Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002919

Physical Location & Seq

Genomic Coordinates Reverse (-)

3610147 .. 3612639

Gene Structure 2493 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G11470.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 903 bp

ATGAGAATCAGAGTCATGTCTCAATTGCAGCGAAGCTTATCGATCGAATTGCCTTCACTGGTTCCTCTGCAACTTCCATCTCGGATGGAGACTCATCTATGGTTTATTCGACCAGATGAAGTGAAGAGTACATCTCTTCTAAAACACTACTCTCAACTTCTGTCACCAACCGAGAAAGAGAAAGTTCTTCAGATGCGAGGCGATGAGCTTAAGAAGAATGCTTTGCTTGCTCGAACCTTGGTTCGGACCACCATTGCTAGATATCAGACAAACAATGAAGTCGATCCTAAGGCCTTGATGTTCAAGAAGAATATGTATGGGAAGCCTGAGGTAGATTGGCAGAATTATACGAACTGTAATAATCCACCATTGCATTTCAACATTTCTCACACAGATTCATTAATTGCCTGTGGGGTGACTGTACACGTTCCGGTTGGTATCGATGTTGAAGACAAGGAAAGGAAGATTAAACATGATATCTTAGCATTTGCAGAAAGATTTTACTCTGCTGATGAAGTCAAGTTTTTGTCAACTTTACCGGACCCTGAAGTTCAGAGAAAGGAATTTATTAAGTTATGGACCCTAAAGGAGGCATATGTGAAAGCATTAGGAAAAGGCTTTTCTGCTGCACCTTTTAATACCTTCACAATCCAGTCCAAGGTTGGAACAAAAGGAGAATACAATCTTTGCAAGATGACTGAAATGACTGCAAGTTCGCTGGAGGAGACAAACAAATGCGATGGAGAATGGAAGTTTTCCCTTTTGGAGTTGGATGATTCTCATTATGCTGCAATCTGTATTGAAGATGATGAAGCTAGTGGAGGAGCTCCTATGAGGGTGATTGTCCGAAAAACCATCCCGTTTGTAGAAGATGAACTTATATCTGAAAGCAAACTTCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00770 map00770

Pfam Domains

Protein Families

ACPS

Protein Analysis

300

Amino Acids

34.29

Weight (kDa)

6.42

Isoelectric Point (pI)

40.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AASDHPPT_N	PF22624	47 - 136	1.5e-08	4'-phosphopantetheinyl transferase, N-terminal
ACPS	PF01648	144 - 228	8.1e-17	4'-phosphopantetheinyl transferase superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002919)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02765 AT2G02765 AT2G02765 AT2G02765 AT3G11470 AT3G11470 AT3G11470 AT3G11470 AT3G11470 AT3G11470 AT3G11470 AT3G11470 AT3G11470
fragaria_vesca	FvH4_4g11630 FvH4_6g19140 FvH4_6g19140 FvH4_6g19140 FvH4_6g19140 FvH4_6g19140 FvH4_6g19140 FvH4_6g19140 FvH4_6g19140 FvH4_6g19140
malus_domestica	MD12G1027200.v1.1 MD14G1027400.v1.1
prunus_persica	Prupe.7G104300_v2.0.a1 Prupe.7G104300_v2.0.a1 Prupe.7G104300_v2.0.a1 Prupe.7G104300_v2.0.a1
pyrus_communis	pycom12g02610
rosa_chinensis	RchiOBHm_Chr3g0474251
rosa_rugosa	Rorug03G0139700 Rorug03G0139700
rosa_samantha	Rh3AG190300 Rh3BG219400 Rh3CG214700 Rh3DG214900
rosa_wichuraiana	Rw3G017360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AclWI	GGATC	1 cut(s)	278
AcsI	RAATTY	1 cut(s)	563
AcuI	CTGAAG	2 cut(s)	173, 567
AfaI	GTAC	2 cut(s)	130, 423
AfiI	CCNNNNNNNGG	3 cut(s)	243, 589, 658
AflII	CTTAAG	1 cut(s)	209
AflIII	ACRYGT	1 cut(s)	424
AgsI	TTSAA	4 cut(s)	304, 379, 449, 803
AluBI	AGCT	4 cut(s)	36, 208, 815, 827
AluI	AGCT	4 cut(s)	36, 208, 815, 827
Alw21I	GWGCWC	1 cut(s)	829
Alw26I	GTCTC	3 cut(s)	24, 83, 719
AlwI	GGATC	1 cut(s)	278
AoxI	GGCC	1 cut(s)	291
ApeKI	GCWGC	3 cut(s)	28, 626, 788
ApoI	RAATTY	1 cut(s)	563
ArsI	GACNNNNNNTTYG	2 cut(s)	697, 729
AseI	ATTAAT	1 cut(s)	401
AspS9I	GGNCC	3 cut(s)	246, 541, 579
AsuHPI	GGTGA	3 cut(s)	156, 427, 850
AvaII	GGWCC	3 cut(s)	246, 541, 579
AxyI	CCTNAGG	2 cut(s)	288, 327
BanII	GRGCYC	1 cut(s)	829
BbsI	GAAGAC	1 cut(s)	456
Bbv12I	GWGCWC	1 cut(s)	829
BbvI	GCAGC	3 cut(s)	40, 613, 775
BccI	CCATC	4 cut(s)	79, 85, 734, 863
BcgI	CGANNNNNNTGC	2 cut(s)	31, 65
BcoDI	GTCTC	3 cut(s)	24, 83, 719
BfaI	CTAG	2 cut(s)	258, 816
BfrI	CTTAAG	1 cut(s)	209
BisI	GCNGC	3 cut(s)	29, 627, 789
BlsI	GCNGC	3 cut(s)	30, 628, 790
Bme18I	GGWCC	3 cut(s)	246, 541, 579
BmgT120I	GGNCC	3 cut(s)	246, 541, 579
BmiI	GGNNCC	3 cut(s)	63, 543, 581
BmsI	GCATC	1 cut(s)	183
BpiI	GAAGAC	1 cut(s)	456
BplI	GAGNNNNNCTC	2 cut(s)	118, 150
BpmI	CTGGAG	1 cut(s)	740
Bsa29I	ATCGAT	2 cut(s)	41, 441
BsaJI	CCNNGG	2 cut(s)	237, 657
BsaWI	WCCGGW	2 cut(s)	430, 538
Bsc4I	CCNNNNNNNGG	3 cut(s)	243, 589, 658
Bse1I	ACTGG	2 cut(s)	63, 652
Bse21I	CCTNAGG	2 cut(s)	288, 327
Bse3DI	GCAATG	2 cut(s)	252, 368
BseCI	ATCGAT	2 cut(s)	41, 441
BseDI	CCNNGG	2 cut(s)	237, 657
BseGI	GGATG	3 cut(s)	90, 778, 855
BseLI	CCNNNNNNNGG	3 cut(s)	243, 589, 658
BseMI	GCAATG	2 cut(s)	252, 368
BseMII	CTCAG	1 cut(s)	318
BseNI	ACTGG	2 cut(s)	63, 652
BseRI	GAGGAG	2 cut(s)	737, 837
BseXI	GCAGC	3 cut(s)	40, 613, 775
BsgI	GTGCAG	1 cut(s)	612
Bsh1285I	CGRYCG	1 cut(s)	45
BshFI	GGCC	1 cut(s)	293
BshVI	ATCGAT	2 cut(s)	41, 441
BsiEI	CGRYCG	1 cut(s)	45
BsiHKAI	GWGCWC	1 cut(s)	829
BsiSI	CCGG	2 cut(s)	431, 539
BslI	CCNNNNNNNGG	3 cut(s)	243, 589, 658
BsmAI	GTCTC	3 cut(s)	24, 83, 719
BsmI	GAATGC	1 cut(s)	223
BsnI	GGCC	1 cut(s)	293
Bsp1286I	GDGCHC	1 cut(s)	829
Bsp1407I	TGTACA	1 cut(s)	421
Bsp143I	GATC	2 cut(s)	42, 283
BspANI	GGCC	1 cut(s)	293
BspCNI	CTCAG	1 cut(s)	319
BspDI	ATCGAT	2 cut(s)	41, 441
BspLI	GGNNCC	3 cut(s)	63, 543, 581
BspPI	GGATC	1 cut(s)	278
BspTI	CTTAAG	1 cut(s)	209
BsrDI	GCAATG	2 cut(s)	252, 368
BsrGI	TGTACA	1 cut(s)	421
BsrI	ACTGG	2 cut(s)	63, 652
BssECI	CCNNGG	2 cut(s)	237, 657
BssMI	GATC	2 cut(s)	42, 283
BssT1I	CCWWGG	2 cut(s)	237, 657
Bst4CI	ACNGT	2 cut(s)	356, 421
Bst6I	CTCTTC	2 cut(s)	119, 141
BstAFI	CTTAAG	1 cut(s)	209
BstAUI	TGTACA	1 cut(s)	421
BstC8I	GCNNGC	1 cut(s)	228
BstDEI	CTNAG	3 cut(s)	288, 327, 481
BstENI	CCTNNNNNAGG	1 cut(s)	587
BstF5I	GGATG	3 cut(s)	90, 778, 855
BstKTI	GATC	2 cut(s)	45, 286
BstMAI	GTCTC	3 cut(s)	24, 83, 719
BstMBI	GATC	2 cut(s)	42, 283
BstMCI	CGRYCG	1 cut(s)	45
BstMWI	GCNNNNNNNGC	1 cut(s)	227
BstV1I	GCAGC	3 cut(s)	40, 613, 775
BstV2I	GAAGAC	1 cut(s)	456
Bsu15I	ATCGAT	2 cut(s)	41, 441
Bsu36I	CCTNAGG	2 cut(s)	288, 327
BsuRI	GGCC	1 cut(s)	293
BsuTUI	ATCGAT	2 cut(s)	41, 441
BtgZI	GCGATG	2 cut(s)	216, 753
BtsCI	GGATG	3 cut(s)	90, 778, 855
BtsIMutI	CAGTG	1 cut(s)	56
Cac8I	GCNNGC	1 cut(s)	228
Cfr13I	GGNCC	3 cut(s)	246, 541, 579
ClaI	ATCGAT	2 cut(s)	41, 441
Csp6I	GTAC	2 cut(s)	129, 422
CviAII	CATG	2 cut(s)	16, 473
CviJI	RGCY	7 cut(s)	36, 208, 293, 325, 618, 815, 827
CviKI_1	RGCY	7 cut(s)	36, 208, 293, 325, 618, 815, 827
CviQI	GTAC	2 cut(s)	129, 422
DdeI	CTNAG	3 cut(s)	288, 327, 481
DpnI	GATC	2 cut(s)	44, 285
DpnII	GATC	2 cut(s)	42, 283
Eam1104I	CTCTTC	2 cut(s)	119, 141
EarI	CTCTTC	2 cut(s)	119, 141
Ecl136II	GAGCTC	1 cut(s)	827
Eco130I	CCWWGG	2 cut(s)	237, 657
Eco147I	AGGCCT	1 cut(s)	293
Eco24I	GRGCYC	1 cut(s)	829
Eco32I	GATATC	2 cut(s)	263, 478
Eco47I	GGWCC	3 cut(s)	246, 541, 579
Eco53kI	GAGCTC	1 cut(s)	827
Eco57I	CTGAAG	2 cut(s)	173, 567
Eco81I	CCTNAGG	2 cut(s)	288, 327
EcoICRI	GAGCTC	1 cut(s)	827
EcoNI	CCTNNNNNAGG	1 cut(s)	587
EcoRV	GATATC	2 cut(s)	263, 478
EcoT14I	CCWWGG	2 cut(s)	237, 657
EcoT38I	GRGCYC	1 cut(s)	829
ErhI	CCWWGG	2 cut(s)	237, 657
FaeI	CATG	2 cut(s)	19, 476
FalI	AAGNNNNNCTT	2 cut(s)	861, 893
FatI	CATG	2 cut(s)	15, 472
FauNDI	CATATG	1 cut(s)	595
Fnu4HI	GCNGC	3 cut(s)	29, 627, 789
FokI	GGATG	3 cut(s)	97, 785, 842
FriOI	GRGCYC	1 cut(s)	829
Fsp4HI	GCNGC	3 cut(s)	29, 627, 789
FspBI	CTAG	2 cut(s)	258, 816
GluI	GCNGC	3 cut(s)	29, 627, 789
GsuI	CTGGAG	1 cut(s)	740
HaeIII	GGCC	1 cut(s)	293
HapII	CCGG	2 cut(s)	431, 539
Hin1II	CATG	2 cut(s)	19, 476
HincII	GTYRAC	1 cut(s)	531
HindII	GTYRAC	1 cut(s)	531
HindIII	AAGCTT	1 cut(s)	34
HinfI	GANTC	5 cut(s)	6, 12, 91, 395, 776
HpaII	CCGG	2 cut(s)	431, 539
HphI	GGTGA	3 cut(s)	156, 427, 850
Hpy166II	GTNNAC	2 cut(s)	424, 531
Hpy188I	TCNGA	8 cut(s)	11, 84, 192, 246, 267, 555, 848, 886
Hpy188III	TCNNGA	1 cut(s)	304
Hpy8I	GTNNAC	2 cut(s)	424, 531
HpyAV	CCTTC	2 cut(s)	63, 652
HpyCH4III	ACNGT	2 cut(s)	356, 421
HpyCH4IV	ACGT	1 cut(s)	426
HpyCH4V	TGCA	8 cut(s)	28, 70, 373, 491, 629, 690, 710, 791
HpyF10VI	GCNNNNNNNGC	1 cut(s)	227
HpyF3I	CTNAG	3 cut(s)	288, 327, 481
HpySE526I	ACGT	1 cut(s)	426
Hsp92II	CATG	2 cut(s)	19, 476
Kzo9I	GATC	2 cut(s)	42, 283
LmnI	GCTCC	2 cut(s)	824, 832
LpnPI	CCDG	9 cut(s)	44, 126, 339, 421, 444, 552, 558, 665, 704
Lsp1109I	GCAGC	3 cut(s)	40, 613, 775
LweI	GCATC	1 cut(s)	183
MaeI	CTAG	2 cut(s)	258, 816
MaeII	ACGT	1 cut(s)	426
MaeIII	GTNAC	2 cut(s)	162, 415
MalI	GATC	2 cut(s)	44, 285
MboI	GATC	2 cut(s)	42, 283
MboII	GAAGA	9 cut(s)	128, 136, 179, 226, 319, 461, 475, 815, 881
MfeI	CAATTG	1 cut(s)	23
MhlI	GDGCHC	1 cut(s)	829
MluCI	AATT	5 cut(s)	23, 47, 343, 402, 563
MlyI	GAGTC	2 cut(s)	21, 85
MmeI	TCCRAC	2 cut(s)	643, 750
MnlI	CCTC	7 cut(s)	75, 191, 322, 583, 715, 815, 828
MseI	TTAA	5 cut(s)	210, 401, 468, 570, 636
MspCI	CTTAAG	1 cut(s)	209
MspI	CCGG	2 cut(s)	431, 539
MunI	CAATTG	1 cut(s)	23
Mva1269I	GAATGC	1 cut(s)	223
MwoI	GCNNNNNNNGC	1 cut(s)	227
NdeI	CATATG	1 cut(s)	595
NdeII	GATC	2 cut(s)	42, 283
NlaIII	CATG	2 cut(s)	19, 476
NlaIV	GGNNCC	3 cut(s)	63, 543, 581
NmuCI	GTSAC	2 cut(s)	162, 415
PceI	AGGCCT	1 cut(s)	293
PctI	GAATGC	1 cut(s)	223
PfeI	GAWTC	3 cut(s)	6, 395, 776
PkrI	GCNGC	3 cut(s)	30, 628, 790
Ple19I	CGATCG	1 cut(s)	45
PleI	GAGTC	2 cut(s)	20, 85
PpsI	GAGTC	2 cut(s)	20, 85
PshBI	ATTAAT	1 cut(s)	401
Psp124BI	GAGCTC	1 cut(s)	829
PspN4I	GGNNCC	3 cut(s)	63, 543, 581
PspPI	GGNCC	3 cut(s)	246, 541, 579
PvuI	CGATCG	1 cut(s)	45
RsaI	GTAC	2 cut(s)	130, 423
RsaNI	GTAC	2 cut(s)	129, 422
SacI	GAGCTC	1 cut(s)	829
SaqAI	TTAA	5 cut(s)	210, 401, 468, 570, 636
SatI	GCNGC	3 cut(s)	29, 627, 789
Sau3AI	GATC	2 cut(s)	42, 283
Sau96I	GGNCC	3 cut(s)	246, 541, 579
SchI	GAGTC	2 cut(s)	21, 85
SduI	GDGCHC	1 cut(s)	829
SfaNI	GCATC	1 cut(s)	183
SinI	GGWCC	3 cut(s)	246, 541, 579
SmlI	CTYRAG	1 cut(s)	209
SmoI	CTYRAG	1 cut(s)	209
Sse9I	AATT	5 cut(s)	23, 47, 343, 402, 563
SseBI	AGGCCT	1 cut(s)	293
SspMI	CTAG	2 cut(s)	258, 816
SstI	GAGCTC	1 cut(s)	829
StuI	AGGCCT	1 cut(s)	293
StyI	CCWWGG	2 cut(s)	237, 657
TaaI	ACNGT	2 cut(s)	356, 421
TaiI	ACGT	1 cut(s)	429
TaqI	TCGA	6 cut(s)	41, 45, 109, 232, 282, 441
TasI	AATT	5 cut(s)	23, 47, 343, 402, 563
TatI	WGTACW	2 cut(s)	128, 421
TfiI	GAWTC	3 cut(s)	6, 395, 776
Tru1I	TTAA	5 cut(s)	210, 401, 468, 570, 636
Tru9I	TTAA	5 cut(s)	210, 401, 468, 570, 636
TscAI	CASTG	1 cut(s)	63
TseFI	GTSAC	2 cut(s)	162, 415
TseI	GCWGC	3 cut(s)	28, 626, 788
Tsp45I	GTSAC	2 cut(s)	162, 415
TspDTI	ATGAA	6 cut(s)	132, 291, 387, 528, 825, 888
TspRI	CASTG	1 cut(s)	63
Vha464I	CTTAAG	1 cut(s)	209
VpaK11BI	GGWCC	3 cut(s)	246, 541, 579
VspI	ATTAAT	1 cut(s)	401
XagI	CCTNNNNNAGG	1 cut(s)	587
XapI	RAATTY	1 cut(s)	563
XcmI	CCANNNNNNNNNTGG	1 cut(s)	659
XspI	CTAG	2 cut(s)	258, 816

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.