AT3G11750

Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0007343
Physical Location & Seq
Reverse (-)
3714762 .. 3716018
1257 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G11750.1

Sequence Viewer

Length: 441 bp
ATGCATAGCTCACTGGAGACCACGGCTCCGGCGACGTTGGAGCGACGAGAGTCAAATCTTGGAGACAAACTGATACTAAAAGGGTTGAAATTTTACGGTTTCCATGGAGCGATTGCTGAAGAAAGGACACTGGGGCAGATGTTTCTTGTTGACATTGATGCGTGGGTGAGTCTGAAAAAGGCTGGTGAATCAGACAACTTAGAAGATACAATTAGCTACGTCGACATTTTCAGCCTAGCTAAGGAAATTGTTGAAGGGTCACCAAGAAACCTTTTGGAGACAGTCGCGGAACTTATTGCTTCCAAAACGCTTGAAAAATTCCATCAGATAAACGCTGTTCGAGTGAAGCTCTCAAAGCCAAATGTTGCACTTATTAAGAGCACCATTGATTATTTAGGGGTCGATATATTCAGACAGCGAAACACTAGTTCAAAGAACTGA

Protein Analysis

146

Amino Acids

16.28

Weight (kDa)

6.31

Isoelectric Point (pI)

26.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FolB PF02152 25 - 136 9.5e-33 Dihydroneopterin aldolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 222
AccII CGCG 1 cut(s) 287
AciI CCGC 1 cut(s) 287
AcsI RAATTY 2 cut(s) 89, 317
AcuI CTGAAG 1 cut(s) 138
AfiI CCNNNNNNNGG 1 cut(s) 241
AgsI TTSAA 4 cut(s) 88, 254, 314, 432
AhlI ACTAGT 1 cut(s) 425
AluBI AGCT 4 cut(s) 9, 216, 239, 349
AluI AGCT 4 cut(s) 9, 216, 239, 349
Alw21I GWGCWC 1 cut(s) 383
Alw26I GTCTC 3 cut(s) 11, 57, 272
ApoI RAATTY 2 cut(s) 89, 317
AsuHPI GGTGA 3 cut(s) 178, 197, 252
Bbv12I GWGCWC 1 cut(s) 383
BccI CCATC 1 cut(s) 330
BceAI ACGGC 1 cut(s) 39
BcoDI GTCTC 3 cut(s) 11, 57, 272
BcuI ACTAGT 1 cut(s) 425
BfaI CTAG 2 cut(s) 236, 426
BmiI GGNNCC 1 cut(s) 27
BmrI ACTGGG 1 cut(s) 140
BmsI GCATC 1 cut(s) 148
BmuI ACTGGG 1 cut(s) 140
BoxI GACNNNNGTC 1 cut(s) 49
BplI GAGNNNNNCTC 2 cut(s) 333, 365
BpmI CTGGAG 1 cut(s) 35
Bpu10I CCTNAGC 1 cut(s) 240
BsaI GGTCTC 1 cut(s) 11
BsaJI CCNNGG 2 cut(s) 21, 103
BsaXI ACNNNNNCTCC 2 cut(s) 10, 40
Bsc4I CCNNNNNNNGG 1 cut(s) 241
Bse1I ACTGG 2 cut(s) 18, 135
BseDI CCNNGG 2 cut(s) 21, 103
BseLI CCNNNNNNNGG 1 cut(s) 241
BseNI ACTGG 2 cut(s) 18, 135
Bsh1236I CGCG 1 cut(s) 287
BsiHKAI GWGCWC 1 cut(s) 383
BsiSI CCGG 1 cut(s) 29
BslI CCNNNNNNNGG 1 cut(s) 241
BsmAI GTCTC 3 cut(s) 11, 57, 272
Bso31I GGTCTC 1 cut(s) 11
Bsp1286I GDGCHC 1 cut(s) 383
Bsp19I CCATGG 1 cut(s) 103
BspACI CCGC 1 cut(s) 287
BspFNI CGCG 1 cut(s) 287
BspLI GGNNCC 1 cut(s) 27
BspTNI GGTCTC 1 cut(s) 11
BsrI ACTGG 2 cut(s) 18, 135
BssECI CCNNGG 2 cut(s) 21, 103
BssT1I CCWWGG 1 cut(s) 103
Bst4CI ACNGT 2 cut(s) 98, 283
BstDEI CTNAG 2 cut(s) 199, 240
BstDSI CCRYGG 2 cut(s) 21, 103
BstEII GGTNACC 1 cut(s) 258
BstENI CCTNNNNNAGG 1 cut(s) 239
BstFNI CGCG 1 cut(s) 287
BstMAI GTCTC 3 cut(s) 11, 57, 272
BstMWI GCNNNNNNNGC 1 cut(s) 355
BstPAI GACNNNNGTC 1 cut(s) 49
BstPI GGTNACC 1 cut(s) 258
BstUI CGCG 1 cut(s) 287
BtgI CCRYGG 2 cut(s) 21, 103
BtsIMutI CAGTG 2 cut(s) 11, 128
CviAII CATG 1 cut(s) 104
CviJI RGCY 8 cut(s) 9, 26, 182, 216, 234, 239, 349, 358
CviKI_1 RGCY 8 cut(s) 9, 26, 182, 216, 234, 239, 349, 358
DdeI CTNAG 2 cut(s) 199, 240
Eco130I CCWWGG 1 cut(s) 103
Eco31I GGTCTC 1 cut(s) 11
Eco57I CTGAAG 1 cut(s) 138
Eco91I GGTNACC 1 cut(s) 258
EcoNI CCTNNNNNAGG 1 cut(s) 239
EcoO65I GGTNACC 1 cut(s) 258
EcoT14I CCWWGG 1 cut(s) 103
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 103
FaeI CATG 1 cut(s) 107
FaiI YATR 3 cut(s) 6, 105, 407
FatI CATG 1 cut(s) 103
FblI GTMKAC 1 cut(s) 222
FspBI CTAG 2 cut(s) 236, 426
GsuI CTGGAG 1 cut(s) 35
HapII CCGG 1 cut(s) 29
Hin1II CATG 1 cut(s) 107
HincII GTYRAC 2 cut(s) 151, 223
HindII GTYRAC 2 cut(s) 151, 223
HinfI GANTC 3 cut(s) 50, 169, 188
HpaII CCGG 1 cut(s) 29
HphI GGTGA 3 cut(s) 178, 197, 252
Hpy166II GTNNAC 2 cut(s) 151, 223
Hpy188I TCNGA 4 cut(s) 174, 193, 327, 413
Hpy8I GTNNAC 2 cut(s) 151, 223
Hpy99I CGWCG 3 cut(s) 37, 48, 224
HpyAV CCTTC 1 cut(s) 248
HpyCH4III ACNGT 2 cut(s) 98, 283
HpyCH4IV ACGT 2 cut(s) 35, 219
HpyCH4V TGCA 2 cut(s) 4, 368
HpyF10VI GCNNNNNNNGC 1 cut(s) 355
HpyF3I CTNAG 2 cut(s) 199, 240
HpySE526I ACGT 2 cut(s) 35, 219
Hsp92II CATG 1 cut(s) 107
LmnI GCTCC 3 cut(s) 31, 40, 107
LpnPI CCDG 3 cut(s) 42, 116, 168
LweI GCATC 1 cut(s) 148
MaeI CTAG 2 cut(s) 236, 426
MaeII ACGT 2 cut(s) 35, 219
MaeIII GTNAC 1 cut(s) 258
MboII GAAGA 2 cut(s) 131, 215
MhlI GDGCHC 1 cut(s) 383
MluCI AATT 4 cut(s) 89, 210, 246, 317
MlyI GAGTC 2 cut(s) 59, 178
MmeI TCCRAC 1 cut(s) 18
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 1 cut(s) 375
MspI CCGG 1 cut(s) 29
MvnI CGCG 1 cut(s) 287
MwoI GCNNNNNNNGC 1 cut(s) 355
NcoI CCATGG 1 cut(s) 103
NlaIII CATG 1 cut(s) 107
NlaIV GGNNCC 1 cut(s) 27
NmuCI GTSAC 1 cut(s) 258
NsiI ATGCAT 1 cut(s) 6
PcsI WCGNNNNNNNCGW 1 cut(s) 29
PfeI GAWTC 1 cut(s) 188
PleI GAGTC 2 cut(s) 58, 177
PpsI GAGTC 2 cut(s) 58, 177
PshAI GACNNNNGTC 1 cut(s) 49
PspEI GGTNACC 1 cut(s) 258
PspN4I GGNNCC 1 cut(s) 27
SalI GTCGAC 1 cut(s) 221
SaqAI TTAA 1 cut(s) 375
SchI GAGTC 2 cut(s) 59, 178
SduI GDGCHC 1 cut(s) 383
SetI ASST 7 cut(s) 11, 38, 218, 222, 241, 273, 351
SfaNI GCATC 1 cut(s) 148
SpeI ACTAGT 1 cut(s) 425
Sse9I AATT 4 cut(s) 89, 210, 246, 317
SsiI CCGC 1 cut(s) 287
SspMI CTAG 2 cut(s) 236, 426
StyI CCWWGG 1 cut(s) 103
TaaI ACNGT 2 cut(s) 98, 283
TaiI ACGT 2 cut(s) 38, 222
TaqI TCGA 3 cut(s) 222, 340, 402
TasI AATT 4 cut(s) 89, 210, 246, 317
TfiI GAWTC 1 cut(s) 188
Tru1I TTAA 1 cut(s) 375
Tru9I TTAA 1 cut(s) 375
TscAI CASTG 2 cut(s) 18, 135
TseFI GTSAC 1 cut(s) 258
Tsp45I GTSAC 1 cut(s) 258
TspRI CASTG 2 cut(s) 18, 135
XagI CCTNNNNNAGG 1 cut(s) 239
XapI RAATTY 2 cut(s) 89, 317
XmiI GTMKAC 1 cut(s) 222
XspI CTAG 2 cut(s) 236, 426
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.