau3AI	GATC	5 cut(s)	394, 847, 1019, 1104, 1222
Sau96I	GGNCC	5 cut(s)	440, 887, 1306, 1466, 1979
ScaI	AGTACT	2 cut(s)	1088, 1292
SchI	GAGTC	2 cut(s)	1052, 1644
ScrFI	CCNGG	3 cut(s)	59, 97, 140
SduI	GDGCHC	1 cut(s)	1114
SfaNI	GCATC	8 cut(s)	201, 276, 301, 721, 965, 1263, 1454, 1817
SfcI	CTRYAG	2 cut(s)	384, 555
SinI	GGWCC	5 cut(s)	440, 887, 1306, 1466, 1979
SmiMI	CAYNNNNRTG	2 cut(s)	239, 1928
SmlI	CTYRAG	3 cut(s)	1382, 1699, 1994
SmoI	CTYRAG	3 cut(s)	1382, 1699, 1994
SphI	GCATGC	1 cut(s)	616
Sse9I	AATT	8 cut(s)	169, 593, 787, 1206, 1668, 1731, 1768, 1905
SsiI	CCGC	6 cut(s)	542, 696, 954, 1196, 1245, 1608
SspI	AATATT	1 cut(s)	212
SspMI	CTAG	5 cut(s)	674, 764, 1407, 1538, 1562
StyD4I	CCNGG	3 cut(s)	57, 95, 138
StyI	CCWWGG	5 cut(s)	1218, 1476, 1639, 1836, 1982
TaaI	ACNGT	2 cut(s)	556, 1096
TaiI	ACGT	2 cut(s)	1281, 1517
TaqI	TCGA	5 cut(s)	12, 159, 414, 959, 1103
TaqII	GACCGA	1 cut(s)	419
TasI	AATT	8 cut(s)	169, 593, 787, 1206, 1668, 1731, 1768, 1905
TatI	WGTACW	3 cut(s)	1086, 1290, 1677
TauI	GCSGC	1 cut(s)	698
TfiI	GAWTC	2 cut(s)	1146, 1692
Tru1I	TTAA	9 cut(s)	215, 410, 1161, 1209, 1316, 1322, 1335, 1356, 1383
Tru9I	TTAA	9 cut(s)	215, 410, 1161, 1209, 1316, 1322, 1335, 1356, 1383
TscAI	CASTG	5 cut(s)	187, 276, 450, 781, 1308
TseFI	GTSAC	2 cut(s)	1420, 1432
Tsp45I	GTSAC	2 cut(s)	1420, 1432
TspDTI	ATGAA	9 cut(s)	415, 581, 741, 783, 941, 1097, 1857, 1995, 2010
TspRI	CASTG	5 cut(s)	187, 276, 450, 781, 1308
Van91I	CCANNNNNTGG	1 cut(s)	595
Vha464I	CTTAAG	1 cut(s)	1382
VpaK11BI	GGWCC	5 cut(s)	440, 887, 1306, 1466, 1979
XapI	RAATTY	2 cut(s)	787, 1905
XceI	RCATGY	3 cut(s)	616, 1497, 1569
XcmI	CCANNNNNNNNNTGG	1 cut(s)	276
XmnI	GAANNNNTTC	1 cut(s)	73
XspI	CTAG	5 cut(s)	674, 764, 1407, 1538, 1562
ZraI	GACGTC	1 cut(s)	1515
ZrmI	AGTACT	2 cut(s)	1088, 1292

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.