Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006814

Physical Location & Seq

Genomic Coordinates Reverse (-)

4319490 .. 4330218

Gene Structure 10729 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G13330.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5436 bp

ATGCATCTGTACAATGAATGGTTACCGCCGCCTGTAGCGGAGGAGACGAAGAAGGAGAAAGAGTCCTTCGCGCGTGTCGTGAGATGCGTCAAAGAGTTGCACCGACCCGATGATCCAGAGTCTGTTTACGCCACTCTTAAATGGATCTCCGTTATCGAACTCTTTGTTAGAGCGAAAAGTGAATTGTCCGTGGAAGATGTTAGTGAACTCGTGGAAATTGGCTTACAAATTTTTCATTCATCTGAGAATAAGTTGTATGCACAGGTTAGATGGGGTAATGTTTTAGTCAGACTGATCAACAAGTTTCGTAAGAAGCTGTCTTTGAAAGTTCAGTGGAGGCCCTTGTATGATACCTTGATTCATGCTCATTTCAGCAGGAGCCCGGGTCCTGAAGGTTGGAGGTTAAGACAACGACACTTTATGGCTGTTACCTCCCTCATTCGTTCCTGTAGGAGATTTTTTCCACAAGGGGCCGCATCTGAGATATGGTCTGAATTCATGTCTCTTTTGGAGAATCCTTGGCATAATTCCTCGTTTGAGGGCTCTGGCTTTGTGAGATTGTTCCTTCCTACGAACCCCGAAAATCAGGATTTCTTCTCCGAAAAGTGGATAAAAAACGTTCTAGAGCTCTGGGATTCAATACCAAATTGTCAATTTTGGAATAGTCAATGGACATCTGTACTAGCTCGCGTGATAAAAAACTGCAGCTTTATCGACTGGGAGTCTTACTTGCCCATGCTTTTCAGTAGATTTTTGAATATGTTTGAGGTTCCTGTTGCAAATGGGAGTGGATCATATCCTTTCTCCGTTGATGTTCCCAGAAACACAAGATTCTTGTTCTCCAACAGGACTACTACTCCATCTAAATCAATTGCACAATCTATTGTATACTTTCTGAAACCTGGAAGTTCGGCACATGAGCAGTTAGAGAAATTGGTCAATCTCTTAGAACAGTATTATCATCCTTCTAATGGTGGCCGTTGGACTTATTCCTTGGAACGGTTTTTGCTTCACCTGGTGATAGCTTTCCAAAAGCGTTTACAGCGTGAGCAGCAAGATCCAGATAGTCTGCCAGCAACCTGTTTAGGAAAGCCGGAAAGGGTAGCTTTTGTTGGCGTGGTGTTGAAGTTGATTGATCGTGGTCAATATAGCAAGAACGAACATCTTTCCGAAACAGTTGCTGCAGCGACATCCATGTTGTCTTATGTGGAGCCTTCTTTGGTCCTTCCTTTTGTGGCTTCTCGGTTCCATTTGGCTTTGGAAACGACAACTGCCACCCACCAGTTGAAAACTGCTATGATGTCCGTAGCATTTGCTGGCCGGTCAATCCTGCAGTCTTCCATGTCAACTGCTAAATCACAAGATCTTGGTGGTGATGTGGACGATAGGATGTTTCTTGATCTTATTGGGATTTCTCTATCAAATGCATTGCTTGGTATGGATGCCAATGACCCCCCTAAAACCTTGGCCACTATGCAACTAATTGGCTCCATATTTTCCAATATGGCTGTTTTGGACGATAGTTCTGATGACTTATCATTCATGACAATGGCTTCCTTCTCGGAGTGGCTGGATGAATTTTTGTGTCGTTTGATTGCTTTGTTACAGCATTTGGAACCCAACAGTGTTATAAATGAAGGCCTAAGTTCATCTGCAACATCAGGAACGTTTTTGGTTGAGGATGGTCCATATTACTATTGCATGCTTGAAATCCTACTTGGAAGGCTATCTGGATCTCTATATAACCAGGCCTTGAAAAAGATATCAAAGTTTGTTCAGACAAATATCCTTCCTGGTGCAATTGCCGAGGTTGGGTTGCTTTGTTGTGCATGTGTTCATTCAACCCCCGAAGAAGCAGTTGCTCAAATTGTTGAACCAATGCTCCTTGCTGTTATATCTTCTCTGAAAGAAATCCCTGTCAATGGGTATGGAGGAAAAGGAAGTGCAGAGACCCTTGTTTCCAATAAGCAAGACAAACAAACACTTTCTCCAGCGCTTGAGGCAGCTATAGATTATCAGCTGAAAGTATTGTCAGTTGCCATCACTTATGGAGGCAGCTCACTTCTTCCGTACAAAGGTCTTTTGATCGAAGCTATATCTTCCGCATTTAATTCCTCATCTTGGAAGGTTAATGGAGCTGGGGATCATCTTCTTCGATCTCTCCTCGGAAGTCTGATTCTTTACTATCCTATTGATCAATACAAATGTTTGTCTCGTCACCCTGCTGCTCCTGCTTTGGAGGAATGGATAAGCACCAAAGCTTCTTCTAAGGATGAGCAGGTGGCGCATTCCAGGTGGCATGTTCCCACCCAAGAGGAAACTCAGTTTGCCAATGAGCTCTTAGATCTCCATCTTCAGTCAGCACTAGATGATCTTTTGAGTATTTGCCAATCGAACATCCACTCTGATGCAGGAGATGAGAAAACACACCTTAAAGTGACTCTATTGCGTATAGATTCTACATTGCAAGGTGTTTTGTCCTGCCTACCTGATTTCAGGCCATCACCTAGACATGATATGGTTGAAGATCTACAGTTCTTTATAGCTGGAGCATCGGGTTCATGTGTTGGCAGCGCTGAGATACGAGAAAAAACTGCTATAACTATTCATGCAGCCTGCAAATACTTGTTAGAGAAAAAGTCAGATGACAGCATCTTGTTGATATTAATAATCCGCATAATGGATGCCCTGGGAAACTATGGCAGTTTGGAGTATGATGAATGGTCAAATCACAGGCAGGCTTGGAAACTGGAATCCGCTGCGATTGTAGAGCCCCCAGCAAACTTTATTACTGAGTTTAATTCTAAGGGCAAGAGAAGGCCTAGATGGGCACTCATTGATAAAGCGTACATGCACAACACATGGAGATCATCACAATCGTCCTATCATCTGTTTCGTACAGATGGGAACTTCTCTCCACCAGAACCCTTAACATTTTTGGTTGATGATCTTTTGACCCTCTGTCTGCACAACTATGAAACTGTTCGAGTGCTTGCTGGAAAATCTTTGATAAAACTGTTAAAGAGATGGCCGCAGTTGCTTTCAAAGTGTGTTCTGTCCCTTACTGAGAACTTGCGAAAGCCGGATGTACAAGAATATGTAGTCCTTGGTTCTTGTGCCATTCTCTCTTCACACAGTGTTCTCAAGCATTTAACTACGGATCCAAAATCATTTTCCTCTTTTCTTCTTGGGATTCTTTCAAGTTCTCATCATGAATCTATGAAATCCCAAAAAGCAATCATTGAGCTTTTTGTCAAATATAATATTCACTTTGCGGGACTGTCGAGAAACATACTTCGCTCATTGGAAAGCCATGTTGAGGGCTCTACTTCTGGAGATCTTGTTTCTCAGATTGGCTCCATGAGTTTTGATTCTTCCAGCTTGCATTGGCGGTACAACTTGATGGCTAACAGAGTGCTCCTTCTGTTAGTTATGTCCTCTAGGATTGACCCAAGCTTCTCTCTCAAAATCCTTGATGAAACCGCTGGCCACTTCTTGAAAAACTTGAAAAGTCAACTTCCTCAGACCAGAATACTTGCCATTTCAGCTCTAAACATTCTACTTAAAGAGTCGCCTCATAAGATGCAAGGCAAGGATCAGCCTTCTGTGTCTTCACAAGAAACTGAAAATGCCAACTCATCCCTTGATTTAGCATTGAGCCAAATTTTTAGAGAAGAAGGATTCTTCAAGGAGACTTTTGAAAGTCTTTCTCATATTCATATCACTGACACAGATAGTTCCTCTAGAGGGAATCACGGAAGTTCATCTTTCCAGAGCATGGCGGACAAGTCAATCACTCGTTTCTATTTTGAATTTTCGGCTTCATGGCCTAGAACTCCTAGTTGGATATCTTTGTTAGGCAGTGATATATTTTACCCAAGTTTTGCTCGCATCTTCAAGCGATTAGCACAAGAATGTGGAGTGCCTGTGTTACTGGCACTAAAAAGCCCCTTAGAGGAGTTTTGTAACGCCAAGGAGAGACCAAAACAGTGTGTTGCTGCTGAAGCATTAGCAGGTGTACTGCACTCTGATGTTAATGGTCTTTTTAATGAGTGGGATAGCTGGATAATGGTTCAGTTGCAGAATGTTATTCTTGGCCAATCAGTAGAATCCATACCGGAGTGGGCTGCTTGCATACGTTATGCTGTCACAGGGAAAGGGAAGCAAGGAACCAAAATTCCTGTCATGAGACAACAAATTTTGGACTGTATAGTGGCACCATTACCACCAACTGCGACCACAACTGTTGTTGCAAAGCGGTATGCTTTTCTTTCGGCTGCTCTAATAGAACTATCTCCACCAAAGATGCCCGTAACAGAAGTGAAGCTGCATATCGTGCTTCTTGATGAGTTGATCTGTAATATGTCCCACTCCTCGGCACAAATAAGGGAAGCTATCGGTGTAATTCTTTCAGTATTATGTTCTAACATTCGGCTGCGGATGTCATATCAACAAGAATATCCAACTGAAGAAGGGAAAACGGATGTTGATAGCCAACTTAAGGAGGAAAATTGGTTCAAATTGATTAGTGCAAAAGCATCTGAAGCTGTAAAAAACATTCAACAAGCTAGCATATCAGATAGCTTGGACACTTCAACAGATGTAGATATGGGAAATGCTCAATCAAATGGCGATTCTCTTGATGATGTTAAATGGATGGAGACGCTCTTCCATTTCATTATCTCCTCTTTCAAATCTGGAAGAGCTTCGTATCTGCTAGACGTAATTGCTGGATTCCTCTATCCAGTGATGTCCTTACAGGAAACATCACATAAAGATCTGTCAATATTGGCCAAGGCAGCCTTTGAGCTGCTGAAGTGGCGAGTTTTCCCAGAGTCTCATCTACAGAAAGTTATTGGAGTCATTCTTTCTTCTGCTGATGACTCTAACTGGCGGATAAGATCTTCAACCCTGACATATCTGCGAACTTTTATGTATAGGCATACTTTCATCCTCACTCATGAAGATAAACAAAAAATCTGGAAAACAGTGGAAAAGCTCCTTGTTGACAGCCAAGTAGAGGTACGAGAGCATGCAGCAGCAGTTCTAGCAGGCCTAATGAAAGGAGGAGATGAAGATTTTGCTGCAGATTTTCGTGATAGATCCTATGCAGAGGCAAACTCAATCCAAAAGAGAAGAAATCGGAGGAAATCAAGTTCAACTCAGTCCATTGCGGGGGTGCATGGAGCCGTTCTTGGTTTGGTAGCTTCAGTTTTGTCTGTTCCTTATGACATGCCCAGCTGGCTGCCGGAGCATGTGACCTTACTGGCTCGGTTCGCGGGTGAACCTACACCTATAAAATCGACTGTGACTAAAGCAGTGGCTGAGTTCCGGCGAACCCATGCGGATACATGGAACATCCAGAAAGACTCATTCACCGAAGATCAGCTTGAGATCTTGGCCGATACATCTTCCTCTTCCTCGTACTTTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000502 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005839 GO:0006508 GO:0006807 GO:0008047 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009893 GO:0009987 GO:0010498 GO:0010499 GO:0010604 GO:0010952 GO:0016504 GO:0019222 GO:0019538 GO:0030162 GO:0030163 GO:0030234 GO:0031323 GO:0031325 GO:0032268 GO:0032270 GO:0032991 GO:0042393 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044093 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044877 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051336 GO:0051345 GO:0051603 GO:0052547 GO:0060255 GO:0061134 GO:0065007 GO:0065009 GO:0070577 GO:0070628 GO:0071704 GO:0080090 GO:0098772 GO:0140030 GO:0140033 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1905368 GO:1905369

KEGG Pathways

Metabolic & Signaling

ko03050 map03050

Pfam Domains

Protein Families

BLM10_mid DUF3437

Protein Analysis

1811

Amino Acids

202.94

Weight (kDa)

6.29

Isoelectric Point (pI)

52.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HEAT_PSME4_mid	PF16507	309 - 511	5.3e-29	Proteasome activator complex subunit 4, mid HEAT repeats region
HEAT_PSME4_mid	PF16507	506 - 825	5.6e-21	Proteasome activator complex subunit 4, mid HEAT repeats region
PSME4_C	PF11919	1727 - 1811	1.6e-28	Proteasome activator complex subunit 4-like, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0006814)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13330
fragaria_vesca	FvH4_3g41830 FvH4_3g41830 FvH4_3g41830 FvH4_3g41830 FvH4_3g41830 FvH4_3g41830 FvH4_3g41830 FvH4_3g41830
malus_domestica	MD00G1206400.v1.1 MD00G1206500.v1.1 MD00G1206600.v1.1 MD03G1040600.v1.1 MD11G1042000.v1.1
prunus_persica	Prupe.6G032900_v2.0.a1
pyrus_communis	pycom03g03130 pycom11g03610
rosa_chinensis	RchiOBHm_Chr5g0075021
rosa_laevigata	RLG00000036518
rosa_multiflora	Rmu_sc0006984.1_g000002
rosa_rugosa	Rorug05G0435500
rosa_samantha	Rh5AG492800 Rh5BG514100 Rh5CG537700 Rh5DG526400
rosa_wichuraiana	Rw5G045680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1631
AarI	CACCTGC	2 cut(s)	2269, 4004
Acc36I	ACCTGC	2 cut(s)	2269, 4004
AccB1I	GGYRCC	1 cut(s)	4216
AccB7I	CCANNNNNTGG	1 cut(s)	3778
AccI	GTMKAC	1 cut(s)	888
AccII	CGCG	4 cut(s)	71, 73, 690, 5279
AclI	AACGTT	2 cut(s)	618, 1667
AcoI	YGGCCR	8 cut(s)	976, 1318, 1467, 3029, 3487, 4096, 4791, 5400
AcsI	RAATTY	7 cut(s)	228, 494, 1577, 3663, 3812, 4176, 4197
AcuI	CTGAAG	7 cut(s)	411, 2339, 4023, 4488, 4563, 4835, 5193
AdeI	CACNNNGTG	2 cut(s)	1018, 3137
AfeI	AGCGCT	2 cut(s)	1995, 2575
AflII	CTTAAG	1 cut(s)	4499
AhdI	GACNNNNNGTC	2 cut(s)	721, 2961
AjnI	CCWGG	6 cut(s)	901, 1014, 1746, 1792, 2291, 2688
AjuI	GAANNNNNNNTTGG	6 cut(s)	1701, 1733, 3157, 3189, 3826, 3858
AloI	GAACNNNNNNTCC	8 cut(s)	1866, 1898, 4162, 4194, 4499, 4531, 5140, 5172
Alw21I	GWGCWC	3 cut(s)	630, 2340, 3420
Alw26I	GTCTC	9 cut(s)	38, 507, 1943, 2217, 3686, 3973, 4183, 4655, 4842
AlwNI	CAGNNNCTG	3 cut(s)	122, 1181, 5324
Ama87I	CYCGRG	1 cut(s)	382
Aor51HI	AGCGCT	2 cut(s)	1995, 2575
ApoI	RAATTY	7 cut(s)	228, 494, 1577, 3663, 3812, 4176, 4197
ArsI	GACNNNNNNTTYG	2 cut(s)	4167, 4199
AseI	ATTAAT	1 cut(s)	2666
Asp700I	GAANNNNTTC	2 cut(s)	2982, 4705
AspLEI	GCGC	4 cut(s)	73, 1996, 2287, 2576
AspS9I	GGNCC	5 cut(s)	339, 386, 471, 1222, 1685
AsuC2I	CCSGG	2 cut(s)	383, 384
AsuHPI	GGTGA	7 cut(s)	1004, 1030, 1385, 2210, 2496, 5294, 5368
AsuNHI	GCTAGC	1 cut(s)	4568
AvaI	CYCGRG	1 cut(s)	382
AvaII	GGWCC	3 cut(s)	386, 1222, 1685
BaeGI	GKGCMC	1 cut(s)	2833
BalI	TGGCCA	4 cut(s)	1469, 3489, 4098, 4793
BamHI	GGATCC	1 cut(s)	3160
BanI	GGYRCC	1 cut(s)	4216
BanII	GRGCYC	6 cut(s)	383, 545, 630, 2340, 2775, 3326
BauI	CACGAG	1 cut(s)	209
BbsI	GAAGAC	2 cut(s)	1329, 3603
Bbv12I	GWGCWC	3 cut(s)	630, 2340, 3420
BceAI	ACGGC	2 cut(s)	963, 5174
BcgI	CGANNNNNNTGC	4 cut(s)	694, 728, 1160, 1194
BciT130I	CCWGG	6 cut(s)	903, 1016, 1748, 1794, 2293, 2690
BciVI	GTATCC	1 cut(s)	5341
BclI	TGATCA	2 cut(s)	294, 2194
BcnI	CCSGG	2 cut(s)	383, 384
BcoDI	GTCTC	9 cut(s)	38, 507, 1943, 2217, 3686, 3973, 4183, 4655, 4842
BfmI	CTRYAG	9 cut(s)	33, 448, 703, 1182, 1331, 2007, 2531, 4844, 5085
BfoI	RGCGCY	2 cut(s)	1997, 2577
BfrI	CTTAAG	1 cut(s)	4499
BfuAI	ACCTGC	2 cut(s)	2269, 4004
BfuI	GTATCC	1 cut(s)	5341
BglI	GCCNNNNNGGC	1 cut(s)	5242
BglII	AGATCT	7 cut(s)	1363, 2344, 2527, 3337, 4777, 4901, 5394
Bme1390I	CCNGG	8 cut(s)	383, 384, 903, 1016, 1748, 1794, 2293, 2690
Bme18I	GGWCC	3 cut(s)	386, 1222, 1685
BmeRI	GACNNNNNGTC	2 cut(s)	721, 2961
BmeT110I	CYCGRG	1 cut(s)	382
BmgT120I	GGNCC	5 cut(s)	339, 386, 471, 1222, 1685
BmrFI	CCNGG	8 cut(s)	383, 384, 903, 1016, 1748, 1794, 2293, 2690
BmrI	ACTGGG	1 cut(s)	727
BmtI	GCTAGC	1 cut(s)	4572
BmuI	ACTGGG	1 cut(s)	727
BpiI	GAAGAC	2 cut(s)	1329, 3603
BplI	GAGNNNNNCTC	2 cut(s)	5105, 5137
BpmI	CTGGAG	3 cut(s)	1974, 2568, 3354
BpuEI	CTTGAG	3 cut(s)	2018, 3128, 5411
BpuMI	CCSGG	2 cut(s)	383, 384
BsaBI	GATNNNNATC	1 cut(s)	2349
BsaI	GGTCTC	2 cut(s)	1943, 3973
BsaWI	WCCGGW	1 cut(s)	4117
Bse118I	RCCGGY	1 cut(s)	1320
Bse1I	ACTGG	7 cut(s)	722, 1282, 2754, 3939, 4745, 4895, 5271
Bse3DI	GCAATG	3 cut(s)	1427, 2462, 5169
Bse8I	GATNNNNATC	1 cut(s)	2349
BseBI	CCWGG	6 cut(s)	903, 1016, 1748, 1794, 2293, 2690
BseJI	GATNNNNATC	1 cut(s)	2349
BseMI	GCAATG	3 cut(s)	1427, 2462, 5169
BseNI	ACTGG	7 cut(s)	722, 1282, 2754, 3939, 4745, 4895, 5271
BseRI	GAGGAG	6 cut(s)	56, 2153, 3971, 4363, 4675, 5082
BseSI	GKGCMC	1 cut(s)	2833
BseYI	CCCAGC	3 cut(s)	2138, 2776, 5237
BsgI	GTGCAG	3 cut(s)	1965, 2951, 4007
Bsh1236I	CGCG	4 cut(s)	71, 73, 690, 5279
BshNI	GGYRCC	1 cut(s)	4216
BsiHKAI	GWGCWC	3 cut(s)	630, 2340, 3420
BsiHKCI	CYCGRG	1 cut(s)	382
BsiSI	CCGG	7 cut(s)	383, 1094, 1321, 3083, 4118, 5249, 5332
BslFI	GGGAC	3 cut(s)	3043, 3291, 4351
BsmAI	GTCTC	9 cut(s)	38, 507, 1943, 2217, 3686, 3973, 4183, 4655, 4842
BsmBI	CGTCTC	2 cut(s)	38, 4655
BsmFI	GGGAC	3 cut(s)	3043, 3291, 4351
BsmI	GAATGC	1 cut(s)	2287
Bso31I	GGTCTC	2 cut(s)	1943, 3973
BsoBI	CYCGRG	1 cut(s)	382
Bsp1286I	GDGCHC	8 cut(s)	383, 545, 630, 2340, 2775, 2833, 3326, 3420
Bsp1407I	TGTACA	2 cut(s)	9, 3088
BspFNI	CGCG	4 cut(s)	71, 73, 690, 5279
BspHI	TCATGA	4 cut(s)	1542, 3211, 4185, 4960
BspMAI	CTGCAG	4 cut(s)	707, 1186, 1335, 5089
BspMI	ACCTGC	2 cut(s)	2269, 4004
BspOI	GCTAGC	1 cut(s)	4572
BspQI	GCTCTTC	2 cut(s)	4673, 4696
BspT107I	GGYRCC	1 cut(s)	4216
BspTI	CTTAAG	1 cut(s)	4499
BspTNI	GGTCTC	2 cut(s)	1943, 3973
BsrDI	GCAATG	3 cut(s)	1427, 2462, 5169
BsrFI	RCCGGY	1 cut(s)	1320
BsrGI	TGTACA	2 cut(s)	9, 3088
BsrI	ACTGG	7 cut(s)	722, 1282, 2754, 3939, 4745, 4895, 5271
BssAI	RCCGGY	1 cut(s)	1320
BssNAI	GTATAC	1 cut(s)	889
BssSI	CACGAG	1 cut(s)	209
BssT1I	CCWWGG	6 cut(s)	518, 993, 1464, 3106, 3972, 4794
Bst1107I	GTATAC	1 cut(s)	889
Bst2BI	CACGAG	1 cut(s)	209
Bst2UI	CCWGG	6 cut(s)	903, 1016, 1748, 1794, 2293, 2690
Bst6I	CTCTTC	4 cut(s)	3133, 4673, 4696, 5422
BstAFI	CTTAAG	1 cut(s)	4499
BstAPI	GCANNNNNTGC	1 cut(s)	4336
BstAUI	TGTACA	2 cut(s)	9, 3088
BstDSI	CCRYGG	1 cut(s)	189
BstEII	GGTNACC	1 cut(s)	21
BstFNI	CGCG	4 cut(s)	71, 73, 690, 5279
BstH2I	RGCGCY	2 cut(s)	1997, 2577
BstHHI	GCGC	4 cut(s)	73, 1996, 2287, 2576
BstMAI	GTCTC	9 cut(s)	38, 507, 1943, 2217, 3686, 3973, 4183, 4655, 4842
BstNI	CCWGG	6 cut(s)	903, 1016, 1748, 1794, 2293, 2690
BstNSI	RCATGY	7 cut(s)	1705, 1833, 2303, 2854, 5036, 5236, 5258
BstPI	GGTNACC	1 cut(s)	21
BstSCI	CCNGG	8 cut(s)	381, 382, 901, 1014, 1746, 1792, 2291, 2688
BstSFI	CTRYAG	9 cut(s)	33, 448, 703, 1182, 1331, 2007, 2531, 4844, 5085
BstSLI	GKGCMC	1 cut(s)	2833
BstUI	CGCG	4 cut(s)	71, 73, 690, 5279
BstV2I	GAAGAC	2 cut(s)	1329, 3603
BstZ17I	GTATAC	1 cut(s)	889
BsuI	GTATCC	1 cut(s)	5341
BtgI	CCRYGG	1 cut(s)	189
BtsI	GCAGTG	2 cut(s)	3868, 5325
BtsIMutI	CAGTG	9 cut(s)	338, 1630, 3142, 3723, 3868, 3995, 4752, 4995, 5325
BveI	ACCTGC	2 cut(s)	2269, 4004
CaiI	CAGNNNCTG	3 cut(s)	122, 1181, 5324
CciI	TCATGA	4 cut(s)	1542, 3211, 4185, 4960
CfoI	GCGC	4 cut(s)	73, 1996, 2287, 2576
Cfr10I	RCCGGY	1 cut(s)	1320
Cfr13I	GGNCC	5 cut(s)	339, 386, 471, 1222, 1685
Cfr9I	CCCGGG	1 cut(s)	382
CseI	GACGC	2 cut(s)	76, 4672
CsiI	ACCWGGT	1 cut(s)	1014
CspCI	CAANNNNNGTGG	2 cut(s)	4228, 4263
DraIII	CACNNNGTG	2 cut(s)	1018, 3137
DriI	GACNNNNNGTC	2 cut(s)	721, 2961
EaeI	YGGCCR	8 cut(s)	976, 1318, 1467, 3029, 3487, 4096, 4791, 5400
Eam1104I	CTCTTC	4 cut(s)	3133, 4673, 4696, 5422
Eam1105I	GACNNNNNGTC	2 cut(s)	721, 2961
EarI	CTCTTC	4 cut(s)	3133, 4673, 4696, 5422
EciI	GGCGGA	2 cut(s)	3797, 4909
Ecl136II	GAGCTC	2 cut(s)	628, 2338
Eco130I	CCWWGG	6 cut(s)	518, 993, 1464, 3106, 3972, 4794
Eco147I	AGGCCT	4 cut(s)	1641, 1751, 2821, 5055
Eco24I	GRGCYC	6 cut(s)	383, 545, 630, 2340, 2775, 3326
Eco31I	GGTCTC	2 cut(s)	1943, 3973
Eco32I	GATATC	2 cut(s)	1764, 3849
Eco47I	GGWCC	3 cut(s)	386, 1222, 1685
Eco47III	AGCGCT	2 cut(s)	1995, 2575
Eco53kI	GAGCTC	2 cut(s)	628, 2338
Eco57I	CTGAAG	7 cut(s)	411, 2339, 4023, 4488, 4563, 4835, 5193
Eco88I	CYCGRG	1 cut(s)	382
Eco91I	GGTNACC	1 cut(s)	21
EcoICRI	GAGCTC	2 cut(s)	628, 2338
EcoO109I	RGGNCCY	2 cut(s)	339, 386
EcoO65I	GGTNACC	1 cut(s)	21
EcoRI	GAATTC	1 cut(s)	494
EcoRII	CCWGG	6 cut(s)	901, 1014, 1746, 1792, 2291, 2688
EcoRV	GATATC	2 cut(s)	1764, 3849
EcoT14I	CCWWGG	6 cut(s)	518, 993, 1464, 3106, 3972, 4794
EcoT22I	ATGCAT	2 cut(s)	6, 1429
EcoT38I	GRGCYC	6 cut(s)	383, 545, 630, 2340, 2775, 3326
ErhI	CCWWGG	6 cut(s)	518, 993, 1464, 3106, 3972, 4794
Esp3I	CGTCTC	2 cut(s)	38, 4655
FalI	AAGNNNNNCTT	8 cut(s)	1090, 1122, 3751, 3783, 4787, 4819, 5373, 5405
FaqI	GGGAC	3 cut(s)	3043, 3291, 4351
FauI	CCCGC	3 cut(s)	3268, 5167, 5272
FbaI	TGATCA	2 cut(s)	294, 2194
FblI	GTMKAC	1 cut(s)	888
FriOI	GRGCYC	6 cut(s)	383, 545, 630, 2340, 2775, 3326
GlaI	GCGC	4 cut(s)	72, 1995, 2286, 2575
GsaI	CCCAGC	3 cut(s)	2142, 2780, 5241
GsuI	CTGGAG	3 cut(s)	1974, 2568, 3354
HaeII	RGCGCY	2 cut(s)	1997, 2577
HapII	CCGG	7 cut(s)	383, 1094, 1321, 3083, 4118, 5249, 5332
HgaI	GACGC	2 cut(s)	76, 4672
HhaI	GCGC	4 cut(s)	73, 1996, 2287, 2576
Hin6I	GCGC	4 cut(s)	71, 1994, 2285, 2574
HinP1I	GCGC	4 cut(s)	71, 1994, 2285, 2574
HincII	GTYRAC	3 cut(s)	1347, 3515, 5008
HindII	GTYRAC	3 cut(s)	1347, 3515, 5008
HindIII	AAGCTT	2 cut(s)	2259, 3454
HpaII	CCGG	7 cut(s)	383, 1094, 1321, 3083, 4118, 5249, 5332
HphI	GGTGA	7 cut(s)	1004, 1030, 1385, 2210, 2496, 5294, 5368
HpyCH4IV	ACGT	4 cut(s)	618, 1667, 4138, 4722
HpySE526I	ACGT	4 cut(s)	618, 1667, 4138, 4722
HspAI	GCGC	4 cut(s)	71, 1994, 2285, 2574
Ksp22I	TGATCA	2 cut(s)	294, 2194
LguI	GCTCTTC	2 cut(s)	4673, 4696
MabI	ACCWGGT	1 cut(s)	1014
MaeII	ACGT	4 cut(s)	618, 1667, 4138, 4722
MfeI	CAATTG	2 cut(s)	870, 1800
MhlI	GDGCHC	8 cut(s)	383, 545, 630, 2340, 2775, 2833, 3326, 3420
MlsI	TGGCCA	4 cut(s)	1469, 3489, 4098, 4793
MluNI	TGGCCA	4 cut(s)	1469, 3489, 4098, 4793
MlyI	GAGTC	9 cut(s)	71, 128, 731, 2434, 3578, 4844, 4869, 4877, 5363
MmeI	TCCRAC	5 cut(s)	377, 867, 962, 3824, 4487
Mox20I	TGGCCA	4 cut(s)	1469, 3489, 4098, 4793
Mph1103I	ATGCAT	2 cut(s)	6, 1429
MroXI	GAANNNNTTC	2 cut(s)	2982, 4705
MscI	TGGCCA	4 cut(s)	1469, 3489, 4098, 4793
MslI	CAYNNNNRTG	5 cut(s)	1547, 2406, 2973, 3913, 4029
Msp20I	TGGCCA	4 cut(s)	1469, 3489, 4098, 4793
MspA1I	CMGCKG	4 cut(s)	2020, 2759, 3485, 5241
MspCI	CTTAAG	1 cut(s)	4499
MspI	CCGG	7 cut(s)	383, 1094, 1321, 3083, 4118, 5249, 5332
MspR9I	CCNGG	8 cut(s)	383, 384, 903, 1016, 1748, 1794, 2293, 2690
MunI	CAATTG	2 cut(s)	870, 1800
Mva1269I	GAATGC	1 cut(s)	2287
MvaI	CCWGG	6 cut(s)	903, 1016, 1748, 1794, 2293, 2690
MvnI	CGCG	4 cut(s)	71, 73, 690, 5279
NciI	CCSGG	2 cut(s)	383, 384
NheI	GCTAGC	1 cut(s)	4568
NmeAIII	GCCGAG	2 cut(s)	1831, 4355
NmuCI	GTSAC	5 cut(s)	2216, 2437, 4147, 5257, 5308
NsiI	ATGCAT	2 cut(s)	6, 1429
NspI	RCATGY	7 cut(s)	1705, 1833, 2303, 2854, 5036, 5236, 5258
PaeI	GCATGC	2 cut(s)	1705, 5036
PagI	TCATGA	4 cut(s)	1542, 3211, 4185, 4960
PaqCI	CACCTGC	2 cut(s)	2269, 4004
PasI	CCCWGGG	1 cut(s)	2689
PceI	AGGCCT	4 cut(s)	1641, 1751, 2821, 5055
PciSI	GCTCTTC	2 cut(s)	4673, 4696
PcsI	WCGNNNNNNNCGW	2 cut(s)	75, 84
PctI	GAATGC	1 cut(s)	2287
PdmI	GAANNNNTTC	2 cut(s)	2982, 4705
PflMI	CCANNNNNTGG	1 cut(s)	3778
PleI	GAGTC	9 cut(s)	70, 127, 730, 2434, 3577, 4843, 4868, 4877, 5363
PpsI	GAGTC	9 cut(s)	70, 127, 730, 2434, 3577, 4843, 4868, 4877, 5363
PpuMI	RGGWCCY	1 cut(s)	386
PshBI	ATTAAT	1 cut(s)	2666
PsiI	TTATAA	1 cut(s)	1631
Psp124BI	GAGCTC	2 cut(s)	630, 2340
Psp1406I	AACGTT	2 cut(s)	618, 1667
Psp5II	RGGWCCY	1 cut(s)	386
Psp6I	CCWGG	6 cut(s)	901, 1014, 1746, 1792, 2291, 2688
PspEI	GGTNACC	1 cut(s)	21
PspFI	CCCAGC	3 cut(s)	2138, 2776, 5237
PspGI	CCWGG	6 cut(s)	901, 1014, 1746, 1792, 2291, 2688
PspPI	GGNCC	5 cut(s)	339, 386, 471, 1222, 1685
PspPPI	RGGWCCY	1 cut(s)	386
PstI	CTGCAG	4 cut(s)	707, 1186, 1335, 5089
PstNI	CAGNNNCTG	3 cut(s)	122, 1181, 5324
PvuII	CAGCTG	2 cut(s)	2020, 5241
RseI	CAYNNNNRTG	5 cut(s)	1547, 2406, 2973, 3913, 4029
SacI	GAGCTC	2 cut(s)	630, 2340
SapI	GCTCTTC	2 cut(s)	4673, 4696
Sau96I	GGNCC	5 cut(s)	339, 386, 471, 1222, 1685
SchI	GAGTC	9 cut(s)	71, 128, 731, 2434, 3578, 4844, 4869, 4877, 5363
ScrFI	CCNGG	8 cut(s)	383, 384, 903, 1016, 1748, 1794, 2293, 2690
SduI	GDGCHC	8 cut(s)	383, 545, 630, 2340, 2775, 2833, 3326, 3420
SexAI	ACCWGGT	1 cut(s)	1014
SfcI	CTRYAG	9 cut(s)	33, 448, 703, 1182, 1331, 2007, 2531, 4844, 5085
SinI	GGWCC	3 cut(s)	386, 1222, 1685
SmaI	CCCGGG	1 cut(s)	384
SmiMI	CAYNNNNRTG	5 cut(s)	1547, 2406, 2973, 3913, 4029
SmlI	CTYRAG	4 cut(s)	1997, 3143, 4499, 5390
SmoI	CTYRAG	4 cut(s)	1997, 3143, 4499, 5390
SphI	GCATGC	2 cut(s)	1705, 5036
SseBI	AGGCCT	4 cut(s)	1641, 1751, 2821, 5055
SspI	AATATT	2 cut(s)	3265, 4788
SstI	GAGCTC	2 cut(s)	630, 2340
StuI	AGGCCT	4 cut(s)	1641, 1751, 2821, 5055
StyD4I	CCNGG	8 cut(s)	381, 382, 901, 1014, 1746, 1792, 2291, 2688
StyI	CCWWGG	6 cut(s)	518, 993, 1464, 3106, 3972, 4794
TaiI	ACGT	4 cut(s)	621, 1670, 4141, 4725
TaqI	TCGA	8 cut(s)	156, 714, 2088, 2155, 2393, 2986, 3284, 5303
TatI	WGTACW	4 cut(s)	9, 679, 3088, 4018
TauI	GCSGC	3 cut(s)	31, 476, 3034
TscAI	CASTG	9 cut(s)	338, 1630, 3142, 3730, 3868, 3995, 4752, 4995, 5325
TseFI	GTSAC	5 cut(s)	2216, 2437, 4147, 5257, 5308
Tsp45I	GTSAC	5 cut(s)	2216, 2437, 4147, 5257, 5308
TspGWI	ACGGA	8 cut(s)	139, 178, 796, 1294, 2058, 3173, 3771, 4496
TspMI	CCCGGG	1 cut(s)	382
TspRI	CASTG	9 cut(s)	338, 1630, 3142, 3730, 3868, 3995, 4752, 4995, 5325
Van91I	CCANNNNNTGG	1 cut(s)	3778
Vha464I	CTTAAG	1 cut(s)	4499
VpaK11BI	GGWCC	3 cut(s)	386, 1222, 1685
VspI	ATTAAT	1 cut(s)	2666
XapI	RAATTY	7 cut(s)	228, 494, 1577, 3663, 3812, 4176, 4197
XbaI	TCTAGA	2 cut(s)	622, 3743
XceI	RCATGY	7 cut(s)	1705, 1833, 2303, 2854, 5036, 5236, 5258
XmaI	CCCGGG	1 cut(s)	382
XmiI	GTMKAC	1 cut(s)	888
XmnI	GAANNNNTTC	2 cut(s)	2982, 4705
Zsp2I	ATGCAT	2 cut(s)	6, 1429

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.