Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0004167

Physical Location & Seq

Genomic Coordinates Forward (+)

41408949 .. 41413741

Gene Structure 4793 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00115180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGGAACAGCAACCGCAGATCATACTTCTGAAGGAGGGCACGGACACCTCTCAGGGGAAGGCGCAGCTGGTGAGCAACATCAACGCCTGCACGGCCGTCGCCGACGTCGTCAGGACCACGCTCGGCCCCAGAGGCATGGACAAGCTCATTCACGACGACAAGGGCAATGTCACCATCTCCAACGACGGCGCCACCATCATGAAGTTGCTCGACATCGTTCACCCCGCCGCCAAGATCCTCGTCGACATCGCCAAGTCTCAGGACTCTGAGGTTGGTGATGGAACAACTACGGTTGTTCTGCTTGCAGGCGAGTTCTTGAAGGAGGCCAAGCCTTTCGCTTGCTCTGATCTTTCTGCATTTTGGAATTTACAGGCGATTGAGAGAATCAAGCAACTTGCTTCCAGCATTGAGGGGAAAAGCCTCGAAGAAAAGAAGGAGCTACTAGCTAACTGTGCTGCTACAACACTCTCCTCAAAGCTCATTGGCGGAGAAAAGGAGTTCTTTGCTAAAATGGTTGTCGATGCTGTCATTGCGATAGGTGATGAGGATCGTCTTAACATGATTGGAATAAAGAAGCAACCAAAAAAGTTTCTTAATCCCAAGATACTAATACTAAATATTGAGCTGGAGCTTAAATCCGAGAAAGAAAATGCTGAGATAAGATTGTCAGACCCATCGCAGTATCAGTCCATTGTTGATGCTGAATGGAATATTATTTATGACAAGCTGGATAAGTGTGTGCAGAGTGGGGCCAAAGTTGTTCTTTCACGGTTGGCTATTGGTGATCTAGCAACACAGTATTTTGCAGATCGAGATATATTCTGTGCTGGCCGTGTAGCTGAAGAAGATCTGCAAAGGGTAGCTGCTGCCACTGGTGGCACTGTGCAGACATCCATCAATGATGTTATTGATGAGGTCCTTGGAACATGCGAATGTTTTGAAGAAAAACAAGTTGGAAATGAGAGGTTTAATATCTTTAGTGGATGCCCATCTGGTAGGACTGCCACAATTGTTCTTCGCGGTGGAGCTGATCAGTTCATTGAGGAAGCTGAGCGTAGTTTACATGATGCAATCATGATTGTTAGAAGGGCTTTAAAGAATTCAACTGTAGTTCCTGGTGGTGGTGCTATAGATATGGAGATCAGCCGTTACTTGAGGGACAAAGCGCGTGAAATTGCTGGGAGGTCTCAGTTTTTCATCAACTCATATGCAAAAGCTCTGGAGGTTATCCCACGACAACTATGTGACAATGCGGGATTTGACGCGACTGATATGCTAAACAAACTAAGACAGAAACACTCGACAAGTGGGGGTGCACCGTATGGAGTTGACATTAACACCGGAGGAATTGCTGATTCATATGCTAACTTTGTCTGGGAGCCAGCAGTTGTAAAGATCAATGCTATAAATGCTGCTACTGAGGCTGCTTGCCTTGTTTTAAGTGTTGACGAGACGGTGAAAAATCCAAAGTCTGAGAGTGCCCAGGGAGATGCTGCTGCTGGTGCCATGGGAGGTAGAGGGCGTGGAGGAGCTGCTTTTCGTGGACGTGGTCGTGGAATGCGAAGACGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002199 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005832 GO:0005856 GO:0005874 GO:0006457 GO:0006458 GO:0006810 GO:0007338 GO:0007339 GO:0008037 GO:0008150 GO:0009566 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009988 GO:0010035 GO:0010038 GO:0010556 GO:0010557 GO:0010604 GO:0010638 GO:0015630 GO:0019219 GO:0019222 GO:0019953 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031647 GO:0032204 GO:0032206 GO:0032210 GO:0032212 GO:0032879 GO:0032880 GO:0032991 GO:0033043 GO:0033044 GO:0035036 GO:0042221 GO:0042802 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044183 GO:0044297 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0044703 GO:0045935 GO:0046686 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050821 GO:0050896 GO:0051052 GO:0051054 GO:0051082 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051704 GO:0060255 GO:0060341 GO:0061077 GO:0065007 GO:0065008 GO:0070201 GO:0070202 GO:0070203 GO:0080090 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0101031 GO:1901998 GO:1903827 GO:1903829 GO:1904356 GO:1904358 GO:1904814 GO:1904816 GO:1904851 GO:1904951 GO:2000112 GO:2000278 GO:2000573 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cpn60_TCP1

Protein Analysis

523

Amino Acids

56.43

Weight (kDa)

5.51

Isoelectric Point (pI)

40.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cpn60_TCP1	PF00118	33 - 195	9.1e-48	TCP-1/cpn60 chaperonin family
Cpn60_TCP1	PF00118	192 - 488	9.3e-93	TCP-1/cpn60 chaperonin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004167)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11830 AT3G11830
fragaria_vesca	FvH4_3g27240 FvH4_3g27240 FvH4_3g27240 FvH4_3g27240
malus_domestica	MD03G1164100.v1.1
prunus_persica	Prupe.6G154400_v2.0.a1 Prupe.6G154400_v2.0.a1
pyrus_communis	pycom11g15670 pycom12499g00060
rosa_chinensis	RchiOBHm_Chr2g0128841 RchiOBHm_Chr5g0049871
rosa_laevigata	RLG00000019032 RLG00000034659
rosa_multiflora	Rmu_sc0007061.1_g000001 Rmu_sc0008387.1_g000010 Rmu_sc0035081.1_g000001
rosa_roxburghii	Rroxscaffold_1G00031490 Rroxscaffold_2G00115180
rosa_rugosa	Rorug02G0281600 Rorug02G0281700 Rorug05G0253500
rosa_samantha	Rh2AG334200 Rh2BG342200 Rh2CG321100 Rh2DG358900 Rh5AG328400 Rh5BG338900 Rh5CG364600 Rh5DG351300
rosa_wichuraiana	Rw2G027020 Rw5G031010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	108
AccB1I	GGYRCC	2 cut(s)	188, 1502
AccI	GTMKAC	1 cut(s)	243
AccII	CGCG	3 cut(s)	1020, 1168, 1265
AciI	CCGC	6 cut(s)	14, 225, 228, 486, 1020, 1253
AclWI	GGATC	2 cut(s)	229, 555
AcoI	YGGCCR	2 cut(s)	93, 829
AcsI	RAATTY	2 cut(s)	364, 1099
AcuI	CTGAAG	2 cut(s)	50, 861
AcyI	GRCGYC	2 cut(s)	105, 189
AfiI	CCNNNNNNNGG	2 cut(s)	54, 1121
AgsI	TTSAA	3 cut(s)	319, 941, 1104
AjiI	CACGTC	1 cut(s)	1547
AjnI	CCWGG	2 cut(s)	1114, 1482
AjuI	GAANNNNNNNTTGG	2 cut(s)	936, 968
Alw21I	GWGCWC	1 cut(s)	1318
Alw26I	GTCTC	3 cut(s)	261, 1191, 1445
Alw44I	GTGCAC	1 cut(s)	1314
AlwI	GGATC	2 cut(s)	229, 555
AoxI	GGCC	5 cut(s)	93, 124, 324, 750, 829
ApaLI	GTGCAC	1 cut(s)	1314
ApeKI	GCWGC	9 cut(s)	64, 455, 863, 866, 1412, 1424, 1493, 1496, 1532
ApoI	RAATTY	2 cut(s)	364, 1099
AspLEI	GCGC	3 cut(s)	64, 191, 1168
AspS9I	GGNCC	4 cut(s)	114, 125, 750, 916
AsuHPI	GGTGA	7 cut(s)	82, 163, 212, 287, 551, 794, 1468
AvaII	GGWCC	2 cut(s)	114, 916
BaeGI	GKGCMC	3 cut(s)	41, 1318, 1483
BanI	GGYRCC	2 cut(s)	188, 1502
Bbv12I	GWGCWC	1 cut(s)	1318
BbvI	GCAGC	9 cut(s)	76, 442, 850, 853, 1399, 1411, 1480, 1483, 1519
BccI	CCATC	6 cut(s)	182, 203, 272, 682, 902, 997
BceAI	ACGGC	5 cut(s)	80, 108, 202, 816, 1131
BcgI	CGANNNNNNTGC	4 cut(s)	79, 113, 1255, 1289
BciT130I	CCWGG	2 cut(s)	1116, 1484
BclI	TGATCA	1 cut(s)	1030
BcoDI	GTCTC	3 cut(s)	261, 1191, 1445
BfaI	CTAG	2 cut(s)	443, 788
BfmI	CTRYAG	2 cut(s)	1107, 1128
BfoI	RGCGCY	1 cut(s)	192
BglI	GCCNNNNNGGC	2 cut(s)	92, 132
BglII	AGATCT	1 cut(s)	847
BlpI	GCTNAGC	1 cut(s)	1050
Bme1390I	CCNGG	2 cut(s)	1116, 1484
Bme18I	GGWCC	2 cut(s)	114, 916
BmgBI	CACGTC	1 cut(s)	1547
BmgT120I	GGNCC	4 cut(s)	114, 125, 750, 916
BmiI	GGNNCC	5 cut(s)	127, 190, 751, 1380, 1504
BmrFI	CCNGG	2 cut(s)	1116, 1484
BmsI	GCATC	5 cut(s)	511, 688, 974, 1057, 1480
BpmI	CTGGAG	2 cut(s)	647, 1241
Bpu1102I	GCTNAGC	1 cut(s)	1050
BpuEI	CTTGAG	1 cut(s)	1174
BsaBI	GATNNNNATC	2 cut(s)	546, 988
BsaHI	GRCGYC	2 cut(s)	105, 189
BsaI	GGTCTC	1 cut(s)	1191
BsaJI	CCNNGG	4 cut(s)	919, 1482, 1483, 1506
BsaWI	WCCGGW	1 cut(s)	1340
Bsc4I	CCNNNNNNNGG	2 cut(s)	54, 1121
Bse1I	ACTGG	1 cut(s)	877
Bse3DI	GCAATG	2 cut(s)	172, 528
Bse8I	GATNNNNATC	2 cut(s)	546, 988
BseBI	CCWGG	2 cut(s)	1116, 1484
BseDI	CCNNGG	4 cut(s)	919, 1482, 1483, 1506
BseGI	GGATG	2 cut(s)	890, 989
BseJI	GATNNNNATC	2 cut(s)	546, 988
BseLI	CCNNNNNNNGG	2 cut(s)	54, 1121
BseMI	GCAATG	2 cut(s)	172, 528
BseMII	CTCAG	8 cut(s)	65, 258, 272, 645, 1041, 1202, 1410, 1464
BseNI	ACTGG	1 cut(s)	877
BseRI	GAGGAG	2 cut(s)	460, 1542
BseSI	GKGCMC	3 cut(s)	41, 1318, 1483
BseX3I	CGGCCG	1 cut(s)	93
BseXI	GCAGC	9 cut(s)	76, 442, 850, 853, 1399, 1411, 1480, 1483, 1519
BseYI	CCCAGC	1 cut(s)	1178
BsgI	GTGCAG	3 cut(s)	73, 761, 905
Bsh1236I	CGCG	3 cut(s)	1020, 1168, 1265
Bsh1285I	CGRYCG	1 cut(s)	96
BshFI	GGCC	5 cut(s)	95, 126, 326, 752, 831
BshNI	GGYRCC	2 cut(s)	188, 1502
BsiEI	CGRYCG	1 cut(s)	96
BsiHKAI	GWGCWC	1 cut(s)	1318
BsiSI	CCGG	1 cut(s)	1341
BslFI	GGGAC	1 cut(s)	1172
BslI	CCNNNNNNNGG	2 cut(s)	54, 1121
BsmAI	GTCTC	3 cut(s)	261, 1191, 1445
BsmBI	CGTCTC	1 cut(s)	1445
BsmFI	GGGAC	1 cut(s)	1172
BsmI	GAATGC	1 cut(s)	1563
BsnI	GGCC	5 cut(s)	95, 126, 326, 752, 831
Bso31I	GGTCTC	1 cut(s)	1191
Bsp1286I	GDGCHC	3 cut(s)	41, 1318, 1483
Bsp1720I	GCTNAGC	1 cut(s)	1050
Bsp19I	CCATGG	1 cut(s)	1506
BspACI	CCGC	6 cut(s)	14, 225, 228, 486, 1020, 1253
BspANI	GGCC	5 cut(s)	95, 126, 326, 752, 831
BspCNI	CTCAG	8 cut(s)	64, 259, 271, 646, 1042, 1201, 1411, 1465
BspFNI	CGCG	3 cut(s)	1020, 1168, 1265
BspHI	TCATGA	2 cut(s)	198, 1074
BspLI	GGNNCC	5 cut(s)	127, 190, 751, 1380, 1504
BspPI	GGATC	2 cut(s)	229, 555
BspT107I	GGYRCC	2 cut(s)	188, 1502
BspTNI	GGTCTC	1 cut(s)	1191
BsrDI	GCAATG	2 cut(s)	172, 528
BsrI	ACTGG	1 cut(s)	877
BssECI	CCNNGG	4 cut(s)	919, 1482, 1483, 1506
BssNI	GRCGYC	2 cut(s)	105, 189
BssT1I	CCWWGG	2 cut(s)	919, 1506
Bst2UI	CCWGG	2 cut(s)	1116, 1484
Bst4CI	ACNGT	8 cut(s)	292, 452, 771, 798, 883, 1108, 1320, 1456
BstACI	GRCGYC	2 cut(s)	105, 189
BstC8I	GCNNGC	7 cut(s)	88, 303, 307, 340, 829, 1383, 1429
BstDEI	CTNAG	9 cut(s)	51, 258, 267, 654, 1050, 1188, 1286, 1419, 1473
BstDSI	CCRYGG	1 cut(s)	1506
BstF5I	GGATG	2 cut(s)	890, 989
BstFNI	CGCG	3 cut(s)	1020, 1168, 1265
BstH2I	RGCGCY	1 cut(s)	192
BstHHI	GCGC	3 cut(s)	64, 191, 1168
BstMAI	GTCTC	3 cut(s)	261, 1191, 1445
BstMCI	CGRYCG	1 cut(s)	96
BstMWI	GCNNNNNNNGC	7 cut(s)	92, 132, 452, 530, 1409, 1421, 1502
BstNI	CCWGG	2 cut(s)	1116, 1484
BstNSI	RCATGY	1 cut(s)	930
BstSCI	CCNGG	2 cut(s)	1114, 1482
BstSFI	CTRYAG	2 cut(s)	1107, 1128
BstSLI	GKGCMC	3 cut(s)	41, 1318, 1483
BstUI	CGCG	3 cut(s)	1020, 1168, 1265
BstV1I	GCAGC	9 cut(s)	76, 442, 850, 853, 1399, 1411, 1480, 1483, 1519
BstX2I	RGATCY	2 cut(s)	234, 847
BstXI	CCANNNNNNTGG	1 cut(s)	136
BstYI	RGATCY	2 cut(s)	234, 847
BstZI	CGGCCG	1 cut(s)	93
BsuRI	GGCC	5 cut(s)	95, 126, 326, 752, 831
BtgI	CCRYGG	1 cut(s)	1506
BtgZI	GCGATG	2 cut(s)	232, 660
BtrI	CACGTC	1 cut(s)	1547
BtsCI	GGATG	2 cut(s)	890, 989
BtsIMutI	CAGTG	2 cut(s)	870, 879
Cac8I	GCNNGC	7 cut(s)	88, 303, 307, 340, 829, 1383, 1429
CciI	TCATGA	2 cut(s)	198, 1074
CfoI	GCGC	3 cut(s)	64, 191, 1168
Cfr13I	GGNCC	4 cut(s)	114, 125, 750, 916
CseI	GACGC	1 cut(s)	1271
CviAII	CATG	7 cut(s)	136, 199, 559, 927, 1064, 1075, 1507
DdeI	CTNAG	9 cut(s)	51, 258, 267, 654, 1050, 1188, 1286, 1419, 1473
DinI	GGCGCC	1 cut(s)	190
DraI	TTTAAA	1 cut(s)	1095
EaeI	YGGCCR	2 cut(s)	93, 829
EagI	CGGCCG	1 cut(s)	93
EciI	GGCGGA	1 cut(s)	501
EclXI	CGGCCG	1 cut(s)	93
Eco130I	CCWWGG	2 cut(s)	919, 1506
Eco31I	GGTCTC	1 cut(s)	1191
Eco47I	GGWCC	2 cut(s)	114, 916
Eco52I	CGGCCG	1 cut(s)	93
Eco57I	CTGAAG	2 cut(s)	50, 861
EcoO109I	RGGNCCY	1 cut(s)	916
EcoRI	GAATTC	1 cut(s)	1099
EcoRII	CCWGG	2 cut(s)	1114, 1482
EcoT14I	CCWWGG	2 cut(s)	919, 1506
EgeI	GGCGCC	1 cut(s)	190
EheI	GGCGCC	1 cut(s)	190
ErhI	CCWWGG	2 cut(s)	919, 1506
Esp3I	CGTCTC	1 cut(s)	1445
FaeI	CATG	7 cut(s)	139, 202, 562, 930, 1067, 1078, 1510
FalI	AAGNNNNNCTT	4 cut(s)	485, 517, 747, 779
FaqI	GGGAC	1 cut(s)	1172
FatI	CATG	7 cut(s)	135, 198, 558, 926, 1063, 1074, 1506
FauI	CCCGC	2 cut(s)	232, 1246
FauNDI	CATATG	2 cut(s)	1207, 1360
FbaI	TGATCA	1 cut(s)	1030
FblI	GTMKAC	1 cut(s)	243
FokI	GGATG	2 cut(s)	877, 996
FspBI	CTAG	2 cut(s)	443, 788
GlaI	GCGC	3 cut(s)	63, 190, 1167
GsaI	CCCAGC	1 cut(s)	1182
GsuI	CTGGAG	2 cut(s)	647, 1241
HaeII	RGCGCY	1 cut(s)	192
HaeIII	GGCC	5 cut(s)	95, 126, 326, 752, 831
HapII	CCGG	1 cut(s)	1341
HgaI	GACGC	1 cut(s)	1271
HhaI	GCGC	3 cut(s)	64, 191, 1168
Hin1I	GRCGYC	2 cut(s)	105, 189
Hin1II	CATG	7 cut(s)	139, 202, 562, 930, 1067, 1078, 1510
Hin6I	GCGC	3 cut(s)	62, 189, 1166
HinP1I	GCGC	3 cut(s)	62, 189, 1166
HincII	GTYRAC	3 cut(s)	244, 1330, 1447
HindII	GTYRAC	3 cut(s)	244, 1330, 1447
HinfI	GANTC	3 cut(s)	263, 384, 1355
HpaII	CCGG	1 cut(s)	1341
HphI	GGTGA	7 cut(s)	82, 163, 212, 287, 551, 794, 1468
Hpy166II	GTNNAC	7 cut(s)	220, 244, 1061, 1316, 1330, 1447, 1544
Hpy188I	TCNGA	6 cut(s)	30, 268, 346, 640, 670, 1474
Hpy188III	TCNNGA	8 cut(s)	112, 152, 199, 260, 316, 812, 1075, 1220
Hpy8I	GTNNAC	7 cut(s)	220, 244, 1061, 1316, 1330, 1447, 1544
Hpy99I	CGWCG	6 cut(s)	101, 107, 110, 158, 188, 245
HpyAV	CCTTC	5 cut(s)	25, 52, 313, 427, 1080
HpyCH4III	ACNGT	8 cut(s)	292, 452, 771, 798, 883, 1108, 1320, 1456
HpyCH4IV	ACGT	2 cut(s)	105, 1546
HpyF10VI	GCNNNNNNNGC	7 cut(s)	92, 132, 452, 530, 1409, 1421, 1502
HpyF3I	CTNAG	9 cut(s)	51, 258, 267, 654, 1050, 1188, 1286, 1419, 1473
HpySE526I	ACGT	2 cut(s)	105, 1546
Hsp92I	GRCGYC	2 cut(s)	105, 189
Hsp92II	CATG	7 cut(s)	139, 202, 562, 930, 1067, 1078, 1510
HspAI	GCGC	3 cut(s)	62, 189, 1166
KasI	GGCGCC	1 cut(s)	188
Ksp22I	TGATCA	1 cut(s)	1030
LmnI	GCTCC	5 cut(s)	436, 628, 1025, 1378, 1529
Lsp1109I	GCAGC	9 cut(s)	76, 442, 850, 853, 1399, 1411, 1480, 1483, 1519
LweI	GCATC	5 cut(s)	511, 688, 974, 1057, 1480
MaeI	CTAG	2 cut(s)	443, 788
MaeII	ACGT	2 cut(s)	105, 1546
MaeIII	GTNAC	3 cut(s)	169, 1148, 1244
MboII	GAAGA	5 cut(s)	437, 854, 857, 953, 1007
MfeI	CAATTG	1 cut(s)	1008
MflI	RGATCY	2 cut(s)	234, 847
MhlI	GDGCHC	3 cut(s)	41, 1318, 1483
MluCI	AATT	5 cut(s)	364, 1008, 1099, 1173, 1347
Mly113I	GGCGCC	1 cut(s)	189
MlyI	GAGTC	1 cut(s)	257
MmeI	TCCRAC	2 cut(s)	204, 934
MseI	TTAA	7 cut(s)	555, 594, 633, 969, 1094, 1335, 1439
MslI	CAYNNNNRTG	2 cut(s)	197, 931
MspA1I	CMGCKG	1 cut(s)	67
MspI	CCGG	1 cut(s)	1341
MspR9I	CCNGG	2 cut(s)	1116, 1484
MunI	CAATTG	1 cut(s)	1008
Mva1269I	GAATGC	1 cut(s)	1563
MvaI	CCWGG	2 cut(s)	1116, 1484
MvnI	CGCG	3 cut(s)	1020, 1168, 1265
MwoI	GCNNNNNNNGC	7 cut(s)	92, 132, 452, 530, 1409, 1421, 1502
NarI	GGCGCC	1 cut(s)	189
NcoI	CCATGG	1 cut(s)	1506
NdeI	CATATG	2 cut(s)	1207, 1360
NlaIII	CATG	7 cut(s)	139, 202, 562, 930, 1067, 1078, 1510
NlaIV	GGNNCC	5 cut(s)	127, 190, 751, 1380, 1504
NmeAIII	GCCGAG	1 cut(s)	102
NmuCI	GTSAC	2 cut(s)	169, 1244
NspI	RCATGY	1 cut(s)	930
PagI	TCATGA	2 cut(s)	198, 1074
PasI	CCCWGGG	1 cut(s)	1483
PcsI	WCGNNNNNNNCGW	2 cut(s)	105, 1558
PctI	GAATGC	1 cut(s)	1563
PfeI	GAWTC	2 cut(s)	384, 1355
PflFI	GACNNNGTC	2 cut(s)	107, 1548
PleI	GAGTC	1 cut(s)	257
PluTI	GGCGCC	1 cut(s)	192
PpsI	GAGTC	1 cut(s)	257
PpuMI	RGGWCCY	1 cut(s)	916
Psp5II	RGGWCCY	1 cut(s)	916
Psp6I	CCWGG	2 cut(s)	1114, 1482
PspFI	CCCAGC	1 cut(s)	1178
PspGI	CCWGG	2 cut(s)	1114, 1482
PspN4I	GGNNCC	5 cut(s)	127, 190, 751, 1380, 1504
PspPI	GGNCC	4 cut(s)	114, 125, 750, 916
PspPPI	RGGWCCY	1 cut(s)	916
PsuI	RGATCY	2 cut(s)	234, 847
PsyI	GACNNNGTC	2 cut(s)	107, 1548
PvuII	CAGCTG	1 cut(s)	67
RseI	CAYNNNNRTG	2 cut(s)	197, 931
SalI	GTCGAC	1 cut(s)	242
SaqAI	TTAA	7 cut(s)	555, 594, 633, 969, 1094, 1335, 1439
Sau96I	GGNCC	4 cut(s)	114, 125, 750, 916
SchI	GAGTC	1 cut(s)	257
ScrFI	CCNGG	2 cut(s)	1116, 1484
SduI	GDGCHC	3 cut(s)	41, 1318, 1483
SfaNI	GCATC	5 cut(s)	511, 688, 974, 1057, 1480
SfcI	CTRYAG	2 cut(s)	1107, 1128
SfoI	GGCGCC	1 cut(s)	190
SinI	GGWCC	2 cut(s)	114, 916
SmiMI	CAYNNNNRTG	2 cut(s)	197, 931
SmlI	CTYRAG	1 cut(s)	1153
SmoI	CTYRAG	1 cut(s)	1153
Sse9I	AATT	5 cut(s)	364, 1008, 1099, 1173, 1347
SsiI	CCGC	6 cut(s)	14, 225, 228, 486, 1020, 1253
SspDI	GGCGCC	1 cut(s)	188
SspI	AATATT	2 cut(s)	619, 712
SspMI	CTAG	2 cut(s)	443, 788
StyD4I	CCNGG	2 cut(s)	1114, 1482
StyI	CCWWGG	2 cut(s)	919, 1506
TaaI	ACNGT	8 cut(s)	292, 452, 771, 798, 883, 1108, 1320, 1456
TaiI	ACGT	2 cut(s)	108, 1549
TaqI	TCGA	6 cut(s)	210, 243, 423, 519, 811, 1301
TasI	AATT	5 cut(s)	364, 1008, 1099, 1173, 1347
TauI	GCSGC	1 cut(s)	230
TfiI	GAWTC	2 cut(s)	384, 1355
Tru1I	TTAA	7 cut(s)	555, 594, 633, 969, 1094, 1335, 1439
Tru9I	TTAA	7 cut(s)	555, 594, 633, 969, 1094, 1335, 1439
TscAI	CASTG	2 cut(s)	877, 886
TseFI	GTSAC	2 cut(s)	169, 1244
TseI	GCWGC	9 cut(s)	64, 455, 863, 866, 1412, 1424, 1493, 1496, 1532
Tsp45I	GTSAC	2 cut(s)	169, 1244
TspDTI	ATGAA	4 cut(s)	215, 1027, 1186, 1347
TspGWI	ACGGA	1 cut(s)	56
TspRI	CASTG	2 cut(s)	877, 886
Tth111I	GACNNNGTC	2 cut(s)	107, 1548
VneI	GTGCAC	1 cut(s)	1314
VpaK11BI	GGWCC	2 cut(s)	114, 916
XapI	RAATTY	2 cut(s)	364, 1099
XceI	RCATGY	1 cut(s)	930
XmiI	GTMKAC	1 cut(s)	243
XspI	CTAG	2 cut(s)	443, 788
ZraI	GACGTC	1 cut(s)	106

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.