FvH4_6g20690

Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0007343
Physical Location & Seq
Forward (+)
14271122 .. 14272335
1214 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g20690.t1

Sequence Viewer

Length: 420 bp
ATGGCTACTGGAACAGAACAGGAGGATGCGGCAATTAGAGGGGGAGATAAGCTTGTACTAAGGGGTTTGAAGTTCCATGGTTTCCATGGGGTGAAGCCAGAAGAAAAGACGTTGGGTCAGAAATTTCTTATAGATGTTGATGCTTGGATGGATCTTCGGGTGGCTGGAAAATCTGATAATTTGTCAGACACCATTAGCTACACTGATATATATCGCATTGCAAAAGAAGTTGTCGAAGGGCCATCTCATAATCTTCTGGAGTCTGTTGCTGAACTCATTGCATCTACCACTCTGAAAAACTATCCGCGGATTTCTGCCGTCTCTGTGAAAGTTGGAAAGCCTCACGTCGCTGTTCATGGTCCTCTCGATTACTTGGGTGTTGAGATATTTAGATACAGAAGTATTGATGCACTGAACTAA

Protein Analysis

140

Amino Acids

15.29

Weight (kDa)

6.19

Isoelectric Point (pI)

17.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FolB PF02152 19 - 129 9.1e-36 Dihydroneopterin aldolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 307
AciI CCGC 3 cut(s) 29, 305, 307
AclWI GGATC 1 cut(s) 159
AcsI RAATTY 1 cut(s) 122
AfaI GTAC 1 cut(s) 57
AgsI TTSAA 1 cut(s) 70
AhdI GACNNNNNGTC 1 cut(s) 114
AjiI CACGTC 1 cut(s) 346
AluBI AGCT 2 cut(s) 52, 198
AluI AGCT 2 cut(s) 52, 198
Alw26I GTCTC 1 cut(s) 325
AlwI GGATC 1 cut(s) 159
AoxI GGCC 1 cut(s) 239
ApoI RAATTY 1 cut(s) 122
AspS9I GGNCC 2 cut(s) 239, 359
AsuHPI GGTGA 1 cut(s) 103
AvaII GGWCC 1 cut(s) 359
BaeI ACNNNNGTAYC 2 cut(s) 385, 418
BccI CCATC 2 cut(s) 142, 250
BceAI ACGGC 1 cut(s) 302
BcoDI GTCTC 1 cut(s) 325
BisI GCNGC 1 cut(s) 30
BlsI GCNGC 1 cut(s) 31
Bme18I GGWCC 1 cut(s) 359
BmeRI GACNNNNNGTC 1 cut(s) 114
BmgBI CACGTC 1 cut(s) 346
BmgT120I GGNCC 2 cut(s) 239, 359
BmsI GCATC 4 cut(s) 16, 130, 290, 397
BpmI CTGGAG 1 cut(s) 278
BsaBI GATNNNNATC 1 cut(s) 210
BsaJI CCNNGG 3 cut(s) 76, 85, 305
Bse1I ACTGG 1 cut(s) 13
Bse3DI GCAATG 2 cut(s) 216, 276
Bse8I GATNNNNATC 1 cut(s) 210
BseDI CCNNGG 3 cut(s) 76, 85, 305
BseGI GGATG 2 cut(s) 31, 153
BseJI GATNNNNATC 1 cut(s) 210
BseMI GCAATG 2 cut(s) 216, 276
BseNI ACTGG 1 cut(s) 13
Bsh1236I CGCG 1 cut(s) 307
BshFI GGCC 1 cut(s) 241
BsmAI GTCTC 1 cut(s) 325
BsmBI CGTCTC 1 cut(s) 325
BsnI GGCC 1 cut(s) 241
Bsp143I GATC 1 cut(s) 151
Bsp19I CCATGG 2 cut(s) 76, 85
BspACI CCGC 3 cut(s) 29, 305, 307
BspANI GGCC 1 cut(s) 241
BspFNI CGCG 1 cut(s) 307
BspPI GGATC 1 cut(s) 159
BsrDI GCAATG 2 cut(s) 216, 276
BsrI ACTGG 1 cut(s) 13
BssECI CCNNGG 3 cut(s) 76, 85, 305
BssMI GATC 1 cut(s) 151
BssT1I CCWWGG 2 cut(s) 76, 85
BstDEI CTNAG 1 cut(s) 59
BstDSI CCRYGG 3 cut(s) 76, 85, 305
BstF5I GGATG 2 cut(s) 31, 153
BstFNI CGCG 1 cut(s) 307
BstKTI GATC 1 cut(s) 154
BstMAI GTCTC 1 cut(s) 325
BstMBI GATC 1 cut(s) 151
BstUI CGCG 1 cut(s) 307
BstX2I RGATCY 1 cut(s) 151
BstYI RGATCY 1 cut(s) 151
BsuRI GGCC 1 cut(s) 241
BtgI CCRYGG 3 cut(s) 76, 85, 305
BtrI CACGTC 1 cut(s) 346
BtsCI GGATG 2 cut(s) 31, 153
BtsIMutI CAGTG 2 cut(s) 201, 410
Cfr13I GGNCC 2 cut(s) 239, 359
Cfr42I CCGCGG 1 cut(s) 308
Csp6I GTAC 1 cut(s) 56
CviAII CATG 3 cut(s) 77, 86, 356
CviJI RGCY 7 cut(s) 5, 52, 97, 164, 198, 241, 340
CviKI_1 RGCY 7 cut(s) 5, 52, 97, 164, 198, 241, 340
CviQI GTAC 1 cut(s) 56
DdeI CTNAG 1 cut(s) 59
DpnI GATC 1 cut(s) 153
DpnII GATC 1 cut(s) 151
DriI GACNNNNNGTC 1 cut(s) 114
Eam1105I GACNNNNNGTC 1 cut(s) 114
Eco130I CCWWGG 2 cut(s) 76, 85
Eco47I GGWCC 1 cut(s) 359
EcoT14I CCWWGG 2 cut(s) 76, 85
ErhI CCWWGG 2 cut(s) 76, 85
Esp3I CGTCTC 1 cut(s) 325
FaeI CATG 3 cut(s) 80, 89, 359
FaiI YATR 7 cut(s) 78, 87, 131, 209, 211, 249, 357
FatI CATG 3 cut(s) 76, 85, 355
Fnu4HI GCNGC 1 cut(s) 30
FokI GGATG 2 cut(s) 38, 160
Fsp4HI GCNGC 1 cut(s) 30
GluI GCNGC 1 cut(s) 30
GsuI CTGGAG 1 cut(s) 278
HaeIII GGCC 1 cut(s) 241
Hin1II CATG 3 cut(s) 80, 89, 359
HindIII AAGCTT 1 cut(s) 50
HinfI GANTC 1 cut(s) 260
HphI GGTGA 1 cut(s) 103
Hpy188I TCNGA 4 cut(s) 120, 175, 187, 294
Hpy188III TCNNGA 2 cut(s) 257, 365
Hpy99I CGWCG 1 cut(s) 350
HpyAV CCTTC 1 cut(s) 230
HpyCH4IV ACGT 2 cut(s) 110, 345
HpyCH4V TGCA 3 cut(s) 221, 281, 410
HpyF3I CTNAG 1 cut(s) 59
HpySE526I ACGT 2 cut(s) 110, 345
Hsp92II CATG 3 cut(s) 80, 89, 359
KspI CCGCGG 1 cut(s) 308
Kzo9I GATC 1 cut(s) 151
LpnPI CCDG 4 cut(s) 5, 111, 150, 242
LweI GCATC 4 cut(s) 16, 130, 290, 397
MaeII ACGT 2 cut(s) 110, 345
MalI GATC 1 cut(s) 153
MboI GATC 1 cut(s) 151
MboII GAAGA 3 cut(s) 113, 146, 245
MflI RGATCY 1 cut(s) 151
MluCI AATT 3 cut(s) 33, 122, 178
MlyI GAGTC 1 cut(s) 269
MmeI TCCRAC 1 cut(s) 313
MnlI CCTC 4 cut(s) 16, 32, 351, 372
MspA1I CMGCKG 1 cut(s) 307
MvnI CGCG 1 cut(s) 307
NcoI CCATGG 2 cut(s) 76, 85
NdeII GATC 1 cut(s) 151
NlaIII CATG 3 cut(s) 80, 89, 359
PkrI GCNGC 1 cut(s) 31
PleI GAGTC 1 cut(s) 268
PpsI GAGTC 1 cut(s) 268
PspPI GGNCC 2 cut(s) 239, 359
PsuI RGATCY 1 cut(s) 151
RsaI GTAC 1 cut(s) 57
RsaNI GTAC 1 cut(s) 56
SacII CCGCGG 1 cut(s) 308
SatI GCNGC 1 cut(s) 30
Sau3AI GATC 1 cut(s) 151
Sau96I GGNCC 2 cut(s) 239, 359
SchI GAGTC 1 cut(s) 269
SetI ASST 4 cut(s) 54, 113, 200, 348
SfaNI GCATC 4 cut(s) 16, 130, 290, 397
Sfr303I CCGCGG 1 cut(s) 308
SgrBI CCGCGG 1 cut(s) 308
SinI GGWCC 1 cut(s) 359
Sse9I AATT 3 cut(s) 33, 122, 178
SsiI CCGC 3 cut(s) 29, 305, 307
StyI CCWWGG 2 cut(s) 76, 85
TaiI ACGT 2 cut(s) 113, 348
TaqI TCGA 2 cut(s) 234, 366
TasI AATT 3 cut(s) 33, 122, 178
TatI WGTACW 1 cut(s) 55
TauI GCSGC 1 cut(s) 32
TscAI CASTG 2 cut(s) 208, 417
TspDTI ATGAA 1 cut(s) 344
TspRI CASTG 2 cut(s) 208, 417
VpaK11BI GGWCC 1 cut(s) 359
XapI RAATTY 1 cut(s) 122
XcmI CCANNNNNNNNNTGG 1 cut(s) 83
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.