Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002014.1

Orthogroup ID

OG0002447

Physical Location & Seq

Genomic Coordinates Reverse (-)

88577 .. 94514

Gene Structure 5938 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002014.1_g000023.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

atgcctgttgatgttttcttcagggatgcaaggaatgttttcaaatgggatgtgcttggtaaggagatactgcagattgcagtccctgctgccctggctgtagctgctgatcctctcgcttccttaatcgacacagctttcattggtcatataggtccggtggaactagcggcagcaggagtatctattgccttgttcaatcaagcttcaaggattactatattcccacttgtcagtgtcaccacctcctttgttgccgaggaagatactgtagcaaaaatgaaaataaaagcaggaaaaggcctgaaattgaagaagggttcagacatgcttgatgacctggaaaagggggttgctaaaccaaaacctgagacgaaagagcctgcactagatgatgaaaatggtgaatcctcagaaatgggcaagcatctgggaattgatgaagacaaggaaactggtgagaactcagacaagatactaaatgaaggcagtgaagcaaagaattccatatcggaaaatgctaagctggagaatggagagaaaggtgttcctaaaagtagtgaaccacaagaaaatggttccaagacaggtattgtaaacggtccatctgttgttatgagcaaaaataagaagacaaagatgaagaacaaaaagcgtactattgcttccgcatcgacagcactcatcttcggtgcaatacttggcctgctgcaagctatatttctcatgttaggatccaaagttcttcttggtgttatgggtgtgaaacatgactcccccatgctaaaaccagcaatgaagtacttgacagtaaggtcgatcggtgcacctgctgttcttcttacattggccatgcaaggaatcttccgagggtttaaggatactaaaactcctttatatgtcattgttgtgggatatgcaattaacattgccttggatccacttctcatctttgtatgcggtttcggcatcagaggtgcagctattgcacacgttctttctcagtacttgatggcactggtcctcttcttaatcttaatgagaaaagttaatctcatgccaccgagtgttaaagacttgcagtttggcaagtttcttaagaatggttctctattgttggctagggttgttgctgtgacattctgtgtcaccttagctgcatctttggcagcacggcagggtccaactcccatggctgcattccagacatgcttacaagtctggttgacatcatcccttcttgctgatgggctagctgttgcaggacaggctattctagcatgtgcatttgctgagaaagactacaaaaaggccacagctacggcaactcgggtattacagatgggatttatccttggtgtgggactcgctcttgttgttggagttggtttgtactttggagctggaatcttctcgaaagatggcaatgttttgcaccttataaaaattggcctccctgttctggtggctatagcaagcattgtttcattgttccttctctctaaatccgatggttttgttggcatttggattgctttgactatctatatggggttgcgtgcattcgctggcgtatggaggatggggactggaaccggaccctggcgctttctcaagggtggttcatcaccacagctttcccactccaaacctgtcacatcagaaactcttcagtctcctaaaacccagaaaccctttgtcccagacaatcctccttatcgaaacccagaaatggctcctccaaagaaaatagttatcgatcaggaggaagaactcaacgagaaagagaccactgtttctcagactcccgaattaacatgtcggactgggcccggcaccccgagattccattccagacgacgctatcgccctctacggcctacccatccgtcgacctattccgcttctctgcaggacccctggagatttcagcagttggggtgcgcaaaaacaacgagcgaaaatagggcactggccatcctcgatcagcgcggcggagctttcttagtatcgcgaagcgtgagcgcgagatctggctcgctggaacgtagcaggtattacccaaaccatcgatttatgttttcgccttcctcgtggtggcaatcgctcgcctctcactgccttcctttgcttttggaatactgccaccaacacctttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006820 GO:0006842 GO:0006855 GO:0006873 GO:0006875 GO:0006879 GO:0006950 GO:0006979 GO:0007154 GO:0008150 GO:0008324 GO:0008509 GO:0008514 GO:0009267 GO:0009605 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0015075 GO:0015137 GO:0015142 GO:0015238 GO:0015318 GO:0015711 GO:0015746 GO:0015849 GO:0015893 GO:0016020 GO:0016036 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0031667 GO:0031668 GO:0031669 GO:0032870 GO:0033554 GO:0033993 GO:0034220 GO:0034599 GO:0034614 GO:0035674 GO:0035690 GO:0042221 GO:0042493 GO:0042592 GO:0042594 GO:0042891 GO:0042895 GO:0044464 GO:0046873 GO:0046916 GO:0046942 GO:0046943 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071369 GO:0071495 GO:0071496 GO:0071702 GO:0071731 GO:0071732 GO:0071944 GO:0097305 GO:0097366 GO:0098655 GO:0098656 GO:0098771 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902170 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

719

Amino Acids

77.7

Weight (kDa)

9.54

Isoelectric Point (pI)

36.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002447)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08040 AT3G08040
fragaria_vesca	FvH4_7g01040 FvH4_7g01040 FvH4_7g01040 FvH4_7g01040 FvH4_7g01040
malus_domestica	MD02G1311900.v1.1 MD07G1010700.v1.1
prunus_persica	Prupe.2G013000_v2.0.a1 Prupe.2G013000_v2.0.a1 Prupe.2G013000_v2.0.a1 Prupe.2G013100_v2.0.a1
pyrus_communis	pycom02g26180 pycom07g00880
rosa_chinensis	RchiOBHm_Chr1g0315981 RchiOBHm_Chr1g0316021
rosa_laevigata	RLG00000030710 RLG00000030716 RLG00000030718
rosa_multiflora	Rmu_sc0002014.1_g000023 Rmu_sc0002531.1_g000056 Rmu_sc0004566.1_g000010 Rmu_sc0005954.1_g000026
rosa_roxburghii	Rroxscaffold_4G00331210 Rroxscaffold_4G00331270
rosa_rugosa	Rorug01G0007300 Rorug01G0007400 Rorug01G0007500 Rorug01G0007600 Rorug01G0008000 Rorug01G0008100
rosa_samantha	Rh1AG018100 Rh1BG011500 Rh1BG012100 Rh1CG015400 Rh1CG015900 Rh1DG011200 Rh1DG012000
rosa_wichuraiana	Rw1G001120 Rw1G001160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1442
AarI	CACCTGC	1 cut(s)	838
AasI	GACNNNNNNGTC	1 cut(s)	814
Acc16I	TGCGCA	1 cut(s)	1945
Acc36I	ACCTGC	2 cut(s)	838, 2043
AccB1I	GGYRCC	1 cut(s)	1835
AccI	GTMKAC	1 cut(s)	1892
AccII	CGCG	3 cut(s)	1992, 2014, 2027
AciI	CCGC	6 cut(s)	170, 669, 960, 1902, 1992, 1995
AclWI	GGATC	5 cut(s)	104, 729, 742, 932, 945
AcoI	YGGCCR	2 cut(s)	849, 1974
AcsI	RAATTY	1 cut(s)	502
AcuI	CTGAAG	2 cut(s)	4, 1655
AdeI	CACNNNGTG	1 cut(s)	1067
AfaI	GTAC	4 cut(s)	658, 803, 1007, 1394
AfiI	CCNNNNNNNGG	6 cut(s)	346, 1360, 1462, 1602, 1732, 2097
AflII	CTTAAG	1 cut(s)	1097
AflIII	ACRYGT	2 cut(s)	991, 1817
AgsI	TTSAA	4 cut(s)	43, 199, 210, 313
AjnI	CCWGG	4 cut(s)	93, 339, 1601, 1919
AloI	GAACNNNNNNTCC	2 cut(s)	726, 758
Alw21I	GWGCWC	1 cut(s)	829
Alw26I	GTCTC	3 cut(s)	365, 1680, 1781
Alw44I	GTGCAC	1 cut(s)	825
AlwI	GGATC	5 cut(s)	104, 729, 742, 932, 945
AlwNI	CAGNNNCTG	1 cut(s)	86
Ama87I	CYCGRG	2 cut(s)	1329, 1840
AoxI	GGCC	8 cut(s)	301, 703, 849, 1311, 1450, 1829, 1877, 1974
ApaI	GGGCCC	1 cut(s)	1833
ApaLI	GTGCAC	1 cut(s)	825
ApeKI	GCWGC	8 cut(s)	89, 104, 173, 709, 980, 1157, 1169, 1196
ApoI	RAATTY	1 cut(s)	502
ArsI	GACNNNNNNTTYG	2 cut(s)	1067, 1099
Asp700I	GAANNNNTTC	2 cut(s)	38, 1668
AspLEI	GCGC	4 cut(s)	1608, 1946, 1992, 2027
AspS9I	GGNCC	8 cut(s)	155, 602, 1021, 1181, 1598, 1829, 1830, 1915
AsuC2I	CCSGG	1 cut(s)	1833
AsuHPI	GGTGA	5 cut(s)	232, 416, 470, 1141, 1620
AsuNHI	GCTAGC	1 cut(s)	1252
AvaI	CYCGRG	2 cut(s)	1329, 1840
AvaII	GGWCC	6 cut(s)	155, 602, 1021, 1181, 1598, 1915
BaeGI	GKGCMC	3 cut(s)	829, 1833, 1972
BalI	TGGCCA	2 cut(s)	851, 1976
BamHI	GGATCC	2 cut(s)	734, 937
BanI	GGYRCC	1 cut(s)	1835
BanII	GRGCYC	1 cut(s)	1833
BarI	GAAGNNNNNNTAC	2 cut(s)	649, 681
BauI	CACGAG	1 cut(s)	2092
BbsI	GAAGAC	2 cut(s)	450, 638
Bbv12I	GWGCWC	1 cut(s)	829
BbvI	GCAGC	8 cut(s)	76, 91, 185, 696, 992, 1144, 1181, 1183
BceAI	ACGGC	3 cut(s)	1190, 1338, 1892
BciT130I	CCWGG	4 cut(s)	95, 341, 1603, 1921
BciVI	GTATCC	1 cut(s)	874
BcnI	CCSGG	1 cut(s)	1833
BcoDI	GTCTC	3 cut(s)	365, 1680, 1781
BfaI	CTAG	5 cut(s)	167, 389, 1122, 1253, 1277
BfmI	CTRYAG	5 cut(s)	71, 99, 270, 1470, 1910
BfoI	RGCGCY	1 cut(s)	1609
BfrI	CTTAAG	1 cut(s)	1097
BfuAI	ACCTGC	2 cut(s)	838, 2043
BfuI	GTATCC	1 cut(s)	874
BglII	AGATCT	1 cut(s)	2030
BlpI	GCTNAGC	1 cut(s)	522
BmcAI	AGTACT	2 cut(s)	803, 1007
Bme1390I	CCNGG	5 cut(s)	95, 341, 1603, 1833, 1921
Bme18I	GGWCC	6 cut(s)	155, 602, 1021, 1181, 1598, 1915
BmeT110I	CYCGRG	2 cut(s)	1329, 1840
BmgT120I	GGNCC	8 cut(s)	155, 602, 1021, 1181, 1598, 1829, 1830, 1915
BmrFI	CCNGG	5 cut(s)	95, 341, 1603, 1833, 1921
BmrI	ACTGGG	1 cut(s)	1836
BmsI	GCATC	5 cut(s)	16, 436, 680, 978, 1169
BmtI	GCTAGC	1 cut(s)	1256
BmuI	ACTGGG	1 cut(s)	1836
BpiI	GAAGAC	2 cut(s)	450, 638
BpmI	CTGGAG	2 cut(s)	548, 1942
Bpu10I	CCTNAGC	1 cut(s)	1153
Bpu1102I	GCTNAGC	1 cut(s)	522
BpuEI	CTTGAG	1 cut(s)	1598
BpuMI	CCSGG	1 cut(s)	1833
Bsa29I	ATCGAT	2 cut(s)	1758, 2071
BsaI	GGTCTC	1 cut(s)	1781
BsaJI	CCNNGG	8 cut(s)	93, 258, 868, 933, 1191, 1354, 1601, 1919
BsaWI	WCCGGW	2 cut(s)	157, 1595
BsaXI	ACNNNNNCTCC	2 cut(s)	874, 904
Bsc4I	CCNNNNNNNGG	6 cut(s)	346, 1360, 1462, 1602, 1732, 2097
Bse1I	ACTGG	5 cut(s)	460, 1023, 1594, 1831, 1977
Bse3DI	GCAATG	3 cut(s)	801, 927, 1432
BseBI	CCWGG	4 cut(s)	95, 341, 1603, 1921
BseCI	ATCGAT	2 cut(s)	1758, 2071
BseDI	CCNNGG	8 cut(s)	93, 258, 868, 933, 1191, 1354, 1601, 1919
BseGI	GGATG	6 cut(s)	31, 55, 1232, 1587, 1885, 1977
BseLI	CCNNNNNNNGG	6 cut(s)	346, 1360, 1462, 1602, 1732, 2097
BseMI	GCAATG	3 cut(s)	801, 927, 1432
BseMII	CTCAG	6 cut(s)	360, 426, 480, 1016, 1284, 1814
BseNI	ACTGG	5 cut(s)	460, 1023, 1594, 1831, 1977
BseRI	GAGGAG	1 cut(s)	1728
BseSI	GKGCMC	3 cut(s)	829, 1833, 1972
BseXI	GCAGC	8 cut(s)	76, 91, 185, 696, 992, 1144, 1181, 1183
BsgI	GTGCAG	2 cut(s)	369, 999
Bsh1236I	CGCG	3 cut(s)	1992, 2014, 2027
Bsh1285I	CGRYCG	1 cut(s)	822
BshFI	GGCC	8 cut(s)	303, 705, 851, 1313, 1452, 1831, 1879, 1976
BshNI	GGYRCC	1 cut(s)	1835
BshVI	ATCGAT	2 cut(s)	1758, 2071
BsiEI	CGRYCG	1 cut(s)	822
BsiHKAI	GWGCWC	1 cut(s)	829
BsiHKCI	CYCGRG	2 cut(s)	1329, 1840
BsiSI	CCGG	3 cut(s)	158, 1596, 1833
BslFI	GGGAC	4 cut(s)	68, 1377, 1600, 1685
BslI	CCNNNNNNNGG	6 cut(s)	346, 1360, 1462, 1602, 1732, 2097
BsmAI	GTCTC	3 cut(s)	365, 1680, 1781
BsmBI	CGTCTC	1 cut(s)	365
BsmFI	GGGAC	4 cut(s)	68, 1377, 1600, 1685
BsmI	GAATGC	2 cut(s)	1199, 1562
BsnI	GGCC	8 cut(s)	303, 705, 851, 1313, 1452, 1831, 1879, 1976
Bso31I	GGTCTC	1 cut(s)	1781
BsoBI	CYCGRG	2 cut(s)	1329, 1840
Bsp120I	GGGCCC	1 cut(s)	1829
Bsp1286I	GDGCHC	3 cut(s)	829, 1833, 1972
Bsp143I	GATC	7 cut(s)	109, 734, 819, 937, 1759, 1984, 2030
Bsp1720I	GCTNAGC	1 cut(s)	522
Bsp19I	CCATGG	1 cut(s)	1191
Bsp68I	TCGCGA	1 cut(s)	2014
BspACI	CCGC	6 cut(s)	170, 669, 960, 1902, 1992, 1995
BspANI	GGCC	8 cut(s)	303, 705, 851, 1313, 1452, 1831, 1879, 1976
BspCNI	CTCAG	6 cut(s)	361, 425, 479, 1015, 1285, 1813
BspDI	ATCGAT	2 cut(s)	1758, 2071
BspFNI	CGCG	3 cut(s)	1992, 2014, 2027
BspMAI	CTGCAG	2 cut(s)	75, 1914
BspMI	ACCTGC	2 cut(s)	838, 2043
BspOI	GCTAGC	1 cut(s)	1256
BspPI	GGATC	5 cut(s)	104, 729, 742, 932, 945
BspT107I	GGYRCC	1 cut(s)	1835
BspTI	CTTAAG	1 cut(s)	1097
BspTNI	GGTCTC	1 cut(s)	1781
BsrDI	GCAATG	3 cut(s)	801, 927, 1432
BsrI	ACTGG	5 cut(s)	460, 1023, 1594, 1831, 1977
BssECI	CCNNGG	8 cut(s)	93, 258, 868, 933, 1191, 1354, 1601, 1919
BssMI	GATC	7 cut(s)	109, 734, 819, 937, 1759, 1984, 2030
BssSI	CACGAG	1 cut(s)	2092
BssT1I	CCWWGG	3 cut(s)	933, 1191, 1354
Bst2BI	CACGAG	1 cut(s)	2092
Bst2UI	CCWGG	4 cut(s)	95, 341, 1603, 1921
Bst4CI	ACNGT	4 cut(s)	271, 602, 811, 1795
Bst6I	CTCTTC	2 cut(s)	1031, 1674
BstAFI	CTTAAG	1 cut(s)	1097
BstAPI	GCANNNNNTGC	2 cut(s)	86, 986
BstDEI	CTNAG	9 cut(s)	369, 412, 466, 522, 1002, 1153, 1293, 1800, 2005
BstDSI	CCRYGG	1 cut(s)	1191
BstENI	CCTNNNNNAGG	1 cut(s)	344
BstF5I	GGATG	6 cut(s)	31, 55, 1232, 1587, 1885, 1977
BstFNI	CGCG	3 cut(s)	1992, 2014, 2027
BstH2I	RGCGCY	1 cut(s)	1609
BstHHI	GCGC	4 cut(s)	1608, 1946, 1992, 2027
BstKTI	GATC	7 cut(s)	112, 737, 822, 940, 1762, 1987, 2033
BstMAI	GTCTC	3 cut(s)	365, 1680, 1781
BstMBI	GATC	7 cut(s)	109, 734, 819, 937, 1759, 1984, 2030
BstMCI	CGRYCG	1 cut(s)	822
BstMWI	GCNNNNNNNGC	9 cut(s)	86, 95, 104, 677, 966, 986, 1166, 1268, 1277
BstNI	CCWGG	4 cut(s)	95, 341, 1603, 1921
BstNSI	RCATGY	4 cut(s)	331, 1212, 1284, 1821
BstSCI	CCNGG	5 cut(s)	93, 339, 1601, 1831, 1919
BstSFI	CTRYAG	5 cut(s)	71, 99, 270, 1470, 1910
BstSLI	GKGCMC	3 cut(s)	829, 1833, 1972
BstUI	CGCG	3 cut(s)	1992, 2014, 2027
BstV1I	GCAGC	8 cut(s)	76, 91, 185, 696, 992, 1144, 1181, 1183
BstV2I	GAAGAC	2 cut(s)	450, 638
BstX2I	RGATCY	3 cut(s)	734, 937, 2030
BstYI	RGATCY	3 cut(s)	734, 937, 2030
Bsu15I	ATCGAT	2 cut(s)	1758, 2071
BsuI	GTATCC	1 cut(s)	874
BsuRI	GGCC	8 cut(s)	303, 705, 851, 1313, 1452, 1831, 1879, 1976
BsuTUI	ATCGAT	2 cut(s)	1758, 2071
BtgI	CCRYGG	1 cut(s)	1191
BtsCI	GGATG	6 cut(s)	31, 55, 1232, 1587, 1885, 1977
BtsI	GCAGTG	2 cut(s)	496, 2116
BtsIMutI	CAGTG	6 cut(s)	241, 496, 1016, 1791, 1970, 2116
BtuMI	TCGCGA	1 cut(s)	2014
BveI	ACCTGC	2 cut(s)	838, 2043
CaiI	CAGNNNCTG	1 cut(s)	86
CfoI	GCGC	4 cut(s)	1608, 1946, 1992, 2027
Cfr13I	GGNCC	8 cut(s)	155, 602, 1021, 1181, 1598, 1829, 1830, 1915
ClaI	ATCGAT	2 cut(s)	1758, 2071
CseI	GACGC	1 cut(s)	1869
Csp6I	GTAC	4 cut(s)	657, 802, 1006, 1393
CspCI	CAANNNNNGTGG	2 cut(s)	232, 267
CviQI	GTAC	4 cut(s)	657, 802, 1006, 1393
DdeI	CTNAG	9 cut(s)	369, 412, 466, 522, 1002, 1153, 1293, 1800, 2005
DpnI	GATC	7 cut(s)	111, 736, 821, 939, 1761, 1986, 2032
DpnII	GATC	7 cut(s)	109, 734, 819, 937, 1759, 1984, 2030
DraIII	CACNNNGTG	1 cut(s)	1067
DrdI	GACNNNNNNGTC	1 cut(s)	814
DseDI	GACNNNNNNGTC	1 cut(s)	814
EaeI	YGGCCR	2 cut(s)	849, 1974
Eam1104I	CTCTTC	2 cut(s)	1031, 1674
EarI	CTCTTC	2 cut(s)	1031, 1674
EciI	GGCGGA	1 cut(s)	2010
Eco130I	CCWWGG	3 cut(s)	933, 1191, 1354
Eco147I	AGGCCT	1 cut(s)	303
Eco24I	GRGCYC	1 cut(s)	1833
Eco31I	GGTCTC	1 cut(s)	1781
Eco47I	GGWCC	6 cut(s)	155, 602, 1021, 1181, 1598, 1915
Eco57I	CTGAAG	2 cut(s)	4, 1655
Eco88I	CYCGRG	2 cut(s)	1329, 1840
EcoNI	CCTNNNNNAGG	1 cut(s)	344
EcoO109I	RGGNCCY	1 cut(s)	1915
EcoRI	GAATTC	1 cut(s)	502
EcoRII	CCWGG	4 cut(s)	93, 339, 1601, 1919
EcoT14I	CCWWGG	3 cut(s)	933, 1191, 1354
EcoT38I	GRGCYC	1 cut(s)	1833
ErhI	CCWWGG	3 cut(s)	933, 1191, 1354
Esp3I	CGTCTC	1 cut(s)	365
FalI	AAGNNNNNCTT	2 cut(s)	732, 764
FaqI	GGGAC	4 cut(s)	68, 1377, 1600, 1685
FblI	GTMKAC	1 cut(s)	1892
FokI	GGATG	6 cut(s)	38, 62, 1219, 1594, 1872, 1964
FriOI	GRGCYC	1 cut(s)	1833
FspBI	CTAG	5 cut(s)	167, 389, 1122, 1253, 1277
FspI	TGCGCA	1 cut(s)	1945
GlaI	GCGC	4 cut(s)	1607, 1945, 1991, 2026
GsuI	CTGGAG	2 cut(s)	548, 1942
HaeII	RGCGCY	1 cut(s)	1609
HaeIII	GGCC	8 cut(s)	303, 705, 851, 1313, 1452, 1831, 1879, 1976
HapII	CCGG	3 cut(s)	158, 1596, 1833
HgaI	GACGC	1 cut(s)	1869
HhaI	GCGC	4 cut(s)	1608, 1946, 1992, 2027
Hin6I	GCGC	4 cut(s)	1606, 1944, 1990, 2025
HinP1I	GCGC	4 cut(s)	1606, 1944, 1990, 2025
HincII	GTYRAC	2 cut(s)	1227, 1893
HindII	GTYRAC	2 cut(s)	1227, 1893
HindIII	AAGCTT	1 cut(s)	204
HinfI	GANTC	7 cut(s)	407, 773, 861, 1365, 1407, 1804, 1845
HpaII	CCGG	3 cut(s)	158, 1596, 1833
HphI	GGTGA	5 cut(s)	232, 416, 470, 1141, 1620
Hpy166II	GTNNAC	5 cut(s)	563, 598, 827, 1227, 1893
Hpy188III	TCNNGA	6 cut(s)	1204, 1414, 1763, 1808, 1854, 2013
Hpy8I	GTNNAC	5 cut(s)	563, 598, 827, 1227, 1893
Hpy99I	CGWCG	2 cut(s)	1863, 1894
HpyAV	CCTTC	6 cut(s)	310, 479, 1247, 1505, 2097, 2132
HpyCH4III	ACNGT	4 cut(s)	271, 602, 811, 1795
HpyCH4IV	ACGT	2 cut(s)	993, 2047
HpyF10VI	GCNNNNNNNGC	9 cut(s)	86, 95, 104, 677, 966, 986, 1166, 1268, 1277
HpyF3I	CTNAG	9 cut(s)	369, 412, 466, 522, 1002, 1153, 1293, 1800, 2005
HpySE526I	ACGT	2 cut(s)	993, 2047
HspAI	GCGC	4 cut(s)	1606, 1944, 1990, 2025
Kzo9I	GATC	7 cut(s)	109, 734, 819, 937, 1759, 1984, 2030
LmnI	GCTCC	3 cut(s)	1400, 1741, 1997
Lsp1109I	GCAGC	8 cut(s)	76, 91, 185, 696, 992, 1144, 1181, 1183
LweI	GCATC	5 cut(s)	16, 436, 680, 978, 1169
MaeI	CTAG	5 cut(s)	167, 389, 1122, 1253, 1277
MaeII	ACGT	2 cut(s)	993, 2047
MaeIII	GTNAC	4 cut(s)	238, 1135, 1147, 1654
MalI	GATC	7 cut(s)	111, 736, 821, 939, 1761, 1986, 2032
MboI	GATC	7 cut(s)	109, 734, 819, 937, 1759, 1984, 2030
MflI	RGATCY	3 cut(s)	734, 937, 2030
MhlI	GDGCHC	3 cut(s)	829, 1833, 1972
MlsI	TGGCCA	2 cut(s)	851, 1976
MluCI	AATT	6 cut(s)	308, 435, 502, 921, 1446, 1811
MluNI	TGGCCA	2 cut(s)	851, 1976
MlyI	GAGTC	3 cut(s)	767, 1359, 1798
MmeI	TCCRAC	3 cut(s)	1208, 1360, 1802
Mox20I	TGGCCA	2 cut(s)	851, 1976
MroXI	GAANNNNTTC	2 cut(s)	38, 1668
MscI	TGGCCA	2 cut(s)	851, 1976
MseI	TTAA	9 cut(s)	125, 876, 924, 1031, 1037, 1050, 1071, 1098, 1814
MslI	CAYNNNNRTG	1 cut(s)	908
Msp20I	TGGCCA	2 cut(s)	851, 1976
MspCI	CTTAAG	1 cut(s)	1097
MspI	CCGG	3 cut(s)	158, 1596, 1833
MspR9I	CCNGG	5 cut(s)	95, 341, 1603, 1833, 1921
Mva1269I	GAATGC	2 cut(s)	1199, 1562
MvaI	CCWGG	4 cut(s)	95, 341, 1603, 1921
MvnI	CGCG	3 cut(s)	1992, 2014, 2027
MwoI	GCNNNNNNNGC	9 cut(s)	86, 95, 104, 677, 966, 986, 1166, 1268, 1277
NciI	CCSGG	1 cut(s)	1833
NcoI	CCATGG	1 cut(s)	1191
NdeII	GATC	7 cut(s)	109, 734, 819, 937, 1759, 1984, 2030
NheI	GCTAGC	1 cut(s)	1252
NmeAIII	GCCGAG	1 cut(s)	283
NmuCI	GTSAC	4 cut(s)	238, 1135, 1147, 1654
NruI	TCGCGA	1 cut(s)	2014
NsbI	TGCGCA	1 cut(s)	1945
NspI	RCATGY	4 cut(s)	331, 1212, 1284, 1821
PaqCI	CACCTGC	1 cut(s)	838
PceI	AGGCCT	1 cut(s)	303
PciI	ACATGT	1 cut(s)	1817
PcsI	WCGNNNNNNNCGW	1 cut(s)	2090
PctI	GAATGC	2 cut(s)	1199, 1562
PdmI	GAANNNNTTC	2 cut(s)	38, 1668
PfeI	GAWTC	4 cut(s)	407, 861, 1407, 1845
Ple19I	CGATCG	1 cut(s)	822
PleI	GAGTC	3 cut(s)	767, 1359, 1798
PpsI	GAGTC	3 cut(s)	767, 1359, 1798
PpuMI	RGGWCCY	1 cut(s)	1915
PscI	ACATGT	1 cut(s)	1817
PsiI	TTATAA	1 cut(s)	1442
Psp5II	RGGWCCY	1 cut(s)	1915
Psp6I	CCWGG	4 cut(s)	93, 339, 1601, 1919
PspGI	CCWGG	4 cut(s)	93, 339, 1601, 1919
PspOMI	GGGCCC	1 cut(s)	1829
PspPI	GGNCC	8 cut(s)	155, 602, 1021, 1181, 1598, 1829, 1830, 1915
PspPPI	RGGWCCY	1 cut(s)	1915
PstI	CTGCAG	2 cut(s)	75, 1914
PstNI	CAGNNNCTG	1 cut(s)	86
PsuI	RGATCY	3 cut(s)	734, 937, 2030
PvuI	CGATCG	1 cut(s)	822
RruI	TCGCGA	1 cut(s)	2014
RsaI	GTAC	4 cut(s)	658, 803, 1007, 1394
RsaNI	GTAC	4 cut(s)	657, 802, 1006, 1393
RseI	CAYNNNNRTG	1 cut(s)	908
SalI	GTCGAC	1 cut(s)	1891
SaqAI	TTAA	9 cut(s)	125, 876, 924, 1031, 1037, 1050, 1071, 1098, 1814
Sau3AI	GATC	7 cut(s)	109, 734, 819, 937, 1759, 1984, 2030
Sau96I	GGNCC	8 cut(s)	155, 602, 1021, 1181, 1598, 1829, 1830, 1915
ScaI	AGTACT	2 cut(s)	803, 1007
SchI	GAGTC	3 cut(s)	767, 1359, 1798
ScrFI	CCNGG	5 cut(s)	95, 341, 1603, 1833, 1921
SduI	GDGCHC	3 cut(s)	829, 1833, 1972
SfaNI	GCATC	5 cut(s)	16, 436, 680, 978, 1169
SfcI	CTRYAG	5 cut(s)	71, 99, 270, 1470, 1910
SinI	GGWCC	6 cut(s)	155, 602, 1021, 1181, 1598, 1915
SmiMI	CAYNNNNRTG	1 cut(s)	908
SmlI	CTYRAG	2 cut(s)	1097, 1613
SmoI	CTYRAG	2 cut(s)	1097, 1613
Sse9I	AATT	6 cut(s)	308, 435, 502, 921, 1446, 1811
SseBI	AGGCCT	1 cut(s)	303
SsiI	CCGC	6 cut(s)	170, 669, 960, 1902, 1992, 1995
SspMI	CTAG	5 cut(s)	167, 389, 1122, 1253, 1277
StuI	AGGCCT	1 cut(s)	303
StyD4I	CCNGG	5 cut(s)	93, 339, 1601, 1831, 1919
StyI	CCWWGG	3 cut(s)	933, 1191, 1354
TaaI	ACNGT	4 cut(s)	271, 602, 811, 1795
TaiI	ACGT	2 cut(s)	996, 2050
TaqI	TCGA	9 cut(s)	129, 674, 818, 1415, 1720, 1758, 1892, 1983, 2071
TasI	AATT	6 cut(s)	308, 435, 502, 921, 1446, 1811
TatI	WGTACW	3 cut(s)	801, 1005, 1392
TauI	GCSGC	2 cut(s)	173, 1995
TfiI	GAWTC	4 cut(s)	407, 861, 1407, 1845
Tru1I	TTAA	9 cut(s)	125, 876, 924, 1031, 1037, 1050, 1071, 1098, 1814
Tru9I	TTAA	9 cut(s)	125, 876, 924, 1031, 1037, 1050, 1071, 1098, 1814
TscAI	CASTG	6 cut(s)	241, 496, 1023, 1798, 1977, 2123
TseFI	GTSAC	4 cut(s)	238, 1135, 1147, 1654
TseI	GCWGC	8 cut(s)	89, 104, 173, 709, 980, 1157, 1169, 1196
Tsp45I	GTSAC	4 cut(s)	238, 1135, 1147, 1654
TspDTI	ATGAA	9 cut(s)	130, 296, 411, 456, 498, 656, 812, 1476, 1614
TspGWI	ACGGA	1 cut(s)	1878
TspRI	CASTG	6 cut(s)	241, 496, 1023, 1798, 1977, 2123
Vha464I	CTTAAG	1 cut(s)	1097
VneI	GTGCAC	1 cut(s)	825
VpaK11BI	GGWCC	6 cut(s)	155, 602, 1021, 1181, 1598, 1915
XagI	CCTNNNNNAGG	1 cut(s)	344
XapI	RAATTY	1 cut(s)	502
XceI	RCATGY	4 cut(s)	331, 1212, 1284, 1821
XmiI	GTMKAC	1 cut(s)	1892
XmnI	GAANNNNTTC	2 cut(s)	38, 1668
XspI	CTAG	5 cut(s)	167, 389, 1122, 1253, 1277
ZrmI	AGTACT	2 cut(s)	803, 1007

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.