Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0002447

Physical Location & Seq

Genomic Coordinates Forward (+)

1468874 .. 1472558

Gene Structure 3685 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG012100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1779 bp

ATGGGAGAGCAGCAAGATATGCATGAACAAGTGAGCTTTTGGAAGATGCCTGTTGATGTTTTCTTCAGGGATGCAAGGAATGTTTTCAAATGGGATGTGCTTGGTAAGGAGATACTGCAGATTGCAGTCCCTGCTGCTCTGGCTGTAGCTGCCGATCCTATCGCTTCCTTAATCGACACAGCTTTCATTGGTCATATAGGTCCAGTGGAACTAGCGGCAGCAGGAGTATCTATTGCCTTGTTCAATCAAGCTTCAAGGATTACTATATTCCCACTTGTCAGTATCACCACCTCCTTTGTTGCCGAGGAAGATACTGTAGCAAAAATAAAAGCAGGAAAAGGCCAGAAATTGGAGAAGGGTTCAGACATGCTTGATGACCTGGAAAAAGGGGTTGCTAAACCAAAACCTGAGACGAAAGAGCCTGCACTAGATGATGAAAATGGTGAATCCTCAGAAATGGGCAAGCATCTGGGAAATGATGAAGACAAGGAAAATGGTGAGAACTCAGACAAGATACTAGATGAAGGCAGTGAAGCAAAGAATTCCATATCGGAAAATGCTAAGCTGGAGAATGGAGAGAAAGGTGTTCCTAAAAACAGTGAACCACAAGAAAATGGTTCCAAGACAAATATTGAAACCGGTCCATCTGTTGTTACGAGCAAAAATAAGAAGCCAAAGATGAAGAACAAAAAGCTTAATATTGCTTCCGCATCAACAGCACTCATCTTCGGTGCAATACTTGGCCTCCTGCAAGCTATATTTCTCATGTTAGGATCCAAAGTTCTTCTTGGTGTGATGGGTGTGAAACATGACTCCCCTATGCTAAAACCAGCAATGAAGTACTTGAGAGTAAGGTCGATCGGTGCACCTGCTGTTCTTCTTACATTGGCCATGCAAGGAATCTTCCGAGGGTTTAAGGATACTAAAACTCCTTTATATGTCATTGTTGCGGGATATGCAATTAACATTGCCTTGGATCCACTTCTCATCTTTGTATGCGGTTTCGGCATCAGAGGTGCAGCTATTGCACACGTTCTTTCTCAGTACTTGATGGCACTGGTCCTCTTCTTAATCTTAATGAGAAAAGTTAATCTCATGCCACCAAGTGTTAAAGACCTGCAGTTTGGCAAGTTTCTTAAGAATGGTTCTCTATTGTTGGCTAGGGTTGTTGCTGTGACATTCTGTGTCACCTTAGCTGCATCTTTGGCAGCACGGCAGGGTCCAACTCCCATGGCTGCATTCCAGACATGCTTACAAGTCTGGTTGACATCATCCCTTCTTGCTGATGGGCTAGCTGTTGCAGGACAGGCTATTCTAGCATGTGCATTTACTGAGAAAGACTACAAAAAGGCCACAGCTACCGCAACTCGGGTATTACAGATGGGATTTATCCTTGGTGTGGGACTCGCTCTTGTTGTTGGAGTTGGTTTGTACTTTGGAGCTGGAATCTTCTCAAAAGATGTCAATGTTTTGCACCTTATAAAAATTGGCCTCCCTTTTGTTGCAGCAACACAACCAATTAATTCCCTCTCTTTTGTGTTTGATGGTGTTAACTTTGGAGCATCTGACTTTGCATACTCTGCATATTCCTTGGTTCTGGTGGCTATAGCAAGCATTGTTTCATTGTTCCTTCTCTCTAAATCCGATGGATTTGTTGGCATTTGGATTGCTTTGACTATCTATATGGGGTTGCGTGCATTCGCTGGCGTATGGAGGATGGGGACTGGAACCGGACCCTGGCGCTTTCTCAAGGGTCGTTCATCACCACAGCTTTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006820 GO:0006842 GO:0006855 GO:0006873 GO:0006875 GO:0006879 GO:0006950 GO:0006979 GO:0007154 GO:0008150 GO:0008324 GO:0008509 GO:0008514 GO:0009267 GO:0009605 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0015075 GO:0015137 GO:0015142 GO:0015238 GO:0015318 GO:0015711 GO:0015746 GO:0015849 GO:0015893 GO:0016020 GO:0016036 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0031667 GO:0031668 GO:0031669 GO:0032870 GO:0033554 GO:0033993 GO:0034220 GO:0034599 GO:0034614 GO:0035674 GO:0035690 GO:0042221 GO:0042493 GO:0042592 GO:0042594 GO:0042891 GO:0042895 GO:0044464 GO:0046873 GO:0046916 GO:0046942 GO:0046943 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071369 GO:0071495 GO:0071496 GO:0071702 GO:0071731 GO:0071732 GO:0071944 GO:0097305 GO:0097366 GO:0098655 GO:0098656 GO:0098771 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902170 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

592

Amino Acids

63.24

Weight (kDa)

9.01

Isoelectric Point (pI)

30.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	236 - 328	3.6e-13	MatE
MatE	PF01554	390 - 540	1.8e-10	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002447)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08040 AT3G08040
fragaria_vesca	FvH4_7g01040 FvH4_7g01040 FvH4_7g01040 FvH4_7g01040 FvH4_7g01040
malus_domestica	MD02G1311900.v1.1 MD07G1010700.v1.1
prunus_persica	Prupe.2G013000_v2.0.a1 Prupe.2G013000_v2.0.a1 Prupe.2G013000_v2.0.a1 Prupe.2G013100_v2.0.a1
pyrus_communis	pycom02g26180 pycom07g00880
rosa_chinensis	RchiOBHm_Chr1g0315981 RchiOBHm_Chr1g0316021
rosa_laevigata	RLG00000030710 RLG00000030716 RLG00000030718
rosa_multiflora	Rmu_sc0002014.1_g000023 Rmu_sc0002531.1_g000056 Rmu_sc0004566.1_g000010 Rmu_sc0005954.1_g000026
rosa_roxburghii	Rroxscaffold_4G00331210 Rroxscaffold_4G00331270
rosa_rugosa	Rorug01G0007300 Rorug01G0007400 Rorug01G0007500 Rorug01G0007600 Rorug01G0008000 Rorug01G0008100
rosa_samantha	Rh1AG018100 Rh1BG011500 Rh1BG012100 Rh1CG015400 Rh1CG015900 Rh1DG011200 Rh1DG012000
rosa_wichuraiana	Rw1G001120 Rw1G001160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1481
AarI	CACCTGC	1 cut(s)	877
Acc36I	ACCTGC	2 cut(s)	877, 1125
AccB7I	CCANNNNNTGG	1 cut(s)	349
AciI	CCGC	5 cut(s)	215, 708, 950, 999, 1362
AclWI	GGATC	5 cut(s)	149, 768, 781, 971, 984
AcoI	YGGCCR	1 cut(s)	888
AcsI	RAATTY	1 cut(s)	541
AcuI	CTGAAG	1 cut(s)	49
AdeI	CACNNNGTG	1 cut(s)	1106
AfaI	GTAC	3 cut(s)	842, 1046, 1433
AfiI	CCNNNNNNNGG	4 cut(s)	349, 1368, 1399, 1737
AflII	CTTAAG	1 cut(s)	1136
AflIII	ACRYGT	1 cut(s)	1030
AgeI	ACCGGT	1 cut(s)	638
AgsI	TTSAA	4 cut(s)	88, 244, 255, 635
AjnI	CCWGG	2 cut(s)	378, 1736
AloI	GAACNNNNNNTCC	2 cut(s)	765, 797
Alw21I	GWGCWC	1 cut(s)	868
Alw26I	GTCTC	1 cut(s)	404
Alw44I	GTGCAC	1 cut(s)	864
AlwI	GGATC	5 cut(s)	149, 768, 781, 971, 984
AlwNI	CAGNNNCTG	1 cut(s)	131
Ama87I	CYCGRG	1 cut(s)	1368
AoxI	GGCC	5 cut(s)	340, 742, 888, 1350, 1489
ApaLI	GTGCAC	1 cut(s)	864
ApeKI	GCWGC	9 cut(s)	10, 134, 149, 218, 1019, 1196, 1208, 1235, 1505
ApoI	RAATTY	1 cut(s)	541
ArsI	GACNNNNNNTTYG	2 cut(s)	1106, 1138
AseI	ATTAAT	1 cut(s)	1521
AsiGI	ACCGGT	1 cut(s)	638
Asp700I	GAANNNNTTC	1 cut(s)	83
AspLEI	GCGC	1 cut(s)	1743
AspS9I	GGNCC	5 cut(s)	200, 641, 1060, 1220, 1733
AsuHPI	GGTGA	5 cut(s)	277, 455, 509, 1180, 1755
AsuNHI	GCTAGC	1 cut(s)	1291
AvaI	CYCGRG	1 cut(s)	1368
AvaII	GGWCC	5 cut(s)	200, 641, 1060, 1220, 1733
BaeGI	GKGCMC	1 cut(s)	868
BalI	TGGCCA	1 cut(s)	890
BamHI	GGATCC	2 cut(s)	773, 976
BbsI	GAAGAC	1 cut(s)	489
Bbv12I	GWGCWC	1 cut(s)	868
BbvI	GCAGC	9 cut(s)	22, 121, 136, 230, 1031, 1183, 1220, 1222, 1517
BccI	CCATC	8 cut(s)	652, 790, 1045, 1280, 1375, 1538, 1640, 1711
BceAI	ACGGC	1 cut(s)	1229
BciT130I	CCWGG	2 cut(s)	380, 1738
BciVI	GTATCC	1 cut(s)	913
BcoDI	GTCTC	1 cut(s)	404
BfaI	CTAG	6 cut(s)	212, 428, 518, 1161, 1292, 1316
BfmI	CTRYAG	5 cut(s)	116, 144, 315, 1118, 1605
BfoI	RGCGCY	1 cut(s)	1744
BfrI	CTTAAG	1 cut(s)	1136
BfuAI	ACCTGC	2 cut(s)	877, 1125
BfuI	GTATCC	1 cut(s)	913
BlpI	GCTNAGC	1 cut(s)	561
BmcAI	AGTACT	2 cut(s)	842, 1046
Bme1390I	CCNGG	2 cut(s)	380, 1738
Bme18I	GGWCC	5 cut(s)	200, 641, 1060, 1220, 1733
BmeT110I	CYCGRG	1 cut(s)	1368
BmgT120I	GGNCC	5 cut(s)	200, 641, 1060, 1220, 1733
BmiI	GGNNCC	6 cut(s)	619, 775, 978, 1221, 1729, 1735
BmrFI	CCNGG	2 cut(s)	380, 1738
BmsI	GCATC	7 cut(s)	36, 61, 475, 719, 1017, 1208, 1571
BmtI	GCTAGC	1 cut(s)	1295
BpiI	GAAGAC	1 cut(s)	489
BpmI	CTGGAG	1 cut(s)	587
Bpu10I	CCTNAGC	1 cut(s)	1192
Bpu1102I	GCTNAGC	1 cut(s)	561
BpuEI	CTTGAG	2 cut(s)	865, 1733
BsaJI	CCNNGG	7 cut(s)	303, 907, 972, 1230, 1393, 1590, 1736
BsaWI	WCCGGW	2 cut(s)	638, 1730
BsaXI	ACNNNNNCTCC	4 cut(s)	729, 759, 913, 943
Bsc4I	CCNNNNNNNGG	4 cut(s)	349, 1368, 1399, 1737
Bse118I	RCCGGY	1 cut(s)	638
Bse1I	ACTGG	3 cut(s)	203, 1062, 1729
Bse3DI	GCAATG	2 cut(s)	840, 966
BseBI	CCWGG	2 cut(s)	380, 1738
BseDI	CCNNGG	7 cut(s)	303, 907, 972, 1230, 1393, 1590, 1736
BseGI	GGATG	4 cut(s)	76, 100, 1271, 1722
BseLI	CCNNNNNNNGG	4 cut(s)	349, 1368, 1399, 1737
BseMI	GCAATG	2 cut(s)	840, 966
BseMII	CTCAG	5 cut(s)	399, 465, 519, 1055, 1323
BseNI	ACTGG	3 cut(s)	203, 1062, 1729
BseSI	GKGCMC	1 cut(s)	868
BseXI	GCAGC	9 cut(s)	22, 121, 136, 230, 1031, 1183, 1220, 1222, 1517
BsgI	GTGCAG	2 cut(s)	408, 1038
Bsh1285I	CGRYCG	1 cut(s)	861
BshFI	GGCC	5 cut(s)	342, 744, 890, 1352, 1491
BshTI	ACCGGT	1 cut(s)	638
BsiEI	CGRYCG	1 cut(s)	861
BsiHKAI	GWGCWC	1 cut(s)	868
BsiHKCI	CYCGRG	1 cut(s)	1368
BsiSI	CCGG	2 cut(s)	639, 1731
BslFI	GGGAC	3 cut(s)	113, 1416, 1735
BslI	CCNNNNNNNGG	4 cut(s)	349, 1368, 1399, 1737
BsmAI	GTCTC	1 cut(s)	404
BsmBI	CGTCTC	1 cut(s)	404
BsmFI	GGGAC	3 cut(s)	113, 1416, 1735
BsmI	GAATGC	2 cut(s)	1238, 1697
BsnI	GGCC	5 cut(s)	342, 744, 890, 1352, 1491
BsoBI	CYCGRG	1 cut(s)	1368
Bsp1286I	GDGCHC	1 cut(s)	868
Bsp143I	GATC	4 cut(s)	154, 773, 858, 976
Bsp1720I	GCTNAGC	1 cut(s)	561
Bsp19I	CCATGG	1 cut(s)	1230
BspACI	CCGC	5 cut(s)	215, 708, 950, 999, 1362
BspANI	GGCC	5 cut(s)	342, 744, 890, 1352, 1491
BspCNI	CTCAG	5 cut(s)	400, 464, 518, 1054, 1324
BspLI	GGNNCC	6 cut(s)	619, 775, 978, 1221, 1729, 1735
BspMAI	CTGCAG	2 cut(s)	120, 1122
BspMI	ACCTGC	2 cut(s)	877, 1125
BspOI	GCTAGC	1 cut(s)	1295
BspPI	GGATC	5 cut(s)	149, 768, 781, 971, 984
BspTI	CTTAAG	1 cut(s)	1136
BsrDI	GCAATG	2 cut(s)	840, 966
BsrFI	RCCGGY	1 cut(s)	638
BsrI	ACTGG	3 cut(s)	203, 1062, 1729
BssAI	RCCGGY	1 cut(s)	638
BssECI	CCNNGG	7 cut(s)	303, 907, 972, 1230, 1393, 1590, 1736
BssMI	GATC	4 cut(s)	154, 773, 858, 976
BssT1I	CCWWGG	4 cut(s)	972, 1230, 1393, 1590
Bst2UI	CCWGG	2 cut(s)	380, 1738
Bst4CI	ACNGT	2 cut(s)	316, 599
Bst6I	CTCTTC	1 cut(s)	1070
BstAFI	CTTAAG	1 cut(s)	1136
BstAPI	GCANNNNNTGC	4 cut(s)	19, 131, 1025, 1580
BstC8I	GCNNGC	7 cut(s)	423, 464, 753, 1293, 1612, 1695, 1705
BstDEI	CTNAG	7 cut(s)	408, 451, 505, 561, 1041, 1192, 1332
BstDSI	CCRYGG	1 cut(s)	1230
BstF5I	GGATG	4 cut(s)	76, 100, 1271, 1722
BstH2I	RGCGCY	1 cut(s)	1744
BstHHI	GCGC	1 cut(s)	1743
BstKTI	GATC	4 cut(s)	157, 776, 861, 979
BstMAI	GTCTC	1 cut(s)	404
BstMBI	GATC	4 cut(s)	154, 773, 858, 976
BstMCI	CGRYCG	1 cut(s)	861
BstNI	CCWGG	2 cut(s)	380, 1738
BstNSI	RCATGY	3 cut(s)	370, 1251, 1323
BstSCI	CCNGG	2 cut(s)	378, 1736
BstSFI	CTRYAG	5 cut(s)	116, 144, 315, 1118, 1605
BstSLI	GKGCMC	1 cut(s)	868
BstV1I	GCAGC	9 cut(s)	22, 121, 136, 230, 1031, 1183, 1220, 1222, 1517
BstV2I	GAAGAC	1 cut(s)	489
BstX2I	RGATCY	2 cut(s)	773, 976
BstYI	RGATCY	2 cut(s)	773, 976
BsuI	GTATCC	1 cut(s)	913
BsuRI	GGCC	5 cut(s)	342, 744, 890, 1352, 1491
BtgI	CCRYGG	1 cut(s)	1230
BtsCI	GGATG	4 cut(s)	76, 100, 1271, 1722
BtsI	GCAGTG	1 cut(s)	535
BtsIMutI	CAGTG	4 cut(s)	210, 535, 604, 1055
BveI	ACCTGC	2 cut(s)	877, 1125
Cac8I	GCNNGC	7 cut(s)	423, 464, 753, 1293, 1612, 1695, 1705
CaiI	CAGNNNCTG	1 cut(s)	131
CfoI	GCGC	1 cut(s)	1743
Cfr10I	RCCGGY	1 cut(s)	638
Cfr13I	GGNCC	5 cut(s)	200, 641, 1060, 1220, 1733
Csp6I	GTAC	3 cut(s)	841, 1045, 1432
CspAI	ACCGGT	1 cut(s)	638
CspCI	CAANNNNNGTGG	2 cut(s)	277, 312
CviAII	CATG	9 cut(s)	23, 367, 766, 809, 892, 1096, 1231, 1248, 1320
CviQI	GTAC	3 cut(s)	841, 1045, 1432
DdeI	CTNAG	7 cut(s)	408, 451, 505, 561, 1041, 1192, 1332
DpnI	GATC	4 cut(s)	156, 775, 860, 978
DpnII	GATC	4 cut(s)	154, 773, 858, 976
DraIII	CACNNNGTG	1 cut(s)	1106
EaeI	YGGCCR	1 cut(s)	888
Eam1104I	CTCTTC	1 cut(s)	1070
EarI	CTCTTC	1 cut(s)	1070
Eco130I	CCWWGG	4 cut(s)	972, 1230, 1393, 1590
Eco47I	GGWCC	5 cut(s)	200, 641, 1060, 1220, 1733
Eco57I	CTGAAG	1 cut(s)	49
Eco88I	CYCGRG	1 cut(s)	1368
EcoRI	GAATTC	1 cut(s)	541
EcoRII	CCWGG	2 cut(s)	378, 1736
EcoT14I	CCWWGG	4 cut(s)	972, 1230, 1393, 1590
EcoT22I	ATGCAT	1 cut(s)	24
ErhI	CCWWGG	4 cut(s)	972, 1230, 1393, 1590
Esp3I	CGTCTC	1 cut(s)	404
FaeI	CATG	9 cut(s)	26, 370, 769, 812, 895, 1099, 1234, 1251, 1323
FalI	AAGNNNNNCTT	2 cut(s)	771, 803
FaqI	GGGAC	3 cut(s)	113, 1416, 1735
FatI	CATG	9 cut(s)	22, 366, 765, 808, 891, 1095, 1230, 1247, 1319
FauI	CCCGC	1 cut(s)	943
FokI	GGATG	4 cut(s)	83, 107, 1258, 1729
FspBI	CTAG	6 cut(s)	212, 428, 518, 1161, 1292, 1316
GlaI	GCGC	1 cut(s)	1742
GsuI	CTGGAG	1 cut(s)	587
HaeII	RGCGCY	1 cut(s)	1744
HaeIII	GGCC	5 cut(s)	342, 744, 890, 1352, 1491
HapII	CCGG	2 cut(s)	639, 1731
HhaI	GCGC	1 cut(s)	1743
Hin1II	CATG	9 cut(s)	26, 370, 769, 812, 895, 1099, 1234, 1251, 1323
Hin6I	GCGC	1 cut(s)	1741
HinP1I	GCGC	1 cut(s)	1741
HincII	GTYRAC	2 cut(s)	1266, 1552
HindII	GTYRAC	2 cut(s)	1266, 1552
HindIII	AAGCTT	2 cut(s)	249, 692
HinfI	GANTC	5 cut(s)	446, 812, 900, 1404, 1446
HpaI	GTTAAC	1 cut(s)	1552
HpaII	CCGG	2 cut(s)	639, 1731
HphI	GGTGA	5 cut(s)	277, 455, 509, 1180, 1755
Hpy166II	GTNNAC	4 cut(s)	602, 866, 1266, 1552
Hpy188I	TCNGA	8 cut(s)	364, 454, 508, 553, 908, 1013, 1567, 1645
Hpy188III	TCNNGA	1 cut(s)	1243
Hpy8I	GTNNAC	4 cut(s)	602, 866, 1266, 1552
HpyAV	CCTTC	4 cut(s)	349, 518, 1286, 1640
HpyCH4III	ACNGT	2 cut(s)	316, 599
HpyCH4IV	ACGT	1 cut(s)	1032
HpyF3I	CTNAG	7 cut(s)	408, 451, 505, 561, 1041, 1192, 1332
HpySE526I	ACGT	1 cut(s)	1032
Hsp92II	CATG	9 cut(s)	26, 370, 769, 812, 895, 1099, 1234, 1251, 1323
HspAI	GCGC	1 cut(s)	1741
KspAI	GTTAAC	1 cut(s)	1552
Kzo9I	GATC	4 cut(s)	154, 773, 858, 976
LmnI	GCTCC	2 cut(s)	1439, 1559
Lsp1109I	GCAGC	9 cut(s)	22, 121, 136, 230, 1031, 1183, 1220, 1222, 1517
LweI	GCATC	7 cut(s)	36, 61, 475, 719, 1017, 1208, 1571
MaeI	CTAG	6 cut(s)	212, 428, 518, 1161, 1292, 1316
MaeII	ACGT	1 cut(s)	1032
MaeIII	GTNAC	3 cut(s)	652, 1174, 1186
MalI	GATC	4 cut(s)	156, 775, 860, 978
MboI	GATC	4 cut(s)	154, 773, 858, 976
MflI	RGATCY	2 cut(s)	773, 976
MhlI	GDGCHC	1 cut(s)	868
MlsI	TGGCCA	1 cut(s)	890
MluCI	AATT	6 cut(s)	347, 541, 960, 1485, 1518, 1522
MluNI	TGGCCA	1 cut(s)	890
MlyI	GAGTC	2 cut(s)	806, 1398
MmeI	TCCRAC	2 cut(s)	1247, 1399
Mox20I	TGGCCA	1 cut(s)	890
Mph1103I	ATGCAT	1 cut(s)	24
MroXI	GAANNNNTTC	1 cut(s)	83
MscI	TGGCCA	1 cut(s)	890
Msp20I	TGGCCA	1 cut(s)	890
MspCI	CTTAAG	1 cut(s)	1136
MspI	CCGG	2 cut(s)	639, 1731
MspR9I	CCNGG	2 cut(s)	380, 1738
Mva1269I	GAATGC	2 cut(s)	1238, 1697
MvaI	CCWGG	2 cut(s)	380, 1738
NcoI	CCATGG	1 cut(s)	1230
NdeII	GATC	4 cut(s)	154, 773, 858, 976
NheI	GCTAGC	1 cut(s)	1291
NlaIII	CATG	9 cut(s)	26, 370, 769, 812, 895, 1099, 1234, 1251, 1323
NlaIV	GGNNCC	6 cut(s)	619, 775, 978, 1221, 1729, 1735
NmeAIII	GCCGAG	1 cut(s)	328
NmuCI	GTSAC	2 cut(s)	1174, 1186
NsiI	ATGCAT	1 cut(s)	24
NspI	RCATGY	3 cut(s)	370, 1251, 1323
PaqCI	CACCTGC	1 cut(s)	877
PctI	GAATGC	2 cut(s)	1238, 1697
PdmI	GAANNNNTTC	1 cut(s)	83
PfeI	GAWTC	3 cut(s)	446, 900, 1446
PflMI	CCANNNNNTGG	1 cut(s)	349
PinAI	ACCGGT	1 cut(s)	638
Ple19I	CGATCG	1 cut(s)	861
PleI	GAGTC	2 cut(s)	806, 1398
PpsI	GAGTC	2 cut(s)	806, 1398
PshBI	ATTAAT	1 cut(s)	1521
PsiI	TTATAA	1 cut(s)	1481
Psp6I	CCWGG	2 cut(s)	378, 1736
PspGI	CCWGG	2 cut(s)	378, 1736
PspN4I	GGNNCC	6 cut(s)	619, 775, 978, 1221, 1729, 1735
PspPI	GGNCC	5 cut(s)	200, 641, 1060, 1220, 1733
PstI	CTGCAG	2 cut(s)	120, 1122
PstNI	CAGNNNCTG	1 cut(s)	131
PsuI	RGATCY	2 cut(s)	773, 976
PvuI	CGATCG	1 cut(s)	861
RsaI	GTAC	3 cut(s)	842, 1046, 1433
RsaNI	GTAC	3 cut(s)	841, 1045, 1432
Sau3AI	GATC	4 cut(s)	154, 773, 858, 976
Sau96I	GGNCC	5 cut(s)	200, 641, 1060, 1220, 1733
ScaI	AGTACT	2 cut(s)	842, 1046
SchI	GAGTC	2 cut(s)	806, 1398
ScrFI	CCNGG	2 cut(s)	380, 1738
SduI	GDGCHC	1 cut(s)	868
SfaNI	GCATC	7 cut(s)	36, 61, 475, 719, 1017, 1208, 1571
SfcI	CTRYAG	5 cut(s)	116, 144, 315, 1118, 1605
SinI	GGWCC	5 cut(s)	200, 641, 1060, 1220, 1733
SmlI	CTYRAG	3 cut(s)	844, 1136, 1748
SmoI	CTYRAG	3 cut(s)	844, 1136, 1748
Sse9I	AATT	6 cut(s)	347, 541, 960, 1485, 1518, 1522
SsiI	CCGC	5 cut(s)	215, 708, 950, 999, 1362
SspI	AATATT	2 cut(s)	631, 700
SspMI	CTAG	6 cut(s)	212, 428, 518, 1161, 1292, 1316
StyD4I	CCNGG	2 cut(s)	378, 1736
StyI	CCWWGG	4 cut(s)	972, 1230, 1393, 1590
TaaI	ACNGT	2 cut(s)	316, 599
TaiI	ACGT	1 cut(s)	1035
TaqI	TCGA	2 cut(s)	174, 857
TasI	AATT	6 cut(s)	347, 541, 960, 1485, 1518, 1522
TatI	WGTACW	3 cut(s)	840, 1044, 1431
TauI	GCSGC	1 cut(s)	218
TfiI	GAWTC	3 cut(s)	446, 900, 1446
TscAI	CASTG	4 cut(s)	210, 535, 604, 1062
TseFI	GTSAC	2 cut(s)	1174, 1186
TseI	GCWGC	9 cut(s)	10, 134, 149, 218, 1019, 1196, 1208, 1235, 1505
Tsp45I	GTSAC	2 cut(s)	1174, 1186
TspRI	CASTG	4 cut(s)	210, 535, 604, 1062
Van91I	CCANNNNNTGG	1 cut(s)	349
Vha464I	CTTAAG	1 cut(s)	1136
VneI	GTGCAC	1 cut(s)	864
VpaK11BI	GGWCC	5 cut(s)	200, 641, 1060, 1220, 1733
VspI	ATTAAT	1 cut(s)	1521
XapI	RAATTY	1 cut(s)	541
XceI	RCATGY	3 cut(s)	370, 1251, 1323
XmnI	GAANNNNTTC	1 cut(s)	83
XspI	CTAG	6 cut(s)	212, 428, 518, 1161, 1292, 1316
ZrmI	AGTACT	2 cut(s)	842, 1046
Zsp2I	ATGCAT	1 cut(s)	24

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.