Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

tig00012499

Orthogroup ID

OG0004167

Physical Location & Seq

Genomic Coordinates Forward (+)

142505 .. 150736

Gene Structure 8232 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12499g00060.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1806 bp

ATGGTTACTCTCTGTTTGCAACACTTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCTCCTCTCTCCTCCTCCCTCGCTCCATCCATTAGCCGCCGCCGTAACATCCGCATCTGCAACAATGTCATCCATGCTGCAACCACAGATCATACTGTTGAAGGAGGGTACGGATACGTCGCAAGGGAAGGCGCAGCTGGTGAGCAATATAAATGCCTGCACGGCGGTGGCCGATGTGGTGAGGACCACGCTGGGCCCTAGGGGCATGGACAAGCTCATTCACGACGACAAGGGTAGTGTTACTATTTCCAACGATGGCGCCACCATCATGAAGTTGCTTGATATTGTTCACCCTGCCGCAAAGATCCTTGTTGACATCGCCAAGTCTCAGGATTCTGAGGTTGGTGATGGAACGACAACAGTTGTTCTGCTTGCAGGGGAGTTTTTGAAGGAGGCCAAGCCTTTCATAGAGGATGGGGTGCACCCACAAAGTTTGATAAAAAGTTATCGGACTGCTAGCTATTTGGCAATTGAGAAAATCAAAGAACTTGCTGTAAGCATAGAGGGCAAAAGCCTTGAAGAGAAGAAAAACCTGCTAGCTAAATGTGCAGCTACAACACTTTCTTCAAAACTCATTGGTGGAGAAAAGGAGTTTTTTGCATCAATGGTCGTGGATGCTGTCATTGCAATTGGTGATGAAGATCGTCTCAACATGATTGGAATAAAGAAGGTTTCTGGTGGCAACATGCGTGACTCCTTTTTAGTAAATGGCGTTGCCTTCAAGAAGACATTTTCATATGCTGGGTTTGAACAACAACCAAAGAAGTTTCTTAATCCCAAGATACTTCTACTGAACATTGAATTGGAACTGAAATCTGAGAAAGAAAATGCTGAGATAAGATTGTCAGATCCATCCCAGTATCAGTCCATTGTTGATGCAGAATGGAATATTATTTATGACAAGTTGGATAAGTGTGTGCAGAGTGGGGCCAAGGTTGTTCTTTCACGGCTGGCTATCGGTGATCTAGCAACACAGTATTTTGCAGATAGAGACATATTCTGTGCTGGACGTGTAACTGAAGAAGATCTGCACCGGGTAGCTGCTGCCACTGGCGGGACTGTGCAAACATCCATCAACAATGTCATTGAAGAGGTCCTGGGAACGTGCGAGTGTTTTGAGGAAAGGCAAGTTGGAAATGAGAGGTTTAATATATTTAGTGGATGTCCGTCAGGTAGGACAGCAACAATTGTTCTTCGTGGTGGAGCTGATCAGTTCATTGAGGAAGCTGAGAGGAGTTTACATGATGCTATTATGATTGTCAGAAGAGCGCTAAAGAATTCAACTGTAGTTGCTGGTGGTGGTGCTATAGATATGGAAATCAGCCGGTACTTGCGGCAGAAAGCACATGAAATCAGGGGGAAGTCTCAGTTTTTCATTAACTCATATGCAAAAGCTCTTGAGGTTATCCCACGACAACTGTGTGATAATGCAGGATTTGATGCGACTGATGTGCTAAACAAACTTAGACAGAAACACGCACATCCATCTGGCGAGGGTGCACTTTATGGAGTCGACATCAACACAGGTGGAATTGCCGATTCATTTGCTAACTTTGTCTGGGAGCCAGCAGTTGTGAAGATCAATGCTATAAATGCTGCTACCGAGGCTGCTTGCCTCGTTTTAAGTGTTGACGAGACAGTAAAAAACCCAAAGTCTGAGAGTGCACAGGGAGAAGCTGCTGCAAGTGCCATGGGAGGTCGAGGGCGTGGAGGTGGTCGTGGGCGGGGGATGCGAAGGCGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002199 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005832 GO:0005856 GO:0005874 GO:0006457 GO:0006458 GO:0006810 GO:0007338 GO:0007339 GO:0008037 GO:0008150 GO:0009566 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009988 GO:0010035 GO:0010038 GO:0010556 GO:0010557 GO:0010604 GO:0010638 GO:0015630 GO:0019219 GO:0019222 GO:0019953 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031647 GO:0032204 GO:0032206 GO:0032210 GO:0032212 GO:0032879 GO:0032880 GO:0032991 GO:0033043 GO:0033044 GO:0035036 GO:0042221 GO:0042802 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044183 GO:0044297 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0044703 GO:0045935 GO:0046686 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050821 GO:0050896 GO:0051052 GO:0051054 GO:0051082 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051704 GO:0060255 GO:0060341 GO:0061077 GO:0065007 GO:0065008 GO:0070201 GO:0070202 GO:0070203 GO:0080090 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0101031 GO:1901998 GO:1903827 GO:1903829 GO:1904356 GO:1904358 GO:1904814 GO:1904816 GO:1904851 GO:1904951 GO:2000112 GO:2000278 GO:2000573 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cpn60_TCP1

Protein Analysis

602

Amino Acids

64.67

Weight (kDa)

6.27

Isoelectric Point (pI)

38.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004167)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11830 AT3G11830
fragaria_vesca	FvH4_3g27240 FvH4_3g27240 FvH4_3g27240 FvH4_3g27240
malus_domestica	MD03G1164100.v1.1
prunus_persica	Prupe.6G154400_v2.0.a1 Prupe.6G154400_v2.0.a1
pyrus_communis	pycom11g15670 pycom12499g00060
rosa_chinensis	RchiOBHm_Chr2g0128841 RchiOBHm_Chr5g0049871
rosa_laevigata	RLG00000019032 RLG00000034659
rosa_multiflora	Rmu_sc0007061.1_g000001 Rmu_sc0008387.1_g000010 Rmu_sc0035081.1_g000001
rosa_roxburghii	Rroxscaffold_1G00031490 Rroxscaffold_2G00115180
rosa_rugosa	Rorug02G0281600 Rorug02G0281700 Rorug05G0253500
rosa_samantha	Rh2AG334200 Rh2BG342200 Rh2CG321100 Rh2DG358900 Rh5AG328400 Rh5BG338900 Rh5CG364600 Rh5DG351300
rosa_wichuraiana	Rw2G027020 Rw5G031010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	603
AccB1I	GGYRCC	1 cut(s)	320
AccI	GTMKAC	1 cut(s)	1575
AciI	CCGC	9 cut(s)	99, 102, 114, 227, 360, 1116, 1396, 1786, 1801
AclWI	GGATC	2 cut(s)	361, 905
AcoI	YGGCCR	1 cut(s)	231
AcsI	RAATTY	1 cut(s)	1339
AcuI	CTGAAG	1 cut(s)	1101
AcyI	GRCGYC	1 cut(s)	321
AfaI	GTAC	2 cut(s)	172, 1391
AfeI	AGCGCT	1 cut(s)	1332
AfiI	CCNNNNNNNGG	1 cut(s)	1116
AflIII	ACRYGT	1 cut(s)	1072
AgsI	TTSAA	9 cut(s)	163, 451, 581, 630, 784, 812, 863, 1151, 1344
AjiI	CACGTC	1 cut(s)	1073
AjnI	CCWGG	1 cut(s)	1158
AjuI	GAANNNNNNNTTGG	4 cut(s)	848, 880, 1176, 1208
AleI	CACNNNNGTG	1 cut(s)	227
Alw21I	GWGCWC	3 cut(s)	486, 1564, 1729
Alw26I	GTCTC	5 cut(s)	393, 713, 1047, 1431, 1691
Alw44I	GTGCAC	3 cut(s)	482, 1560, 1725
AlwI	GGATC	2 cut(s)	361, 905
Aor51HI	AGCGCT	1 cut(s)	1332
AoxI	GGCC	4 cut(s)	231, 256, 456, 990
ApaI	GGGCCC	1 cut(s)	260
ApaLI	GTGCAC	3 cut(s)	482, 1560, 1725
ApeKI	GCWGC	9 cut(s)	139, 196, 611, 1103, 1106, 1658, 1670, 1739, 1742
ApoI	RAATTY	1 cut(s)	1339
AspA2I	CCTAGG	1 cut(s)	260
AspLEI	GCGC	3 cut(s)	196, 323, 1333
AspS9I	GGNCC	5 cut(s)	246, 256, 257, 990, 1156
AsuC2I	CCSGG	1 cut(s)	1097
AsuHPI	GGTGA	6 cut(s)	214, 253, 344, 419, 707, 1034
AsuNHI	GCTAGC	2 cut(s)	518, 598
AvaII	GGWCC	2 cut(s)	246, 1156
AvrII	CCTAGG	1 cut(s)	260
BaeGI	GKGCMC	4 cut(s)	260, 486, 1564, 1729
BanI	GGYRCC	1 cut(s)	320
BanII	GRGCYC	1 cut(s)	260
BbsI	GAAGAC	1 cut(s)	794
Bbv12I	GWGCWC	3 cut(s)	486, 1564, 1729
BbvI	GCAGC	9 cut(s)	126, 208, 623, 1090, 1093, 1645, 1657, 1726, 1729
BccI	CCATC	8 cut(s)	96, 311, 335, 404, 470, 922, 1142, 1555
BceAI	ACGGC	3 cut(s)	89, 240, 1025
BcgI	CGANNNNNNTGC	4 cut(s)	1495, 1529, 1589, 1623
BciT130I	CCWGG	1 cut(s)	1160
BciVI	GTATCC	1 cut(s)	169
BclI	TGATCA	1 cut(s)	1270
BcnI	CCSGG	1 cut(s)	1097
BcoDI	GTCTC	5 cut(s)	393, 713, 1047, 1431, 1691
BfaI	CTAG	4 cut(s)	261, 519, 599, 1028
BfmI	CTRYAG	2 cut(s)	1347, 1368
BfoI	RGCGCY	2 cut(s)	324, 1334
BfuAI	ACCTGC	1 cut(s)	603
BfuI	GTATCC	1 cut(s)	169
BglI	GCCNNNNNGGC	2 cut(s)	224, 264
BglII	AGATCT	1 cut(s)	1087
BlnI	CCTAGG	1 cut(s)	260
Bme1390I	CCNGG	2 cut(s)	1097, 1160
Bme18I	GGWCC	2 cut(s)	246, 1156
BmgBI	CACGTC	1 cut(s)	1073
BmgT120I	GGNCC	5 cut(s)	246, 256, 257, 990, 1156
BmiI	GGNNCC	4 cut(s)	258, 322, 991, 1626
BmrFI	CCNGG	2 cut(s)	1097, 1160
BmrI	ACTGGG	1 cut(s)	913
BmsI	GCATC	7 cut(s)	125, 667, 671, 928, 1297, 1492, 1782
BmtI	GCTAGC	2 cut(s)	522, 602
BmuI	ACTGGG	1 cut(s)	913
BpiI	GAAGAC	1 cut(s)	794
BpuEI	CTTGAG	1 cut(s)	1481
BpuMI	CCSGG	1 cut(s)	1097
BsaBI	GATNNNNATC	1 cut(s)	702
BsaHI	GRCGYC	1 cut(s)	321
BsaJI	CCNNGG	5 cut(s)	260, 993, 1159, 1665, 1752
Bsc4I	CCNNNNNNNGG	1 cut(s)	1116
Bse118I	RCCGGY	1 cut(s)	1386
Bse1I	ACTGG	2 cut(s)	919, 1117
Bse3DI	GCAATG	1 cut(s)	684
Bse8I	GATNNNNATC	1 cut(s)	702
BseBI	CCWGG	1 cut(s)	1160
BseDI	CCNNGG	5 cut(s)	260, 993, 1159, 1665, 1752
BseJI	GATNNNNATC	1 cut(s)	702
BseLI	CCNNNNNNNGG	1 cut(s)	1116
BseMI	GCAATG	1 cut(s)	684
BseMII	CTCAG	7 cut(s)	390, 404, 870, 885, 1281, 1442, 1710
BseNI	ACTGG	2 cut(s)	919, 1117
BseRI	GAGGAG	4 cut(s)	56, 63, 66, 1309
BseSI	GKGCMC	4 cut(s)	260, 486, 1564, 1729
BseXI	GCAGC	9 cut(s)	126, 208, 623, 1090, 1093, 1645, 1657, 1726, 1729
BseYI	CCCAGC	2 cut(s)	253, 803
BsgI	GTGCAG	4 cut(s)	205, 630, 1001, 1076
BshFI	GGCC	4 cut(s)	233, 258, 458, 992
BshNI	GGYRCC	1 cut(s)	320
BsiHKAI	GWGCWC	3 cut(s)	486, 1564, 1729
BsiSI	CCGG	2 cut(s)	1096, 1387
BslFI	GGGAC	1 cut(s)	1132
BslI	CCNNNNNNNGG	1 cut(s)	1116
BsmAI	GTCTC	5 cut(s)	393, 713, 1047, 1431, 1691
BsmBI	CGTCTC	1 cut(s)	713
BsmFI	GGGAC	1 cut(s)	1132
BsnI	GGCC	4 cut(s)	233, 258, 458, 992
Bsp120I	GGGCCC	1 cut(s)	256
Bsp1286I	GDGCHC	4 cut(s)	260, 486, 1564, 1729
Bsp143I	GATC	8 cut(s)	150, 366, 703, 910, 1024, 1087, 1270, 1641
Bsp19I	CCATGG	1 cut(s)	1752
BspACI	CCGC	9 cut(s)	99, 102, 114, 227, 360, 1116, 1396, 1786, 1801
BspANI	GGCC	4 cut(s)	233, 258, 458, 992
BspCNI	CTCAG	7 cut(s)	391, 403, 871, 886, 1282, 1441, 1711
BspHI	TCATGA	1 cut(s)	330
BspLI	GGNNCC	4 cut(s)	258, 322, 991, 1626
BspMI	ACCTGC	1 cut(s)	603
BspOI	GCTAGC	2 cut(s)	522, 602
BspPI	GGATC	2 cut(s)	361, 905
BspQI	GCTCTTC	1 cut(s)	1321
BspT107I	GGYRCC	1 cut(s)	320
BsrDI	GCAATG	1 cut(s)	684
BsrFI	RCCGGY	1 cut(s)	1386
BsrI	ACTGG	2 cut(s)	919, 1117
BssAI	RCCGGY	1 cut(s)	1386
BssECI	CCNNGG	5 cut(s)	260, 993, 1159, 1665, 1752
BssMI	GATC	8 cut(s)	150, 366, 703, 910, 1024, 1087, 1270, 1641
BssNI	GRCGYC	1 cut(s)	321
BssT1I	CCWWGG	3 cut(s)	260, 993, 1752
Bst2UI	CCWGG	1 cut(s)	1160
Bst4CI	ACNGT	7 cut(s)	159, 424, 1038, 1123, 1348, 1482, 1702
Bst6I	CTCTTC	3 cut(s)	576, 1146, 1321
BstACI	GRCGYC	1 cut(s)	321
BstC8I	GCNNGC	7 cut(s)	220, 435, 520, 600, 1014, 1629, 1675
BstDEI	CTNAG	8 cut(s)	390, 399, 879, 894, 1290, 1428, 1526, 1719
BstDSI	CCRYGG	1 cut(s)	1752
BstH2I	RGCGCY	2 cut(s)	324, 1334
BstHHI	GCGC	3 cut(s)	196, 323, 1333
BstKTI	GATC	8 cut(s)	153, 369, 706, 913, 1027, 1090, 1273, 1644
BstMAI	GTCTC	5 cut(s)	393, 713, 1047, 1431, 1691
BstMBI	GATC	8 cut(s)	150, 366, 703, 910, 1024, 1087, 1270, 1641
BstMWI	GCNNNNNNNGC	9 cut(s)	224, 264, 567, 608, 686, 1655, 1667, 1748, 1792
BstNI	CCWGG	1 cut(s)	1160
BstNSI	RCATGY	1 cut(s)	751
BstSCI	CCNGG	2 cut(s)	1095, 1158
BstSFI	CTRYAG	2 cut(s)	1347, 1368
BstSLI	GKGCMC	4 cut(s)	260, 486, 1564, 1729
BstV1I	GCAGC	9 cut(s)	126, 208, 623, 1090, 1093, 1645, 1657, 1726, 1729
BstV2I	GAAGAC	1 cut(s)	794
BstX2I	RGATCY	3 cut(s)	366, 910, 1087
BstYI	RGATCY	3 cut(s)	366, 910, 1087
BsuI	GTATCC	1 cut(s)	169
BsuRI	GGCC	4 cut(s)	233, 258, 458, 992
BtgI	CCRYGG	1 cut(s)	1752
BtgZI	GCGATG	1 cut(s)	364
BtrI	CACGTC	1 cut(s)	1073
BtsIMutI	CAGTG	1 cut(s)	1110
BveI	ACCTGC	1 cut(s)	603
Cac8I	GCNNGC	7 cut(s)	220, 435, 520, 600, 1014, 1629, 1675
CciI	TCATGA	1 cut(s)	330
CfoI	GCGC	3 cut(s)	196, 323, 1333
Cfr10I	RCCGGY	1 cut(s)	1386
Cfr13I	GGNCC	5 cut(s)	246, 256, 257, 990, 1156
Csp6I	GTAC	2 cut(s)	171, 1390
CspCI	CAANNNNNGTGG	6 cut(s)	477, 512, 654, 689, 1570, 1605
CviAII	CATG	8 cut(s)	136, 268, 331, 715, 748, 1304, 1409, 1753
CviQI	GTAC	2 cut(s)	171, 1390
DdeI	CTNAG	8 cut(s)	390, 399, 879, 894, 1290, 1428, 1526, 1719
DinI	GGCGCC	1 cut(s)	322
DpnI	GATC	8 cut(s)	152, 368, 705, 912, 1026, 1089, 1272, 1643
DpnII	GATC	8 cut(s)	150, 366, 703, 910, 1024, 1087, 1270, 1641
EaeI	YGGCCR	1 cut(s)	231
Eam1104I	CTCTTC	3 cut(s)	576, 1146, 1321
EarI	CTCTTC	3 cut(s)	576, 1146, 1321
Eco130I	CCWWGG	3 cut(s)	260, 993, 1752
Eco24I	GRGCYC	1 cut(s)	260
Eco47I	GGWCC	2 cut(s)	246, 1156
Eco47III	AGCGCT	1 cut(s)	1332
Eco57I	CTGAAG	1 cut(s)	1101
EcoO109I	RGGNCCY	2 cut(s)	257, 1156
EcoRI	GAATTC	1 cut(s)	1339
EcoRII	CCWGG	1 cut(s)	1158
EcoT14I	CCWWGG	3 cut(s)	260, 993, 1752
EcoT38I	GRGCYC	1 cut(s)	260
EgeI	GGCGCC	1 cut(s)	322
EheI	GGCGCC	1 cut(s)	322
ErhI	CCWWGG	3 cut(s)	260, 993, 1752
Esp3I	CGTCTC	1 cut(s)	713
FaeI	CATG	8 cut(s)	139, 271, 334, 718, 751, 1307, 1412, 1756
FaqI	GGGAC	1 cut(s)	1132
FatI	CATG	8 cut(s)	135, 267, 330, 714, 747, 1303, 1408, 1752
FauI	CCCGC	2 cut(s)	1109, 1779
FauNDI	CATATG	2 cut(s)	799, 1447
FbaI	TGATCA	1 cut(s)	1270
FblI	GTMKAC	1 cut(s)	1575
FokI	GGATG	9 cut(s)	75, 97, 118, 488, 689, 901, 1117, 1236, 1530
FriOI	GRGCYC	1 cut(s)	260
FspBI	CTAG	4 cut(s)	261, 519, 599, 1028
GlaI	GCGC	3 cut(s)	195, 322, 1332
GsaI	CCCAGC	2 cut(s)	257, 807
HaeII	RGCGCY	2 cut(s)	324, 1334
HaeIII	GGCC	4 cut(s)	233, 258, 458, 992
HapII	CCGG	2 cut(s)	1096, 1387
HhaI	GCGC	3 cut(s)	196, 323, 1333
Hin1I	GRCGYC	1 cut(s)	321
Hin1II	CATG	8 cut(s)	139, 271, 334, 718, 751, 1307, 1412, 1756
Hin6I	GCGC	3 cut(s)	194, 321, 1331
HinP1I	GCGC	3 cut(s)	194, 321, 1331
HincII	GTYRAC	3 cut(s)	376, 1576, 1693
HindII	GTYRAC	3 cut(s)	376, 1576, 1693
HinfI	GANTC	4 cut(s)	395, 755, 1572, 1601
HpaII	CCGG	2 cut(s)	1096, 1387
HphI	GGTGA	6 cut(s)	214, 253, 344, 419, 707, 1034
Hpy166II	GTNNAC	8 cut(s)	352, 376, 484, 1301, 1562, 1576, 1693, 1727
Hpy188I	TCNGA	6 cut(s)	400, 513, 880, 910, 1325, 1720
Hpy188III	TCNNGA	5 cut(s)	284, 331, 392, 784, 1460
Hpy8I	GTNNAC	8 cut(s)	352, 376, 484, 1301, 1562, 1576, 1693, 1727
Hpy99I	CGWCG	2 cut(s)	184, 290
HpyAV	CCTTC	6 cut(s)	157, 184, 445, 724, 790, 1791
HpyCH4III	ACNGT	7 cut(s)	159, 424, 1038, 1123, 1348, 1482, 1702
HpyCH4IV	ACGT	3 cut(s)	179, 1072, 1166
HpyF10VI	GCNNNNNNNGC	9 cut(s)	224, 264, 567, 608, 686, 1655, 1667, 1748, 1792
HpyF3I	CTNAG	8 cut(s)	390, 399, 879, 894, 1290, 1428, 1526, 1719
HpySE526I	ACGT	3 cut(s)	179, 1072, 1166
Hsp92I	GRCGYC	1 cut(s)	321
Hsp92II	CATG	8 cut(s)	139, 271, 334, 718, 751, 1307, 1412, 1756
HspAI	GCGC	3 cut(s)	194, 321, 1331
KasI	GGCGCC	1 cut(s)	320
Ksp22I	TGATCA	1 cut(s)	1270
Kzo9I	GATC	8 cut(s)	150, 366, 703, 910, 1024, 1087, 1270, 1641
LguI	GCTCTTC	1 cut(s)	1321
LmnI	GCTCC	3 cut(s)	90, 1265, 1624
Lsp1109I	GCAGC	9 cut(s)	126, 208, 623, 1090, 1093, 1645, 1657, 1726, 1729
LweI	GCATC	7 cut(s)	125, 667, 671, 928, 1297, 1492, 1782
MaeI	CTAG	4 cut(s)	261, 519, 599, 1028
MaeII	ACGT	3 cut(s)	179, 1072, 1166
MaeIII	GTNAC	5 cut(s)	4, 106, 301, 752, 1075
MalI	GATC	8 cut(s)	152, 368, 705, 912, 1026, 1089, 1272, 1643
MboI	GATC	8 cut(s)	150, 366, 703, 910, 1024, 1087, 1270, 1641
MfeI	CAATTG	3 cut(s)	531, 690, 1248
MflI	RGATCY	3 cut(s)	366, 910, 1087
MhlI	GDGCHC	4 cut(s)	260, 486, 1564, 1729
MluCI	AATT	6 cut(s)	531, 690, 863, 1248, 1339, 1593
Mly113I	GGCGCC	1 cut(s)	321
MlyI	GAGTC	2 cut(s)	749, 1581
MmeI	TCCRAC	3 cut(s)	336, 948, 1174
MseI	TTAA	4 cut(s)	834, 1209, 1440, 1685
MslI	CAYNNNNRTG	2 cut(s)	227, 329
MspA1I	CMGCKG	1 cut(s)	199
MspI	CCGG	2 cut(s)	1096, 1387
MspR9I	CCNGG	2 cut(s)	1097, 1160
MunI	CAATTG	3 cut(s)	531, 690, 1248
MvaI	CCWGG	1 cut(s)	1160
MwoI	GCNNNNNNNGC	9 cut(s)	224, 264, 567, 608, 686, 1655, 1667, 1748, 1792
NarI	GGCGCC	1 cut(s)	321
NciI	CCSGG	1 cut(s)	1097
NcoI	CCATGG	1 cut(s)	1752
NdeI	CATATG	2 cut(s)	799, 1447
NdeII	GATC	8 cut(s)	150, 366, 703, 910, 1024, 1087, 1270, 1641
NheI	GCTAGC	2 cut(s)	518, 598
NlaIII	CATG	8 cut(s)	139, 271, 334, 718, 751, 1307, 1412, 1756
NlaIV	GGNNCC	4 cut(s)	258, 322, 991, 1626
NmuCI	GTSAC	1 cut(s)	752
NspI	RCATGY	1 cut(s)	751
OliI	CACNNNNGTG	1 cut(s)	227
PagI	TCATGA	1 cut(s)	330
PciSI	GCTCTTC	1 cut(s)	1321
PfeI	GAWTC	2 cut(s)	395, 1601
PleI	GAGTC	2 cut(s)	749, 1580
PluTI	GGCGCC	1 cut(s)	324
PpsI	GAGTC	2 cut(s)	749, 1580
PpuMI	RGGWCCY	1 cut(s)	1156
Psp5II	RGGWCCY	1 cut(s)	1156
Psp6I	CCWGG	1 cut(s)	1158
PspFI	CCCAGC	2 cut(s)	253, 803
PspGI	CCWGG	1 cut(s)	1158
PspN4I	GGNNCC	4 cut(s)	258, 322, 991, 1626
PspOMI	GGGCCC	1 cut(s)	256
PspPI	GGNCC	5 cut(s)	246, 256, 257, 990, 1156
PspPPI	RGGWCCY	1 cut(s)	1156
PsuI	RGATCY	3 cut(s)	366, 910, 1087
PvuII	CAGCTG	1 cut(s)	199
RsaI	GTAC	2 cut(s)	172, 1391
RsaNI	GTAC	2 cut(s)	171, 1390
RseI	CAYNNNNRTG	2 cut(s)	227, 329
SalI	GTCGAC	1 cut(s)	1574
SapI	GCTCTTC	1 cut(s)	1321
SaqAI	TTAA	4 cut(s)	834, 1209, 1440, 1685
Sau3AI	GATC	8 cut(s)	150, 366, 703, 910, 1024, 1087, 1270, 1641
Sau96I	GGNCC	5 cut(s)	246, 256, 257, 990, 1156
SchI	GAGTC	2 cut(s)	749, 1581
ScrFI	CCNGG	2 cut(s)	1097, 1160
SduI	GDGCHC	4 cut(s)	260, 486, 1564, 1729
SfaNI	GCATC	7 cut(s)	125, 667, 671, 928, 1297, 1492, 1782
SfcI	CTRYAG	2 cut(s)	1347, 1368
SfoI	GGCGCC	1 cut(s)	322
SinI	GGWCC	2 cut(s)	246, 1156
SmiMI	CAYNNNNRTG	2 cut(s)	227, 329
SmlI	CTYRAG	1 cut(s)	1460
SmoI	CTYRAG	1 cut(s)	1460
Sse9I	AATT	6 cut(s)	531, 690, 863, 1248, 1339, 1593
SsiI	CCGC	9 cut(s)	99, 102, 114, 227, 360, 1116, 1396, 1786, 1801
SspDI	GGCGCC	1 cut(s)	320
SspI	AATATT	1 cut(s)	952
SspMI	CTAG	4 cut(s)	261, 519, 599, 1028
StyD4I	CCNGG	2 cut(s)	1095, 1158
StyI	CCWWGG	3 cut(s)	260, 993, 1752
TaaI	ACNGT	7 cut(s)	159, 424, 1038, 1123, 1348, 1482, 1702
TaiI	ACGT	3 cut(s)	182, 1075, 1169
TaqI	TCGA	2 cut(s)	1575, 1762
TasI	AATT	6 cut(s)	531, 690, 863, 1248, 1339, 1593
TauI	GCSGC	4 cut(s)	101, 104, 362, 1399
TfiI	GAWTC	2 cut(s)	395, 1601
Tru1I	TTAA	4 cut(s)	834, 1209, 1440, 1685
Tru9I	TTAA	4 cut(s)	834, 1209, 1440, 1685
TscAI	CASTG	1 cut(s)	1117
TseFI	GTSAC	1 cut(s)	752
TseI	GCWGC	9 cut(s)	139, 196, 611, 1103, 1106, 1658, 1670, 1739, 1742
Tsp45I	GTSAC	1 cut(s)	752
TspDTI	ATGAA	8 cut(s)	347, 457, 714, 786, 1267, 1425, 1426, 1593
TspGWI	ACGGA	2 cut(s)	188, 1218
TspRI	CASTG	1 cut(s)	1117
VneI	GTGCAC	3 cut(s)	482, 1560, 1725
VpaK11BI	GGWCC	2 cut(s)	246, 1156
XapI	RAATTY	1 cut(s)	1339
XceI	RCATGY	1 cut(s)	751
XmaJI	CCTAGG	1 cut(s)	260
XmiI	GTMKAC	1 cut(s)	1575
XspI	CTAG	4 cut(s)	261, 519, 599, 1028

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.