pycom03g19830

Mediates both low-affinity uptake and efflux of sugar across the membrane

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
20477846 .. 20480490
2645 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g19830.2

Sequence Viewer

Length: 708 bp
ATGGTTTTTTCACCTTCAAATCCCGTGTTCTTAATCTGCAAAGATGCAGCTGGAATTGCAGGGAACATCTTTGCTTTTGGGCTGTTTGTTTCACCGATACACACATTTAGAAGAATAATGAGAAACCGTGCCACTGAAGAGTTCTCAGGGCTCCCATACATATATGCCCTTTTGAACTGCTTGATCAGCATGTGGTATGGATCGCCTATTATATCTCCTGATAACATAATGGTTATGACGGTCAATTCAGTTGGTGCGGTGTTTCAATTAGTGTACATAGCCCTCTTCATAATATACGCTGAGAAAACAAAAAAGATGAAGATGCTGGGATTGCTGGCAGCAGTTTGTGGTCTAATTGCAATCATAGTATATGGGAGCTTGCAAATTGCTGATGCTGCTATACGTCAGCTAGTTGTTGGAGTGCTTAGTTGTGCATCTCTAATATCAATGTTTGCTTCTCCTTTGTTTATAATTAACTTGGTGATCCGGACAAAGAGCGTCGAATTTATGCCATTCTATCTCTCCCTTTCCACCTTCCTCATGAGCACCTCTTTCTTGCTTTATGGAATTTTTAATTTTGATCTCTTTGTTTATGTCCCAAATGGAGTAGGAACCATTTTGGGGATTGTACAATTAGCGTTGTACTTTCATTATAAGGATTCGTCTAAAGGAAACTCCAGAGAACCGTTGATAGTTTCATATGCATAA

Protein Analysis

236

Amino Acids

25.95

Weight (kDa)

9.03

Isoelectric Point (pI)

45.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 470, 654
AccIII TCCGGA 1 cut(s) 486
AciI CCGC 1 cut(s) 257
AclWI GGATC 2 cut(s) 208, 478
AcsI RAATTY 2 cut(s) 503, 567
AcuI CTGAAG 1 cut(s) 156
AfaI GTAC 3 cut(s) 275, 630, 644
AfiI CCNNNNNNNGG 1 cut(s) 621
AgsI TTSAA 3 cut(s) 18, 175, 266
AluBI AGCT 3 cut(s) 50, 378, 409
AluI AGCT 3 cut(s) 50, 378, 409
Alw21I GWGCWC 1 cut(s) 548
AlwI GGATC 2 cut(s) 208, 478
Aor13HI TCCGGA 1 cut(s) 486
ApeKI GCWGC 3 cut(s) 47, 338, 395
ApoI RAATTY 2 cut(s) 503, 567
AsuHPI GGTGA 3 cut(s) 3, 84, 493
BanII GRGCYC 1 cut(s) 153
Bbv12I GWGCWC 1 cut(s) 548
BbvI GCAGC 3 cut(s) 59, 350, 382
BclI TGATCA 1 cut(s) 183
BfaI CTAG 1 cut(s) 410
BisI GCNGC 3 cut(s) 48, 339, 396
BlsI GCNGC 3 cut(s) 49, 340, 397
BmiI GGNNCC 2 cut(s) 152, 613
BmsI GCATC 4 cut(s) 34, 312, 382, 443
BpmI CTGGAG 1 cut(s) 661
BsaWI WCCGGW 1 cut(s) 486
Bsc4I CCNNNNNNNGG 1 cut(s) 621
BseAI TCCGGA 1 cut(s) 486
BseLI CCNNNNNNNGG 1 cut(s) 621
BseMII CTCAG 2 cut(s) 159, 291
BseXI GCAGC 3 cut(s) 59, 350, 382
BseYI CCCAGC 1 cut(s) 325
BsiHKAI GWGCWC 1 cut(s) 548
BsiSI CCGG 1 cut(s) 487
BslFI GGGAC 1 cut(s) 581
BslI CCNNNNNNNGG 1 cut(s) 621
BsmFI GGGAC 1 cut(s) 581
Bsp1286I GDGCHC 2 cut(s) 153, 548
Bsp13I TCCGGA 1 cut(s) 486
Bsp1407I TGTACA 2 cut(s) 273, 628
Bsp143I GATC 4 cut(s) 183, 200, 483, 580
BspACI CCGC 1 cut(s) 257
BspCNI CTCAG 2 cut(s) 158, 292
BspEI TCCGGA 1 cut(s) 486
BspHI TCATGA 1 cut(s) 540
BspLI GGNNCC 2 cut(s) 152, 613
BspPI GGATC 2 cut(s) 208, 478
BsrGI TGTACA 2 cut(s) 273, 628
BssMI GATC 4 cut(s) 183, 200, 483, 580
Bst4CI ACNGT 3 cut(s) 128, 241, 687
Bst6I CTCTTC 2 cut(s) 132, 290
BstAUI TGTACA 2 cut(s) 273, 628
BstC8I GCNNGC 2 cut(s) 336, 380
BstDEI CTNAG 3 cut(s) 145, 300, 425
BstKTI GATC 4 cut(s) 186, 203, 486, 583
BstMBI GATC 4 cut(s) 183, 200, 483, 580
BstMWI GCNNNNNNNGC 4 cut(s) 56, 186, 331, 395
BstNSI RCATGY 1 cut(s) 193
BstV1I GCAGC 3 cut(s) 59, 350, 382
BtsIMutI CAGTG 1 cut(s) 132
Cac8I GCNNGC 2 cut(s) 336, 380
CciI TCATGA 1 cut(s) 540
CseI GACGC 1 cut(s) 487
Csp6I GTAC 3 cut(s) 274, 629, 643
CviAII CATG 2 cut(s) 190, 541
CviJI RGCY 6 cut(s) 50, 82, 151, 281, 378, 409
CviKI_1 RGCY 6 cut(s) 50, 82, 151, 281, 378, 409
CviQI GTAC 3 cut(s) 274, 629, 643
DdeI CTNAG 3 cut(s) 145, 300, 425
DpnI GATC 4 cut(s) 185, 202, 485, 582
DpnII GATC 4 cut(s) 183, 200, 483, 580
Eam1104I CTCTTC 2 cut(s) 132, 290
EarI CTCTTC 2 cut(s) 132, 290
Eco24I GRGCYC 1 cut(s) 153
Eco57I CTGAAG 1 cut(s) 156
EcoT22I ATGCAT 1 cut(s) 706
EcoT38I GRGCYC 1 cut(s) 153
FaeI CATG 2 cut(s) 193, 544
FaqI GGGAC 1 cut(s) 581
FatI CATG 2 cut(s) 189, 540
FauNDI CATATG 1 cut(s) 700
FbaI TGATCA 1 cut(s) 183
Fnu4HI GCNGC 3 cut(s) 48, 339, 396
FriOI GRGCYC 1 cut(s) 153
Fsp4HI GCNGC 3 cut(s) 48, 339, 396
FspBI CTAG 1 cut(s) 410
GluI GCNGC 3 cut(s) 48, 339, 396
GsaI CCCAGC 1 cut(s) 329
GsuI CTGGAG 1 cut(s) 661
HapII CCGG 1 cut(s) 487
HgaI GACGC 1 cut(s) 487
Hin1II CATG 2 cut(s) 193, 544
HinfI GANTC 1 cut(s) 659
HpaII CCGG 1 cut(s) 487
HphI GGTGA 3 cut(s) 3, 84, 493
Hpy166II GTNNAC 1 cut(s) 274
Hpy188III TCNNGA 4 cut(s) 218, 487, 541, 678
Hpy8I GTNNAC 1 cut(s) 274
Hpy99I CGWCG 1 cut(s) 503
HpyAV CCTTC 2 cut(s) 24, 544
HpyCH4III ACNGT 3 cut(s) 128, 241, 687
HpyCH4IV ACGT 1 cut(s) 403
HpyCH4V TGCA 7 cut(s) 39, 47, 59, 359, 382, 434, 704
HpyF10VI GCNNNNNNNGC 4 cut(s) 56, 186, 331, 395
HpyF3I CTNAG 3 cut(s) 145, 300, 425
HpySE526I ACGT 1 cut(s) 403
Hsp92II CATG 2 cut(s) 193, 544
Kpn2I TCCGGA 1 cut(s) 486
Ksp22I TGATCA 1 cut(s) 183
Kzo9I GATC 4 cut(s) 183, 200, 483, 580
LmnI GCTCC 2 cut(s) 156, 375
LpnPI CCDG 8 cut(s) 36, 45, 132, 231, 311, 320, 500, 691
Lsp1109I GCAGC 3 cut(s) 59, 350, 382
LweI GCATC 4 cut(s) 34, 312, 382, 443
MaeI CTAG 1 cut(s) 410
MaeII ACGT 1 cut(s) 403
MalI GATC 4 cut(s) 185, 202, 485, 582
MboI GATC 4 cut(s) 183, 200, 483, 580
MboII GAAGA 4 cut(s) 123, 149, 277, 331
MhlI GDGCHC 2 cut(s) 153, 548
MmeI TCCRAC 1 cut(s) 397
MnlI CCTC 3 cut(s) 293, 548, 559
Mph1103I ATGCAT 1 cut(s) 706
MroI TCCGGA 1 cut(s) 486
MseI TTAA 3 cut(s) 32, 474, 573
MspA1I CMGCKG 1 cut(s) 50
MspI CCGG 1 cut(s) 487
MwoI GCNNNNNNNGC 4 cut(s) 56, 186, 331, 395
NdeI CATATG 1 cut(s) 700
NdeII GATC 4 cut(s) 183, 200, 483, 580
NlaIII CATG 2 cut(s) 193, 544
NlaIV GGNNCC 2 cut(s) 152, 613
NsiI ATGCAT 1 cut(s) 706
NspI RCATGY 1 cut(s) 193
PagI TCATGA 1 cut(s) 540
PfeI GAWTC 1 cut(s) 659
PkrI GCNGC 3 cut(s) 49, 340, 397
PsiI TTATAA 2 cut(s) 470, 654
PspFI CCCAGC 1 cut(s) 325
PspN4I GGNNCC 2 cut(s) 152, 613
PvuII CAGCTG 1 cut(s) 50
RsaI GTAC 3 cut(s) 275, 630, 644
RsaNI GTAC 3 cut(s) 274, 629, 643
SaqAI TTAA 3 cut(s) 32, 474, 573
SatI GCNGC 3 cut(s) 48, 339, 396
Sau3AI GATC 4 cut(s) 183, 200, 483, 580
SduI GDGCHC 2 cut(s) 153, 548
SetI ASST 7 cut(s) 16, 52, 380, 406, 411, 536, 551
SfaNI GCATC 4 cut(s) 34, 312, 382, 443
SsiI CCGC 1 cut(s) 257
SspMI CTAG 1 cut(s) 410
TaaI ACNGT 3 cut(s) 128, 241, 687
TaiI ACGT 1 cut(s) 406
TaqI TCGA 1 cut(s) 501
TatI WGTACW 3 cut(s) 273, 628, 642
TfiI GAWTC 1 cut(s) 659
Tru1I TTAA 3 cut(s) 32, 474, 573
Tru9I TTAA 3 cut(s) 32, 474, 573
TscAI CASTG 1 cut(s) 139
TseI GCWGC 3 cut(s) 47, 338, 395
TspDTI ATGAA 4 cut(s) 277, 332, 638, 687
TspRI CASTG 1 cut(s) 139
XapI RAATTY 2 cut(s) 503, 567
XceI RCATGY 1 cut(s) 193
XspI CTAG 1 cut(s) 410
Zsp2I ATGCAT 1 cut(s) 706
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.