Belongs to the ATCase OTCase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G20330 AT3G20330 |
| fragaria_vesca | FvH4_4g09330 FvH4_4g09330 FvH4_4g09330 FvH4_4g09330 FvH4_4g09330 FvH4_4g09330 FvH4_7g16631 FvH4_7g16631 |
| malus_domestica | MD15G1397500.v1.1 |
| prunus_persica | Prupe.4G221200_v2.0.a1 |
| pyrus_communis | pycom15g35730 |
| rosa_chinensis | RchiOBHm_Chr4g0402721 RchiOBHm_Chr6g0264841 |
| rosa_laevigata | RLG00000009051 RLG00000014232 |
| rosa_multiflora | Rmu_sc0000546.1_g000042 Rmu_sc0002451.1_g000002 |
| rosa_roxburghii | Rroxscaffold_175G00432030 Rroxscaffold_5G00347480 Rroxscaffold_7G00203190 |
| rosa_rugosa | Rorug04G0038000 Rorug06G0014400 |
| rosa_samantha | Rh4AG115600 Rh4BG108100 Rh4CG122500 Rh4DG108100 Rh6AG134700 Rh6BG132300 Rh6CG130900 Rh6DG117900 |
| rosa_wichuraiana | Rw4G009240 Rw6G011660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 614 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 751 |
| AatII | GACGTC | 1 cut(s) | 669 |
| Acc36I | ACCTGC | 1 cut(s) | 614 |
| AccB1I | GGYRCC | 1 cut(s) | 41 |
| AccI | GTMKAC | 1 cut(s) | 996 |
| AccII | CGCG | 2 cut(s) | 318, 494 |
| AciI | CCGC | 6 cut(s) | 39, 492, 573, 751, 858, 1071 |
| AclWI | GGATC | 3 cut(s) | 159, 1011, 1082 |
| AcsI | RAATTY | 1 cut(s) | 242 |
| AcuI | CTGAAG | 2 cut(s) | 9, 1090 |
| AcyI | GRCGYC | 2 cut(s) | 42, 666 |
| AdeI | CACNNNGTG | 1 cut(s) | 353 |
| AfaI | GTAC | 1 cut(s) | 409 |
| AfeI | AGCGCT | 1 cut(s) | 298 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 411, 498, 741 |
| AjiI | CACGTC | 1 cut(s) | 787 |
| AjnI | CCWGG | 2 cut(s) | 410, 634 |
| AluBI | AGCT | 9 cut(s) | 75, 221, 342, 590, 596, 977, 1031, 1097, 1153 |
| AluI | AGCT | 9 cut(s) | 75, 221, 342, 590, 596, 977, 1031, 1097, 1153 |
| Alw21I | GWGCWC | 1 cut(s) | 344 |
| Alw26I | GTCTC | 2 cut(s) | 720, 759 |
| AlwI | GGATC | 3 cut(s) | 159, 1011, 1082 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 599 |
| Aor51HI | AGCGCT | 1 cut(s) | 298 |
| ApeKI | GCWGC | 6 cut(s) | 72, 578, 590, 593, 974, 1097 |
| ApoI | RAATTY | 1 cut(s) | 242 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 178, 210 |
| AseI | ATTAAT | 1 cut(s) | 618 |
| AspLEI | GCGC | 2 cut(s) | 44, 299 |
| AspS9I | GGNCC | 3 cut(s) | 194, 632, 961 |
| AsuHPI | GGTGA | 3 cut(s) | 461, 638, 1060 |
| AvaII | GGWCC | 3 cut(s) | 194, 632, 961 |
| BanI | GGYRCC | 1 cut(s) | 41 |
| BanII | GRGCYC | 1 cut(s) | 344 |
| BauI | CACGAG | 1 cut(s) | 978 |
| BbsI | GAAGAC | 1 cut(s) | 519 |
| Bbv12I | GWGCWC | 1 cut(s) | 344 |
| BbvI | GCAGC | 6 cut(s) | 84, 565, 577, 605, 986, 1084 |
| BccI | CCATC | 3 cut(s) | 623, 683, 695 |
| BciT130I | CCWGG | 2 cut(s) | 412, 636 |
| BcoDI | GTCTC | 2 cut(s) | 720, 759 |
| BfaI | CTAG | 2 cut(s) | 147, 474 |
| BfmI | CTRYAG | 2 cut(s) | 70, 591 |
| BfoI | RGCGCY | 2 cut(s) | 45, 300 |
| BfuAI | ACCTGC | 1 cut(s) | 614 |
| BglII | AGATCT | 1 cut(s) | 792 |
| BisI | GCNGC | 8 cut(s) | 40, 73, 492, 579, 591, 594, 975, 1098 |
| BlpI | GCTNAGC | 1 cut(s) | 293 |
| BlsI | GCNGC | 8 cut(s) | 41, 74, 493, 580, 592, 595, 976, 1099 |
| Bme1390I | CCNGG | 2 cut(s) | 412, 636 |
| Bme18I | GGWCC | 3 cut(s) | 194, 632, 961 |
| BmgBI | CACGTC | 1 cut(s) | 787 |
| BmgT120I | GGNCC | 3 cut(s) | 194, 632, 961 |
| BmiI | GGNNCC | 1 cut(s) | 43 |
| BmrFI | CCNGG | 2 cut(s) | 412, 636 |
| BmsI | GCATC | 9 cut(s) | 20, 279, 546, 652, 714, 908, 1008, 1051, 1072 |
| BpiI | GAAGAC | 1 cut(s) | 519 |
| BpmI | CTGGAG | 1 cut(s) | 657 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 293 |
| BpuEI | CTTGAG | 2 cut(s) | 140, 347 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1086 |
| BsaHI | GRCGYC | 2 cut(s) | 42, 666 |
| BsaI | GGTCTC | 2 cut(s) | 720, 759 |
| BsaJI | CCNNGG | 1 cut(s) | 442 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 438, 468 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 411, 498, 741 |
| Bse1I | ACTGG | 1 cut(s) | 197 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1086 |
| BseBI | CCWGG | 2 cut(s) | 412, 636 |
| BseDI | CCNNGG | 1 cut(s) | 442 |
| BseGI | GGATG | 6 cut(s) | 643, 675, 835, 899, 1042, 1066 |
| BseJI | GATNNNNATC | 1 cut(s) | 1086 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 411, 498, 741 |
| BseMII | CTCAG | 4 cut(s) | 60, 69, 456, 665 |
| BseNI | ACTGG | 1 cut(s) | 197 |
| BseXI | GCAGC | 6 cut(s) | 84, 565, 577, 605, 986, 1084 |
| BseYI | CCCAGC | 2 cut(s) | 98, 221 |
| Bsh1236I | CGCG | 2 cut(s) | 318, 494 |
| BshNI | GGYRCC | 1 cut(s) | 41 |
| BsiHKAI | GWGCWC | 1 cut(s) | 344 |
| BslFI | GGGAC | 1 cut(s) | 238 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 411, 498, 741 |
| BsmAI | GTCTC | 2 cut(s) | 720, 759 |
| BsmFI | GGGAC | 1 cut(s) | 238 |
| Bso31I | GGTCTC | 2 cut(s) | 720, 759 |
| Bsp1286I | GDGCHC | 1 cut(s) | 344 |
| Bsp143I | GATC | 4 cut(s) | 151, 792, 1003, 1087 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 293 |
| BspACI | CCGC | 6 cut(s) | 39, 492, 573, 751, 858, 1071 |
| BspCNI | CTCAG | 4 cut(s) | 59, 70, 457, 664 |
| BspFNI | CGCG | 2 cut(s) | 318, 494 |
| BspLI | GGNNCC | 1 cut(s) | 43 |
| BspMAI | CTGCAG | 2 cut(s) | 74, 595 |
| BspMI | ACCTGC | 1 cut(s) | 614 |
| BspPI | GGATC | 3 cut(s) | 159, 1011, 1082 |
| BspQI | GCTCTTC | 2 cut(s) | 349, 1149 |
| BspT107I | GGYRCC | 1 cut(s) | 41 |
| BspTNI | GGTCTC | 2 cut(s) | 720, 759 |
| BsrI | ACTGG | 1 cut(s) | 197 |
| BssECI | CCNNGG | 1 cut(s) | 442 |
| BssMI | GATC | 4 cut(s) | 151, 792, 1003, 1087 |
| BssNI | GRCGYC | 2 cut(s) | 42, 666 |
| BssSI | CACGAG | 1 cut(s) | 978 |
| BssT1I | CCWWGG | 1 cut(s) | 442 |
| Bst2BI | CACGAG | 1 cut(s) | 978 |
| Bst2UI | CCWGG | 2 cut(s) | 412, 636 |
| Bst4CI | ACNGT | 4 cut(s) | 276, 529, 748, 1124 |
| Bst6I | CTCTTC | 2 cut(s) | 349, 1149 |
| BstACI | GRCGYC | 2 cut(s) | 42, 666 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 599 |
| BstC8I | GCNNGC | 4 cut(s) | 70, 219, 316, 771 |
| BstDEI | CTNAG | 7 cut(s) | 46, 78, 251, 293, 465, 651, 718 |
| BstF5I | GGATG | 6 cut(s) | 643, 675, 835, 899, 1042, 1066 |
| BstFNI | CGCG | 2 cut(s) | 318, 494 |
| BstH2I | RGCGCY | 2 cut(s) | 45, 300 |
| BstHHI | GCGC | 2 cut(s) | 44, 299 |
| BstKTI | GATC | 4 cut(s) | 154, 795, 1006, 1090 |
| BstMAI | GTCTC | 2 cut(s) | 720, 759 |
| BstMBI | GATC | 4 cut(s) | 151, 792, 1003, 1087 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 218, 587, 599 |
| BstNI | CCWGG | 2 cut(s) | 412, 636 |
| BstSCI | CCNGG | 2 cut(s) | 410, 634 |
| BstSFI | CTRYAG | 2 cut(s) | 70, 591 |
| BstUI | CGCG | 2 cut(s) | 318, 494 |
| BstV1I | GCAGC | 6 cut(s) | 84, 565, 577, 605, 986, 1084 |
| BstV2I | GAAGAC | 1 cut(s) | 519 |
| BstX2I | RGATCY | 3 cut(s) | 151, 792, 1003 |
| BstYI | RGATCY | 3 cut(s) | 151, 792, 1003 |
| BtrI | CACGTC | 1 cut(s) | 787 |
| BtsCI | GGATG | 6 cut(s) | 643, 675, 835, 899, 1042, 1066 |
| BtsIMutI | CAGTG | 2 cut(s) | 534, 715 |
| BveI | ACCTGC | 1 cut(s) | 614 |
| Cac8I | GCNNGC | 4 cut(s) | 70, 219, 316, 771 |
| CaiI | CAGNNNCTG | 1 cut(s) | 599 |
| CfoI | GCGC | 2 cut(s) | 44, 299 |
| Cfr13I | GGNCC | 3 cut(s) | 194, 632, 961 |
| Csp6I | GTAC | 1 cut(s) | 408 |
| CviAII | CATG | 2 cut(s) | 209, 1039 |
| CviQI | GTAC | 1 cut(s) | 408 |
| DdeI | CTNAG | 7 cut(s) | 46, 78, 251, 293, 465, 651, 718 |
| DinI | GGCGCC | 1 cut(s) | 43 |
| DpnI | GATC | 4 cut(s) | 153, 794, 1005, 1089 |
| DpnII | GATC | 4 cut(s) | 151, 792, 1003, 1087 |
| DraIII | CACNNNGTG | 1 cut(s) | 353 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 751 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 751 |
| Eam1104I | CTCTTC | 2 cut(s) | 349, 1149 |
| EarI | CTCTTC | 2 cut(s) | 349, 1149 |
| Ecl136II | GAGCTC | 1 cut(s) | 342 |
| Eco130I | CCWWGG | 1 cut(s) | 442 |
| Eco24I | GRGCYC | 1 cut(s) | 344 |
| Eco31I | GGTCTC | 2 cut(s) | 720, 759 |
| Eco47I | GGWCC | 3 cut(s) | 194, 632, 961 |
| Eco47III | AGCGCT | 1 cut(s) | 298 |
| Eco53kI | GAGCTC | 1 cut(s) | 342 |
| Eco57I | CTGAAG | 2 cut(s) | 9, 1090 |
| EcoICRI | GAGCTC | 1 cut(s) | 342 |
| EcoRII | CCWGG | 2 cut(s) | 410, 634 |
| EcoT14I | CCWWGG | 1 cut(s) | 442 |
| EcoT22I | ATGCAT | 1 cut(s) | 1044 |
| EcoT38I | GRGCYC | 1 cut(s) | 344 |
| EgeI | GGCGCC | 1 cut(s) | 43 |
| EheI | GGCGCC | 1 cut(s) | 43 |
| ErhI | CCWWGG | 1 cut(s) | 442 |
| FaeI | CATG | 2 cut(s) | 212, 1042 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 782, 814 |
| FaqI | GGGAC | 1 cut(s) | 238 |
| FatI | CATG | 2 cut(s) | 208, 1038 |
| FauI | CCCGC | 1 cut(s) | 851 |
| FblI | GTMKAC | 1 cut(s) | 996 |
| Fnu4HI | GCNGC | 8 cut(s) | 40, 73, 492, 579, 591, 594, 975, 1098 |
| FokI | GGATG | 6 cut(s) | 630, 662, 842, 886, 1029, 1073 |
| FriOI | GRGCYC | 1 cut(s) | 344 |
| Fsp4HI | GCNGC | 8 cut(s) | 40, 73, 492, 579, 591, 594, 975, 1098 |
| FspBI | CTAG | 2 cut(s) | 147, 474 |
| GlaI | GCGC | 2 cut(s) | 43, 298 |
| GluI | GCNGC | 8 cut(s) | 40, 73, 492, 579, 591, 594, 975, 1098 |
| GsaI | CCCAGC | 2 cut(s) | 102, 225 |
| GsuI | CTGGAG | 1 cut(s) | 657 |
| HaeII | RGCGCY | 2 cut(s) | 45, 300 |
| HhaI | GCGC | 2 cut(s) | 44, 299 |
| Hin1I | GRCGYC | 2 cut(s) | 42, 666 |
| Hin1II | CATG | 2 cut(s) | 212, 1042 |
| Hin6I | GCGC | 2 cut(s) | 42, 297 |
| HinP1I | GCGC | 2 cut(s) | 42, 297 |
| HinfI | GANTC | 4 cut(s) | 175, 181, 425, 930 |
| HphI | GGTGA | 3 cut(s) | 461, 638, 1060 |
| Hpy166II | GTNNAC | 1 cut(s) | 997 |
| Hpy188I | TCNGA | 5 cut(s) | 79, 180, 544, 883, 1109 |
| Hpy188III | TCNNGA | 1 cut(s) | 157 |
| Hpy8I | GTNNAC | 1 cut(s) | 997 |
| HpyAV | CCTTC | 4 cut(s) | 260, 408, 735, 820 |
| HpyCH4III | ACNGT | 4 cut(s) | 276, 529, 748, 1124 |
| HpyCH4IV | ACGT | 2 cut(s) | 666, 786 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 218, 587, 599 |
| HpyF3I | CTNAG | 7 cut(s) | 46, 78, 251, 293, 465, 651, 718 |
| HpySE526I | ACGT | 2 cut(s) | 666, 786 |
| Hsp92I | GRCGYC | 2 cut(s) | 42, 666 |
| Hsp92II | CATG | 2 cut(s) | 212, 1042 |
| HspAI | GCGC | 2 cut(s) | 42, 297 |
| KasI | GGCGCC | 1 cut(s) | 41 |
| Kzo9I | GATC | 4 cut(s) | 151, 792, 1003, 1087 |
| LguI | GCTCTTC | 2 cut(s) | 349, 1149 |
| Lsp1109I | GCAGC | 6 cut(s) | 84, 565, 577, 605, 986, 1084 |
| LweI | GCATC | 9 cut(s) | 20, 279, 546, 652, 714, 908, 1008, 1051, 1072 |
| MaeI | CTAG | 2 cut(s) | 147, 474 |
| MaeII | ACGT | 2 cut(s) | 666, 786 |
| MalI | GATC | 4 cut(s) | 153, 794, 1005, 1089 |
| MboI | GATC | 4 cut(s) | 151, 792, 1003, 1087 |
| MboII | GAAGA | 7 cut(s) | 86, 250, 336, 524, 802, 884, 1136 |
| MflI | RGATCY | 3 cut(s) | 151, 792, 1003 |
| MhlI | GDGCHC | 1 cut(s) | 344 |
| MluCI | AATT | 5 cut(s) | 242, 549, 687, 695, 813 |
| Mly113I | GGCGCC | 1 cut(s) | 42 |
| MlyI | GAGTC | 1 cut(s) | 175 |
| MmeI | TCCRAC | 1 cut(s) | 703 |
| MnlI | CCTC | 8 cut(s) | 55, 154, 222, 371, 395, 440, 526, 936 |
| Mph1103I | ATGCAT | 1 cut(s) | 1044 |
| MseI | TTAA | 4 cut(s) | 374, 458, 618, 887 |
| MslI | CAYNNNNRTG | 2 cut(s) | 904, 1136 |
| MspR9I | CCNGG | 2 cut(s) | 412, 636 |
| MvaI | CCWGG | 2 cut(s) | 412, 636 |
| MvnI | CGCG | 2 cut(s) | 318, 494 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 218, 587, 599 |
| NarI | GGCGCC | 1 cut(s) | 42 |
| NdeII | GATC | 4 cut(s) | 151, 792, 1003, 1087 |
| NlaIII | CATG | 2 cut(s) | 212, 1042 |
| NlaIV | GGNNCC | 1 cut(s) | 43 |
| NsiI | ATGCAT | 1 cut(s) | 1044 |
| PaqCI | CACCTGC | 1 cut(s) | 614 |
| PciSI | GCTCTTC | 2 cut(s) | 349, 1149 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 491 |
| PfeI | GAWTC | 3 cut(s) | 175, 425, 930 |
| PfoI | TCCNGGA | 1 cut(s) | 634 |
| PkrI | GCNGC | 8 cut(s) | 41, 74, 493, 580, 592, 595, 976, 1099 |
| PleI | GAGTC | 1 cut(s) | 175 |
| PluTI | GGCGCC | 1 cut(s) | 45 |
| PpsI | GAGTC | 1 cut(s) | 175 |
| PshBI | ATTAAT | 1 cut(s) | 618 |
| Psp124BI | GAGCTC | 1 cut(s) | 344 |
| Psp6I | CCWGG | 2 cut(s) | 410, 634 |
| PspFI | CCCAGC | 2 cut(s) | 98, 221 |
| PspGI | CCWGG | 2 cut(s) | 410, 634 |
| PspN4I | GGNNCC | 1 cut(s) | 43 |
| PspPI | GGNCC | 3 cut(s) | 194, 632, 961 |
| PstI | CTGCAG | 2 cut(s) | 74, 595 |
| PstNI | CAGNNNCTG | 1 cut(s) | 599 |
| PsuI | RGATCY | 3 cut(s) | 151, 792, 1003 |
| RsaI | GTAC | 1 cut(s) | 409 |
| RsaNI | GTAC | 1 cut(s) | 408 |
| RseI | CAYNNNNRTG | 2 cut(s) | 904, 1136 |
| SacI | GAGCTC | 1 cut(s) | 344 |
| SapI | GCTCTTC | 2 cut(s) | 349, 1149 |
| SaqAI | TTAA | 4 cut(s) | 374, 458, 618, 887 |
| SatI | GCNGC | 8 cut(s) | 40, 73, 492, 579, 591, 594, 975, 1098 |
| Sau3AI | GATC | 4 cut(s) | 151, 792, 1003, 1087 |
| Sau96I | GGNCC | 3 cut(s) | 194, 632, 961 |
| SchI | GAGTC | 1 cut(s) | 175 |
| ScrFI | CCNGG | 2 cut(s) | 412, 636 |
| SduI | GDGCHC | 1 cut(s) | 344 |
| SfaNI | GCATC | 9 cut(s) | 20, 279, 546, 652, 714, 908, 1008, 1051, 1072 |
| SfcI | CTRYAG | 2 cut(s) | 70, 591 |
| SfoI | GGCGCC | 1 cut(s) | 43 |
| SinI | GGWCC | 3 cut(s) | 194, 632, 961 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 904, 1136 |
| SmlI | CTYRAG | 2 cut(s) | 155, 362 |
| SmoI | CTYRAG | 2 cut(s) | 155, 362 |
| Sse9I | AATT | 5 cut(s) | 242, 549, 687, 695, 813 |
| SsiI | CCGC | 6 cut(s) | 39, 492, 573, 751, 858, 1071 |
| SspDI | GGCGCC | 1 cut(s) | 41 |
| SspMI | CTAG | 2 cut(s) | 147, 474 |
| SstI | GAGCTC | 1 cut(s) | 344 |
| StyD4I | CCNGG | 2 cut(s) | 410, 634 |
| StyI | CCWWGG | 1 cut(s) | 442 |
| TaaI | ACNGT | 4 cut(s) | 276, 529, 748, 1124 |
| TaiI | ACGT | 2 cut(s) | 669, 789 |
| TaqI | TCGA | 2 cut(s) | 184, 306 |
| TasI | AATT | 5 cut(s) | 242, 549, 687, 695, 813 |
| TauI | GCSGC | 2 cut(s) | 42, 494 |
| TfiI | GAWTC | 3 cut(s) | 175, 425, 930 |
| Tru1I | TTAA | 4 cut(s) | 374, 458, 618, 887 |
| Tru9I | TTAA | 4 cut(s) | 374, 458, 618, 887 |
| TscAI | CASTG | 2 cut(s) | 534, 715 |
| TseI | GCWGC | 6 cut(s) | 72, 578, 590, 593, 974, 1097 |
| TspDTI | ATGAA | 5 cut(s) | 408, 449, 839, 1077, 1120 |
| TspGWI | ACGGA | 1 cut(s) | 753 |
| TspRI | CASTG | 2 cut(s) | 534, 715 |
| VpaK11BI | GGWCC | 3 cut(s) | 194, 632, 961 |
| VspI | ATTAAT | 1 cut(s) | 618 |
| XapI | RAATTY | 1 cut(s) | 242 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 686 |
| XmiI | GTMKAC | 1 cut(s) | 996 |
| XspI | CTAG | 2 cut(s) | 147, 474 |
| ZraI | GACGTC | 1 cut(s) | 667 |
| Zsp2I | ATGCAT | 1 cut(s) | 1044 |