Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0006814

Physical Location & Seq

Genomic Coordinates Reverse (-)

2485944 .. 2494292

Gene Structure 8349 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g03130.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3627 bp

ATGAACATGAATTACCAACCAGTCTTCCCACAGGGCAGAAAGAAAATCCCAATCCGTCTCCCTCAGCTCTCTCTCAATTTCCCAACTTTCTTGTTCAGAAAGAAAGGCCGAAAACCCAAAGTCTTCAAATGCTCTCACTATAAATCCCTACACACTCTTAACAGCTTTTGCTCTCCCAAATTCATTTCCCTTTCTCATTCGGATCACCAATCGCAGAGCAAATCCTGCAAAAGTATGCATCTCTACAATGCATGGCTGCCGCCACCGGTGGCCGAGGAGTCGAAGAAAGAGAAGGAGTCCTTCTCCTGGGTTGTCTCCTCCGTCAAGAACTCGTACAAACCCGACGACCCTGAATCCGTCTATGCTACTCTCAAATGGGTTTCTGTTATCGACCTTTTCGTCAAGGCGAAAAGTGAAGTATCCTTGGAAGATGTAACTGCCCTTGTTGAATTTGGATTGGAATTGTTTTATGTATCGCAAAATAAGCTTTATGCCCAGGTTAGATGGGGAAACATCCTAGTCAAACTACTCAATAAGCATCGAAAGAAGTTGTCTTTGAAATTAAAATGGCGGCCTTTGTACGATACATTGATCCATACACATTTCACTAGGAATACAGGTCCAGAAGGCTGGAGATTGAGACAACGGCATTTTGAGGCTACTACTTCTCTTGTTCGGTCCTGCCGGAAGTTCTTCCCACCAGGATCTGCCTTTGAGATATGGTCTGAGTTTAGATCTTTATTAGAAAATCCCTGGCATAATTCATCCTTAGAGGGATCCGGGTTTGTTAGACTGTTTCTTCCTACAAACTTGGACAACCAGGACTTCTTCTCGCACGATTGGATTAAAGAGTTTTTCCGCCTTTGGGACTCGATACCAAATTGCCAATTTTGGAACAGTCAATGGGCAGCTGTTATAGCTCGTGTTGTAAAGAACTACAAGTTGATTGATTGGGAATGTTACTTGCCCACACTTTTCACCAGATACTTAAATATGTTTGAGGTTCCTGTGGCAAATGGAGGTGGATCATATCCATTCTCTGTGGATGTTCCAAGAAACACAAGATTCTTGTTCTCCAATAAAACAGTTACCCCAGCAAGGGCCATCGCAAAGTCCATTGTCAATTTGCTAAGGCCTGGTAGCTCAGCACAGCAGCATTTTGAAAAATTGGTCAACCTCTTAGAACAGTATTACCATCCTTCTAATGGTGGTCGCTGGACTTATGCATTAGAACGTTTTTTGCTCTATTTGGTAATTACATTCCAGAAACGCTTACAGCGTGAACAACTGAACATTGATAAAGATAGACGGGATGAACAGTACCTAGGAAGATCAGAAAGGAAGTTCTTTGTCAAGGTGGTGCTCAAGTTAATCGATCGTGGTCAATATAGCAAGAATGAACATCTTTCTGAAACAGTTGCTGCTGCAACTTCAATTTTGTCTTATGTGGAGCCTACTCTCGTCCTTCCTTTTGTCGCATCTCGCTTCCAAATGGCCTTGGAGACGATGACTGCCACCCACCAGTTGCAGATTGCAGTAACGTCGGTAGCATTTGTTGGGCGTTCATTGTTCCTCACATCCCTATCAGATTCTGCAGTAAAATTAGTTGATCCTGGTAATGGTGATGAGTTCATTGAGCTTTTGATGGTTTCACTATCCAACGCATTACTTGGTATGGATTACAATGATCCTCCTAAAACCTTAGCAACAATGCAATTAATTGGCTCTATATTTTCCAATATGTCTTCATTGGATGATAATATTGATGAACTATCAGTCATGCCAATGATTCGGTTTTCTGAATGGTTAGATGAGTTCTTGTGTCGTCTATTTTCCTTACTCTTACACCTGGAACCAAGCAGTGTTACGAATGAAGGCCTACATTCATCAGCAGCGTCAGGAACTTTTCTAGTTGAGGATGGTCCTTACTACTATTGCATGCTTGAAATCTTGCTCGGGAGACTTTCACAACCTCTCTATAATCAGGCTTTGAAGAAGATCTCCAAGTTTGTGAAGACAAATATTCTTCCTGGGGCAATTTCAGAGGTTGGACTGCTTTGTTGTGCATGCGTTCATTCCAACCCAGAAGAAGCGGTTACTCAACTTGTCAAGCCAGTTTTATTGTCTGTTATTTCTTCTTTGGAAGGAACACCGGCTACAGGATTTGGAGGTAGAGGAATATGTGACACTTCAGTGTCAACTAAGGTTAAGCCAACAATTTCTCCAGCTCTTGAAACAGCAATTGACTATCAATTAAAAGTAGTATCAGTTGCCATAAGTTATGGAGGTCCTGCACTTCTGCGCTACAAGGATCACTTCAAAGAGGCTATACTTTCTGCTTTTGAGTCACCATCTTGGAAGGTCAATGGAGCTGGTGATCATCTTCTTCGATCTCTCCTTGGAAGCCTGGTTCTTTATTATCCTATTGATCAGTACAAGTGTGTTTTGCTTCATCCAAATGCTGCTGCATTAGAGGAATGGATCAGCACCAAAGATTACTCAAATGATACACCATTGGCGGCCCCCAAGTGGCATATCCCAAGTGTCGAAGAAGTTGAATTTGCAAATGAACTCTTGGACTTTCATTTTCGGATGGCTTTGGATGATCTTTCGAGAATATGTGAAACTAAACTCCACTCTGATCCAGGAGATGAGAAAGATCACTTGAAAGTGACTCTTCTGCGTATAGATTCTTCATTGCAAGGTGTTTTGTCTTGCTTGCCTGACTTCACCCCGTCCTCAAAGAATGGGACTGTTGAACATCCAAATCATGCTGCTTTTCTAATAGCTGGAGCAACAGGTTCAACTGTTGGTACCACTAAATTGCGGGAAAAAGCTGCTGACATTATACATGCCGCCTGCAAATACATACTGGAGAAAAAATCAGATGATAGCATTCTGTTGATACTCATTATTCGTATTATGGATGCTTTAGGAAACTATGGAAGTTCGGAATATGATGAGTGGTCAAATCACAGGCAGGCATGGAAACTAGAATCTGCTGCCATTGTAGAACCTTCAGTAAACTTTATAGTTTCAGCTCAGTCTAAGGGGAAGAGAAGGCCGCGGTGGGCACTCATTGACAAGGCATTCATGCACAGTACTTGGAGATCATCACAATCATCTTATCATATATATCGTACTAATGGGAATTTCGGTCCACCAGACCATGTGAATCTTTTGGTGGATAATCTTCTAAATCTCTCATTGCATAGCTATGCAACTGTTCGTTTACTTGCTGGAAAATCTCTTTTAAAGATGATAAAGAGATGGCCATCTATGATTTCAAAGTGCGTCCTTTCTCTAACAGAGAATTTACGGAATCCCAAGTCACCAGAATATGCGGTGCTAGGTTCATGTGCAGTCCTTGCCACGCAGACAGTTCTCAAACATTTGACAATGGACCCAAAGGCGTTCTCTTCTTGTATTCTTGGAATTCTTTCAAGCTCTCATCATGAATCACTGAAAACCCAGAAAGCAATCAATGAGCTTTTTGTCAAATACAACATCCACTTTGCTGGAGTATCTAGAAGCATTTTCAGGGCATCAGGCAATAATACAGAAGCACCAGATTTTGCAGATTTGGTTTCTCAAAAGAAGAGGATCGATCACTTCTATGAGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000502 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005839 GO:0006508 GO:0006807 GO:0008047 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009893 GO:0009987 GO:0010498 GO:0010499 GO:0010604 GO:0010952 GO:0016504 GO:0019222 GO:0019538 GO:0030162 GO:0030163 GO:0030234 GO:0031323 GO:0031325 GO:0032268 GO:0032270 GO:0032991 GO:0042393 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044093 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044877 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051336 GO:0051345 GO:0051603 GO:0052547 GO:0060255 GO:0061134 GO:0065007 GO:0065009 GO:0070577 GO:0070628 GO:0071704 GO:0080090 GO:0098772 GO:0140030 GO:0140033 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1905368 GO:1905369

KEGG Pathways

Metabolic & Signaling

ko03050 map03050

Pfam Domains

Protein Families

BLM10_mid DUF3437

Protein Analysis

1209

Amino Acids

136.65

Weight (kDa)

8.89

Isoelectric Point (pI)

42.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006814)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13330
fragaria_vesca	FvH4_3g41830 FvH4_3g41830 FvH4_3g41830 FvH4_3g41830 FvH4_3g41830 FvH4_3g41830 FvH4_3g41830 FvH4_3g41830
malus_domestica	MD00G1206400.v1.1 MD00G1206500.v1.1 MD00G1206600.v1.1 MD03G1040600.v1.1 MD11G1042000.v1.1
prunus_persica	Prupe.6G032900_v2.0.a1
pyrus_communis	pycom03g03130 pycom11g03610
rosa_chinensis	RchiOBHm_Chr5g0075021
rosa_laevigata	RLG00000036518
rosa_multiflora	Rmu_sc0006984.1_g000002
rosa_rugosa	Rorug05G0435500
rosa_samantha	Rh5AG492800 Rh5BG514100 Rh5CG537700 Rh5DG526400
rosa_wichuraiana	Rw5G045680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	398
Acc65I	GGTACC	1 cut(s)	2813
AccB1I	GGYRCC	1 cut(s)	2813
AccII	CGCG	1 cut(s)	3067
AclI	AACGTT	1 cut(s)	1234
AcoI	YGGCCR	2 cut(s)	270, 3272
AcsI	RAATTY	6 cut(s)	179, 449, 2558, 3151, 3313, 3435
AcuI	CTGAAG	2 cut(s)	2175, 3003
AfaI	GTAC	7 cut(s)	335, 581, 1322, 2435, 2815, 3103, 3142
AfiI	CCNNNNNNNGG	8 cut(s)	306, 865, 1098, 1099, 1205, 1619, 2159, 2529
AgeI	ACCGGT	1 cut(s)	265
AleI	CACNNNNGTG	1 cut(s)	2192
AloI	GAACNNNNNNTCC	2 cut(s)	2394, 2426
Alw21I	GWGCWC	1 cut(s)	1365
Alw26I	GTCTC	5 cut(s)	62, 319, 634, 1496, 1954
AlwNI	CAGNNNCTG	3 cut(s)	707, 1421, 1592
Ama87I	CYCGRG	1 cut(s)	1955
ApoI	RAATTY	6 cut(s)	179, 449, 2558, 3151, 3313, 3435
AseI	ATTAAT	1 cut(s)	1718
AsiGI	ACCGGT	1 cut(s)	265
Asp700I	GAANNNNTTC	2 cut(s)	692, 3439
Asp718I	GGTACC	1 cut(s)	2813
AspA2I	CCTAGG	1 cut(s)	1324
AspLEI	GCGC	1 cut(s)	2304
AspS9I	GGNCC	8 cut(s)	620, 678, 1101, 1922, 2288, 2521, 3158, 3403
AsuC2I	CCSGG	1 cut(s)	781
AsuHPI	GGTGA	7 cut(s)	197, 970, 1634, 2340, 2387, 2722, 3324
AvaI	CYCGRG	1 cut(s)	1955
AvaII	GGWCC	6 cut(s)	620, 678, 1922, 2288, 3158, 3403
AvrII	CCTAGG	1 cut(s)	1324
BaeGI	GKGCMC	1 cut(s)	3076
BalI	TGGCCA	1 cut(s)	3274
BamHI	GGATCC	1 cut(s)	776
BanI	GGYRCC	1 cut(s)	2813
BarI	GAAGNNNNNNTAC	2 cut(s)	2677, 2709
BauI	CACGAG	1 cut(s)	921
BbsI	GAAGAC	4 cut(s)	16, 115, 1737, 2021
Bbv12I	GWGCWC	1 cut(s)	1365
BbvCI	CCTCAGC	1 cut(s)	63
BccI	CCATC	9 cut(s)	498, 1112, 1203, 1639, 1913, 2359, 2587, 3264, 3283
BceAI	ACGGC	1 cut(s)	662
BcgI	CGANNNNNNTGC	2 cut(s)	1524, 1558
BciVI	GTATCC	1 cut(s)	430
BclI	TGATCA	2 cut(s)	2377, 2428
BcnI	CCSGG	1 cut(s)	781
BcoDI	GTCTC	5 cut(s)	62, 319, 634, 1496, 1954
BfaI	CTAG	7 cut(s)	518, 609, 1325, 1910, 2993, 3350, 3528
BfmI	CTRYAG	2 cut(s)	1593, 2157
BfuI	GTATCC	1 cut(s)	430
BglII	AGATCT	2 cut(s)	734, 1998
BlnI	CCTAGG	1 cut(s)	1324
BlpI	GCTNAGC	1 cut(s)	1144
BmcAI	AGTACT	1 cut(s)	3103
Bme18I	GGWCC	6 cut(s)	620, 678, 1922, 2288, 3158, 3403
BmeT110I	CYCGRG	1 cut(s)	1955
BmgT120I	GGNCC	8 cut(s)	620, 678, 1101, 1922, 2288, 2521, 3158, 3403
BmiI	GGNNCC	7 cut(s)	778, 1005, 1452, 1854, 2523, 2815, 3405
BmsI	GCATC	5 cut(s)	247, 547, 1487, 2917, 3554
BpiI	GAAGAC	4 cut(s)	16, 115, 1737, 2021
BplI	GAGNNNNNCTC	2 cut(s)	287, 319
BpmI	CTGGAG	5 cut(s)	652, 2208, 2811, 2894, 3540
Bpu10I	CCTNAGC	3 cut(s)	63, 1130, 1702
Bpu1102I	GCTNAGC	1 cut(s)	1144
BpuEI	CTTGAG	1 cut(s)	1349
BpuMI	CCSGG	1 cut(s)	781
Bsa29I	ATCGAT	2 cut(s)	1374, 3606
BsaBI	GATNNNNATC	1 cut(s)	3274
BsaWI	WCCGGW	1 cut(s)	265
BsaXI	ACNNNNNCTCC	2 cut(s)	2206, 2236
Bsc4I	CCNNNNNNNGG	8 cut(s)	306, 865, 1098, 1099, 1205, 1619, 2159, 2529
Bse118I	RCCGGY	2 cut(s)	265, 2152
Bse1I	ACTGG	4 cut(s)	20, 1522, 2114, 2877
Bse3DI	GCAATG	2 cut(s)	2696, 3206
Bse8I	GATNNNNATC	1 cut(s)	3274
BseCI	ATCGAT	2 cut(s)	1374, 3606
BseJI	GATNNNNATC	1 cut(s)	3274
BseLI	CCNNNNNNNGG	8 cut(s)	306, 865, 1098, 1099, 1205, 1619, 2159, 2529
BseMI	GCAATG	2 cut(s)	2696, 3206
BseMII	CTCAG	4 cut(s)	77, 717, 1158, 3056
BseNI	ACTGG	4 cut(s)	20, 1522, 2114, 2877
BseRI	GAGGAG	2 cut(s)	290, 307
BseSI	GKGCMC	1 cut(s)	3076
BseYI	CCCAGC	1 cut(s)	1093
BsgI	GTGCAG	2 cut(s)	2277, 3381
Bsh1236I	CGCG	1 cut(s)	3067
Bsh1285I	CGRYCG	1 cut(s)	1378
BshNI	GGYRCC	1 cut(s)	2813
BshTI	ACCGGT	1 cut(s)	265
BshVI	ATCGAT	2 cut(s)	1374, 3606
BsiEI	CGRYCG	1 cut(s)	1378
BsiHKAI	GWGCWC	1 cut(s)	1365
BsiHKCI	CYCGRG	1 cut(s)	1955
BsiSI	CCGG	4 cut(s)	266, 685, 780, 2153
BslFI	GGGAC	2 cut(s)	881, 2764
BslI	CCNNNNNNNGG	8 cut(s)	306, 865, 1098, 1099, 1205, 1619, 2159, 2529
BsmAI	GTCTC	5 cut(s)	62, 319, 634, 1496, 1954
BsmBI	CGTCTC	2 cut(s)	62, 1496
BsmFI	GGGAC	2 cut(s)	881, 2764
BsmI	GAATGC	2 cut(s)	2895, 3089
BsoBI	CYCGRG	1 cut(s)	1955
Bsp1286I	GDGCHC	2 cut(s)	1365, 3076
Bsp1720I	GCTNAGC	1 cut(s)	1144
BspCNI	CTCAG	4 cut(s)	76, 718, 1157, 3055
BspDI	ATCGAT	2 cut(s)	1374, 3606
BspFNI	CGCG	1 cut(s)	3067
BspHI	TCATGA	1 cut(s)	3454
BspLI	GGNNCC	7 cut(s)	778, 1005, 1452, 1854, 2523, 2815, 3405
BspMAI	CTGCAG	1 cut(s)	1597
BspT107I	GGYRCC	1 cut(s)	2813
BsrDI	GCAATG	2 cut(s)	2696, 3206
BsrFI	RCCGGY	2 cut(s)	265, 2152
BsrI	ACTGG	4 cut(s)	20, 1522, 2114, 2877
BssAI	RCCGGY	2 cut(s)	265, 2152
BssSI	CACGAG	1 cut(s)	921
BssT1I	CCWWGG	4 cut(s)	423, 1324, 1497, 2398
Bst2BI	CACGAG	1 cut(s)	921
Bst6I	CTCTTC	4 cut(s)	2682, 3050, 3424, 3593
BstAPI	GCANNNNNTGC	2 cut(s)	225, 3368
BstC8I	GCNNGC	5 cut(s)	1940, 2068, 2720, 2860, 2982
BstDSI	CCRYGG	1 cut(s)	3065
BstFNI	CGCG	1 cut(s)	3067
BstHHI	GCGC	1 cut(s)	2304
BstMAI	GTCTC	5 cut(s)	62, 319, 634, 1496, 1954
BstMCI	CGRYCG	1 cut(s)	1378
BstMWI	GCNNNNNNNGC	4 cut(s)	225, 484, 917, 3368
BstNSI	RCATGY	3 cut(s)	1942, 2070, 2855
BstSFI	CTRYAG	2 cut(s)	1593, 2157
BstSLI	GKGCMC	1 cut(s)	3076
BstUI	CGCG	1 cut(s)	3067
BstV2I	GAAGAC	4 cut(s)	16, 115, 1737, 2021
BstX2I	RGATCY	4 cut(s)	704, 734, 776, 1998
BstXI	CCANNNNNNTGG	2 cut(s)	630, 3518
BstYI	RGATCY	4 cut(s)	704, 734, 776, 1998
Bsu15I	ATCGAT	2 cut(s)	1374, 3606
BsuI	GTATCC	1 cut(s)	430
BsuTUI	ATCGAT	2 cut(s)	1374, 3606
BtgI	CCRYGG	1 cut(s)	3065
BtgZI	GCGATG	1 cut(s)	1090
BtsI	GCAGTG	1 cut(s)	1867
BtsIMutI	CAGTG	3 cut(s)	1867, 2199, 3461
Cac8I	GCNNGC	5 cut(s)	1940, 2068, 2720, 2860, 2982
CaiI	CAGNNNCTG	3 cut(s)	707, 1421, 1592
CciI	TCATGA	1 cut(s)	3454
CfoI	GCGC	1 cut(s)	2304
Cfr10I	RCCGGY	2 cut(s)	265, 2152
Cfr13I	GGNCC	8 cut(s)	620, 678, 1101, 1922, 2288, 2521, 3158, 3403
Cfr42I	CCGCGG	1 cut(s)	3068
ClaI	ATCGAT	2 cut(s)	1374, 3606
CseI	GACGC	2 cut(s)	1884, 3283
Csp6I	GTAC	7 cut(s)	334, 580, 1321, 2434, 2814, 3102, 3141
CspAI	ACCGGT	1 cut(s)	265
CviQI	GTAC	7 cut(s)	334, 580, 1321, 2434, 2814, 3102, 3141
DraI	TTTAAA	1 cut(s)	3255
DrdI	GACNNNNNNGTC	1 cut(s)	398
DseDI	GACNNNNNNGTC	1 cut(s)	398
EaeI	YGGCCR	2 cut(s)	270, 3272
Eam1104I	CTCTTC	4 cut(s)	2682, 3050, 3424, 3593
EarI	CTCTTC	4 cut(s)	2682, 3050, 3424, 3593
EciI	GGCGGA	1 cut(s)	848
Eco130I	CCWWGG	4 cut(s)	423, 1324, 1497, 2398
Eco147I	AGGCCT	2 cut(s)	1135, 1878
Eco47I	GGWCC	6 cut(s)	620, 678, 1922, 2288, 3158, 3403
Eco57I	CTGAAG	2 cut(s)	2175, 3003
Eco88I	CYCGRG	1 cut(s)	1955
EcoO109I	RGGNCCY	1 cut(s)	2288
EcoRI	GAATTC	1 cut(s)	3435
EcoT14I	CCWWGG	4 cut(s)	423, 1324, 1497, 2398
EcoT22I	ATGCAT	3 cut(s)	240, 253, 1228
ErhI	CCWWGG	4 cut(s)	423, 1324, 1497, 2398
Esp3I	CGTCTC	2 cut(s)	62, 1496
FalI	AAGNNNNNCTT	6 cut(s)	284, 316, 2300, 2332, 2661, 2693
FaqI	GGGAC	2 cut(s)	881, 2764
FauI	CCCGC	1 cut(s)	2820
FbaI	TGATCA	2 cut(s)	2377, 2428
FspBI	CTAG	7 cut(s)	518, 609, 1325, 1910, 2993, 3350, 3528
GlaI	GCGC	1 cut(s)	2303
GsaI	CCCAGC	1 cut(s)	1097
GsuI	CTGGAG	5 cut(s)	652, 2208, 2811, 2894, 3540
HapII	CCGG	4 cut(s)	266, 685, 780, 2153
HgaI	GACGC	2 cut(s)	1884, 3283
HhaI	GCGC	1 cut(s)	2304
Hin6I	GCGC	1 cut(s)	2302
HinP1I	GCGC	1 cut(s)	2302
HincII	GTYRAC	2 cut(s)	1174, 2199
HindII	GTYRAC	2 cut(s)	1174, 2199
HindIII	AAGCTT	1 cut(s)	485
HpaII	CCGG	4 cut(s)	266, 685, 780, 2153
HphI	GGTGA	7 cut(s)	197, 970, 1634, 2340, 2387, 2722, 3324
Hpy166II	GTNNAC	6 cut(s)	1174, 1283, 2199, 3025, 3161, 3233
Hpy188III	TCNNGA	9 cut(s)	325, 623, 1264, 1899, 1957, 2231, 2613, 3455, 3528
Hpy8I	GTNNAC	6 cut(s)	1174, 1283, 2199, 3025, 3161, 3233
Hpy99I	CGWCG	2 cut(s)	347, 1546
HpyCH4IV	ACGT	2 cut(s)	1234, 1541
HpyF10VI	GCNNNNNNNGC	4 cut(s)	225, 484, 917, 3368
HpySE526I	ACGT	2 cut(s)	1234, 1541
HspAI	GCGC	1 cut(s)	2302
KpnI	GGTACC	1 cut(s)	2817
Ksp22I	TGATCA	2 cut(s)	2377, 2428
KspI	CCGCGG	1 cut(s)	3068
LmnI	GCTCC	3 cut(s)	1450, 2369, 2792
LweI	GCATC	5 cut(s)	247, 547, 1487, 2917, 3554
MaeI	CTAG	7 cut(s)	518, 609, 1325, 1910, 2993, 3350, 3528
MaeII	ACGT	2 cut(s)	1234, 1541
MfeI	CAATTG	1 cut(s)	2241
MflI	RGATCY	4 cut(s)	704, 734, 776, 1998
MhlI	GDGCHC	2 cut(s)	1365, 3076
MlsI	TGGCCA	1 cut(s)	3274
MluNI	TGGCCA	1 cut(s)	3274
MlyI	GAGTC	5 cut(s)	287, 305, 863, 2354, 2668
MmeI	TCCRAC	3 cut(s)	1683, 2029, 2103
Mox20I	TGGCCA	1 cut(s)	3274
Mph1103I	ATGCAT	3 cut(s)	240, 253, 1228
MroXI	GAANNNNTTC	2 cut(s)	692, 3439
MscI	TGGCCA	1 cut(s)	3274
MseI	TTAA	9 cut(s)	159, 563, 846, 989, 1370, 1718, 2208, 2255, 3254
MslI	CAYNNNNRTG	5 cut(s)	1784, 2192, 2457, 3216, 3615
Msp20I	TGGCCA	1 cut(s)	3274
MspA1I	CMGCKG	2 cut(s)	911, 3067
MspI	CCGG	4 cut(s)	266, 685, 780, 2153
MunI	CAATTG	1 cut(s)	2241
Mva1269I	GAATGC	2 cut(s)	2895, 3089
MvnI	CGCG	1 cut(s)	3067
MwoI	GCNNNNNNNGC	4 cut(s)	225, 484, 917, 3368
NciI	CCSGG	1 cut(s)	781
NlaIV	GGNNCC	7 cut(s)	778, 1005, 1452, 1854, 2523, 2815, 3405
NmeAIII	GCCGAG	1 cut(s)	298
NmuCI	GTSAC	4 cut(s)	2183, 2346, 2671, 3330
NsiI	ATGCAT	3 cut(s)	240, 253, 1228
NspI	RCATGY	3 cut(s)	1942, 2070, 2855
OliI	CACNNNNGTG	1 cut(s)	2192
PaeI	GCATGC	2 cut(s)	1942, 2070
PagI	TCATGA	1 cut(s)	3454
PceI	AGGCCT	2 cut(s)	1135, 1878
PcsI	WCGNNNNNNNCGW	2 cut(s)	396, 1276
PctI	GAATGC	2 cut(s)	2895, 3089
PdmI	GAANNNNTTC	2 cut(s)	692, 3439
PfeI	GAWTC	9 cut(s)	353, 1065, 1589, 1789, 2690, 2996, 3175, 3322, 3458
PfoI	TCCNGGA	1 cut(s)	2644
PinAI	ACCGGT	1 cut(s)	265
Ple19I	CGATCG	1 cut(s)	1378
PleI	GAGTC	5 cut(s)	286, 304, 863, 2353, 2668
PpsI	GAGTC	5 cut(s)	286, 304, 863, 2353, 2668
PpuMI	RGGWCCY	1 cut(s)	2288
PshBI	ATTAAT	1 cut(s)	1718
Psp1406I	AACGTT	1 cut(s)	1234
Psp5II	RGGWCCY	1 cut(s)	2288
PspFI	CCCAGC	1 cut(s)	1093
PspN4I	GGNNCC	7 cut(s)	778, 1005, 1452, 1854, 2523, 2815, 3405
PspPI	GGNCC	8 cut(s)	620, 678, 1101, 1922, 2288, 2521, 3158, 3403
PspPPI	RGGWCCY	1 cut(s)	2288
PsrI	GAACNNNNNNTAC	3 cut(s)	28, 2140, 2172
PstI	CTGCAG	1 cut(s)	1597
PstNI	CAGNNNCTG	3 cut(s)	707, 1421, 1592
PsuI	RGATCY	4 cut(s)	704, 734, 776, 1998
PvuI	CGATCG	1 cut(s)	1378
PvuII	CAGCTG	1 cut(s)	911
RsaI	GTAC	7 cut(s)	335, 581, 1322, 2435, 2815, 3103, 3142
RsaNI	GTAC	7 cut(s)	334, 580, 1321, 2434, 2814, 3102, 3141
RseI	CAYNNNNRTG	5 cut(s)	1784, 2192, 2457, 3216, 3615
SacII	CCGCGG	1 cut(s)	3068
SaqAI	TTAA	9 cut(s)	159, 563, 846, 989, 1370, 1718, 2208, 2255, 3254
Sau96I	GGNCC	8 cut(s)	620, 678, 1101, 1922, 2288, 2521, 3158, 3403
ScaI	AGTACT	1 cut(s)	3103
SchI	GAGTC	5 cut(s)	287, 305, 863, 2354, 2668
SduI	GDGCHC	2 cut(s)	1365, 3076
SfaNI	GCATC	5 cut(s)	247, 547, 1487, 2917, 3554
SfcI	CTRYAG	2 cut(s)	1593, 2157
Sfr303I	CCGCGG	1 cut(s)	3068
SgrAI	CRCCGGYG	1 cut(s)	265
SgrBI	CCGCGG	1 cut(s)	3068
SinI	GGWCC	6 cut(s)	620, 678, 1922, 2288, 3158, 3403
SmiMI	CAYNNNNRTG	5 cut(s)	1784, 2192, 2457, 3216, 3615
SmlI	CTYRAG	1 cut(s)	1364
SmoI	CTYRAG	1 cut(s)	1364
SphI	GCATGC	2 cut(s)	1942, 2070
SseBI	AGGCCT	2 cut(s)	1135, 1878
SspI	AATATT	2 cut(s)	1762, 2023
SspMI	CTAG	7 cut(s)	518, 609, 1325, 1910, 2993, 3350, 3528
StuI	AGGCCT	2 cut(s)	1135, 1878
StyI	CCWWGG	4 cut(s)	423, 1324, 1497, 2398
TaiI	ACGT	2 cut(s)	1237, 1544
TaqI	TCGA	9 cut(s)	281, 390, 541, 872, 1374, 2389, 2547, 2612, 3606
TaqII	GACCGA	2 cut(s)	666, 3146
TatI	WGTACW	2 cut(s)	2433, 3101
TauI	GCSGC	5 cut(s)	262, 574, 2522, 2858, 3067
TfiI	GAWTC	9 cut(s)	353, 1065, 1589, 1789, 2690, 2996, 3175, 3322, 3458
Tru1I	TTAA	9 cut(s)	159, 563, 846, 989, 1370, 1718, 2208, 2255, 3254
Tru9I	TTAA	9 cut(s)	159, 563, 846, 989, 1370, 1718, 2208, 2255, 3254
TscAI	CASTG	3 cut(s)	1867, 2199, 3468
TseFI	GTSAC	4 cut(s)	2183, 2346, 2671, 3330
Tsp45I	GTSAC	4 cut(s)	2183, 2346, 2671, 3330
TspGWI	ACGGA	4 cut(s)	44, 310, 346, 3334
TspRI	CASTG	3 cut(s)	1867, 2199, 3468
VpaK11BI	GGWCC	6 cut(s)	620, 678, 1922, 2288, 3158, 3403
VspI	ATTAAT	1 cut(s)	1718
XapI	RAATTY	6 cut(s)	179, 449, 2558, 3151, 3313, 3435
XbaI	TCTAGA	1 cut(s)	3527
XceI	RCATGY	3 cut(s)	1942, 2070, 2855
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1202
XmaJI	CCTAGG	1 cut(s)	1324
XmnI	GAANNNNTTC	2 cut(s)	692, 3439
XspI	CTAG	7 cut(s)	518, 609, 1325, 1910, 2993, 3350, 3528
ZrmI	AGTACT	1 cut(s)	3103
Zsp2I	ATGCAT	3 cut(s)	240, 253, 1228

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.