Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006610

Physical Location & Seq

Genomic Coordinates Reverse (-)

4957334 .. 4959704

Gene Structure 2371 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G14770.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 711 bp

ATGGATGTTTTTGCTTTCAATGCTTCTTTATCCATGTGTAAAGATGTTGCCGGAATCGCAGGCAACATATTTGCATTTGGACTCTTCGTTTCACCAATGCCAACGTTTAGGAGGATCATGAGGAACAAATCGACGGAGCAATTCTCCGGTTTACCATACATTTACGCTCTCTTAAACTGCTTGATCTGCCTTTGGTATGGCACACCTTTCATATCACACAGCAATGCCATGCTTATGACTGTGAATTCCGTTGGAGCTACGTTTCAGCTTTGCTACATTATCCTCTTCATCATGCATACAGACAAGAAGAACAAGATGAAGATGCTTGGTTTGCTTTTTGTGGTGTTTGCTGTGGTTGGAGTGATTGTAGCTGGAAGTTTGCAGATACCTGACCAGCTCACACGGTGGTACTTTGTCGGGTTCTTGAGCTGCGGTTCTCTTGTTTCAATGTTTGCCTCGCCGTTGTTTGTTATTAACCTAGTGATTCGGACTAAGAGCGTTGAGTTTATGCCGTTTTATCTCTCGCTATCGACTTTCTTGATGAGTGCTTCCTTCCTTCTTTACGGGTTATTCAACAGCGATGCCTTTGTTTATACACCAAATGGAATAGGAACGATTCTTGGCATTGTGCAGCTGGCTTTGTACTGTTACTACCACAGGAATTCTATAGAAGAAGAAACAAAAGAGCCTTTGATTGTTTCTTACGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0008150 GO:0008643 GO:0015144 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0034219 GO:0044425 GO:0044459 GO:0044464 GO:0051119 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MtN3_slv

Protein Analysis

236

Amino Acids

26.47

Weight (kDa)

8.5

Isoelectric Point (pI)

46.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MtN3_slv	PF03083	17 - 104	3.2e-19	Sugar efflux transporter for intercellular exchange
MtN3_slv	PF03083	138 - 221	9.1e-22	Sugar efflux transporter for intercellular exchange

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0006610)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14770
fragaria_vesca	FvH4_3g17630 FvH4_3g17630 FvH4_3g17630 FvH4_3g17630 FvH4_3g17630
malus_domestica	MD03G1250600.v1.1 MD11G1270800.v1.1
prunus_persica	Prupe.4G155700_v2.0.a1 Prupe.4G155700_v2.0.a1 Prupe.4G155700_v2.0.a1 Prupe.4G155700_v2.0.a1
pyrus_communis	pycom03g19830 pycom11g23950
rosa_chinensis	RchiOBHm_Chr5g0029361
rosa_laevigata	RLG00000033158
rosa_multiflora	Rmu_sc0000566.1_g000001
rosa_roxburghii	Rroxscaffold_1G00050640
rosa_rugosa	Rorug05G0113500 Rorug05G0113600 Rorug05G0113700.1
rosa_samantha	Rh5AG205500 Rh5BG204000 Rh5CG225900 Rh5DG207500
rosa_wichuraiana	Rw5G018710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	432
AclI	AACGTT	1 cut(s)	104
AclWI	GGATC	1 cut(s)	122
AcsI	RAATTY	2 cut(s)	244, 661
AdeI	CACNNNGTG	1 cut(s)	405
AfaI	GTAC	2 cut(s)	410, 644
AflIII	ACRYGT	1 cut(s)	705
AgsI	TTSAA	3 cut(s)	19, 447, 574
AluBI	AGCT	6 cut(s)	257, 268, 371, 397, 429, 634
AluI	AGCT	6 cut(s)	257, 268, 371, 397, 429, 634
AlwI	GGATC	1 cut(s)	122
ApeKI	GCWGC	2 cut(s)	429, 631
ApoI	RAATTY	2 cut(s)	244, 661
AsuHPI	GGTGA	1 cut(s)	84
BbvI	GCAGC	2 cut(s)	416, 643
BceAI	ACGGC	2 cut(s)	445, 496
BfaI	CTAG	1 cut(s)	479
BfmI	CTRYAG	1 cut(s)	666
BisI	GCNGC	2 cut(s)	430, 632
BlsI	GCNGC	2 cut(s)	431, 633
BmsI	GCATC	2 cut(s)	312, 571
BplI	GAGNNNNNCTC	2 cut(s)	128, 160
BpuEI	CTTGAG	1 cut(s)	445
BsaAI	YACGTR	1 cut(s)	706
BsaWI	WCCGGW	1 cut(s)	146
BsaXI	ACNNNNNCTCC	2 cut(s)	351, 381
Bse3DI	GCAATG	1 cut(s)	229
BseGI	GGATG	1 cut(s)	10
BseMI	GCAATG	1 cut(s)	229
BseXI	GCAGC	2 cut(s)	416, 643
BsgI	GTGCAG	1 cut(s)	650
BsiSI	CCGG	2 cut(s)	51, 147
Bsp143I	GATC	2 cut(s)	114, 183
BspACI	CCGC	1 cut(s)	432
BspHI	TCATGA	1 cut(s)	117
BspPI	GGATC	1 cut(s)	122
BsrDI	GCAATG	1 cut(s)	229
BssMI	GATC	2 cut(s)	114, 183
Bst4CI	ACNGT	3 cut(s)	241, 405, 647
Bst6I	CTCTTC	2 cut(s)	89, 290
BstBAI	YACGTR	1 cut(s)	706
BstC8I	GCNNGC	2 cut(s)	61, 636
BstDEI	CTNAG	1 cut(s)	492
BstF5I	GGATG	1 cut(s)	10
BstKTI	GATC	2 cut(s)	117, 186
BstMBI	GATC	2 cut(s)	114, 183
BstMWI	GCNNNNNNNGC	4 cut(s)	20, 56, 186, 331
BstSFI	CTRYAG	1 cut(s)	666
BstV1I	GCAGC	2 cut(s)	416, 643
BtgZI	GCGATG	1 cut(s)	594
BtsCI	GGATG	1 cut(s)	10
Cac8I	GCNNGC	2 cut(s)	61, 636
CciI	TCATGA	1 cut(s)	117
Csp6I	GTAC	2 cut(s)	409, 643
CviAII	CATG	4 cut(s)	34, 118, 229, 292
CviJI	RGCY	8 cut(s)	257, 268, 371, 397, 429, 634, 638, 688
CviKI_1	RGCY	8 cut(s)	257, 268, 371, 397, 429, 634, 638, 688
CviQI	GTAC	2 cut(s)	409, 643
DdeI	CTNAG	1 cut(s)	492
DpnI	GATC	2 cut(s)	116, 185
DpnII	GATC	2 cut(s)	114, 183
DraIII	CACNNNGTG	1 cut(s)	405
Eam1104I	CTCTTC	2 cut(s)	89, 290
EarI	CTCTTC	2 cut(s)	89, 290
EcoRI	GAATTC	2 cut(s)	244, 661
EcoT22I	ATGCAT	1 cut(s)	297
FaeI	CATG	4 cut(s)	37, 121, 232, 295
FatI	CATG	4 cut(s)	33, 117, 228, 291
Fnu4HI	GCNGC	2 cut(s)	430, 632
FokI	GGATG	1 cut(s)	17
Fsp4HI	GCNGC	2 cut(s)	430, 632
FspBI	CTAG	1 cut(s)	479
GluI	GCNGC	2 cut(s)	430, 632
HapII	CCGG	2 cut(s)	51, 147
Hin1II	CATG	4 cut(s)	37, 121, 232, 295
HinfI	GANTC	4 cut(s)	54, 81, 484, 616
HpaII	CCGG	2 cut(s)	51, 147
HphI	GGTGA	1 cut(s)	84
Hpy166II	GTNNAC	1 cut(s)	152
Hpy188I	TCNGA	1 cut(s)	489
Hpy188III	TCNNGA	3 cut(s)	118, 424, 538
Hpy8I	GTNNAC	1 cut(s)	152
Hpy99I	CGWCG	1 cut(s)	136
HpyAV	CCTTC	2 cut(s)	562, 566
HpyCH4III	ACNGT	3 cut(s)	241, 405, 647
HpyCH4IV	ACGT	3 cut(s)	104, 260, 705
HpyCH4V	TGCA	4 cut(s)	74, 295, 382, 631
HpyF10VI	GCNNNNNNNGC	4 cut(s)	20, 56, 186, 331
HpyF3I	CTNAG	1 cut(s)	492
HpySE526I	ACGT	3 cut(s)	104, 260, 705
Hsp92II	CATG	4 cut(s)	37, 121, 232, 295
Kzo9I	GATC	2 cut(s)	114, 183
LmnI	GCTCC	2 cut(s)	136, 254
LpnPI	CCDG	8 cut(s)	45, 64, 160, 357, 402, 407, 620, 643
Lsp1109I	GCAGC	2 cut(s)	416, 643
LweI	GCATC	2 cut(s)	312, 571
MaeI	CTAG	1 cut(s)	479
MaeII	ACGT	3 cut(s)	104, 260, 705
MaeIII	GTNAC	1 cut(s)	647
MalI	GATC	2 cut(s)	116, 185
MboI	GATC	2 cut(s)	114, 183
MboII	GAAGA	6 cut(s)	76, 277, 319, 331, 683, 686
MluCI	AATT	3 cut(s)	140, 244, 661
MlyI	GAGTC	1 cut(s)	75
MmeI	TCCRAC	2 cut(s)	232, 337
MnlI	CCTC	4 cut(s)	105, 114, 293, 466
Mph1103I	ATGCAT	1 cut(s)	297
MseI	TTAA	2 cut(s)	173, 474
MslI	CAYNNNNRTG	2 cut(s)	222, 233
MspA1I	CMGCKG	1 cut(s)	634
MspI	CCGG	2 cut(s)	51, 147
MwoI	GCNNNNNNNGC	4 cut(s)	20, 56, 186, 331
NdeII	GATC	2 cut(s)	114, 183
NlaIII	CATG	4 cut(s)	37, 121, 232, 295
NsiI	ATGCAT	1 cut(s)	297
PagI	TCATGA	1 cut(s)	117
PfeI	GAWTC	3 cut(s)	54, 484, 616
PkrI	GCNGC	2 cut(s)	431, 633
PleI	GAGTC	1 cut(s)	75
PpsI	GAGTC	1 cut(s)	75
Ppu21I	YACGTR	1 cut(s)	706
Psp1406I	AACGTT	1 cut(s)	104
PvuII	CAGCTG	1 cut(s)	634
RsaI	GTAC	2 cut(s)	410, 644
RsaNI	GTAC	2 cut(s)	409, 643
RseI	CAYNNNNRTG	2 cut(s)	222, 233
SaqAI	TTAA	2 cut(s)	173, 474
SatI	GCNGC	2 cut(s)	430, 632
Sau3AI	GATC	2 cut(s)	114, 183
SchI	GAGTC	1 cut(s)	75
SfaNI	GCATC	2 cut(s)	312, 571
SfcI	CTRYAG	1 cut(s)	666
SmiMI	CAYNNNNRTG	2 cut(s)	222, 233
SmlI	CTYRAG	1 cut(s)	424
SmoI	CTYRAG	1 cut(s)	424
Sse9I	AATT	3 cut(s)	140, 244, 661
SsiI	CCGC	1 cut(s)	432
SspMI	CTAG	1 cut(s)	479
TaaI	ACNGT	3 cut(s)	241, 405, 647
TaiI	ACGT	3 cut(s)	107, 263, 708
TaqI	TCGA	2 cut(s)	131, 530
TasI	AATT	3 cut(s)	140, 244, 661
TatI	WGTACW	1 cut(s)	642
TfiI	GAWTC	3 cut(s)	54, 484, 616
Tru1I	TTAA	2 cut(s)	173, 474
Tru9I	TTAA	2 cut(s)	173, 474
TseI	GCWGC	2 cut(s)	429, 631
TspDTI	ATGAA	3 cut(s)	199, 277, 332
TspGWI	ACGGA	2 cut(s)	149, 238
XapI	RAATTY	2 cut(s)	244, 661
XspI	CTAG	1 cut(s)	479
Zsp2I	ATGCAT	1 cut(s)	297

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.