Rmu_sc0007061.1_g000001
TCP Family

assists the folding of proteins upon ATP hydrolysis

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007061.1
Physical Location & Seq
Forward (+)
1 .. 4281
4281 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007061.1_g000001.1.cds

Sequence Viewer

Length: 1314 bp
tctgatctttctgcattttggaatttacaggcgattgagagaatcaagcaacttgcttccagcattgaggggaaaagcctcgaagagaagaaggagctactagctaactgtgctgctacaacactctcctcaaagctcattggcggagaaaaggagttctttgctaaaatggttgtcgatgctgtcattgcgataggtgatgaggatcgtcttaacatgattggaataaagaaggtttctggtggtaacatgcgtgattcctttctagtaaatggcgttgcctttaaaaagacattctcttatgccggttttgaacagcaaccaaaaaagtttcttaatcccaagatactaatactaaatattgaactggagcttaaatccgagaaagaaaatgctgagataagattgtcagacccatcgcagtatcagtccattgttgatgctgaatggaatattatttatgacaagctggataagtgtgtgcagagtggggccaaagttgttctttcacggttggctattggtgatctagcaacacagtattttgcagatcgagatatattctgtgctggccgtgtagctgaagaagatctgcaaagggtagctgctgccagtggtggcactgtgcagacatccatcaatgatgttattgatgaggtccttggaacatgcgaatgttttgaagaaaagcaagttggaaatgagaggtttaatatctttagtggatgcccatctggtaggactgccacaattgttcttcgcggtggagctgatcagttcattgaggaagctgagcgtagtttacatgatgcgatcatgattgttagaagggctttaaagaattcaactgtagttcctggtggtggtgctatagatatggagatcagccgttacttgagggacaaagcacgtgaaattgctgggaggtctcagtttttcatcaactcatatgcaaaagctctggaggttatcccacgacaactatgtgacaatgcgggatttgacgcgactgatatgctaaacaaactaagacagaaacactcgacagctgggggtgcaccttatggagttgacattaacaccggaggaattgctgattcgtatgctaactttgtctgggagccagcagttgtaaagatcaatgctataaatgctgctactgaggctgcttgccttgttttaagtgttgatgagacggtgaaaaatccaaagtctgagagtgcccagggagatgctgctgctggtgccatgggaggtagagggcgtggaggagctgcttttcgtggacgtggtcgtggaatgcgaagacgatag

Protein Analysis

437

Amino Acids

47.4

Weight (kDa)

6.01

Isoelectric Point (pI)

41.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1244
AccII CGCG 2 cut(s) 762, 1007
AciI CCGC 3 cut(s) 144, 762, 995
AclWI GGATC 1 cut(s) 213
AcoI YGGCCR 1 cut(s) 571
AcsI RAATTY 2 cut(s) 22, 841
AcuI CTGAAG 1 cut(s) 603
AcvI CACGTG 1 cut(s) 911
AfiI CCNNNNNNNGG 1 cut(s) 863
AgsI TTSAA 4 cut(s) 314, 365, 683, 846
AjiI CACGTC 1 cut(s) 1289
AjnI CCWGG 2 cut(s) 856, 1224
AjuI GAANNNNNNNTTGG 2 cut(s) 678, 710
Alw21I GWGCWC 1 cut(s) 1060
Alw26I GTCTC 2 cut(s) 933, 1187
Alw44I GTGCAC 1 cut(s) 1056
AlwI GGATC 1 cut(s) 213
AoxI GGCC 2 cut(s) 492, 571
ApaLI GTGCAC 1 cut(s) 1056
ApeKI GCWGC 8 cut(s) 113, 605, 608, 1154, 1166, 1235, 1238, 1274
ApoI RAATTY 2 cut(s) 22, 841
AspS9I GGNCC 2 cut(s) 492, 658
AsuHPI GGTGA 3 cut(s) 209, 536, 1210
AvaII GGWCC 1 cut(s) 658
BaeGI GKGCMC 2 cut(s) 1060, 1225
BanI GGYRCC 1 cut(s) 1244
BbrPI CACGTG 1 cut(s) 911
Bbv12I GWGCWC 1 cut(s) 1060
BbvI GCAGC 8 cut(s) 100, 592, 595, 1141, 1153, 1222, 1225, 1261
BccI CCATC 3 cut(s) 424, 644, 739
BceAI ACGGC 2 cut(s) 558, 873
BcgI CGANNNNNNTGC 2 cut(s) 997, 1031
BciT130I CCWGG 2 cut(s) 858, 1226
BclI TGATCA 1 cut(s) 772
BcoDI GTCTC 2 cut(s) 933, 1187
BfaI CTAG 3 cut(s) 101, 266, 530
BfmI CTRYAG 2 cut(s) 849, 870
BglII AGATCT 1 cut(s) 589
BisI GCNGC 8 cut(s) 114, 606, 609, 1155, 1167, 1236, 1239, 1275
BlpI GCTNAGC 1 cut(s) 792
BlsI GCNGC 8 cut(s) 115, 607, 610, 1156, 1168, 1237, 1240, 1276
Bme1390I CCNGG 2 cut(s) 858, 1226
Bme18I GGWCC 1 cut(s) 658
BmgBI CACGTC 1 cut(s) 1289
BmgT120I GGNCC 2 cut(s) 492, 658
BmiI GGNNCC 3 cut(s) 493, 1122, 1246
BmrFI CCNGG 2 cut(s) 858, 1226
BmsI GCATC 5 cut(s) 169, 430, 716, 799, 1222
BpmI CTGGAG 2 cut(s) 389, 983
Bpu1102I GCTNAGC 1 cut(s) 792
BpuEI CTTGAG 1 cut(s) 916
BsaAI YACGTR 1 cut(s) 911
BsaBI GATNNNNATC 2 cut(s) 204, 730
BsaI GGTCTC 1 cut(s) 933
BsaJI CCNNGG 4 cut(s) 661, 1224, 1225, 1248
BsaWI WCCGGW 1 cut(s) 1082
Bsc4I CCNNNNNNNGG 1 cut(s) 863
Bse118I RCCGGY 1 cut(s) 305
Bse1I ACTGG 2 cut(s) 372, 612
Bse3DI GCAATG 1 cut(s) 186
Bse8I GATNNNNATC 2 cut(s) 204, 730
BseBI CCWGG 2 cut(s) 858, 1226
BseDI CCNNGG 4 cut(s) 661, 1224, 1225, 1248
BseGI GGATG 2 cut(s) 632, 731
BseJI GATNNNNATC 2 cut(s) 204, 730
BseLI CCNNNNNNNGG 1 cut(s) 863
BseMI GCAATG 1 cut(s) 186
BseMII CTCAG 5 cut(s) 387, 783, 944, 1152, 1206
BseNI ACTGG 2 cut(s) 372, 612
BseRI GAGGAG 2 cut(s) 118, 1284
BseSI GKGCMC 2 cut(s) 1060, 1225
BseXI GCAGC 8 cut(s) 100, 592, 595, 1141, 1153, 1222, 1225, 1261
BseYI CCCAGC 2 cut(s) 920, 1049
BsgI GTGCAG 2 cut(s) 503, 647
Bsh1236I CGCG 2 cut(s) 762, 1007
BshFI GGCC 2 cut(s) 494, 573
BshNI GGYRCC 1 cut(s) 1244
BsiHKAI GWGCWC 1 cut(s) 1060
BsiSI CCGG 2 cut(s) 306, 1083
BslFI GGGAC 1 cut(s) 914
BslI CCNNNNNNNGG 1 cut(s) 863
BsmAI GTCTC 2 cut(s) 933, 1187
BsmBI CGTCTC 1 cut(s) 1187
BsmFI GGGAC 1 cut(s) 914
BsmI GAATGC 1 cut(s) 1305
BsnI GGCC 2 cut(s) 494, 573
Bso31I GGTCTC 1 cut(s) 933
Bsp1286I GDGCHC 2 cut(s) 1060, 1225
Bsp143I GATC 9 cut(s) 4, 205, 526, 550, 589, 772, 813, 882, 1137
Bsp1720I GCTNAGC 1 cut(s) 792
Bsp19I CCATGG 1 cut(s) 1248
BspACI CCGC 3 cut(s) 144, 762, 995
BspANI GGCC 2 cut(s) 494, 573
BspCNI CTCAG 5 cut(s) 388, 784, 943, 1153, 1207
BspFNI CGCG 2 cut(s) 762, 1007
BspHI TCATGA 1 cut(s) 816
BspLI GGNNCC 3 cut(s) 493, 1122, 1246
BspPI GGATC 1 cut(s) 213
BspT107I GGYRCC 1 cut(s) 1244
BspTNI GGTCTC 1 cut(s) 933
BsrDI GCAATG 1 cut(s) 186
BsrFI RCCGGY 1 cut(s) 305
BsrI ACTGG 2 cut(s) 372, 612
BssAI RCCGGY 1 cut(s) 305
BssECI CCNNGG 4 cut(s) 661, 1224, 1225, 1248
BssMI GATC 9 cut(s) 4, 205, 526, 550, 589, 772, 813, 882, 1137
BssT1I CCWWGG 2 cut(s) 661, 1248
Bst2UI CCWGG 2 cut(s) 858, 1226
Bst4CI ACNGT 6 cut(s) 110, 513, 540, 625, 850, 1198
Bst6I CTCTTC 1 cut(s) 78
BstBAI YACGTR 1 cut(s) 911
BstC8I GCNNGC 3 cut(s) 571, 1125, 1171
BstDEI CTNAG 6 cut(s) 396, 792, 930, 1028, 1161, 1215
BstDSI CCRYGG 1 cut(s) 1248
BstF5I GGATG 2 cut(s) 632, 731
BstFNI CGCG 2 cut(s) 762, 1007
BstKTI GATC 9 cut(s) 7, 208, 529, 553, 592, 775, 816, 885, 1140
BstMAI GTCTC 2 cut(s) 933, 1187
BstMBI GATC 9 cut(s) 4, 205, 526, 550, 589, 772, 813, 882, 1137
BstMWI GCNNNNNNNGC 6 cut(s) 110, 188, 1055, 1151, 1163, 1244
BstNI CCWGG 2 cut(s) 858, 1226
BstNSI RCATGY 2 cut(s) 253, 672
BstSCI CCNGG 2 cut(s) 856, 1224
BstSFI CTRYAG 2 cut(s) 849, 870
BstSLI GKGCMC 2 cut(s) 1060, 1225
BstUI CGCG 2 cut(s) 762, 1007
BstV1I GCAGC 8 cut(s) 100, 592, 595, 1141, 1153, 1222, 1225, 1261
BstX2I RGATCY 1 cut(s) 589
BstYI RGATCY 1 cut(s) 589
BsuRI GGCC 2 cut(s) 494, 573
BtgI CCRYGG 1 cut(s) 1248
BtgZI GCGATG 1 cut(s) 402
BtrI CACGTC 1 cut(s) 1289
BtsCI GGATG 2 cut(s) 632, 731
BtsIMutI CAGTG 2 cut(s) 619, 621
Cac8I GCNNGC 3 cut(s) 571, 1125, 1171
CciI TCATGA 1 cut(s) 816
Cfr10I RCCGGY 1 cut(s) 305
Cfr13I GGNCC 2 cut(s) 492, 658
CseI GACGC 1 cut(s) 1013
CviAII CATG 6 cut(s) 217, 250, 669, 806, 817, 1249
DdeI CTNAG 6 cut(s) 396, 792, 930, 1028, 1161, 1215
DpnI GATC 9 cut(s) 6, 207, 528, 552, 591, 774, 815, 884, 1139
DpnII GATC 9 cut(s) 4, 205, 526, 550, 589, 772, 813, 882, 1137
DraI TTTAAA 2 cut(s) 286, 837
EaeI YGGCCR 1 cut(s) 571
Eam1104I CTCTTC 1 cut(s) 78
EarI CTCTTC 1 cut(s) 78
EciI GGCGGA 1 cut(s) 159
Eco130I CCWWGG 2 cut(s) 661, 1248
Eco31I GGTCTC 1 cut(s) 933
Eco47I GGWCC 1 cut(s) 658
Eco57I CTGAAG 1 cut(s) 603
Eco72I CACGTG 1 cut(s) 911
EcoO109I RGGNCCY 1 cut(s) 658
EcoRI GAATTC 1 cut(s) 841
EcoRII CCWGG 2 cut(s) 856, 1224
EcoT14I CCWWGG 2 cut(s) 661, 1248
ErhI CCWWGG 2 cut(s) 661, 1248
Esp3I CGTCTC 1 cut(s) 1187
FaeI CATG 6 cut(s) 220, 253, 672, 809, 820, 1252
FalI AAGNNNNNCTT 4 cut(s) 143, 175, 489, 521
FaqI GGGAC 1 cut(s) 914
FatI CATG 6 cut(s) 216, 249, 668, 805, 816, 1248
FauI CCCGC 1 cut(s) 988
FauNDI CATATG 1 cut(s) 949
FbaI TGATCA 1 cut(s) 772
Fnu4HI GCNGC 8 cut(s) 114, 606, 609, 1155, 1167, 1236, 1239, 1275
FokI GGATG 2 cut(s) 619, 738
Fsp4HI GCNGC 8 cut(s) 114, 606, 609, 1155, 1167, 1236, 1239, 1275
FspBI CTAG 3 cut(s) 101, 266, 530
GluI GCNGC 8 cut(s) 114, 606, 609, 1155, 1167, 1236, 1239, 1275
GsaI CCCAGC 2 cut(s) 924, 1053
GsuI CTGGAG 2 cut(s) 389, 983
HaeIII GGCC 2 cut(s) 494, 573
HapII CCGG 2 cut(s) 306, 1083
HgaI GACGC 1 cut(s) 1013
Hin1II CATG 6 cut(s) 220, 253, 672, 809, 820, 1252
HincII GTYRAC 1 cut(s) 1072
HindII GTYRAC 1 cut(s) 1072
HinfI GANTC 3 cut(s) 42, 257, 1097
HpaII CCGG 2 cut(s) 306, 1083
HphI GGTGA 3 cut(s) 209, 536, 1210
Hpy166II GTNNAC 4 cut(s) 803, 1058, 1072, 1286
Hpy188I TCNGA 4 cut(s) 4, 382, 412, 1216
Hpy188III TCNNGA 3 cut(s) 554, 817, 962
Hpy8I GTNNAC 4 cut(s) 803, 1058, 1072, 1286
HpyAV CCTTC 3 cut(s) 85, 226, 822
HpyCH4III ACNGT 6 cut(s) 110, 513, 540, 625, 850, 1198
HpyCH4IV ACGT 2 cut(s) 910, 1288
HpyCH4V TGCA 7 cut(s) 14, 484, 548, 595, 628, 953, 1058
HpyF10VI GCNNNNNNNGC 6 cut(s) 110, 188, 1055, 1151, 1163, 1244
HpyF3I CTNAG 6 cut(s) 396, 792, 930, 1028, 1161, 1215
HpySE526I ACGT 2 cut(s) 910, 1288
Hsp92II CATG 6 cut(s) 220, 253, 672, 809, 820, 1252
Ksp22I TGATCA 1 cut(s) 772
Kzo9I GATC 9 cut(s) 4, 205, 526, 550, 589, 772, 813, 882, 1137
LmnI GCTCC 5 cut(s) 94, 370, 767, 1120, 1271
Lsp1109I GCAGC 8 cut(s) 100, 592, 595, 1141, 1153, 1222, 1225, 1261
LweI GCATC 5 cut(s) 169, 430, 716, 799, 1222
MaeI CTAG 3 cut(s) 101, 266, 530
MaeII ACGT 2 cut(s) 910, 1288
MaeIII GTNAC 3 cut(s) 245, 890, 986
MalI GATC 9 cut(s) 6, 207, 528, 552, 591, 774, 815, 884, 1139
MboI GATC 9 cut(s) 4, 205, 526, 550, 589, 772, 813, 882, 1137
MboII GAAGA 6 cut(s) 95, 100, 596, 599, 695, 749
MfeI CAATTG 1 cut(s) 750
MflI RGATCY 1 cut(s) 589
MhlI GDGCHC 2 cut(s) 1060, 1225
MluCI AATT 5 cut(s) 22, 750, 841, 915, 1089
MmeI TCCRAC 1 cut(s) 676
MseI TTAA 8 cut(s) 213, 285, 336, 375, 711, 836, 1077, 1181
MslI CAYNNNNRTG 1 cut(s) 673
MspA1I CMGCKG 1 cut(s) 1049
MspI CCGG 2 cut(s) 306, 1083
MspR9I CCNGG 2 cut(s) 858, 1226
MunI CAATTG 1 cut(s) 750
Mva1269I GAATGC 1 cut(s) 1305
MvaI CCWGG 2 cut(s) 858, 1226
MvnI CGCG 2 cut(s) 762, 1007
MwoI GCNNNNNNNGC 6 cut(s) 110, 188, 1055, 1151, 1163, 1244
NcoI CCATGG 1 cut(s) 1248
NdeI CATATG 1 cut(s) 949
NdeII GATC 9 cut(s) 4, 205, 526, 550, 589, 772, 813, 882, 1137
NlaIII CATG 6 cut(s) 220, 253, 672, 809, 820, 1252
NlaIV GGNNCC 3 cut(s) 493, 1122, 1246
NmuCI GTSAC 1 cut(s) 986
NspI RCATGY 2 cut(s) 253, 672
PagI TCATGA 1 cut(s) 816
PasI CCCWGGG 1 cut(s) 1225
PcsI WCGNNNNNNNCGW 1 cut(s) 1300
PctI GAATGC 1 cut(s) 1305
PfeI GAWTC 3 cut(s) 42, 257, 1097
PflFI GACNNNGTC 1 cut(s) 1290
PkrI GCNGC 8 cut(s) 115, 607, 610, 1156, 1168, 1237, 1240, 1276
PmaCI CACGTG 1 cut(s) 911
PmlI CACGTG 1 cut(s) 911
Ppu21I YACGTR 1 cut(s) 911
PpuMI RGGWCCY 1 cut(s) 658
Psp5II RGGWCCY 1 cut(s) 658
Psp6I CCWGG 2 cut(s) 856, 1224
PspCI CACGTG 1 cut(s) 911
PspFI CCCAGC 2 cut(s) 920, 1049
PspGI CCWGG 2 cut(s) 856, 1224
PspN4I GGNNCC 3 cut(s) 493, 1122, 1246
PspPI GGNCC 2 cut(s) 492, 658
PspPPI RGGWCCY 1 cut(s) 658
PsuI RGATCY 1 cut(s) 589
PsyI GACNNNGTC 1 cut(s) 1290
PvuII CAGCTG 1 cut(s) 1049
RseI CAYNNNNRTG 1 cut(s) 673
SaqAI TTAA 8 cut(s) 213, 285, 336, 375, 711, 836, 1077, 1181
SatI GCNGC 8 cut(s) 114, 606, 609, 1155, 1167, 1236, 1239, 1275
Sau3AI GATC 9 cut(s) 4, 205, 526, 550, 589, 772, 813, 882, 1137
Sau96I GGNCC 2 cut(s) 492, 658
ScrFI CCNGG 2 cut(s) 858, 1226
SduI GDGCHC 2 cut(s) 1060, 1225
SfaNI GCATC 5 cut(s) 169, 430, 716, 799, 1222
SfcI CTRYAG 2 cut(s) 849, 870
SinI GGWCC 1 cut(s) 658
SmiMI CAYNNNNRTG 1 cut(s) 673
SmlI CTYRAG 1 cut(s) 895
SmoI CTYRAG 1 cut(s) 895
Sse9I AATT 5 cut(s) 22, 750, 841, 915, 1089
SsiI CCGC 3 cut(s) 144, 762, 995
SspI AATATT 2 cut(s) 361, 454
SspMI CTAG 3 cut(s) 101, 266, 530
StyD4I CCNGG 2 cut(s) 856, 1224
StyI CCWWGG 2 cut(s) 661, 1248
TaaI ACNGT 6 cut(s) 110, 513, 540, 625, 850, 1198
TaiI ACGT 2 cut(s) 913, 1291
TaqI TCGA 4 cut(s) 81, 177, 553, 1043
TasI AATT 5 cut(s) 22, 750, 841, 915, 1089
TfiI GAWTC 3 cut(s) 42, 257, 1097
Tru1I TTAA 8 cut(s) 213, 285, 336, 375, 711, 836, 1077, 1181
Tru9I TTAA 8 cut(s) 213, 285, 336, 375, 711, 836, 1077, 1181
TscAI CASTG 2 cut(s) 619, 628
TseFI GTSAC 1 cut(s) 986
TseI GCWGC 8 cut(s) 113, 605, 608, 1154, 1166, 1235, 1238, 1274
Tsp45I GTSAC 1 cut(s) 986
TspDTI ATGAA 2 cut(s) 769, 928
TspRI CASTG 2 cut(s) 619, 628
Tth111I GACNNNGTC 1 cut(s) 1290
VneI GTGCAC 1 cut(s) 1056
VpaK11BI GGWCC 1 cut(s) 658
XapI RAATTY 2 cut(s) 22, 841
XceI RCATGY 2 cut(s) 253, 672
XspI CTAG 3 cut(s) 101, 266, 530
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.