Rh7DG310000

Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0007343
Physical Location & Seq
Reverse (-)
36287532 .. 36289776
2245 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG310000.1

Sequence Viewer

Length: 624 bp
ATGAGAGGTTTCCGGTTGCTAATAGGGTGGGCTCGCGAAACCCAAAAAAACCGCAGTTGGAGATTATCCAAGCAGCATCGAATCTTCATTCCTCATTTCCTCAGTTCCTCACATCACAAGTTCACAGCGACTGAAGCTGAACGACGCCGCCTCAGGCCCTCAACCCTGACTATTTCCCCATCTTCGTGGGACTCAGCAGCCTTTTATCTTGAAAGAACAGCACATGAAGATGCTGCAATTAGAGGGGGAGATAAGCTTGTACTAAAGGGTTTGAAGTTCCATGGTTTCCATGGGGTGAAGCCAGAAGAGAGGAAGTTGGGTCAGAAGTTTCTGATAGATGTTGATGCTTGGATGGATCTTCGGGTGGCTGGAAGATCTGATCAGTTGTCAGACACCATTAGCTACACCGAAATTTATCGCATTGTCAAAGAGGTTGTAGAAGGGCCACCTCATAATCTTCTGGAGTCTGTTGCTGAACTCATTGCATCTACCACTCTGAAAAACTATCCCCAGATAGCTGCTGTCTCTGTGAAAGTTGGAAAGCCTCACGTTGCTGTTCATGGTCCTCTTGATTACTTGGGCGTTGAGATATTTAGATACAGGAGTATTGATGCACCGAACTAA

Protein Analysis

207

Amino Acids

23.57

Weight (kDa)

9.76

Isoelectric Point (pI)

36.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FolB PF02152 87 - 197 2.6e-36 Dihydroneopterin aldolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 36
AciI CCGC 2 cut(s) 52, 148
AclWI GGATC 1 cut(s) 363
AcsI RAATTY 1 cut(s) 411
AcuI CTGAAG 1 cut(s) 153
AcyI GRCGYC 1 cut(s) 145
AfaI GTAC 1 cut(s) 261
AgsI TTSAA 2 cut(s) 212, 274
AluBI AGCT 4 cut(s) 137, 256, 402, 518
AluI AGCT 4 cut(s) 137, 256, 402, 518
Alw26I GTCTC 1 cut(s) 529
AlwI GGATC 1 cut(s) 363
AlwNI CAGNNNCTG 1 cut(s) 131
AoxI GGCC 2 cut(s) 155, 443
ApeKI GCWGC 4 cut(s) 73, 197, 233, 518
ApoI RAATTY 1 cut(s) 411
AspS9I GGNCC 3 cut(s) 156, 443, 563
AsuHPI GGTGA 1 cut(s) 307
AvaII GGWCC 1 cut(s) 563
AxyI CCTNAGG 1 cut(s) 152
BaeI ACNNNNGTAYC 2 cut(s) 589, 622
BanII GRGCYC 1 cut(s) 34
BbvI GCAGC 4 cut(s) 85, 209, 220, 505
BccI CCATC 2 cut(s) 187, 346
BclI TGATCA 1 cut(s) 379
BcoDI GTCTC 1 cut(s) 529
BglII AGATCT 1 cut(s) 374
BisI GCNGC 5 cut(s) 74, 148, 198, 234, 519
BlsI GCNGC 5 cut(s) 75, 149, 199, 235, 520
Bme18I GGWCC 1 cut(s) 563
BmgT120I GGNCC 3 cut(s) 156, 443, 563
BmsI GCATC 5 cut(s) 85, 220, 334, 494, 601
BpmI CTGGAG 1 cut(s) 482
BsaHI GRCGYC 1 cut(s) 145
BsaJI CCNNGG 2 cut(s) 280, 289
BsaWI WCCGGW 1 cut(s) 12
Bse21I CCTNAGG 1 cut(s) 152
Bse3DI GCAATG 1 cut(s) 480
BseDI CCNNGG 2 cut(s) 280, 289
BseGI GGATG 1 cut(s) 357
BseMI GCAATG 1 cut(s) 480
BseMII CTCAG 3 cut(s) 115, 166, 207
BseXI GCAGC 4 cut(s) 85, 209, 220, 505
Bsh1236I CGCG 1 cut(s) 36
BshFI GGCC 2 cut(s) 157, 445
BsiSI CCGG 1 cut(s) 13
BslFI GGGAC 1 cut(s) 203
BsmAI GTCTC 1 cut(s) 529
BsmFI GGGAC 1 cut(s) 203
BsnI GGCC 2 cut(s) 157, 445
Bsp1286I GDGCHC 1 cut(s) 34
Bsp143I GATC 3 cut(s) 355, 374, 379
Bsp19I CCATGG 2 cut(s) 280, 289
Bsp68I TCGCGA 1 cut(s) 36
BspACI CCGC 2 cut(s) 52, 148
BspANI GGCC 2 cut(s) 157, 445
BspCNI CTCAG 3 cut(s) 114, 165, 206
BspFNI CGCG 1 cut(s) 36
BspPI GGATC 1 cut(s) 363
BsrDI GCAATG 1 cut(s) 480
BssECI CCNNGG 2 cut(s) 280, 289
BssMI GATC 3 cut(s) 355, 374, 379
BssNI GRCGYC 1 cut(s) 145
BssT1I CCWWGG 2 cut(s) 280, 289
Bst6I CTCTTC 1 cut(s) 300
BstACI GRCGYC 1 cut(s) 145
BstC8I GCNNGC 1 cut(s) 34
BstDEI CTNAG 3 cut(s) 101, 152, 193
BstDSI CCRYGG 2 cut(s) 280, 289
BstF5I GGATG 1 cut(s) 357
BstFNI CGCG 1 cut(s) 36
BstKTI GATC 3 cut(s) 358, 377, 382
BstMAI GTCTC 1 cut(s) 529
BstMBI GATC 3 cut(s) 355, 374, 379
BstMWI GCNNNNNNNGC 1 cut(s) 134
BstUI CGCG 1 cut(s) 36
BstV1I GCAGC 4 cut(s) 85, 209, 220, 505
BstX2I RGATCY 2 cut(s) 355, 374
BstXI CCANNNNNNTGG 1 cut(s) 186
BstYI RGATCY 2 cut(s) 355, 374
Bsu36I CCTNAGG 1 cut(s) 152
BsuRI GGCC 2 cut(s) 157, 445
BtgI CCRYGG 2 cut(s) 280, 289
BtsCI GGATG 1 cut(s) 357
BtuMI TCGCGA 1 cut(s) 36
Cac8I GCNNGC 1 cut(s) 34
CaiI CAGNNNCTG 1 cut(s) 131
Cfr13I GGNCC 3 cut(s) 156, 443, 563
CseI GACGC 1 cut(s) 153
Csp6I GTAC 1 cut(s) 260
CviAII CATG 4 cut(s) 224, 281, 290, 560
CviQI GTAC 1 cut(s) 260
DdeI CTNAG 3 cut(s) 101, 152, 193
DpnI GATC 3 cut(s) 357, 376, 381
DpnII GATC 3 cut(s) 355, 374, 379
Eam1104I CTCTTC 1 cut(s) 300
EarI CTCTTC 1 cut(s) 300
Eco130I CCWWGG 2 cut(s) 280, 289
Eco24I GRGCYC 1 cut(s) 34
Eco47I GGWCC 1 cut(s) 563
Eco57I CTGAAG 1 cut(s) 153
Eco81I CCTNAGG 1 cut(s) 152
EcoO109I RGGNCCY 1 cut(s) 156
EcoT14I CCWWGG 2 cut(s) 280, 289
EcoT38I GRGCYC 1 cut(s) 34
ErhI CCWWGG 2 cut(s) 280, 289
FaeI CATG 4 cut(s) 227, 284, 293, 563
FaiI YATR 5 cut(s) 225, 282, 291, 453, 561
FaqI GGGAC 1 cut(s) 203
FatI CATG 4 cut(s) 223, 280, 289, 559
FbaI TGATCA 1 cut(s) 379
Fnu4HI GCNGC 5 cut(s) 74, 148, 198, 234, 519
FokI GGATG 1 cut(s) 364
FriOI GRGCYC 1 cut(s) 34
Fsp4HI GCNGC 5 cut(s) 74, 148, 198, 234, 519
GluI GCNGC 5 cut(s) 74, 148, 198, 234, 519
GsuI CTGGAG 1 cut(s) 482
HaeIII GGCC 2 cut(s) 157, 445
HapII CCGG 1 cut(s) 13
HgaI GACGC 1 cut(s) 153
Hin1I GRCGYC 1 cut(s) 145
Hin1II CATG 4 cut(s) 227, 284, 293, 563
HindIII AAGCTT 1 cut(s) 254
HinfI GANTC 3 cut(s) 81, 191, 464
HpaII CCGG 1 cut(s) 13
HphI GGTGA 1 cut(s) 307
Hpy166II GTNNAC 1 cut(s) 123
Hpy188I TCNGA 5 cut(s) 324, 333, 379, 391, 498
Hpy188III TCNNGA 4 cut(s) 35, 209, 461, 569
Hpy8I GTNNAC 1 cut(s) 123
Hpy99I CGWCG 1 cut(s) 147
HpyAV CCTTC 1 cut(s) 434
HpyCH4IV ACGT 1 cut(s) 549
HpyCH4V TGCA 3 cut(s) 236, 485, 614
HpyF10VI GCNNNNNNNGC 1 cut(s) 134
HpyF3I CTNAG 3 cut(s) 101, 152, 193
HpySE526I ACGT 1 cut(s) 549
Hsp92I GRCGYC 1 cut(s) 145
Hsp92II CATG 4 cut(s) 227, 284, 293, 563
Ksp22I TGATCA 1 cut(s) 379
Kzo9I GATC 3 cut(s) 355, 374, 379
LpnPI CCDG 8 cut(s) 26, 139, 179, 315, 354, 446, 524, 586
Lsp1109I GCAGC 4 cut(s) 85, 209, 220, 505
LweI GCATC 5 cut(s) 85, 220, 334, 494, 601
MaeII ACGT 1 cut(s) 549
MalI GATC 3 cut(s) 357, 376, 381
MboI GATC 3 cut(s) 355, 374, 379
MboII GAAGA 7 cut(s) 76, 174, 239, 317, 350, 384, 449
MflI RGATCY 2 cut(s) 355, 374
MhlI GDGCHC 1 cut(s) 34
MluCI AATT 2 cut(s) 237, 411
MlyI GAGTC 2 cut(s) 185, 473
MmeI TCCRAC 2 cut(s) 38, 517
MslI CAYNNNNRTG 2 cut(s) 184, 228
MspI CCGG 1 cut(s) 13
MvnI CGCG 1 cut(s) 36
MwoI GCNNNNNNNGC 1 cut(s) 134
NcoI CCATGG 2 cut(s) 280, 289
NdeII GATC 3 cut(s) 355, 374, 379
NlaIII CATG 4 cut(s) 227, 284, 293, 563
NruI TCGCGA 1 cut(s) 36
PfeI GAWTC 1 cut(s) 81
PkrI GCNGC 5 cut(s) 75, 149, 199, 235, 520
PleI GAGTC 2 cut(s) 185, 472
PpsI GAGTC 2 cut(s) 185, 472
PspPI GGNCC 3 cut(s) 156, 443, 563
PstNI CAGNNNCTG 1 cut(s) 131
PsuI RGATCY 2 cut(s) 355, 374
RruI TCGCGA 1 cut(s) 36
RsaI GTAC 1 cut(s) 261
RsaNI GTAC 1 cut(s) 260
RseI CAYNNNNRTG 2 cut(s) 184, 228
SatI GCNGC 5 cut(s) 74, 148, 198, 234, 519
Sau3AI GATC 3 cut(s) 355, 374, 379
Sau96I GGNCC 3 cut(s) 156, 443, 563
SchI GAGTC 2 cut(s) 185, 473
SduI GDGCHC 1 cut(s) 34
SetI ASST 8 cut(s) 10, 139, 258, 404, 435, 451, 520, 552
SfaNI GCATC 5 cut(s) 85, 220, 334, 494, 601
SinI GGWCC 1 cut(s) 563
SmiMI CAYNNNNRTG 2 cut(s) 184, 228
Sse9I AATT 2 cut(s) 237, 411
SsiI CCGC 2 cut(s) 52, 148
StyI CCWWGG 2 cut(s) 280, 289
TaiI ACGT 1 cut(s) 552
TaqI TCGA 1 cut(s) 79
TasI AATT 2 cut(s) 237, 411
TatI WGTACW 1 cut(s) 259
TauI GCSGC 1 cut(s) 150
TfiI GAWTC 1 cut(s) 81
TseI GCWGC 4 cut(s) 73, 197, 233, 518
TspDTI ATGAA 3 cut(s) 76, 240, 548
VpaK11BI GGWCC 1 cut(s) 563
XapI RAATTY 1 cut(s) 411
XcmI CCANNNNNNNNNTGG 1 cut(s) 287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.