Rh5DG207500

Mediates both low-affinity uptake and efflux of sugar across the membrane

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
23041096 .. 23044484
3389 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG207500.1

Sequence Viewer

Length: 702 bp
ATGTTTGTATATATAGAAGAAGTCCTCATTTATGCTAATCTTTTATTCGTTGCAGGCAATATCTTTGCTTTTGGGCTGTTTGTTTCACCCATGCCCACATTTAAAAGAATCATCAGAAATGGTTCAACTGAAGAGTTCTCAGGGCTGCCGTATATATATGCCCTTTTGAACTGCATGATCAGCATGTGGTATGGATCGCCTCTTATATCTACTGATAACATGTTGATTCTTACAGTCAATTCAGCTGGTGCAGTGTTTCAATTTGTCTACATAACCCTCTTCATAATCTATGCTGAGAAACCAAAAAAGGTGAGGATGCTGGGATTGCTGGTAGCAGTTTTTGGTCTATTTGCAATCATAGTCGTTGGGAGCTTGCAGATATCTGACCTTTTTCTCCGACGGACAATCGTTGGATTGCTTAGCTGTTTTTCTCTTATATCTATGTTTGCTTCTCCATTGTTTATAATAAACTTGGTGATTCGTACCAAGAGTGTTGAGTACATGCCATTTTATCTCTCCCTTTCCACCTTCCTAATGAGCACCTGTTTCCTTCTGTATGGAATTTTTAATTACGATCCGTACGTTTATGTCCCTAATGGGATAGGAACAATTTTGGGAATTGTACAATTGGCATTGTACTTTCACTATCATCGTTCATCAAAAGAAGACTCCAGAGAACCCTTGATAGTTTCATATGCATAA

Protein Analysis

233

Amino Acids

26.39

Weight (kDa)

8.36

Isoelectric Point (pI)

50.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MtN3_slv PF03083 14 - 101 6.4e-19 Sugar efflux transporter for intercellular exchange
MtN3_slv PF03083 136 - 219 3.5e-22 Sugar efflux transporter for intercellular exchange
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 464
AccI GTMKAC 1 cut(s) 267
AclWI GGATC 2 cut(s) 202, 569
AcsI RAATTY 1 cut(s) 561
AcuI CTGAAG 1 cut(s) 150
AfaI GTAC 5 cut(s) 484, 500, 581, 624, 638
AflIII ACRYGT 1 cut(s) 219
AgsI TTSAA 3 cut(s) 126, 169, 260
AluBI AGCT 3 cut(s) 245, 372, 423
AluI AGCT 3 cut(s) 245, 372, 423
Alw21I GWGCWC 1 cut(s) 542
AlwI GGATC 2 cut(s) 202, 569
ApeKI GCWGC 1 cut(s) 145
ApoI RAATTY 1 cut(s) 561
Asp700I GAANNNNTTC 1 cut(s) 121
AsuHPI GGTGA 3 cut(s) 78, 322, 487
BbsI GAAGAC 1 cut(s) 672
Bbv12I GWGCWC 1 cut(s) 542
BbvI GCAGC 1 cut(s) 132
BceAI ACGGC 1 cut(s) 133
BclI TGATCA 1 cut(s) 177
BisI GCNGC 1 cut(s) 146
BlpI GCTNAGC 1 cut(s) 419
BlsI GCNGC 1 cut(s) 147
BmsI GCATC 1 cut(s) 306
BpiI GAAGAC 1 cut(s) 672
BpmI CTGGAG 1 cut(s) 655
Bpu1102I GCTNAGC 1 cut(s) 419
BseGI GGATG 1 cut(s) 321
BseMII CTCAG 2 cut(s) 153, 285
BseXI GCAGC 1 cut(s) 132
BseYI CCCAGC 1 cut(s) 319
BsgI GTGCAG 1 cut(s) 270
BsiHKAI GWGCWC 1 cut(s) 542
BsiWI CGTACG 1 cut(s) 579
BslFI GGGAC 1 cut(s) 575
BsmFI GGGAC 1 cut(s) 575
Bsp1286I GDGCHC 1 cut(s) 542
Bsp1407I TGTACA 1 cut(s) 622
Bsp143I GATC 3 cut(s) 177, 194, 574
Bsp1720I GCTNAGC 1 cut(s) 419
BspCNI CTCAG 2 cut(s) 152, 286
BspPI GGATC 2 cut(s) 202, 569
BsrGI TGTACA 1 cut(s) 622
BssMI GATC 3 cut(s) 177, 194, 574
Bst4CI ACNGT 1 cut(s) 235
Bst6I CTCTTC 2 cut(s) 126, 284
BstAUI TGTACA 1 cut(s) 622
BstC8I GCNNGC 2 cut(s) 55, 374
BstDEI CTNAG 3 cut(s) 139, 294, 419
BstF5I GGATG 1 cut(s) 321
BstKTI GATC 3 cut(s) 180, 197, 577
BstMBI GATC 3 cut(s) 177, 194, 574
BstMWI GCNNNNNNNGC 2 cut(s) 180, 325
BstNSI RCATGY 3 cut(s) 187, 223, 505
BstV1I GCAGC 1 cut(s) 132
BstV2I GAAGAC 1 cut(s) 672
BtsCI GGATG 1 cut(s) 321
BtsI GCAGTG 1 cut(s) 258
BtsIMutI CAGTG 1 cut(s) 258
Cac8I GCNNGC 2 cut(s) 55, 374
Csp6I GTAC 5 cut(s) 483, 499, 580, 623, 637
CviAII CATG 5 cut(s) 91, 175, 184, 220, 502
CviJI RGCY 5 cut(s) 76, 145, 245, 372, 423
CviKI_1 RGCY 5 cut(s) 76, 145, 245, 372, 423
CviQI GTAC 5 cut(s) 483, 499, 580, 623, 637
DdeI CTNAG 3 cut(s) 139, 294, 419
DpnI GATC 3 cut(s) 179, 196, 576
DpnII GATC 3 cut(s) 177, 194, 574
DraI TTTAAA 1 cut(s) 103
Eam1104I CTCTTC 2 cut(s) 126, 284
EarI CTCTTC 2 cut(s) 126, 284
Eco32I GATATC 1 cut(s) 381
Eco57I CTGAAG 1 cut(s) 150
EcoRV GATATC 1 cut(s) 381
EcoT22I ATGCAT 1 cut(s) 700
FaeI CATG 5 cut(s) 94, 178, 187, 223, 505
FaqI GGGAC 1 cut(s) 575
FatI CATG 5 cut(s) 90, 174, 183, 219, 501
FauNDI CATATG 1 cut(s) 694
FbaI TGATCA 1 cut(s) 177
FblI GTMKAC 1 cut(s) 267
Fnu4HI GCNGC 1 cut(s) 146
FokI GGATG 1 cut(s) 328
Fsp4HI GCNGC 1 cut(s) 146
GluI GCNGC 1 cut(s) 146
GsaI CCCAGC 1 cut(s) 323
GsuI CTGGAG 1 cut(s) 655
Hin1II CATG 5 cut(s) 94, 178, 187, 223, 505
HinfI GANTC 4 cut(s) 108, 226, 478, 668
HphI GGTGA 3 cut(s) 78, 322, 487
Hpy166II GTNNAC 1 cut(s) 268
Hpy188I TCNGA 3 cut(s) 116, 385, 398
Hpy188III TCNNGA 1 cut(s) 672
Hpy8I GTNNAC 1 cut(s) 268
Hpy99I CGWCG 1 cut(s) 402
HpyAV CCTTC 2 cut(s) 538, 560
HpyCH4III ACNGT 1 cut(s) 235
HpyCH4IV ACGT 1 cut(s) 582
HpyCH4V TGCA 6 cut(s) 53, 174, 251, 353, 376, 698
HpyF10VI GCNNNNNNNGC 2 cut(s) 180, 325
HpyF3I CTNAG 3 cut(s) 139, 294, 419
HpySE526I ACGT 1 cut(s) 582
Hsp92II CATG 5 cut(s) 94, 178, 187, 223, 505
Ksp22I TGATCA 1 cut(s) 177
Kzo9I GATC 3 cut(s) 177, 194, 574
LmnI GCTCC 1 cut(s) 369
LpnPI CCDG 7 cut(s) 39, 126, 231, 305, 314, 556, 685
Lsp1109I GCAGC 1 cut(s) 132
LweI GCATC 1 cut(s) 306
MaeII ACGT 1 cut(s) 582
MalI GATC 3 cut(s) 179, 196, 576
MboI GATC 3 cut(s) 177, 194, 574
MboII GAAGA 4 cut(s) 29, 143, 271, 677
MfeI CAATTG 1 cut(s) 626
MhlI GDGCHC 1 cut(s) 542
MluCI AATT 7 cut(s) 238, 260, 561, 568, 609, 618, 626
MlyI GAGTC 1 cut(s) 662
MmeI TCCRAC 2 cut(s) 391, 421
MnlI CCTC 4 cut(s) 35, 210, 287, 306
Mph1103I ATGCAT 1 cut(s) 700
MroXI GAANNNNTTC 1 cut(s) 121
MseI TTAA 2 cut(s) 102, 567
MspA1I CMGCKG 1 cut(s) 245
MunI CAATTG 1 cut(s) 626
MwoI GCNNNNNNNGC 2 cut(s) 180, 325
NdeI CATATG 1 cut(s) 694
NdeII GATC 3 cut(s) 177, 194, 574
NlaIII CATG 5 cut(s) 94, 178, 187, 223, 505
NsiI ATGCAT 1 cut(s) 700
NspI RCATGY 3 cut(s) 187, 223, 505
PciI ACATGT 1 cut(s) 219
PcsI WCGNNNNNNNCGW 1 cut(s) 579
PdmI GAANNNNTTC 1 cut(s) 121
PfeI GAWTC 3 cut(s) 108, 226, 478
Pfl23II CGTACG 1 cut(s) 579
PkrI GCNGC 1 cut(s) 147
PleI GAGTC 1 cut(s) 662
PpsI GAGTC 1 cut(s) 662
PscI ACATGT 1 cut(s) 219
PsiI TTATAA 1 cut(s) 464
PspFI CCCAGC 1 cut(s) 319
PspLI CGTACG 1 cut(s) 579
PvuII CAGCTG 1 cut(s) 245
RsaI GTAC 5 cut(s) 484, 500, 581, 624, 638
RsaNI GTAC 5 cut(s) 483, 499, 580, 623, 637
SaqAI TTAA 2 cut(s) 102, 567
SatI GCNGC 1 cut(s) 146
Sau3AI GATC 3 cut(s) 177, 194, 574
SchI GAGTC 1 cut(s) 662
SduI GDGCHC 1 cut(s) 542
SetI ASST 8 cut(s) 247, 312, 374, 390, 425, 530, 545, 585
SfaNI GCATC 1 cut(s) 306
Sse9I AATT 7 cut(s) 238, 260, 561, 568, 609, 618, 626
TaaI ACNGT 1 cut(s) 235
TaiI ACGT 1 cut(s) 585
TasI AATT 7 cut(s) 238, 260, 561, 568, 609, 618, 626
TatI WGTACW 3 cut(s) 498, 622, 636
TfiI GAWTC 3 cut(s) 108, 226, 478
Tru1I TTAA 2 cut(s) 102, 567
Tru9I TTAA 2 cut(s) 102, 567
TscAI CASTG 1 cut(s) 258
TseI GCWGC 1 cut(s) 145
TspDTI ATGAA 3 cut(s) 271, 645, 681
TspGWI ACGGA 2 cut(s) 415, 567
TspRI CASTG 1 cut(s) 258
XapI RAATTY 1 cut(s) 561
XceI RCATGY 3 cut(s) 187, 223, 505
XmiI GTMKAC 1 cut(s) 267
XmnI GAANNNNTTC 1 cut(s) 121
Zsp2I ATGCAT 1 cut(s) 700
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.