Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002919

Physical Location & Seq

Genomic Coordinates Forward (+)

13360459 .. 13363267

Gene Structure 2809 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G104300.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 987 bp

ATGTTTTTATTCAGACGCAGAGCGTTTTTGAGAATGAATATTCATGGCCTCCATAACAATTTTTGCTCTGCTCATTCACCTCTGCTACCAGTTCAACTTCCATCTCGAATAAATGATGGGTTTTGTAGGGAAAGTCATTTGTGGTATGTTTTACCTGAGGAGGTGAAGAGTGAAAGCCTTTTGAATCGGTACTCTGAGCTTTTGTCACCGTCTGAGAAAGACAATGTTTTGGGTATGCGTGGAGAGGAGCTCAAGAAAAGAGCCTTGCTTGCCCGGGCATTGGTTCGGACTACCATTTCTAGATATACAAACCATCGAGTAGATCCAAGATCCTTAAAGTTTAAAAAGAACAATCATGGGAAGCCTGAGGTAGAGTGGCAAATTGCAGATGACTGGCAGCCACCACCATTGCATTTCAACATCTCACACACGTCTTCCTTGATAGCTTGTGGAGTAACTGTGGATTCACCAATTGGTATAGATGTGGAAGATAAGCAACGGAAGTTGAAGAACCATATCTTAGCTTTTGCTCGACGGTACTTTTCTTCTCATGAAGTGGAACATTTAACTTCTATTTCGGACATTGAAATTCAGCGTCAACAGTTTATAAAATTATGGACTCTCAAGGAGGCATATGTGAAAGCATTGGGGAAGGGCTTCTCTTCTGCACCGTTTAAGACCTTTACCATTCGAGTGAGGGATGCAGCTAAGAGAGGCCTTCATCTTTCTGGGGACATAGATTCTGAGATATCTGAAATAAGTGTTGAGTCTCTTGGCCCCGTGAACCTCACAACCAATTGGCAATTTGCGCTTCTAGAGTTGGCTGGCTCTCATTATGCTGCCATTTGCATGGAAAAACATAAAGCCGTTGGAGAGAAAGGAAATGCTCCCATGAAATTGACAGTGCGGAGAACGATTCCATTTGTTGAAGATGAATGTGTTACAGGAACTGATGCGGTTTTACCAATAGGCGGATTGAATTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00770 map00770

Pfam Domains

Protein Families

ACPS

Protein Analysis

329

Amino Acids

37.19

Weight (kDa)

9.06

Isoelectric Point (pI)

50.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002919)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02765 AT2G02765 AT2G02765 AT2G02765 AT3G11470 AT3G11470 AT3G11470 AT3G11470 AT3G11470 AT3G11470 AT3G11470 AT3G11470 AT3G11470
fragaria_vesca	FvH4_4g11630 FvH4_6g19140 FvH4_6g19140 FvH4_6g19140 FvH4_6g19140 FvH4_6g19140 FvH4_6g19140 FvH4_6g19140 FvH4_6g19140 FvH4_6g19140
malus_domestica	MD12G1027200.v1.1 MD14G1027400.v1.1
prunus_persica	Prupe.7G104300_v2.0.a1 Prupe.7G104300_v2.0.a1 Prupe.7G104300_v2.0.a1 Prupe.7G104300_v2.0.a1
pyrus_communis	pycom12g02610
rosa_chinensis	RchiOBHm_Chr3g0474251
rosa_rugosa	Rorug03G0139700 Rorug03G0139700
rosa_samantha	Rh3AG190300 Rh3BG219400 Rh3CG214700 Rh3DG214900
rosa_wichuraiana	Rw3G017360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	608
AciI	CCGC	3 cut(s)	907, 956, 972
AclWI	GGATC	2 cut(s)	317, 324
AcsI	RAATTY	1 cut(s)	588
AfaI	GTAC	2 cut(s)	191, 539
AfiI	CCNNNNNNNGG	2 cut(s)	280, 971
AflIII	ACRYGT	1 cut(s)	429
AgsI	TTSAA	7 cut(s)	95, 184, 418, 508, 587, 929, 979
AjiI	CACGTC	1 cut(s)	432
AluBI	AGCT	5 cut(s)	199, 250, 446, 524, 707
AluI	AGCT	5 cut(s)	199, 250, 446, 524, 707
Alw21I	GWGCWC	1 cut(s)	252
Alw26I	GTCTC	1 cut(s)	774
AlwI	GGATC	2 cut(s)	317, 324
AlwNI	CAGNNNCTG	1 cut(s)	950
Ama87I	CYCGRG	1 cut(s)	273
AoxI	GGCC	3 cut(s)	46, 715, 775
ApeKI	GCWGC	3 cut(s)	397, 704, 839
ApoI	RAATTY	1 cut(s)	588
Asp700I	GAANNNNTTC	1 cut(s)	656
AspLEI	GCGC	1 cut(s)	811
AspS9I	GGNCC	1 cut(s)	776
AsuC2I	CCSGG	2 cut(s)	274, 275
AsuHPI	GGTGA	4 cut(s)	69, 175, 198, 459
AvaI	CYCGRG	1 cut(s)	273
AxyI	CCTNAGG	2 cut(s)	156, 366
BanII	GRGCYC	1 cut(s)	252
BbsI	GAAGAC	1 cut(s)	426
Bbv12I	GWGCWC	1 cut(s)	252
BbvI	GCAGC	3 cut(s)	409, 716, 826
BccI	CCATC	3 cut(s)	109, 110, 321
BceAI	ACGGC	1 cut(s)	851
BcnI	CCSGG	2 cut(s)	274, 275
BcoDI	GTCTC	1 cut(s)	774
BfaI	CTAG	2 cut(s)	300, 815
BisI	GCNGC	3 cut(s)	398, 705, 840
BlsI	GCNGC	3 cut(s)	399, 706, 841
Bme1390I	CCNGG	2 cut(s)	274, 275
BmeT110I	CYCGRG	1 cut(s)	273
BmgBI	CACGTC	1 cut(s)	432
BmgT120I	GGNCC	1 cut(s)	776
BmiI	GGNNCC	1 cut(s)	778
BmrFI	CCNGG	2 cut(s)	274, 275
BmsI	GCATC	2 cut(s)	691, 943
BpiI	GAAGAC	1 cut(s)	426
BplI	GAGNNNNNCTC	2 cut(s)	234, 266
BpuEI	CTTGAG	2 cut(s)	236, 608
BpuMI	CCSGG	2 cut(s)	274, 275
BsaJI	CCNNGG	1 cut(s)	273
BsaXI	ACNNNNNCTCC	2 cut(s)	444, 474
Bsc4I	CCNNNNNNNGG	2 cut(s)	280, 971
Bse1I	ACTGG	2 cut(s)	89, 398
Bse21I	CCTNAGG	2 cut(s)	156, 366
Bse3DI	GCAATG	1 cut(s)	407
BseDI	CCNNGG	1 cut(s)	273
BseGI	GGATG	1 cut(s)	706
BseLI	CCNNNNNNNGG	2 cut(s)	280, 971
BseMI	GCAATG	1 cut(s)	407
BseMII	CTCAG	5 cut(s)	147, 186, 204, 357, 735
BseNI	ACTGG	2 cut(s)	89, 398
BseRI	GAGGAG	2 cut(s)	173, 260
BseXI	GCAGC	3 cut(s)	409, 716, 826
BsgI	GTGCAG	1 cut(s)	651
BshFI	GGCC	3 cut(s)	48, 717, 777
BsiHKAI	GWGCWC	1 cut(s)	252
BsiHKCI	CYCGRG	1 cut(s)	273
BsiSI	CCGG	1 cut(s)	274
BslFI	GGGAC	1 cut(s)	746
BslI	CCNNNNNNNGG	2 cut(s)	280, 971
BsmAI	GTCTC	1 cut(s)	774
BsmFI	GGGAC	1 cut(s)	746
BsnI	GGCC	3 cut(s)	48, 717, 777
BsoBI	CYCGRG	1 cut(s)	273
Bsp1286I	GDGCHC	1 cut(s)	252
Bsp143I	GATC	2 cut(s)	322, 329
BspACI	CCGC	3 cut(s)	907, 956, 972
BspANI	GGCC	3 cut(s)	48, 717, 777
BspCNI	CTCAG	5 cut(s)	148, 187, 205, 358, 736
BspHI	TCATGA	1 cut(s)	550
BspLI	GGNNCC	1 cut(s)	778
BspPI	GGATC	2 cut(s)	317, 324
BsrDI	GCAATG	1 cut(s)	407
BsrI	ACTGG	2 cut(s)	89, 398
BssECI	CCNNGG	1 cut(s)	273
BssMI	GATC	2 cut(s)	322, 329
Bst4CI	ACNGT	6 cut(s)	210, 460, 537, 603, 672, 904
Bst6I	CTCTTC	2 cut(s)	161, 667
BstC8I	GCNNGC	2 cut(s)	270, 826
BstDEI	CTNAG	7 cut(s)	156, 195, 213, 366, 520, 708, 744
BstF5I	GGATG	1 cut(s)	706
BstHHI	GCGC	1 cut(s)	811
BstKTI	GATC	2 cut(s)	325, 332
BstMAI	GTCTC	1 cut(s)	774
BstMBI	GATC	2 cut(s)	322, 329
BstMWI	GCNNNNNNNGC	2 cut(s)	269, 808
BstSCI	CCNGG	2 cut(s)	272, 273
BstV1I	GCAGC	3 cut(s)	409, 716, 826
BstV2I	GAAGAC	1 cut(s)	426
BstX2I	RGATCY	2 cut(s)	322, 329
BstXI	CCANNNNNNTGG	1 cut(s)	850
BstYI	RGATCY	2 cut(s)	322, 329
Bsu36I	CCTNAGG	2 cut(s)	156, 366
BsuRI	GGCC	3 cut(s)	48, 717, 777
BtrI	CACGTC	1 cut(s)	432
BtsCI	GGATG	1 cut(s)	706
BtsIMutI	CAGTG	1 cut(s)	909
Cac8I	GCNNGC	2 cut(s)	270, 826
CaiI	CAGNNNCTG	1 cut(s)	950
CciI	TCATGA	1 cut(s)	550
CfoI	GCGC	1 cut(s)	811
Cfr13I	GGNCC	1 cut(s)	776
Cfr9I	CCCGGG	1 cut(s)	273
CseI	GACGC	2 cut(s)	24, 584
Csp6I	GTAC	2 cut(s)	190, 538
CspCI	CAANNNNNGTGG	2 cut(s)	390, 425
CviAII	CATG	5 cut(s)	44, 356, 551, 850, 892
CviQI	GTAC	2 cut(s)	190, 538
DdeI	CTNAG	7 cut(s)	156, 195, 213, 366, 520, 708, 744
DpnI	GATC	2 cut(s)	324, 331
DpnII	GATC	2 cut(s)	322, 329
DraI	TTTAAA	1 cut(s)	343
Eam1104I	CTCTTC	2 cut(s)	161, 667
EarI	CTCTTC	2 cut(s)	161, 667
EciI	GGCGGA	1 cut(s)	987
Ecl136II	GAGCTC	1 cut(s)	250
Eco147I	AGGCCT	1 cut(s)	717
Eco24I	GRGCYC	1 cut(s)	252
Eco32I	GATATC	1 cut(s)	750
Eco53kI	GAGCTC	1 cut(s)	250
Eco81I	CCTNAGG	2 cut(s)	156, 366
Eco88I	CYCGRG	1 cut(s)	273
EcoICRI	GAGCTC	1 cut(s)	250
EcoRV	GATATC	1 cut(s)	750
EcoT38I	GRGCYC	1 cut(s)	252
FaeI	CATG	5 cut(s)	47, 359, 554, 853, 895
FaqI	GGGAC	1 cut(s)	746
FatI	CATG	5 cut(s)	43, 355, 550, 849, 891
FauNDI	CATATG	1 cut(s)	634
Fnu4HI	GCNGC	3 cut(s)	398, 705, 840
FokI	GGATG	1 cut(s)	713
FriOI	GRGCYC	1 cut(s)	252
Fsp4HI	GCNGC	3 cut(s)	398, 705, 840
FspBI	CTAG	2 cut(s)	300, 815
GlaI	GCGC	1 cut(s)	810
GluI	GCNGC	3 cut(s)	398, 705, 840
HaeIII	GGCC	3 cut(s)	48, 717, 777
HapII	CCGG	1 cut(s)	274
HgaI	GACGC	2 cut(s)	24, 584
HhaI	GCGC	1 cut(s)	811
Hin1II	CATG	5 cut(s)	47, 359, 554, 853, 895
Hin6I	GCGC	1 cut(s)	809
HinP1I	GCGC	1 cut(s)	809
HincII	GTYRAC	1 cut(s)	599
HindII	GTYRAC	1 cut(s)	599
HinfI	GANTC	6 cut(s)	184, 464, 619, 740, 767, 916
HpaII	CCGG	1 cut(s)	274
HphI	GGTGA	4 cut(s)	69, 175, 198, 459
Hpy166II	GTNNAC	2 cut(s)	599, 784
Hpy188I	TCNGA	7 cut(s)	14, 196, 214, 288, 580, 745, 754
Hpy188III	TCNNGA	5 cut(s)	105, 253, 300, 551, 815
Hpy8I	GTNNAC	2 cut(s)	599, 784
Hpy99I	CGWCG	1 cut(s)	537
HpyAV	CCTTC	2 cut(s)	646, 728
HpyCH4III	ACNGT	6 cut(s)	210, 460, 537, 603, 672, 904
HpyCH4IV	ACGT	1 cut(s)	431
HpyCH4V	TGCA	5 cut(s)	386, 412, 668, 704, 849
HpyF10VI	GCNNNNNNNGC	2 cut(s)	269, 808
HpyF3I	CTNAG	7 cut(s)	156, 195, 213, 366, 520, 708, 744
HpySE526I	ACGT	1 cut(s)	431
Hsp92II	CATG	5 cut(s)	47, 359, 554, 853, 895
HspAI	GCGC	1 cut(s)	809
Kzo9I	GATC	2 cut(s)	322, 329
LmnI	GCTCC	2 cut(s)	247, 892
LpnPI	CCDG	8 cut(s)	102, 168, 287, 378, 379, 714, 810, 930
Lsp1109I	GCAGC	3 cut(s)	409, 716, 826
LweI	GCATC	2 cut(s)	691, 943
MaeI	CTAG	2 cut(s)	300, 815
MaeII	ACGT	1 cut(s)	431
MaeIII	GTNAC	3 cut(s)	204, 454, 940
MalI	GATC	2 cut(s)	324, 331
MboI	GATC	2 cut(s)	322, 329
MboII	GAAGA	7 cut(s)	178, 426, 500, 520, 537, 654, 941
MfeI	CAATTG	2 cut(s)	471, 796
MflI	RGATCY	2 cut(s)	322, 329
MhlI	GDGCHC	1 cut(s)	252
MluCI	AATT	9 cut(s)	58, 381, 471, 588, 611, 796, 803, 896, 979
MlyI	GAGTC	2 cut(s)	613, 776
MmeI	TCCRAC	1 cut(s)	850
MroXI	GAANNNNTTC	1 cut(s)	656
MseI	TTAA	4 cut(s)	335, 342, 566, 675
MslI	CAYNNNNRTG	2 cut(s)	692, 848
MspI	CCGG	1 cut(s)	274
MspR9I	CCNGG	2 cut(s)	274, 275
MunI	CAATTG	2 cut(s)	471, 796
MwoI	GCNNNNNNNGC	2 cut(s)	269, 808
NciI	CCSGG	2 cut(s)	274, 275
NdeI	CATATG	1 cut(s)	634
NdeII	GATC	2 cut(s)	322, 329
NlaIII	CATG	5 cut(s)	47, 359, 554, 853, 895
NlaIV	GGNNCC	1 cut(s)	778
NmuCI	GTSAC	1 cut(s)	204
PagI	TCATGA	1 cut(s)	550
PceI	AGGCCT	1 cut(s)	717
PdmI	GAANNNNTTC	1 cut(s)	656
PfeI	GAWTC	4 cut(s)	184, 464, 740, 916
PkrI	GCNGC	3 cut(s)	399, 706, 841
PleI	GAGTC	2 cut(s)	613, 775
PpsI	GAGTC	2 cut(s)	613, 775
PsiI	TTATAA	1 cut(s)	608
Psp124BI	GAGCTC	1 cut(s)	252
PspN4I	GGNNCC	1 cut(s)	778
PspPI	GGNCC	1 cut(s)	776
PstNI	CAGNNNCTG	1 cut(s)	950
PsuI	RGATCY	2 cut(s)	322, 329
RsaI	GTAC	2 cut(s)	191, 539
RsaNI	GTAC	2 cut(s)	190, 538
RseI	CAYNNNNRTG	2 cut(s)	692, 848
SacI	GAGCTC	1 cut(s)	252
SaqAI	TTAA	4 cut(s)	335, 342, 566, 675
SatI	GCNGC	3 cut(s)	398, 705, 840
Sau3AI	GATC	2 cut(s)	322, 329
Sau96I	GGNCC	1 cut(s)	776
SchI	GAGTC	2 cut(s)	613, 776
ScrFI	CCNGG	2 cut(s)	274, 275
SduI	GDGCHC	1 cut(s)	252
SfaNI	GCATC	2 cut(s)	691, 943
SmaI	CCCGGG	1 cut(s)	275
SmiMI	CAYNNNNRTG	2 cut(s)	692, 848
SmlI	CTYRAG	2 cut(s)	251, 623
SmoI	CTYRAG	2 cut(s)	251, 623
SrfI	GCCCGGGC	1 cut(s)	275
Sse9I	AATT	9 cut(s)	58, 381, 471, 588, 611, 796, 803, 896, 979
SseBI	AGGCCT	1 cut(s)	717
SsiI	CCGC	3 cut(s)	907, 956, 972
SspI	AATATT	1 cut(s)	40
SspMI	CTAG	2 cut(s)	300, 815
SstI	GAGCTC	1 cut(s)	252
StuI	AGGCCT	1 cut(s)	717
StyD4I	CCNGG	2 cut(s)	272, 273
TaaI	ACNGT	6 cut(s)	210, 460, 537, 603, 672, 904
TaiI	ACGT	1 cut(s)	434
TaqI	TCGA	4 cut(s)	106, 316, 532, 691
TasI	AATT	9 cut(s)	58, 381, 471, 588, 611, 796, 803, 896, 979
TfiI	GAWTC	4 cut(s)	184, 464, 740, 916
Tru1I	TTAA	4 cut(s)	335, 342, 566, 675
Tru9I	TTAA	4 cut(s)	335, 342, 566, 675
TscAI	CASTG	1 cut(s)	909
TseFI	GTSAC	1 cut(s)	204
TseI	GCWGC	3 cut(s)	397, 704, 839
Tsp45I	GTSAC	1 cut(s)	204
TspDTI	ATGAA	6 cut(s)	32, 50, 567, 710, 908, 948
TspGWI	ACGGA	1 cut(s)	514
TspMI	CCCGGG	1 cut(s)	273
TspRI	CASTG	1 cut(s)	909
XapI	RAATTY	1 cut(s)	588
XbaI	TCTAGA	2 cut(s)	299, 814
XmaI	CCCGGG	1 cut(s)	273
XmnI	GAANNNNTTC	1 cut(s)	656
XspI	CTAG	2 cut(s)	300, 815

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.