Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0004167

Physical Location & Seq

Genomic Coordinates Reverse (-)

42083603 .. 42088316

Gene Structure 4714 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G027020.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGGCGAGTATGATGCAACCGCAGATCATACTTCTGAAGGAGGGCACGGACACCTCTCAGGGGAAGGCGCAGCTGGTGAGCAACATCAACGCCTGCACGGCCGTCGCCGACGTCGTCAGGACCACGCTCGGCCCCAGAGGCATGGACAAGCTCATTCACGACGACAAGGGCAATGTCACCATCTCCAACGACGGCGCCACCATCATGAAGTTGCTCGACATCGTTCACCCCGCCGCCAAGATCCTCGTCGACATCGCCAAGTCTCAGGACTCTGAGGTTGGTGATGGAACAACTACGGTTGTTCTGCTTGCAGGCGAGTTCTTGAAGGAGGCCAAGCCTTTCGTAGAGGATGGGGTGCACCCGCAGAATTTGATCAGGAGTTATCGAACCGCTAGCTATTTGGCGATTGAGAGAATCAAGCAACTTGCTTCCAGCATTGAGGGGAAAAGCCTCGAAGAGAAGAAGGAGCTACTAGCTAACTGTGCTGCTACAACACTCTCCTCAAAGCTCATTGGCGGAGAAAAGGAGTTCTTTGCTAAAATGGTTGTCGATGCTGTCATTGCGATAGGTGATGAGGATCGTCTTAACATGATTGGAATAAAGAAGGTTTCTGGTGGTAACATGCGTGATTCCTTTCTAGTAAATGGCGTTGCCTTTAAAAAGACATTCTCTTATGCCGGTTTTGAACAGCAACCAAAAAAGTTTCTTAATCCCAAGATACTAATACTAAATATTGAACTGGAGCTTAAATCCGAGAAAGAAAATGCTGAGATAAGATTGTCAGACCCATCGCAGTATCAGTCCATTGTTGATGCTGAATGGAATATTATTTATGACAAGCTGGATAAGTGTGTGCAGAGTGGGGCCAAAGTTGTTCTTTCACGGTTGGCTATTGGTGATCTAGCAACACAGTATTTTGCAGATCGAGATATATTCTGTGCTGGCCGTGTAGCTGAAGAAGATCTGCAAAGGGTAGCTGCTGCCACTGGTGGCACTGTGCAGACATCCATCAATGATGTTATTGATGAGGTCCTTGGAACATGCGAATGTTTTGAAGAAAAGCAAGTTGGAAATGAGAGGTTTAATATCTTTAGTGGATGCCCATCTGGTAGGACTGCCACAATTGTTCTTCGCGGTGGAGCTGATCAGTTCATTGAGGAAGCTGAGCGTAGTTTACATGATGCGATCATGATTGTTAGAAGGGCTTTAAAGAATTCAACTGTGGTTCCTGGTGGTGGTGCTATAGATATGGAGATCAGCCGTTACTTGAGGGACAAAGCGCGTGAAATTGCTGGGAGGTCTCAGTTTTTCATCAACTCATACGCAAAAGCTCTGGAGGTTATCCCACGACAACTATGTGACAATGCAGGATTTGACGCGACTGATATGCTAAACAAACTAAGACAGAAACACTCGACGGGTGGGGGTGCACCTTACGGAGTTGACATTAACACCGGAGGAATTGCTGATTCGTTTGCTAACTTTGTCTGGGAGCCAGCAGTTGTAAAGATCAATGCCATAAATGCTGCTACTGAGGCTGCTTGCCTTGTTTTAAGTGTTGACGAGACGGTGAAAAATCCAAAGTCTGAGAGTGCCCAGGGAGATGCTGCTGCTGGTGCCATGGGAGGTAGAGGGCGTGGAGGAGCTGCTTTTCGTGGACGTGGTCGTGGAATGCGAAGACGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002199 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005832 GO:0005856 GO:0005874 GO:0006457 GO:0006458 GO:0006810 GO:0007338 GO:0007339 GO:0008037 GO:0008150 GO:0009566 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009988 GO:0010035 GO:0010038 GO:0010556 GO:0010557 GO:0010604 GO:0010638 GO:0015630 GO:0019219 GO:0019222 GO:0019953 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031647 GO:0032204 GO:0032206 GO:0032210 GO:0032212 GO:0032879 GO:0032880 GO:0032991 GO:0033043 GO:0033044 GO:0035036 GO:0042221 GO:0042802 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044183 GO:0044297 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0044703 GO:0045935 GO:0046686 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050821 GO:0050896 GO:0051052 GO:0051054 GO:0051082 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051704 GO:0060255 GO:0060341 GO:0061077 GO:0065007 GO:0065008 GO:0070201 GO:0070202 GO:0070203 GO:0080090 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0101031 GO:1901998 GO:1903827 GO:1903829 GO:1904356 GO:1904358 GO:1904814 GO:1904816 GO:1904851 GO:1904951 GO:2000112 GO:2000278 GO:2000573 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cpn60_TCP1

Protein Analysis

561

Amino Acids

60.55

Weight (kDa)

5.96

Isoelectric Point (pI)

37.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cpn60_TCP1	PF00118	35 - 526	8.6e-166	TCP-1/cpn60 chaperonin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004167)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11830 AT3G11830
fragaria_vesca	FvH4_3g27240 FvH4_3g27240 FvH4_3g27240 FvH4_3g27240
malus_domestica	MD03G1164100.v1.1
prunus_persica	Prupe.6G154400_v2.0.a1 Prupe.6G154400_v2.0.a1
pyrus_communis	pycom11g15670 pycom12499g00060
rosa_chinensis	RchiOBHm_Chr2g0128841 RchiOBHm_Chr5g0049871
rosa_laevigata	RLG00000019032 RLG00000034659
rosa_multiflora	Rmu_sc0007061.1_g000001 Rmu_sc0008387.1_g000010 Rmu_sc0035081.1_g000001
rosa_roxburghii	Rroxscaffold_1G00031490 Rroxscaffold_2G00115180
rosa_rugosa	Rorug02G0281600 Rorug02G0281700 Rorug05G0253500
rosa_samantha	Rh2AG334200 Rh2BG342200 Rh2CG321100 Rh2DG358900 Rh5AG328400 Rh5BG338900 Rh5CG364600 Rh5DG351300
rosa_wichuraiana	Rw2G027020 Rw5G031010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	114
AccB1I	GGYRCC	2 cut(s)	194, 1616
AccI	GTMKAC	1 cut(s)	249
AccII	CGCG	3 cut(s)	1134, 1282, 1379
AciI	CCGC	7 cut(s)	20, 231, 234, 362, 390, 516, 1134
AclWI	GGATC	2 cut(s)	235, 585
AcoI	YGGCCR	2 cut(s)	99, 943
AcsI	RAATTY	2 cut(s)	367, 1213
AcuI	CTGAAG	2 cut(s)	56, 975
AcyI	GRCGYC	2 cut(s)	111, 195
AfiI	CCNNNNNNNGG	2 cut(s)	60, 1235
AgsI	TTSAA	5 cut(s)	325, 686, 737, 1055, 1218
AjiI	CACGTC	1 cut(s)	1661
AjnI	CCWGG	2 cut(s)	1228, 1596
AjuI	GAANNNNNNNTTGG	2 cut(s)	1050, 1082
Alw21I	GWGCWC	2 cut(s)	360, 1432
Alw26I	GTCTC	3 cut(s)	267, 1305, 1559
Alw44I	GTGCAC	2 cut(s)	356, 1428
AlwI	GGATC	2 cut(s)	235, 585
AoxI	GGCC	5 cut(s)	99, 130, 330, 864, 943
ApaLI	GTGCAC	2 cut(s)	356, 1428
ApeKI	GCWGC	9 cut(s)	70, 485, 977, 980, 1526, 1538, 1607, 1610, 1646
ApoI	RAATTY	2 cut(s)	367, 1213
AspLEI	GCGC	3 cut(s)	70, 197, 1282
AspS9I	GGNCC	4 cut(s)	120, 131, 864, 1030
AsuHPI	GGTGA	7 cut(s)	88, 169, 218, 293, 581, 908, 1582
AsuNHI	GCTAGC	1 cut(s)	392
AvaII	GGWCC	2 cut(s)	120, 1030
BaeGI	GKGCMC	4 cut(s)	47, 360, 1432, 1597
BanI	GGYRCC	2 cut(s)	194, 1616
Bbv12I	GWGCWC	2 cut(s)	360, 1432
BbvI	GCAGC	9 cut(s)	82, 472, 964, 967, 1513, 1525, 1594, 1597, 1633
BccI	CCATC	7 cut(s)	188, 209, 278, 344, 796, 1016, 1111
BceAI	ACGGC	5 cut(s)	86, 114, 208, 930, 1245
BcgI	CGANNNNNNTGC	5 cut(s)	29, 85, 119, 1369, 1403
BciT130I	CCWGG	2 cut(s)	1230, 1598
BclI	TGATCA	2 cut(s)	372, 1144
BcoDI	GTCTC	3 cut(s)	267, 1305, 1559
BfaI	CTAG	4 cut(s)	393, 473, 638, 902
BfmI	CTRYAG	1 cut(s)	1242
BfoI	RGCGCY	1 cut(s)	198
BglI	GCCNNNNNGGC	2 cut(s)	98, 138
BglII	AGATCT	1 cut(s)	961
BlpI	GCTNAGC	1 cut(s)	1164
Bme1390I	CCNGG	2 cut(s)	1230, 1598
Bme18I	GGWCC	2 cut(s)	120, 1030
BmgBI	CACGTC	1 cut(s)	1661
BmgT120I	GGNCC	4 cut(s)	120, 131, 864, 1030
BmiI	GGNNCC	6 cut(s)	133, 196, 865, 1227, 1494, 1618
BmrFI	CCNGG	2 cut(s)	1230, 1598
BmsI	GCATC	6 cut(s)	3, 541, 802, 1088, 1171, 1594
BmtI	GCTAGC	1 cut(s)	396
BpmI	CTGGAG	2 cut(s)	761, 1355
Bpu1102I	GCTNAGC	1 cut(s)	1164
BpuEI	CTTGAG	1 cut(s)	1288
BsaBI	GATNNNNATC	2 cut(s)	576, 1102
BsaHI	GRCGYC	2 cut(s)	111, 195
BsaI	GGTCTC	1 cut(s)	1305
BsaJI	CCNNGG	4 cut(s)	1033, 1596, 1597, 1620
BsaWI	WCCGGW	1 cut(s)	1454
Bsc4I	CCNNNNNNNGG	2 cut(s)	60, 1235
Bse118I	RCCGGY	1 cut(s)	677
Bse1I	ACTGG	2 cut(s)	744, 991
Bse3DI	GCAATG	2 cut(s)	178, 558
Bse8I	GATNNNNATC	2 cut(s)	576, 1102
BseBI	CCWGG	2 cut(s)	1230, 1598
BseDI	CCNNGG	4 cut(s)	1033, 1596, 1597, 1620
BseGI	GGATG	3 cut(s)	355, 1004, 1103
BseJI	GATNNNNATC	2 cut(s)	576, 1102
BseLI	CCNNNNNNNGG	2 cut(s)	60, 1235
BseMI	GCAATG	2 cut(s)	178, 558
BseMII	CTCAG	8 cut(s)	71, 264, 278, 759, 1155, 1316, 1524, 1578
BseNI	ACTGG	2 cut(s)	744, 991
BseRI	GAGGAG	2 cut(s)	490, 1656
BseSI	GKGCMC	4 cut(s)	47, 360, 1432, 1597
BseX3I	CGGCCG	1 cut(s)	99
BseXI	GCAGC	9 cut(s)	82, 472, 964, 967, 1513, 1525, 1594, 1597, 1633
BseYI	CCCAGC	1 cut(s)	1292
BsgI	GTGCAG	3 cut(s)	79, 875, 1019
Bsh1236I	CGCG	3 cut(s)	1134, 1282, 1379
Bsh1285I	CGRYCG	1 cut(s)	102
BshFI	GGCC	5 cut(s)	101, 132, 332, 866, 945
BshNI	GGYRCC	2 cut(s)	194, 1616
BsiEI	CGRYCG	1 cut(s)	102
BsiHKAI	GWGCWC	2 cut(s)	360, 1432
BsiSI	CCGG	2 cut(s)	678, 1455
BslFI	GGGAC	1 cut(s)	1286
BslI	CCNNNNNNNGG	2 cut(s)	60, 1235
BsmAI	GTCTC	3 cut(s)	267, 1305, 1559
BsmBI	CGTCTC	1 cut(s)	1559
BsmFI	GGGAC	1 cut(s)	1286
BsmI	GAATGC	1 cut(s)	1677
BsnI	GGCC	5 cut(s)	101, 132, 332, 866, 945
Bso31I	GGTCTC	1 cut(s)	1305
Bsp1286I	GDGCHC	4 cut(s)	47, 360, 1432, 1597
Bsp1720I	GCTNAGC	1 cut(s)	1164
Bsp19I	CCATGG	1 cut(s)	1620
BspACI	CCGC	7 cut(s)	20, 231, 234, 362, 390, 516, 1134
BspANI	GGCC	5 cut(s)	101, 132, 332, 866, 945
BspCNI	CTCAG	8 cut(s)	70, 265, 277, 760, 1156, 1315, 1525, 1579
BspFNI	CGCG	3 cut(s)	1134, 1282, 1379
BspHI	TCATGA	2 cut(s)	204, 1188
BspLI	GGNNCC	6 cut(s)	133, 196, 865, 1227, 1494, 1618
BspOI	GCTAGC	1 cut(s)	396
BspPI	GGATC	2 cut(s)	235, 585
BspT107I	GGYRCC	2 cut(s)	194, 1616
BspTNI	GGTCTC	1 cut(s)	1305
BsrDI	GCAATG	2 cut(s)	178, 558
BsrFI	RCCGGY	1 cut(s)	677
BsrI	ACTGG	2 cut(s)	744, 991
BssAI	RCCGGY	1 cut(s)	677
BssECI	CCNNGG	4 cut(s)	1033, 1596, 1597, 1620
BssNI	GRCGYC	2 cut(s)	111, 195
BssT1I	CCWWGG	2 cut(s)	1033, 1620
Bst2UI	CCWGG	2 cut(s)	1230, 1598
Bst4CI	ACNGT	7 cut(s)	298, 482, 885, 912, 997, 1222, 1570
Bst6I	CTCTTC	1 cut(s)	450
BstACI	GRCGYC	2 cut(s)	111, 195
BstC8I	GCNNGC	7 cut(s)	94, 309, 313, 394, 943, 1497, 1543
BstDEI	CTNAG	9 cut(s)	57, 264, 273, 768, 1164, 1302, 1400, 1533, 1587
BstDSI	CCRYGG	1 cut(s)	1620
BstF5I	GGATG	3 cut(s)	355, 1004, 1103
BstFNI	CGCG	3 cut(s)	1134, 1282, 1379
BstH2I	RGCGCY	1 cut(s)	198
BstHHI	GCGC	3 cut(s)	70, 197, 1282
BstMAI	GTCTC	3 cut(s)	267, 1305, 1559
BstMCI	CGRYCG	1 cut(s)	102
BstMWI	GCNNNNNNNGC	7 cut(s)	98, 138, 482, 560, 1523, 1535, 1616
BstNI	CCWGG	2 cut(s)	1230, 1598
BstNSI	RCATGY	2 cut(s)	625, 1044
BstSCI	CCNGG	2 cut(s)	1228, 1596
BstSFI	CTRYAG	1 cut(s)	1242
BstSLI	GKGCMC	4 cut(s)	47, 360, 1432, 1597
BstUI	CGCG	3 cut(s)	1134, 1282, 1379
BstV1I	GCAGC	9 cut(s)	82, 472, 964, 967, 1513, 1525, 1594, 1597, 1633
BstX2I	RGATCY	2 cut(s)	240, 961
BstXI	CCANNNNNNTGG	1 cut(s)	142
BstYI	RGATCY	2 cut(s)	240, 961
BstZI	CGGCCG	1 cut(s)	99
BsuRI	GGCC	5 cut(s)	101, 132, 332, 866, 945
BtgI	CCRYGG	1 cut(s)	1620
BtgZI	GCGATG	2 cut(s)	238, 774
BtrI	CACGTC	1 cut(s)	1661
BtsCI	GGATG	3 cut(s)	355, 1004, 1103
BtsIMutI	CAGTG	2 cut(s)	984, 993
Cac8I	GCNNGC	7 cut(s)	94, 309, 313, 394, 943, 1497, 1543
CciI	TCATGA	2 cut(s)	204, 1188
CfoI	GCGC	3 cut(s)	70, 197, 1282
Cfr10I	RCCGGY	1 cut(s)	677
Cfr13I	GGNCC	4 cut(s)	120, 131, 864, 1030
CseI	GACGC	1 cut(s)	1385
CviAII	CATG	8 cut(s)	142, 205, 589, 622, 1041, 1178, 1189, 1621
DdeI	CTNAG	9 cut(s)	57, 264, 273, 768, 1164, 1302, 1400, 1533, 1587
DinI	GGCGCC	1 cut(s)	196
DraI	TTTAAA	2 cut(s)	658, 1209
EaeI	YGGCCR	2 cut(s)	99, 943
EagI	CGGCCG	1 cut(s)	99
Eam1104I	CTCTTC	1 cut(s)	450
EarI	CTCTTC	1 cut(s)	450
EciI	GGCGGA	1 cut(s)	531
EclXI	CGGCCG	1 cut(s)	99
Eco130I	CCWWGG	2 cut(s)	1033, 1620
Eco31I	GGTCTC	1 cut(s)	1305
Eco47I	GGWCC	2 cut(s)	120, 1030
Eco52I	CGGCCG	1 cut(s)	99
Eco57I	CTGAAG	2 cut(s)	56, 975
EcoO109I	RGGNCCY	1 cut(s)	1030
EcoRI	GAATTC	1 cut(s)	1213
EcoRII	CCWGG	2 cut(s)	1228, 1596
EcoT14I	CCWWGG	2 cut(s)	1033, 1620
EgeI	GGCGCC	1 cut(s)	196
EheI	GGCGCC	1 cut(s)	196
ErhI	CCWWGG	2 cut(s)	1033, 1620
Esp3I	CGTCTC	1 cut(s)	1559
FaeI	CATG	8 cut(s)	145, 208, 592, 625, 1044, 1181, 1192, 1624
FalI	AAGNNNNNCTT	4 cut(s)	515, 547, 861, 893
FaqI	GGGAC	1 cut(s)	1286
FatI	CATG	8 cut(s)	141, 204, 588, 621, 1040, 1177, 1188, 1620
FauI	CCCGC	2 cut(s)	238, 369
FbaI	TGATCA	2 cut(s)	372, 1144
FblI	GTMKAC	1 cut(s)	249
FokI	GGATG	3 cut(s)	362, 991, 1110
FspBI	CTAG	4 cut(s)	393, 473, 638, 902
GlaI	GCGC	3 cut(s)	69, 196, 1281
GsaI	CCCAGC	1 cut(s)	1296
GsuI	CTGGAG	2 cut(s)	761, 1355
HaeII	RGCGCY	1 cut(s)	198
HaeIII	GGCC	5 cut(s)	101, 132, 332, 866, 945
HapII	CCGG	2 cut(s)	678, 1455
HgaI	GACGC	1 cut(s)	1385
HhaI	GCGC	3 cut(s)	70, 197, 1282
Hin1I	GRCGYC	2 cut(s)	111, 195
Hin1II	CATG	8 cut(s)	145, 208, 592, 625, 1044, 1181, 1192, 1624
Hin6I	GCGC	3 cut(s)	68, 195, 1280
HinP1I	GCGC	3 cut(s)	68, 195, 1280
HincII	GTYRAC	3 cut(s)	250, 1444, 1561
HindII	GTYRAC	3 cut(s)	250, 1444, 1561
HinfI	GANTC	4 cut(s)	269, 414, 629, 1469
HpaII	CCGG	2 cut(s)	678, 1455
HphI	GGTGA	7 cut(s)	88, 169, 218, 293, 581, 908, 1582
Hpy166II	GTNNAC	8 cut(s)	226, 250, 358, 1175, 1430, 1444, 1561, 1658
Hpy188I	TCNGA	5 cut(s)	36, 274, 754, 784, 1588
Hpy188III	TCNNGA	9 cut(s)	118, 158, 205, 266, 322, 376, 926, 1189, 1334
Hpy8I	GTNNAC	8 cut(s)	226, 250, 358, 1175, 1430, 1444, 1561, 1658
Hpy99I	CGWCG	7 cut(s)	107, 113, 116, 164, 194, 251, 1420
HpyAV	CCTTC	6 cut(s)	31, 58, 319, 457, 598, 1194
HpyCH4III	ACNGT	7 cut(s)	298, 482, 885, 912, 997, 1222, 1570
HpyCH4IV	ACGT	2 cut(s)	111, 1660
HpyF10VI	GCNNNNNNNGC	7 cut(s)	98, 138, 482, 560, 1523, 1535, 1616
HpyF3I	CTNAG	9 cut(s)	57, 264, 273, 768, 1164, 1302, 1400, 1533, 1587
HpySE526I	ACGT	2 cut(s)	111, 1660
Hsp92I	GRCGYC	2 cut(s)	111, 195
Hsp92II	CATG	8 cut(s)	145, 208, 592, 625, 1044, 1181, 1192, 1624
HspAI	GCGC	3 cut(s)	68, 195, 1280
KasI	GGCGCC	1 cut(s)	194
Ksp22I	TGATCA	2 cut(s)	372, 1144
LmnI	GCTCC	5 cut(s)	466, 742, 1139, 1492, 1643
Lsp1109I	GCAGC	9 cut(s)	82, 472, 964, 967, 1513, 1525, 1594, 1597, 1633
LweI	GCATC	6 cut(s)	3, 541, 802, 1088, 1171, 1594
MaeI	CTAG	4 cut(s)	393, 473, 638, 902
MaeII	ACGT	2 cut(s)	111, 1660
MaeIII	GTNAC	4 cut(s)	175, 617, 1262, 1358
MboII	GAAGA	6 cut(s)	467, 472, 968, 971, 1067, 1121
MfeI	CAATTG	1 cut(s)	1122
MflI	RGATCY	2 cut(s)	240, 961
MhlI	GDGCHC	4 cut(s)	47, 360, 1432, 1597
MluCI	AATT	5 cut(s)	367, 1122, 1213, 1287, 1461
Mly113I	GGCGCC	1 cut(s)	195
MlyI	GAGTC	1 cut(s)	263
MmeI	TCCRAC	2 cut(s)	210, 1048
MseI	TTAA	8 cut(s)	585, 657, 708, 747, 1083, 1208, 1449, 1553
MslI	CAYNNNNRTG	2 cut(s)	203, 1045
MspA1I	CMGCKG	1 cut(s)	73
MspI	CCGG	2 cut(s)	678, 1455
MspR9I	CCNGG	2 cut(s)	1230, 1598
MunI	CAATTG	1 cut(s)	1122
Mva1269I	GAATGC	1 cut(s)	1677
MvaI	CCWGG	2 cut(s)	1230, 1598
MvnI	CGCG	3 cut(s)	1134, 1282, 1379
MwoI	GCNNNNNNNGC	7 cut(s)	98, 138, 482, 560, 1523, 1535, 1616
NarI	GGCGCC	1 cut(s)	195
NcoI	CCATGG	1 cut(s)	1620
NheI	GCTAGC	1 cut(s)	392
NlaIII	CATG	8 cut(s)	145, 208, 592, 625, 1044, 1181, 1192, 1624
NlaIV	GGNNCC	6 cut(s)	133, 196, 865, 1227, 1494, 1618
NmeAIII	GCCGAG	1 cut(s)	108
NmuCI	GTSAC	2 cut(s)	175, 1358
NspI	RCATGY	2 cut(s)	625, 1044
PagI	TCATGA	2 cut(s)	204, 1188
PasI	CCCWGGG	1 cut(s)	1597
PcsI	WCGNNNNNNNCGW	2 cut(s)	111, 1672
PctI	GAATGC	1 cut(s)	1677
PfeI	GAWTC	3 cut(s)	414, 629, 1469
PflFI	GACNNNGTC	2 cut(s)	113, 1662
PleI	GAGTC	1 cut(s)	263
PluTI	GGCGCC	1 cut(s)	198
PpsI	GAGTC	1 cut(s)	263
PpuMI	RGGWCCY	1 cut(s)	1030
Psp5II	RGGWCCY	1 cut(s)	1030
Psp6I	CCWGG	2 cut(s)	1228, 1596
PspFI	CCCAGC	1 cut(s)	1292
PspGI	CCWGG	2 cut(s)	1228, 1596
PspN4I	GGNNCC	6 cut(s)	133, 196, 865, 1227, 1494, 1618
PspPI	GGNCC	4 cut(s)	120, 131, 864, 1030
PspPPI	RGGWCCY	1 cut(s)	1030
PsuI	RGATCY	2 cut(s)	240, 961
PsyI	GACNNNGTC	2 cut(s)	113, 1662
PvuII	CAGCTG	1 cut(s)	73
RseI	CAYNNNNRTG	2 cut(s)	203, 1045
SalI	GTCGAC	1 cut(s)	248
SaqAI	TTAA	8 cut(s)	585, 657, 708, 747, 1083, 1208, 1449, 1553
Sau96I	GGNCC	4 cut(s)	120, 131, 864, 1030
SchI	GAGTC	1 cut(s)	263
ScrFI	CCNGG	2 cut(s)	1230, 1598
SduI	GDGCHC	4 cut(s)	47, 360, 1432, 1597
SfaNI	GCATC	6 cut(s)	3, 541, 802, 1088, 1171, 1594
SfcI	CTRYAG	1 cut(s)	1242
SfoI	GGCGCC	1 cut(s)	196
SinI	GGWCC	2 cut(s)	120, 1030
SmiMI	CAYNNNNRTG	2 cut(s)	203, 1045
SmlI	CTYRAG	1 cut(s)	1267
SmoI	CTYRAG	1 cut(s)	1267
Sse9I	AATT	5 cut(s)	367, 1122, 1213, 1287, 1461
SsiI	CCGC	7 cut(s)	20, 231, 234, 362, 390, 516, 1134
SspDI	GGCGCC	1 cut(s)	194
SspI	AATATT	2 cut(s)	733, 826
SspMI	CTAG	4 cut(s)	393, 473, 638, 902
StyD4I	CCNGG	2 cut(s)	1228, 1596
StyI	CCWWGG	2 cut(s)	1033, 1620
TaaI	ACNGT	7 cut(s)	298, 482, 885, 912, 997, 1222, 1570
TaiI	ACGT	2 cut(s)	114, 1663
TaqI	TCGA	7 cut(s)	216, 249, 385, 453, 549, 925, 1415
TasI	AATT	5 cut(s)	367, 1122, 1213, 1287, 1461
TauI	GCSGC	1 cut(s)	236
TfiI	GAWTC	3 cut(s)	414, 629, 1469
Tru1I	TTAA	8 cut(s)	585, 657, 708, 747, 1083, 1208, 1449, 1553
Tru9I	TTAA	8 cut(s)	585, 657, 708, 747, 1083, 1208, 1449, 1553
TscAI	CASTG	2 cut(s)	991, 1000
TseFI	GTSAC	2 cut(s)	175, 1358
TseI	GCWGC	9 cut(s)	70, 485, 977, 980, 1526, 1538, 1607, 1610, 1646
Tsp45I	GTSAC	2 cut(s)	175, 1358
TspDTI	ATGAA	3 cut(s)	221, 1141, 1300
TspGWI	ACGGA	2 cut(s)	62, 1452
TspRI	CASTG	2 cut(s)	991, 1000
Tth111I	GACNNNGTC	2 cut(s)	113, 1662
VneI	GTGCAC	2 cut(s)	356, 1428
VpaK11BI	GGWCC	2 cut(s)	120, 1030
XapI	RAATTY	2 cut(s)	367, 1213
XceI	RCATGY	2 cut(s)	625, 1044
XmiI	GTMKAC	1 cut(s)	249
XspI	CTAG	4 cut(s)	393, 473, 638, 902
ZraI	GACGTC	1 cut(s)	112

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.