AT3G11830
TCP Family

assists the folding of proteins upon ATP hydrolysis

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
3732628 .. 3736471
3844 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G11830.2

Sequence Viewer

Length: 1674 bp
ATGGCATCGATGATGCAACCGCAGATCATACTGCTGAAGGAAGGGACGGACACATCTCAGGGCAAAGCGCAACTAGTAAGCAACATCAACGCTTGCACTGCTGTTGGAGATGTAGTTCGAACCACGCTCGGGCCACGAGGGATGGACAAACTCATTCACGACGATAAAGGATCCGTCACCATTTCTAACGATGGTGCTACCATCATGAAGCTCCTCGACATTGTTCATCCTGCTGCTAAGATCCTCGTCGATATCGCCAAATCCCAAGACTCCGAGGTGGGTGATGGGACAACTACAGTGGTTCTTCTTGCAGCAGAGTTTTTGAAGGAAGCGAAGCCATTTATTGAGGATGGTGTTCACGCTCAGAATCTAATTAGGAGTTACCGCACTGCAAGCACTTTGGCAATTGCCAAGGTTAAAGAACTCGCTGTTAGCATTGAGGGGAAGAGTGTAGAGGAAAAGAAAGGTTTATTGGCTAAATGTGCTGCTACGACTCTCTCATCTAAGCTTATCGGTGGAGAAAAGGAGTTTTTTGCTACAATGGTTGTTGATGCTGTTATGGCCATTGGGAATGACGACAGGCTAAATCTGATTGGGATCAAGAAGGTTCCTGGTGGCAATATGCGAGACTCTTTCCTCGTTGATGGTGTAGCTTTCAAAAAAACATTCTCGTATGCTGGTTTTGAGCAACAGCCAAAGAAATTTCTTAACCCCAAAATTCTCTTGCTTAACATCGAATTGGAGTTGAAATCTGAGAAGGAAAACGCTGAAATTAGGCTGTCAGATCCATCACAGTACCAGTCAATAGTTGATGCAGAATGGAATATCATTTATGACAAACTAGACAAATGTGTTGAGAGTGGAGCAAAAGTTGTTCTTTCTCGATTGGCTATTGGTGATCTAGCTACTCAGTATTTTGCCGATCGTGATATTTTCTGTGCTGGTCGTGTTGCTGAGGAAGATCTTAACCGTGTGGCTGCTGCAGCTGGAGGAACAGTTCAGACAAGTGTTAACAACATAATAGATGAGGTTCTTGGAACTTGTGAGATTTTTGAGGAAAAACAAGTTGGTGGGGAGAGATTTAATATATTCAGTGGTTGCCCTTCAGGACGAACAGCAACTATTGTTCTCCGTGGTGGAGCTGATCAGTTCATCGAAGAAGCTGAGCGGAGTTTACATGATGCGATTATGATTGTGAGAAGAGCTGTGAAGAACTCAACTGTTGTTCCTGGAGGTGGAGCTATAGATATGGAGATAAGCAAGTACCTGAGGCAGCATTCAAGAACAATTGCTGGGAAGTCACAGCTTTTCATCAACTCTTATGCGAAGGCTCTAGAGGTTATTCCACGACAGTTATGTGATAATGCTGGATTTGATGCAACTGACGTCTTGAATAAACTTAGACAAAAACACGCCATGCAAAGCGGTGAAGGAGCTTCGTATGGAGTGGACATTAACACTGGTGGCATAGCAGATTCTTTTGCTAACTTCGTTTGGGAACCAGCAGTTGTGAAGATCAACGCAATAAATGCTGCGACTGAAGCGGCTTGCCTCATTCTTAGTGTCGACGAAACCGTGAAGAACCCTAAATCTGAGAGCGCACAGGGAGACGCCGCAGGTGCAATGGGGAGAGGACGCGGTGGAGGTCGTGGCCGTGGAATGCGAAGGCGATAA

Protein Analysis

557

Amino Acids

59.78

Weight (kDa)

6.03

Isoelectric Point (pI)

35.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cpn60_TCP1 PF00118 36 - 526 1.7e-157 TCP-1/cpn60 chaperonin family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1607
AatII GACGTC 1 cut(s) 1389
Acc36I ACCTGC 1 cut(s) 1607
AccBSI CCGCTC 1 cut(s) 1168
AccI GTMKAC 1 cut(s) 1566
AccII CGCG 1 cut(s) 1638
AciI CCGC 7 cut(s) 20, 385, 1168, 1425, 1544, 1614, 1638
AclWI GGATC 5 cut(s) 165, 178, 235, 605, 779
AcoI YGGCCR 2 cut(s) 561, 1651
AcsI RAATTY 2 cut(s) 701, 717
AcuI CTGAAG 3 cut(s) 56, 1089, 1560
AcyI GRCGYC 2 cut(s) 1386, 1611
AfaI GTAC 2 cut(s) 797, 1265
AfiI CCNNNNNNNGG 2 cut(s) 129, 1235
AgsI TTSAA 5 cut(s) 325, 658, 748, 1281, 1393
AhlI ACTAGT 1 cut(s) 73
AjnI CCWGG 2 cut(s) 610, 1228
AjuI GAANNNNNNNTTGG 4 cut(s) 455, 487, 1050, 1082
AloI GAACNNNNNNTCC 4 cut(s) 99, 131, 981, 1013
Alw26I GTCTC 2 cut(s) 621, 1602
AlwI GGATC 5 cut(s) 165, 178, 235, 605, 779
Ama87I CYCGRG 1 cut(s) 128
AoxI GGCC 3 cut(s) 131, 561, 1651
ApeKI GCWGC 8 cut(s) 233, 311, 485, 977, 980, 983, 1273, 1532
ApoI RAATTY 2 cut(s) 701, 717
AspLEI GCGC 2 cut(s) 70, 1601
AspS9I GGNCC 1 cut(s) 131
AsuHPI GGTGA 4 cut(s) 169, 293, 908, 1439
AsuII TTCGAA 1 cut(s) 118
AvaI CYCGRG 1 cut(s) 128
AxyI CCTNAGG 1 cut(s) 1268
BalI TGGCCA 1 cut(s) 563
BamHI GGATCC 1 cut(s) 170
BauI CACGAG 1 cut(s) 135
BbvCI CCTCAGC 1 cut(s) 954
BbvI GCAGC 8 cut(s) 220, 323, 472, 964, 967, 995, 1285, 1519
BccI CCATC 7 cut(s) 136, 185, 209, 278, 344, 638, 796
BceAI ACGGC 1 cut(s) 1638
BciT130I CCWGG 2 cut(s) 612, 1230
BclI TGATCA 1 cut(s) 1144
BcoDI GTCTC 2 cut(s) 621, 1602
BcuI ACTAGT 1 cut(s) 73
BfaI CTAG 4 cut(s) 74, 842, 902, 1334
BfmI CTRYAG 3 cut(s) 294, 981, 1242
BfuAI ACCTGC 1 cut(s) 1607
BglII AGATCT 1 cut(s) 961
BlpI GCTNAGC 1 cut(s) 1164
Bme1390I CCNGG 2 cut(s) 612, 1230
BmeT110I CYCGRG 1 cut(s) 128
BmgT120I GGNCC 1 cut(s) 131
BmiI GGNNCC 3 cut(s) 172, 609, 1500
BmrFI CCNGG 2 cut(s) 612, 1230
BmsI GCATC 6 cut(s) 3, 14, 541, 802, 1171, 1366
BpmI CTGGAG 2 cut(s) 1008, 1251
Bpu10I CCTNAGC 1 cut(s) 954
Bpu1102I GCTNAGC 1 cut(s) 1164
Bpu14I TTCGAA 1 cut(s) 118
Bsa29I ATCGAT 1 cut(s) 8
BsaBI GATNNNNATC 1 cut(s) 596
BsaHI GRCGYC 2 cut(s) 1386, 1611
BsaJI CCNNGG 4 cut(s) 273, 411, 1132, 1654
BsaXI ACNNNNNCTCC 6 cut(s) 99, 129, 855, 885, 981, 1011
Bsc4I CCNNNNNNNGG 2 cut(s) 129, 1235
Bse1I ACTGG 2 cut(s) 799, 1465
Bse21I CCTNAGG 1 cut(s) 1268
Bse3DI GCAATG 1 cut(s) 1629
Bse8I GATNNNNATC 1 cut(s) 596
BseBI CCWGG 2 cut(s) 612, 1230
BseCI ATCGAT 1 cut(s) 8
BseDI CCNNGG 4 cut(s) 273, 411, 1132, 1654
BseGI GGATG 3 cut(s) 147, 226, 355
BseJI GATNNNNATC 1 cut(s) 596
BseLI CCNNNNNNNGG 2 cut(s) 129, 1235
BseMI GCAATG 1 cut(s) 1629
BseMII CTCAG 8 cut(s) 71, 377, 744, 923, 945, 1155, 1259, 1584
BseNI ACTGG 2 cut(s) 799, 1465
BseRI GAGGAG 1 cut(s) 203
BseXI GCAGC 8 cut(s) 220, 323, 472, 964, 967, 995, 1285, 1519
BseYI CCCAGC 1 cut(s) 1292
Bsh1236I CGCG 1 cut(s) 1638
Bsh1285I CGRYCG 1 cut(s) 925
BshFI GGCC 3 cut(s) 133, 563, 1653
BshVI ATCGAT 1 cut(s) 8
BsiEI CGRYCG 1 cut(s) 925
BsiHKCI CYCGRG 1 cut(s) 128
BslFI GGGAC 2 cut(s) 58, 301
BslI CCNNNNNNNGG 2 cut(s) 129, 1235
BsmAI GTCTC 2 cut(s) 621, 1602
BsmBI CGTCTC 1 cut(s) 1602
BsmFI GGGAC 2 cut(s) 58, 301
BsmI GAATGC 2 cut(s) 1276, 1665
BsnI GGCC 3 cut(s) 133, 563, 1653
BsoBI CYCGRG 1 cut(s) 128
Bsp119I TTCGAA 1 cut(s) 118
Bsp1720I GCTNAGC 1 cut(s) 1164
BspACI CCGC 7 cut(s) 20, 385, 1168, 1425, 1544, 1614, 1638
BspANI GGCC 3 cut(s) 133, 563, 1653
BspCNI CTCAG 8 cut(s) 70, 376, 745, 922, 946, 1156, 1260, 1585
BspDI ATCGAT 1 cut(s) 8
BspFNI CGCG 1 cut(s) 1638
BspHI TCATGA 1 cut(s) 204
BspLI GGNNCC 3 cut(s) 172, 609, 1500
BspMAI CTGCAG 1 cut(s) 985
BspMI ACCTGC 1 cut(s) 1607
BspPI GGATC 5 cut(s) 165, 178, 235, 605, 779
BspQI GCTCTTC 1 cut(s) 1195
BspT104I TTCGAA 1 cut(s) 118
BsrBI CCGCTC 1 cut(s) 1168
BsrDI GCAATG 1 cut(s) 1629
BsrI ACTGG 2 cut(s) 799, 1465
BssECI CCNNGG 4 cut(s) 273, 411, 1132, 1654
BssNI GRCGYC 2 cut(s) 1386, 1611
BssSI CACGAG 1 cut(s) 135
BssT1I CCWWGG 1 cut(s) 411
Bst2BI CACGAG 1 cut(s) 135
Bst2UI CCWGG 2 cut(s) 612, 1230
Bst4CI ACNGT 7 cut(s) 298, 795, 971, 997, 1222, 1353, 1576
Bst6I CTCTTC 2 cut(s) 440, 1195
BstACI GRCGYC 2 cut(s) 1386, 1611
BstAPI GCANNNNNTGC 1 cut(s) 1529
BstBI TTCGAA 1 cut(s) 118
BstC8I GCNNGC 3 cut(s) 94, 394, 1549
BstDSI CCRYGG 2 cut(s) 1132, 1654
BstF5I GGATG 3 cut(s) 147, 226, 355
BstFNI CGCG 1 cut(s) 1638
BstHHI GCGC 2 cut(s) 70, 1601
BstMAI GTCTC 2 cut(s) 621, 1602
BstMCI CGRYCG 1 cut(s) 925
BstMWI GCNNNNNNNGC 8 cut(s) 98, 393, 482, 560, 983, 1529, 1541, 1619
BstNI CCWGG 2 cut(s) 612, 1230
BstSCI CCNGG 2 cut(s) 610, 1228
BstSFI CTRYAG 3 cut(s) 294, 981, 1242
BstUI CGCG 1 cut(s) 1638
BstV1I GCAGC 8 cut(s) 220, 323, 472, 964, 967, 995, 1285, 1519
BstX2I RGATCY 4 cut(s) 170, 240, 784, 961
BstYI RGATCY 4 cut(s) 170, 240, 784, 961
Bsu15I ATCGAT 1 cut(s) 8
Bsu36I CCTNAGG 1 cut(s) 1268
BsuRI GGCC 3 cut(s) 133, 563, 1653
BsuTUI ATCGAT 1 cut(s) 8
BtgI CCRYGG 2 cut(s) 1132, 1654
BtsCI GGATG 3 cut(s) 147, 226, 355
BtsI GCAGTG 2 cut(s) 96, 387
BtsIMutI CAGTG 5 cut(s) 96, 303, 387, 1099, 1458
BveI ACCTGC 1 cut(s) 1607
Cac8I GCNNGC 3 cut(s) 94, 394, 1549
CciI TCATGA 1 cut(s) 204
CfoI GCGC 2 cut(s) 70, 1601
Cfr13I GGNCC 1 cut(s) 131
ClaI ATCGAT 1 cut(s) 8
CseI GACGC 2 cut(s) 1619, 1644
Csp6I GTAC 2 cut(s) 796, 1264
CspCI CAANNNNNGTGG 2 cut(s) 279, 314
CviAII CATG 3 cut(s) 205, 1178, 1417
CviQI GTAC 2 cut(s) 796, 1264
EaeI YGGCCR 2 cut(s) 561, 1651
Eam1104I CTCTTC 2 cut(s) 440, 1195
EarI CTCTTC 2 cut(s) 440, 1195
Eco130I CCWWGG 1 cut(s) 411
Eco32I GATATC 1 cut(s) 253
Eco57I CTGAAG 3 cut(s) 56, 1089, 1560
Eco81I CCTNAGG 1 cut(s) 1268
Eco88I CYCGRG 1 cut(s) 128
EcoRII CCWGG 2 cut(s) 610, 1228
EcoRV GATATC 1 cut(s) 253
EcoT14I CCWWGG 1 cut(s) 411
ErhI CCWWGG 1 cut(s) 411
Esp3I CGTCTC 1 cut(s) 1602
FaeI CATG 3 cut(s) 208, 1181, 1420
FalI AAGNNNNNCTT 2 cut(s) 861, 893
FaqI GGGAC 2 cut(s) 58, 301
FatI CATG 3 cut(s) 204, 1177, 1416
FbaI TGATCA 1 cut(s) 1144
FblI GTMKAC 1 cut(s) 1566
FokI GGATG 3 cut(s) 154, 213, 362
FspBI CTAG 4 cut(s) 74, 842, 902, 1334
GlaI GCGC 2 cut(s) 69, 1600
GsaI CCCAGC 1 cut(s) 1296
GsuI CTGGAG 2 cut(s) 1008, 1251
HaeIII GGCC 3 cut(s) 133, 563, 1653
HgaI GACGC 2 cut(s) 1619, 1644
HhaI GCGC 2 cut(s) 70, 1601
Hin1I GRCGYC 2 cut(s) 1386, 1611
Hin1II CATG 3 cut(s) 208, 1181, 1420
Hin6I GCGC 2 cut(s) 68, 1599
HinP1I GCGC 2 cut(s) 68, 1599
HincII GTYRAC 2 cut(s) 1012, 1567
HindII GTYRAC 2 cut(s) 1012, 1567
HindIII AAGCTT 1 cut(s) 506
HinfI GANTC 5 cut(s) 269, 367, 493, 629, 1475
HpaI GTTAAC 1 cut(s) 1012
HphI GGTGA 4 cut(s) 169, 293, 908, 1439
Hpy166II GTNNAC 5 cut(s) 358, 1012, 1175, 1450, 1567
Hpy188I TCNGA 7 cut(s) 274, 366, 591, 754, 784, 1002, 1594
Hpy188III TCNNGA 9 cut(s) 158, 205, 601, 882, 926, 1107, 1281, 1334, 1390
Hpy8I GTNNAC 5 cut(s) 358, 1012, 1175, 1450, 1567
Hpy99I CGWCG 3 cut(s) 164, 251, 1571
HpyAV CCTTC 9 cut(s) 31, 35, 319, 598, 751, 1113, 1321, 1424, 1659
HpyCH4III ACNGT 7 cut(s) 298, 795, 971, 997, 1222, 1353, 1576
HpyCH4IV ACGT 1 cut(s) 1386
HpyCH4V TGCA 9 cut(s) 16, 96, 311, 392, 815, 983, 1379, 1420, 1622
HpyF10VI GCNNNNNNNGC 8 cut(s) 98, 393, 482, 560, 983, 1529, 1541, 1619
HpySE526I ACGT 1 cut(s) 1386
Hsp92I GRCGYC 2 cut(s) 1386, 1611
Hsp92II CATG 3 cut(s) 208, 1181, 1420
HspAI GCGC 2 cut(s) 68, 1599
Ksp22I TGATCA 1 cut(s) 1144
KspAI GTTAAC 1 cut(s) 1012
LguI GCTCTTC 1 cut(s) 1195
LmnI GCTCC 5 cut(s) 216, 863, 1139, 1238, 1433
Lsp1109I GCAGC 8 cut(s) 220, 323, 472, 964, 967, 995, 1285, 1519
LweI GCATC 6 cut(s) 3, 14, 541, 802, 1171, 1366
MaeI CTAG 4 cut(s) 74, 842, 902, 1334
MaeII ACGT 1 cut(s) 1386
MaeIII GTNAC 3 cut(s) 175, 380, 1299
MbiI CCGCTC 1 cut(s) 1168
MboII GAAGA 8 cut(s) 296, 457, 971, 1169, 1212, 1222, 1525, 1591
MfeI CAATTG 2 cut(s) 405, 1287
MflI RGATCY 4 cut(s) 170, 240, 784, 961
MlsI TGGCCA 1 cut(s) 563
MluCI AATT 7 cut(s) 372, 405, 701, 717, 737, 771, 1287
MluNI TGGCCA 1 cut(s) 563
MlyI GAGTC 3 cut(s) 263, 487, 623
MmeI TCCRAC 1 cut(s) 85
Mox20I TGGCCA 1 cut(s) 563
MscI TGGCCA 1 cut(s) 563
MseI TTAA 7 cut(s) 417, 708, 729, 966, 1011, 1083, 1455
Msp20I TGGCCA 1 cut(s) 563
MspA1I CMGCKG 1 cut(s) 986
MspR9I CCNGG 2 cut(s) 612, 1230
MunI CAATTG 2 cut(s) 405, 1287
Mva1269I GAATGC 2 cut(s) 1276, 1665
MvaI CCWGG 2 cut(s) 612, 1230
MvnI CGCG 1 cut(s) 1638
MwoI GCNNNNNNNGC 8 cut(s) 98, 393, 482, 560, 983, 1529, 1541, 1619
NlaIII CATG 3 cut(s) 208, 1181, 1420
NlaIV GGNNCC 3 cut(s) 172, 609, 1500
NmuCI GTSAC 2 cut(s) 175, 1299
NspV TTCGAA 1 cut(s) 118
PagI TCATGA 1 cut(s) 204
PaqCI CACCTGC 1 cut(s) 1607
PciSI GCTCTTC 1 cut(s) 1195
PcsI WCGNNNNNNNCGW 1 cut(s) 1572
PctI GAATGC 2 cut(s) 1276, 1665
PfeI GAWTC 2 cut(s) 367, 1475
PfoI TCCNGGA 1 cut(s) 1228
Ple19I CGATCG 1 cut(s) 925
PleI GAGTC 3 cut(s) 263, 487, 623
PpsI GAGTC 3 cut(s) 263, 487, 623
Psp6I CCWGG 2 cut(s) 610, 1228
PspFI CCCAGC 1 cut(s) 1292
PspGI CCWGG 2 cut(s) 610, 1228
PspN4I GGNNCC 3 cut(s) 172, 609, 1500
PspPI GGNCC 1 cut(s) 131
PstI CTGCAG 1 cut(s) 985
PsuI RGATCY 4 cut(s) 170, 240, 784, 961
PvuI CGATCG 1 cut(s) 925
PvuII CAGCTG 1 cut(s) 986
RsaI GTAC 2 cut(s) 797, 1265
RsaNI GTAC 2 cut(s) 796, 1264
SalI GTCGAC 1 cut(s) 1565
SapI GCTCTTC 1 cut(s) 1195
SaqAI TTAA 7 cut(s) 417, 708, 729, 966, 1011, 1083, 1455
Sau96I GGNCC 1 cut(s) 131
SchI GAGTC 3 cut(s) 263, 487, 623
ScrFI CCNGG 2 cut(s) 612, 1230
SfaNI GCATC 6 cut(s) 3, 14, 541, 802, 1171, 1366
SfcI CTRYAG 3 cut(s) 294, 981, 1242
SfuI TTCGAA 1 cut(s) 118
SpeI ACTAGT 1 cut(s) 73
Sse9I AATT 7 cut(s) 372, 405, 701, 717, 737, 771, 1287
SsiI CCGC 7 cut(s) 20, 385, 1168, 1425, 1544, 1614, 1638
SspMI CTAG 4 cut(s) 74, 842, 902, 1334
StyD4I CCNGG 2 cut(s) 610, 1228
StyI CCWWGG 1 cut(s) 411
TaaI ACNGT 7 cut(s) 298, 795, 971, 997, 1222, 1353, 1576
TaiI ACGT 1 cut(s) 1389
TaqI TCGA 8 cut(s) 8, 118, 216, 249, 735, 883, 1155, 1566
TasI AATT 7 cut(s) 372, 405, 701, 717, 737, 771, 1287
TauI GCSGC 2 cut(s) 1547, 1616
TfiI GAWTC 2 cut(s) 367, 1475
Tru1I TTAA 7 cut(s) 417, 708, 729, 966, 1011, 1083, 1455
Tru9I TTAA 7 cut(s) 417, 708, 729, 966, 1011, 1083, 1455
TscAI CASTG 5 cut(s) 103, 303, 394, 1099, 1465
TseFI GTSAC 2 cut(s) 175, 1299
TseI GCWGC 8 cut(s) 233, 311, 485, 977, 980, 983, 1273, 1532
Tsp45I GTSAC 2 cut(s) 175, 1299
TspDTI ATGAA 4 cut(s) 215, 221, 1141, 1300
TspGWI ACGGA 3 cut(s) 62, 163, 1121
TspRI CASTG 5 cut(s) 103, 303, 394, 1099, 1465
XapI RAATTY 2 cut(s) 701, 717
XbaI TCTAGA 1 cut(s) 1333
XmiI GTMKAC 1 cut(s) 1566
XspI CTAG 4 cut(s) 74, 842, 902, 1334
ZraI GACGTC 1 cut(s) 1387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.