Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0002919

Physical Location & Seq

Genomic Coordinates Reverse (-)

2477896 .. 2479001

Gene Structure 1106 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1027400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 495 bp

ATGACTGTTTGTGTTGTTTATCAGACAAACCATCGAGTTGATCCGAGATCCTTAAACTTTAAAAAGAACAGTCATGGGAAGCCTGAGGTAGAGTGGCAATTTGCTGATGGCTGGCAGCCACCACCACCATTGCATTTCAACCTCTCGCACACTTCTTCCTTGATAGCTTGTGGAGTAACTGTGGATTCTCTGATTGGCATAGATGTGGAAGATAAGCAACGGAAGTTGAAGAACGAAATTTTAGCTTTTGCTCGACGGTACTTTTCTTCTCATGAAGAGGCATATGTGAAAGCATTGGGAAAGGGCTTCTCTGCTTCACCGTTTAAGACCTTCACCATTCGATTCAGGGATGCAGCTAAGGGAGGCGTCGATTCATCTGGGGATGTAAATTCTGAGATATCCGAAATCAGTGTTGAACCTCACGAGAAATTGGCAATTTTCGCTTCTAGAGTTGGCCGGCTCTCATTATGCTGCGATTTGCATGGAAAGACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00770 map00770

Pfam Domains

Protein Families

ACPS

Protein Analysis

165

Amino Acids

18.25

Weight (kDa)

8.36

Isoelectric Point (pI)

32.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002919)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02765 AT2G02765 AT2G02765 AT2G02765 AT3G11470 AT3G11470 AT3G11470 AT3G11470 AT3G11470 AT3G11470 AT3G11470 AT3G11470 AT3G11470
fragaria_vesca	FvH4_4g11630 FvH4_6g19140 FvH4_6g19140 FvH4_6g19140 FvH4_6g19140 FvH4_6g19140 FvH4_6g19140 FvH4_6g19140 FvH4_6g19140 FvH4_6g19140
malus_domestica	MD12G1027200.v1.1 MD14G1027400.v1.1
prunus_persica	Prupe.7G104300_v2.0.a1 Prupe.7G104300_v2.0.a1 Prupe.7G104300_v2.0.a1 Prupe.7G104300_v2.0.a1
pyrus_communis	pycom12g02610
rosa_chinensis	RchiOBHm_Chr3g0474251
rosa_rugosa	Rorug03G0139700 Rorug03G0139700
rosa_samantha	Rh3AG190300 Rh3BG219400 Rh3CG214700 Rh3DG214900
rosa_wichuraiana	Rw3G017360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AclWI	GGATC	2 cut(s)	35, 42
AcoI	YGGCCR	1 cut(s)	454
AcsI	RAATTY	2 cut(s)	237, 388
AcyI	GRCGYC	1 cut(s)	366
AfaI	GTAC	1 cut(s)	260
AgsI	TTSAA	3 cut(s)	139, 229, 416
AluBI	AGCT	3 cut(s)	167, 245, 356
AluI	AGCT	3 cut(s)	167, 245, 356
AlwI	GGATC	2 cut(s)	35, 42
AoxI	GGCC	1 cut(s)	454
ApeKI	GCWGC	3 cut(s)	115, 353, 471
ApoI	RAATTY	2 cut(s)	237, 388
AsuHPI	GGTGA	2 cut(s)	309, 325
AxyI	CCTNAGG	1 cut(s)	84
BauI	CACGAG	1 cut(s)	422
BbvI	GCAGC	3 cut(s)	127, 365, 458
BccI	CCATC	2 cut(s)	39, 101
BfaI	CTAG	1 cut(s)	447
BisI	GCNGC	3 cut(s)	116, 354, 472
BlsI	GCNGC	3 cut(s)	117, 355, 473
BmsI	GCATC	1 cut(s)	340
Bpu10I	CCTNAGC	1 cut(s)	357
BsaHI	GRCGYC	1 cut(s)	366
BsaXI	ACNNNNNCTCC	2 cut(s)	165, 195
Bse118I	RCCGGY	1 cut(s)	456
Bse21I	CCTNAGG	1 cut(s)	84
Bse3DI	GCAATG	1 cut(s)	128
BseGI	GGATG	2 cut(s)	355, 388
BseMI	GCAATG	1 cut(s)	128
BseMII	CTCAG	2 cut(s)	75, 384
BseXI	GCAGC	3 cut(s)	127, 365, 458
BshFI	GGCC	1 cut(s)	456
BsiSI	CCGG	1 cut(s)	457
BsnI	GGCC	1 cut(s)	456
Bsp143I	GATC	2 cut(s)	40, 47
BspANI	GGCC	1 cut(s)	456
BspCNI	CTCAG	2 cut(s)	76, 385
BspHI	TCATGA	1 cut(s)	271
BspPI	GGATC	2 cut(s)	35, 42
BsrDI	GCAATG	1 cut(s)	128
BsrFI	RCCGGY	1 cut(s)	456
BssAI	RCCGGY	1 cut(s)	456
BssMI	GATC	2 cut(s)	40, 47
BssNI	GRCGYC	1 cut(s)	366
BssSI	CACGAG	1 cut(s)	422
Bst2BI	CACGAG	1 cut(s)	422
Bst4CI	ACNGT	5 cut(s)	7, 71, 181, 258, 321
Bst6I	CTCTTC	1 cut(s)	270
BstACI	GRCGYC	1 cut(s)	366
BstC8I	GCNNGC	2 cut(s)	113, 458
BstDEI	CTNAG	3 cut(s)	84, 357, 393
BstF5I	GGATG	2 cut(s)	355, 388
BstKTI	GATC	2 cut(s)	43, 50
BstMBI	GATC	2 cut(s)	40, 47
BstMWI	GCNNNNNNNGC	1 cut(s)	440
BstV1I	GCAGC	3 cut(s)	127, 365, 458
BstX2I	RGATCY	1 cut(s)	47
BstYI	RGATCY	1 cut(s)	47
Bsu36I	CCTNAGG	1 cut(s)	84
BsuRI	GGCC	1 cut(s)	456
BtsCI	GGATG	2 cut(s)	355, 388
BtsIMutI	CAGTG	1 cut(s)	415
Cac8I	GCNNGC	2 cut(s)	113, 458
CciI	TCATGA	1 cut(s)	271
Cfr10I	RCCGGY	1 cut(s)	456
CseI	GACGC	1 cut(s)	355
Csp6I	GTAC	1 cut(s)	259
CspCI	CAANNNNNGTGG	2 cut(s)	111, 146
CviAII	CATG	3 cut(s)	74, 272, 482
CviJI	RGCY	9 cut(s)	82, 111, 118, 167, 245, 306, 356, 456, 460
CviKI_1	RGCY	9 cut(s)	82, 111, 118, 167, 245, 306, 356, 456, 460
CviQI	GTAC	1 cut(s)	259
DdeI	CTNAG	3 cut(s)	84, 357, 393
DpnI	GATC	2 cut(s)	42, 49
DpnII	GATC	2 cut(s)	40, 47
DraI	TTTAAA	1 cut(s)	61
EaeI	YGGCCR	1 cut(s)	454
Eam1104I	CTCTTC	1 cut(s)	270
EarI	CTCTTC	1 cut(s)	270
Eco32I	GATATC	1 cut(s)	399
Eco81I	CCTNAGG	1 cut(s)	84
EcoRV	GATATC	1 cut(s)	399
FaeI	CATG	3 cut(s)	77, 275, 485
FaiI	YATR	8 cut(s)	75, 200, 273, 283, 285, 469, 483, 493
FatI	CATG	3 cut(s)	73, 271, 481
FauNDI	CATATG	1 cut(s)	283
Fnu4HI	GCNGC	3 cut(s)	116, 354, 472
FokI	GGATG	2 cut(s)	362, 395
Fsp4HI	GCNGC	3 cut(s)	116, 354, 472
FspBI	CTAG	1 cut(s)	447
GluI	GCNGC	3 cut(s)	116, 354, 472
HaeIII	GGCC	1 cut(s)	456
HapII	CCGG	1 cut(s)	457
HgaI	GACGC	1 cut(s)	355
Hin1I	GRCGYC	1 cut(s)	366
Hin1II	CATG	3 cut(s)	77, 275, 485
HinfI	GANTC	3 cut(s)	185, 342, 371
HpaII	CCGG	1 cut(s)	457
HphI	GGTGA	2 cut(s)	309, 325
Hpy188I	TCNGA	5 cut(s)	24, 45, 192, 394, 403
Hpy188III	TCNNGA	3 cut(s)	272, 422, 447
Hpy99I	CGWCG	2 cut(s)	258, 371
HpyAV	CCTTC	1 cut(s)	340
HpyCH4III	ACNGT	5 cut(s)	7, 71, 181, 258, 321
HpyCH4V	TGCA	3 cut(s)	133, 353, 481
HpyF10VI	GCNNNNNNNGC	1 cut(s)	440
HpyF3I	CTNAG	3 cut(s)	84, 357, 393
Hsp92I	GRCGYC	1 cut(s)	366
Hsp92II	CATG	3 cut(s)	77, 275, 485
KroI	GCCGGC	1 cut(s)	456
KroNI	GCCGGC	1 cut(s)	458
Kzo9I	GATC	2 cut(s)	40, 47
LpnPI	CCDG	5 cut(s)	96, 97, 331, 363, 470
Lsp1109I	GCAGC	3 cut(s)	127, 365, 458
LweI	GCATC	1 cut(s)	340
MaeI	CTAG	1 cut(s)	447
MaeIII	GTNAC	1 cut(s)	175
MalI	GATC	2 cut(s)	42, 49
MboI	GATC	2 cut(s)	40, 47
MboII	GAAGA	5 cut(s)	147, 221, 241, 258, 287
MflI	RGATCY	1 cut(s)	47
MluCI	AATT	5 cut(s)	98, 237, 388, 428, 435
MnlI	CCTC	5 cut(s)	79, 152, 271, 356, 429
MroNI	GCCGGC	1 cut(s)	456
MseI	TTAA	3 cut(s)	53, 60, 324
MslI	CAYNNNNRTG	1 cut(s)	203
MspI	CCGG	1 cut(s)	457
MwoI	GCNNNNNNNGC	1 cut(s)	440
NaeI	GCCGGC	1 cut(s)	458
NdeI	CATATG	1 cut(s)	283
NdeII	GATC	2 cut(s)	40, 47
NgoMIV	GCCGGC	1 cut(s)	456
NlaIII	CATG	3 cut(s)	77, 275, 485
PagI	TCATGA	1 cut(s)	271
PdiI	GCCGGC	1 cut(s)	458
PfeI	GAWTC	3 cut(s)	185, 342, 371
PkrI	GCNGC	3 cut(s)	117, 355, 473
PsuI	RGATCY	1 cut(s)	47
RsaI	GTAC	1 cut(s)	260
RsaNI	GTAC	1 cut(s)	259
RseI	CAYNNNNRTG	1 cut(s)	203
SaqAI	TTAA	3 cut(s)	53, 60, 324
SatI	GCNGC	3 cut(s)	116, 354, 472
Sau3AI	GATC	2 cut(s)	40, 47
SetI	ASST	7 cut(s)	90, 144, 169, 247, 332, 358, 421
SfaNI	GCATC	1 cut(s)	340
SmiMI	CAYNNNNRTG	1 cut(s)	203
Sse9I	AATT	5 cut(s)	98, 237, 388, 428, 435
SspMI	CTAG	1 cut(s)	447
TaaI	ACNGT	5 cut(s)	7, 71, 181, 258, 321
TaqI	TCGA	4 cut(s)	34, 253, 340, 369
TasI	AATT	5 cut(s)	98, 237, 388, 428, 435
TfiI	GAWTC	3 cut(s)	185, 342, 371
Tru1I	TTAA	3 cut(s)	53, 60, 324
Tru9I	TTAA	3 cut(s)	53, 60, 324
TscAI	CASTG	1 cut(s)	415
TseI	GCWGC	3 cut(s)	115, 353, 471
TspDTI	ATGAA	2 cut(s)	288, 363
TspGWI	ACGGA	1 cut(s)	235
TspRI	CASTG	1 cut(s)	415
XapI	RAATTY	2 cut(s)	237, 388
XbaI	TCTAGA	1 cut(s)	446
XspI	CTAG	1 cut(s)	447

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.