Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005954.1

Orthogroup ID

OG0002447

Physical Location & Seq

Genomic Coordinates Reverse (-)

93760 .. 102939

Gene Structure 9180 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005954.1_g000026.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1953 bp

atgctggcattcgaggattggcatttagagtggagaagagcacctttgtttattggccaggtggagggaagagtttctataaaagggaagctttgcaattttgctttcaccgaacagagcaccctgtataagggaaaatatttaagtaactattattcaaacataagcatgggagacgagcaagatttgcaaagaccagtgagcttttggaagatgcctgttggtgttttcttcagggatgcaaggagtgttttcaaatgggatgtgcttggtaaggagatacttcagattgcagtccctgctgctctggctgtagctgctgatcctgtggcttccttaatcgacacagcattcattggtcatataggtccagtcgaacttgcagcagcaggagtatctattgccttattcaatcaagcttcaaggattactatattcccacttgtcagtatcaccacctcctttgtggcggaagaagatactgtagcaaaaatgaaaataaaatcaggaaaaggccagaaattggaaaatggttcaggcatgcttgatgatatggaaaaagggattgctaaaccaaaacctgagacgaaagaatctgccctagatgacgaaaatggtgaagccgcagaaatgggtaggcatctgggaaatgatgaagacaaggaaaatggtgagaactcggacaagggactagatgaagacagtgaagtaaagaattccataccggaaaatgctgaggtggaaaatggagaaaaaggtgttcctaaaaacagtgatccagaagaaaatggttccaagacaggtattgtaaacggtccatctgttgttatgagcaaaaataagaagacaaagatgaagaacagaaagcgtactattgcttccgcatcgacagcactcatcttcggtgcaatacttggcctgctgcaagctatatttctcatgttaggatccaaagctcttcttggtgtgatgggtgtgaaacatgactcccccatgctaaaaccagcaatgaagtacttgacagtaaggtcgatcggtgcacctgctgttcttcttacattggccatgcaaggaatcttccgagggtttaaggatactaaaactcctttatatgtcattgttgctggatatgcaattaacattgccttggatccacttctcatcttcgtatgcggtttcggcatcagaggcgcagctattgcacacgttctttctcagtacttgatggcagtggtcctcttcttaatcttaatgagaaaagttaatctcatgccaccaagtattaaagagttgcagttcggaaagtttcttaagaatggttctctattgttggctagggtggttgctgtgacattctgtgtcaccttagctgcatctttggcagcacggctgggtccaactcccatggctgcattccagacatgcttacaagtctggttgacatcatcccttcttgctgatgggctagctgttgcaggacaggctattctagcatgtgcatttgctgagaaagactacaaaaaggctacagctaccgcaactcgggtattacagatgggatttatccttggtgtgggactcgctcttgttgttggagttggtttgtactttggagctggaatcttctcaagagatgtcaatgttttgcaccttataaaaattggcctcccttttgttgcagcaacacaaccaatcaattccctctcttttgtgtttgatggtgtcaactttggagcatctgactttgcatactctgcatattccttggttcttgtggccatagcaagcattgtttcattgttccttctctctaaatccgatggttttgttggaatttggattgctttgaccatctatatggggttgcgtgcattcgctggcgtatggaggatggggactggaaccggaccttggcgctttctcaagggtcgttcatcaccacagccttcataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006820 GO:0006842 GO:0006855 GO:0006873 GO:0006875 GO:0006879 GO:0006950 GO:0006979 GO:0007154 GO:0008150 GO:0008324 GO:0008509 GO:0008514 GO:0009267 GO:0009605 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0015075 GO:0015137 GO:0015142 GO:0015238 GO:0015318 GO:0015711 GO:0015746 GO:0015849 GO:0015893 GO:0016020 GO:0016036 GO:0019725 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0031667 GO:0031668 GO:0031669 GO:0032870 GO:0033554 GO:0033993 GO:0034220 GO:0034599 GO:0034614 GO:0035674 GO:0035690 GO:0042221 GO:0042493 GO:0042592 GO:0042594 GO:0042891 GO:0042895 GO:0044464 GO:0046873 GO:0046916 GO:0046942 GO:0046943 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071369 GO:0071495 GO:0071496 GO:0071702 GO:0071731 GO:0071732 GO:0071944 GO:0097305 GO:0097366 GO:0098655 GO:0098656 GO:0098771 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902170 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

650

Amino Acids

69.83

Weight (kDa)

9.09

Isoelectric Point (pI)

30.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002447)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08040 AT3G08040
fragaria_vesca	FvH4_7g01040 FvH4_7g01040 FvH4_7g01040 FvH4_7g01040 FvH4_7g01040
malus_domestica	MD02G1311900.v1.1 MD07G1010700.v1.1
prunus_persica	Prupe.2G013000_v2.0.a1 Prupe.2G013000_v2.0.a1 Prupe.2G013000_v2.0.a1 Prupe.2G013100_v2.0.a1
pyrus_communis	pycom02g26180 pycom07g00880
rosa_chinensis	RchiOBHm_Chr1g0315981 RchiOBHm_Chr1g0316021
rosa_laevigata	RLG00000030710 RLG00000030716 RLG00000030718
rosa_multiflora	Rmu_sc0002014.1_g000023 Rmu_sc0002531.1_g000056 Rmu_sc0004566.1_g000010 Rmu_sc0005954.1_g000026
rosa_roxburghii	Rroxscaffold_4G00331210 Rroxscaffold_4G00331270
rosa_rugosa	Rorug01G0007300 Rorug01G0007400 Rorug01G0007500 Rorug01G0007600 Rorug01G0008000 Rorug01G0008100
rosa_samantha	Rh1AG018100 Rh1BG011500 Rh1BG012100 Rh1CG015400 Rh1CG015900 Rh1DG011200 Rh1DG012000
rosa_wichuraiana	Rw1G001120 Rw1G001160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1655
AarI	CACCTGC	1 cut(s)	1051
AasI	GACNNNNNNGTC	1 cut(s)	1027
Acc36I	ACCTGC	1 cut(s)	1051
AccB7I	CCANNNNNTGG	1 cut(s)	523
AciI	CCGC	5 cut(s)	470, 624, 882, 1173, 1536
AclWI	GGATC	6 cut(s)	317, 770, 942, 955, 1145, 1158
AcoI	YGGCCR	3 cut(s)	55, 1062, 1776
AcsI	RAATTY	2 cut(s)	715, 1833
AcuI	CTGAAG	2 cut(s)	217, 269
AfaI	GTAC	4 cut(s)	871, 1016, 1220, 1607
AfiI	CCNNNNNNNGG	6 cut(s)	64, 130, 523, 1542, 1573, 1911
AflII	CTTAAG	1 cut(s)	1310
AflIII	ACRYGT	1 cut(s)	1204
AgsI	TTSAA	4 cut(s)	159, 256, 412, 423
AjnI	CCWGG	1 cut(s)	57
AjuI	GAANNNNNNNTTGG	2 cut(s)	1894, 1926
Alw21I	GWGCWC	3 cut(s)	43, 122, 1042
Alw26I	GTCTC	2 cut(s)	168, 578
Alw44I	GTGCAC	1 cut(s)	1038
AlwI	GGATC	6 cut(s)	317, 770, 942, 955, 1145, 1158
AlwNI	CAGNNNCTG	1 cut(s)	299
Ama87I	CYCGRG	1 cut(s)	1542
AoxI	GGCC	6 cut(s)	55, 514, 916, 1062, 1663, 1776
ApaLI	GTGCAC	1 cut(s)	1038
ApoI	RAATTY	2 cut(s)	715, 1833
Asp700I	GAANNNNTTC	1 cut(s)	73
AspLEI	GCGC	2 cut(s)	1193, 1917
AspS9I	GGNCC	5 cut(s)	368, 815, 1234, 1394, 1907
AsuHPI	GGTGA	6 cut(s)	100, 445, 629, 683, 1354, 1929
AsuNHI	GCTAGC	1 cut(s)	1465
AvaI	CYCGRG	1 cut(s)	1542
AvaII	GGWCC	5 cut(s)	368, 815, 1234, 1394, 1907
BaeGI	GKGCMC	1 cut(s)	1042
BalI	TGGCCA	3 cut(s)	57, 1064, 1778
BamHI	GGATCC	2 cut(s)	947, 1150
BarI	GAAGNNNNNNTAC	2 cut(s)	862, 894
BbsI	GAAGAC	3 cut(s)	663, 705, 851
Bbv12I	GWGCWC	3 cut(s)	43, 122, 1042
BbvCI	CCTCAGC	1 cut(s)	735
BccI	CCATC	9 cut(s)	826, 964, 1219, 1454, 1549, 1712, 1814, 1859, 1885
BceAI	ACGGC	1 cut(s)	1403
BciT130I	CCWGG	1 cut(s)	59
BciVI	GTATCC	1 cut(s)	1087
BcoDI	GTCTC	2 cut(s)	168, 578
BfaI	CTAG	5 cut(s)	602, 692, 1335, 1466, 1490
BfmI	CTRYAG	3 cut(s)	312, 483, 1527
BfoI	RGCGCY	1 cut(s)	1918
BfrI	CTTAAG	1 cut(s)	1310
BfuAI	ACCTGC	1 cut(s)	1051
BfuI	GTATCC	1 cut(s)	1087
BmcAI	AGTACT	2 cut(s)	1016, 1220
Bme1390I	CCNGG	1 cut(s)	59
Bme18I	GGWCC	5 cut(s)	368, 815, 1234, 1394, 1907
BmeT110I	CYCGRG	1 cut(s)	1542
BmgT120I	GGNCC	5 cut(s)	368, 815, 1234, 1394, 1907
BmiI	GGNNCC	5 cut(s)	793, 949, 1152, 1395, 1903
BmrFI	CCNGG	1 cut(s)	59
BmsI	GCATC	7 cut(s)	204, 229, 649, 893, 1191, 1382, 1745
BmtI	GCTAGC	1 cut(s)	1469
BpiI	GAAGAC	3 cut(s)	663, 705, 851
Bpu10I	CCTNAGC	2 cut(s)	735, 1366
BpuEI	CTTGAG	2 cut(s)	1612, 1907
BsaJI	CCNNGG	6 cut(s)	1081, 1146, 1404, 1567, 1764, 1910
BsaWI	WCCGGW	2 cut(s)	724, 1904
BsaXI	ACNNNNNCTCC	2 cut(s)	1087, 1117
Bsc4I	CCNNNNNNNGG	6 cut(s)	64, 130, 523, 1542, 1573, 1911
Bse1I	ACTGG	3 cut(s)	197, 371, 1903
Bse3DI	GCAATG	2 cut(s)	1014, 1140
BseBI	CCWGG	1 cut(s)	59
BseDI	CCNNGG	6 cut(s)	1081, 1146, 1404, 1567, 1764, 1910
BseGI	GGATG	4 cut(s)	244, 268, 1445, 1896
BseLI	CCNNNNNNNGG	6 cut(s)	64, 130, 523, 1542, 1573, 1911
BseMI	GCAATG	2 cut(s)	1014, 1140
BseMII	CTCAG	4 cut(s)	573, 726, 1229, 1497
BseNI	ACTGG	3 cut(s)	197, 371, 1903
BseSI	GKGCMC	1 cut(s)	1042
BseYI	CCCAGC	1 cut(s)	1390
Bsh1285I	CGRYCG	1 cut(s)	1035
BshFI	GGCC	6 cut(s)	57, 516, 918, 1064, 1665, 1778
BsiEI	CGRYCG	1 cut(s)	1035
BsiHKAI	GWGCWC	3 cut(s)	43, 122, 1042
BsiHKCI	CYCGRG	1 cut(s)	1542
BsiSI	CCGG	2 cut(s)	725, 1905
BslFI	GGGAC	4 cut(s)	281, 702, 1590, 1909
BslI	CCNNNNNNNGG	6 cut(s)	64, 130, 523, 1542, 1573, 1911
BsmAI	GTCTC	2 cut(s)	168, 578
BsmBI	CGTCTC	2 cut(s)	168, 578
BsmFI	GGGAC	4 cut(s)	281, 702, 1590, 1909
BsmI	GAATGC	4 cut(s)	8, 350, 1412, 1871
BsnI	GGCC	6 cut(s)	57, 516, 918, 1064, 1665, 1778
BsoBI	CYCGRG	1 cut(s)	1542
Bsp1286I	GDGCHC	3 cut(s)	43, 122, 1042
Bsp143I	GATC	5 cut(s)	322, 775, 947, 1032, 1150
Bsp19I	CCATGG	1 cut(s)	1404
BspACI	CCGC	5 cut(s)	470, 624, 882, 1173, 1536
BspANI	GGCC	6 cut(s)	57, 516, 918, 1064, 1665, 1778
BspCNI	CTCAG	4 cut(s)	574, 727, 1228, 1498
BspLI	GGNNCC	5 cut(s)	793, 949, 1152, 1395, 1903
BspMI	ACCTGC	1 cut(s)	1051
BspOI	GCTAGC	1 cut(s)	1469
BspPI	GGATC	6 cut(s)	317, 770, 942, 955, 1145, 1158
BspQI	GCTCTTC	2 cut(s)	31, 963
BspTI	CTTAAG	1 cut(s)	1310
BsrDI	GCAATG	2 cut(s)	1014, 1140
BsrI	ACTGG	3 cut(s)	197, 371, 1903
BssECI	CCNNGG	6 cut(s)	1081, 1146, 1404, 1567, 1764, 1910
BssMI	GATC	5 cut(s)	322, 775, 947, 1032, 1150
BssT1I	CCWWGG	5 cut(s)	1146, 1404, 1567, 1764, 1910
Bst2UI	CCWGG	1 cut(s)	59
Bst4CI	ACNGT	5 cut(s)	484, 704, 773, 815, 1024
Bst6I	CTCTTC	4 cut(s)	31, 64, 963, 1244
BstAFI	CTTAAG	1 cut(s)	1310
BstAPI	GCANNNNNTGC	4 cut(s)	187, 299, 1199, 1754
BstC8I	GCNNGC	8 cut(s)	6, 542, 920, 927, 1467, 1786, 1869, 1879
BstDEI	CTNAG	5 cut(s)	582, 735, 1215, 1366, 1506
BstDSI	CCRYGG	1 cut(s)	1404
BstENI	CCTNNNNNAGG	1 cut(s)	128
BstF5I	GGATG	4 cut(s)	244, 268, 1445, 1896
BstH2I	RGCGCY	1 cut(s)	1918
BstHHI	GCGC	2 cut(s)	1193, 1917
BstKTI	GATC	5 cut(s)	325, 778, 950, 1035, 1153
BstMAI	GTCTC	2 cut(s)	168, 578
BstMBI	GATC	5 cut(s)	322, 775, 947, 1032, 1150
BstMCI	CGRYCG	1 cut(s)	1035
BstNI	CCWGG	1 cut(s)	59
BstNSI	RCATGY	3 cut(s)	544, 1425, 1497
BstSCI	CCNGG	1 cut(s)	57
BstSFI	CTRYAG	3 cut(s)	312, 483, 1527
BstSLI	GKGCMC	1 cut(s)	1042
BstV2I	GAAGAC	3 cut(s)	663, 705, 851
BstX2I	RGATCY	2 cut(s)	947, 1150
BstXI	CCANNNNNNTGG	1 cut(s)	1858
BstYI	RGATCY	2 cut(s)	947, 1150
BsuI	GTATCC	1 cut(s)	1087
BsuRI	GGCC	6 cut(s)	57, 516, 918, 1064, 1665, 1778
BtgI	CCRYGG	1 cut(s)	1404
BtsCI	GGATG	4 cut(s)	244, 268, 1445, 1896
BtsI	GCAGTG	1 cut(s)	1236
BtsIMutI	CAGTG	4 cut(s)	204, 709, 778, 1236
BveI	ACCTGC	1 cut(s)	1051
Cac8I	GCNNGC	8 cut(s)	6, 542, 920, 927, 1467, 1786, 1869, 1879
CaiI	CAGNNNCTG	1 cut(s)	299
CfoI	GCGC	2 cut(s)	1193, 1917
Cfr13I	GGNCC	5 cut(s)	368, 815, 1234, 1394, 1907
Csp6I	GTAC	4 cut(s)	870, 1015, 1219, 1606
CspCI	CAANNNNNGTGG	2 cut(s)	445, 480
CviQI	GTAC	4 cut(s)	870, 1015, 1219, 1606
DdeI	CTNAG	5 cut(s)	582, 735, 1215, 1366, 1506
DpnI	GATC	5 cut(s)	324, 777, 949, 1034, 1152
DpnII	GATC	5 cut(s)	322, 775, 947, 1032, 1150
DrdI	GACNNNNNNGTC	1 cut(s)	1027
DseDI	GACNNNNNNGTC	1 cut(s)	1027
EaeI	YGGCCR	3 cut(s)	55, 1062, 1776
Eam1104I	CTCTTC	4 cut(s)	31, 64, 963, 1244
EarI	CTCTTC	4 cut(s)	31, 64, 963, 1244
EciI	GGCGGA	1 cut(s)	485
Eco130I	CCWWGG	5 cut(s)	1146, 1404, 1567, 1764, 1910
Eco47I	GGWCC	5 cut(s)	368, 815, 1234, 1394, 1907
Eco57I	CTGAAG	2 cut(s)	217, 269
Eco88I	CYCGRG	1 cut(s)	1542
EcoNI	CCTNNNNNAGG	1 cut(s)	128
EcoRI	GAATTC	1 cut(s)	715
EcoRII	CCWGG	1 cut(s)	57
EcoT14I	CCWWGG	5 cut(s)	1146, 1404, 1567, 1764, 1910
ErhI	CCWWGG	5 cut(s)	1146, 1404, 1567, 1764, 1910
Esp3I	CGTCTC	2 cut(s)	168, 578
FalI	AAGNNNNNCTT	6 cut(s)	28, 60, 75, 107, 945, 977
FaqI	GGGAC	4 cut(s)	281, 702, 1590, 1909
FokI	GGATG	4 cut(s)	251, 275, 1432, 1903
FspBI	CTAG	5 cut(s)	602, 692, 1335, 1466, 1490
GlaI	GCGC	2 cut(s)	1192, 1916
GsaI	CCCAGC	1 cut(s)	1394
HaeII	RGCGCY	1 cut(s)	1918
HaeIII	GGCC	6 cut(s)	57, 516, 918, 1064, 1665, 1778
HapII	CCGG	2 cut(s)	725, 1905
HhaI	GCGC	2 cut(s)	1193, 1917
Hin6I	GCGC	2 cut(s)	1191, 1915
HinP1I	GCGC	2 cut(s)	1191, 1915
HincII	GTYRAC	2 cut(s)	1440, 1726
HindII	GTYRAC	2 cut(s)	1440, 1726
HindIII	AAGCTT	2 cut(s)	89, 417
HinfI	GANTC	5 cut(s)	593, 986, 1074, 1578, 1620
HpaII	CCGG	2 cut(s)	725, 1905
HphI	GGTGA	6 cut(s)	100, 445, 629, 683, 1354, 1929
Hpy166II	GTNNAC	4 cut(s)	811, 1040, 1440, 1726
Hpy188I	TCNGA	7 cut(s)	288, 682, 1082, 1187, 1301, 1741, 1819
Hpy188III	TCNNGA	4 cut(s)	507, 779, 1417, 1629
Hpy8I	GTNNAC	4 cut(s)	811, 1040, 1440, 1726
HpyAV	CCTTC	2 cut(s)	1460, 1814
HpyCH4III	ACNGT	5 cut(s)	484, 704, 773, 815, 1024
HpyCH4IV	ACGT	1 cut(s)	1206
HpyF3I	CTNAG	5 cut(s)	582, 735, 1215, 1366, 1506
HpySE526I	ACGT	1 cut(s)	1206
HspAI	GCGC	2 cut(s)	1191, 1915
Kzo9I	GATC	5 cut(s)	322, 775, 947, 1032, 1150
LguI	GCTCTTC	2 cut(s)	31, 963
LmnI	GCTCC	2 cut(s)	1613, 1733
LweI	GCATC	7 cut(s)	204, 229, 649, 893, 1191, 1382, 1745
MaeI	CTAG	5 cut(s)	602, 692, 1335, 1466, 1490
MaeII	ACGT	1 cut(s)	1206
MaeIII	GTNAC	3 cut(s)	146, 1348, 1360
MalI	GATC	5 cut(s)	324, 777, 949, 1034, 1152
MboI	GATC	5 cut(s)	322, 775, 947, 1032, 1150
MflI	RGATCY	2 cut(s)	947, 1150
MhlI	GDGCHC	3 cut(s)	43, 122, 1042
MlsI	TGGCCA	3 cut(s)	57, 1064, 1778
MluCI	AATT	7 cut(s)	97, 521, 715, 1134, 1659, 1696, 1833
MluNI	TGGCCA	3 cut(s)	57, 1064, 1778
MlyI	GAGTC	2 cut(s)	980, 1572
MmeI	TCCRAC	3 cut(s)	1421, 1573, 1810
Mox20I	TGGCCA	3 cut(s)	57, 1064, 1778
MroXI	GAANNNNTTC	1 cut(s)	73
MscI	TGGCCA	3 cut(s)	57, 1064, 1778
MseI	TTAA	9 cut(s)	143, 338, 1089, 1137, 1244, 1250, 1263, 1284, 1311
MslI	CAYNNNNRTG	2 cut(s)	167, 1856
Msp20I	TGGCCA	3 cut(s)	57, 1064, 1778
MspCI	CTTAAG	1 cut(s)	1310
MspI	CCGG	2 cut(s)	725, 1905
MspR9I	CCNGG	1 cut(s)	59
Mva1269I	GAATGC	4 cut(s)	8, 350, 1412, 1871
MvaI	CCWGG	1 cut(s)	59
NcoI	CCATGG	1 cut(s)	1404
NdeII	GATC	5 cut(s)	322, 775, 947, 1032, 1150
NheI	GCTAGC	1 cut(s)	1465
NlaIV	GGNNCC	5 cut(s)	793, 949, 1152, 1395, 1903
NmuCI	GTSAC	2 cut(s)	1348, 1360
NspI	RCATGY	3 cut(s)	544, 1425, 1497
PaeI	GCATGC	1 cut(s)	544
PaqCI	CACCTGC	1 cut(s)	1051
PciSI	GCTCTTC	2 cut(s)	31, 963
PctI	GAATGC	4 cut(s)	8, 350, 1412, 1871
PdmI	GAANNNNTTC	1 cut(s)	73
PfeI	GAWTC	3 cut(s)	593, 1074, 1620
PflMI	CCANNNNNTGG	1 cut(s)	523
Ple19I	CGATCG	1 cut(s)	1035
PleI	GAGTC	2 cut(s)	980, 1572
PpsI	GAGTC	2 cut(s)	980, 1572
PsiI	TTATAA	1 cut(s)	1655
Psp6I	CCWGG	1 cut(s)	57
PspFI	CCCAGC	1 cut(s)	1390
PspGI	CCWGG	1 cut(s)	57
PspN4I	GGNNCC	5 cut(s)	793, 949, 1152, 1395, 1903
PspPI	GGNCC	5 cut(s)	368, 815, 1234, 1394, 1907
PstNI	CAGNNNCTG	1 cut(s)	299
PsuI	RGATCY	2 cut(s)	947, 1150
PvuI	CGATCG	1 cut(s)	1035
RsaI	GTAC	4 cut(s)	871, 1016, 1220, 1607
RsaNI	GTAC	4 cut(s)	870, 1015, 1219, 1606
RseI	CAYNNNNRTG	2 cut(s)	167, 1856
SapI	GCTCTTC	2 cut(s)	31, 963
SaqAI	TTAA	9 cut(s)	143, 338, 1089, 1137, 1244, 1250, 1263, 1284, 1311
Sau3AI	GATC	5 cut(s)	322, 775, 947, 1032, 1150
Sau96I	GGNCC	5 cut(s)	368, 815, 1234, 1394, 1907
ScaI	AGTACT	2 cut(s)	1016, 1220
SchI	GAGTC	2 cut(s)	980, 1572
ScrFI	CCNGG	1 cut(s)	59
SduI	GDGCHC	3 cut(s)	43, 122, 1042
SfaNI	GCATC	7 cut(s)	204, 229, 649, 893, 1191, 1382, 1745
SfcI	CTRYAG	3 cut(s)	312, 483, 1527
SinI	GGWCC	5 cut(s)	368, 815, 1234, 1394, 1907
SmiMI	CAYNNNNRTG	2 cut(s)	167, 1856
SmlI	CTYRAG	3 cut(s)	1310, 1627, 1922
SmoI	CTYRAG	3 cut(s)	1310, 1627, 1922
SphI	GCATGC	1 cut(s)	544
Sse9I	AATT	7 cut(s)	97, 521, 715, 1134, 1659, 1696, 1833
SsiI	CCGC	5 cut(s)	470, 624, 882, 1173, 1536
SspI	AATATT	1 cut(s)	140
SspMI	CTAG	5 cut(s)	602, 692, 1335, 1466, 1490
StyD4I	CCNGG	1 cut(s)	57
StyI	CCWWGG	5 cut(s)	1146, 1404, 1567, 1764, 1910
TaaI	ACNGT	5 cut(s)	484, 704, 773, 815, 1024
TaiI	ACGT	1 cut(s)	1209
TaqI	TCGA	5 cut(s)	12, 342, 375, 887, 1031
TasI	AATT	7 cut(s)	97, 521, 715, 1134, 1659, 1696, 1833
TatI	WGTACW	3 cut(s)	1014, 1218, 1605
TauI	GCSGC	1 cut(s)	626
TfiI	GAWTC	3 cut(s)	593, 1074, 1620
Tru1I	TTAA	9 cut(s)	143, 338, 1089, 1137, 1244, 1250, 1263, 1284, 1311
Tru9I	TTAA	9 cut(s)	143, 338, 1089, 1137, 1244, 1250, 1263, 1284, 1311
TscAI	CASTG	4 cut(s)	204, 709, 778, 1236
TseFI	GTSAC	2 cut(s)	1348, 1360
Tsp45I	GTSAC	2 cut(s)	1348, 1360
TspDTI	ATGAA	9 cut(s)	343, 509, 669, 711, 869, 1025, 1785, 1923, 1938
TspRI	CASTG	4 cut(s)	204, 709, 778, 1236
Van91I	CCANNNNNTGG	1 cut(s)	523
Vha464I	CTTAAG	1 cut(s)	1310
VneI	GTGCAC	1 cut(s)	1038
VpaK11BI	GGWCC	5 cut(s)	368, 815, 1234, 1394, 1907
XagI	CCTNNNNNAGG	1 cut(s)	128
XapI	RAATTY	2 cut(s)	715, 1833
XceI	RCATGY	3 cut(s)	544, 1425, 1497
XcmI	CCANNNNNNNNNTGG	2 cut(s)	204, 463
XmnI	GAANNNNTTC	1 cut(s)	73
XspI	CTAG	5 cut(s)	602, 692, 1335, 1466, 1490
ZrmI	AGTACT	2 cut(s)	1016, 1220

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.