Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0003920

Physical Location & Seq

Genomic Coordinates Forward (+)

5711665 .. 5713934

Gene Structure 2270 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0038000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1182 bp

ATGAATGGAATGACTCCCCCAAAATCAAACCACATGCGTGGTGACGATCTGCTACGGAGAGTGCTGGATCGGAATTGGGTGAGTGGAAAAAGAGGACCCCGGTTGGAGTTCCAGGAAAAAGAAACTGGGCCCAAATACAGTGTCCCTCGATCAAATTGGTCAGTCAGCCCACCTGCAGAAAAGACGGTGACCATGGAAAAGAAGGTGATCTTGGAAACCAAGGTTATGAAGGGAAACAAAAAGGAGGGAAAGAAACGCCAGCGTGACGTACCTCCAAGGAAACTCGGCCGTGCACGTTTTCGGGAAGGGGAGGATGTTAAGTTATTTGACTATATCTTTATGGAAAGGCCCCCAACAGAGCCCGATTCCAGTGAGGTCGTTTGTATGGCTGATGGTATGCATGTTACAAGAACAGACATGCAATGTCTTGGACCAAGGGGATACGTTGATGGCCAGGTGATTGATACGTTCGCAAACTACGTCAACGGCTACGGACTTAATAACTGGTATTTGACAAGCTACTTTGGGCGCAGCTCCACTTCAAAAAAGGACGTGTCAATGAGTAATGAAGCATGGATTGGCCACACCATAACAATAGGTGCAATGTGGAGATTTAGGGGCCGGATTGGAAATTGTGACAAGATATTCATTCCAATGCATGAGGAGGGGGAAAATGGTAGAGCTGGCCATTGGTATTTATTAGTGGTTCATGTCAGGGACAGATATGCCGAGATACTTGATAGTGCACCTGACCGTAACAAATTCATTTTCCGCCGACGTGATTCACGTGCTGTGCTGAGTTTGTTGTCGTGTTTATTAAAGCGTGCGTCGACAATGGACATGCTGGACTCAATATATGGTGATGACATTGCCGACCAACTCCATCCTGACTTTGCCTGTGGAAATCTTCCATTCACTGTTGGGACGGAGCGGGCAAAGCTTCTGCTGGACTGCTTAAGGCATGACAGGAATGAGATAACAGAGTTGCATGTCAAGGCTCACCAATCCATGCTTCGTTGGACGGGAAAAGGGCCAAAGGCCAGAGTTGGAAGGGGAAAGGGAGGTGCACTGAAGATAACAGAACAACAGACTGAAACAATTATTATATCTGAAGATTCCGAACAGGTAACTGACAAAAATGGCAACAGAAACCCTCCCAGTGCAGCAATGCAAAAGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004070 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006220 GO:0006221 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009165 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009267 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009987 GO:0009991 GO:0016036 GO:0016740 GO:0016741 GO:0016743 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0034641 GO:0034654 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046390 GO:0046483 GO:0050896 GO:0051716 GO:0055086 GO:0071496 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00240 ko00250 ko01100 map00240 map00250 map01100

Pfam Domains

Protein Families

OTCace OTCace_N

Protein Analysis

393

Amino Acids

44.75

Weight (kDa)

9.4

Isoelectric Point (pI)

40.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_C48	PF02902	209 - 277	2e-07	Ulp1 protease family, C-terminal catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003920)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20330 AT3G20330
fragaria_vesca	FvH4_4g09330 FvH4_4g09330 FvH4_4g09330 FvH4_4g09330 FvH4_4g09330 FvH4_4g09330 FvH4_7g16631 FvH4_7g16631
malus_domestica	MD15G1397500.v1.1
prunus_persica	Prupe.4G221200_v2.0.a1
pyrus_communis	pycom15g35730
rosa_chinensis	RchiOBHm_Chr4g0402721 RchiOBHm_Chr6g0264841
rosa_laevigata	RLG00000009051 RLG00000014232
rosa_multiflora	Rmu_sc0000546.1_g000042 Rmu_sc0002451.1_g000002
rosa_roxburghii	Rroxscaffold_175G00432030 Rroxscaffold_5G00347480 Rroxscaffold_7G00203190
rosa_rugosa	Rorug04G0038000 Rorug06G0014400
rosa_samantha	Rh4AG115600 Rh4BG108100 Rh4CG122500 Rh4DG108100 Rh6AG134700 Rh6BG132300 Rh6CG130900 Rh6DG117900
rosa_wichuraiana	Rw4G009240 Rw6G011660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	181
Acc36I	ACCTGC	1 cut(s)	181
AccBSI	CCGCTC	1 cut(s)	931
AccI	GTMKAC	1 cut(s)	830
AciI	CCGC	2 cut(s)	772, 931
AclWI	GGATC	1 cut(s)	75
AcoI	YGGCCR	4 cut(s)	286, 451, 580, 685
AcsI	RAATTY	1 cut(s)	761
AcuI	CTGAAG	2 cut(s)	1091, 1131
AcvI	CACGTG	1 cut(s)	788
AfaI	GTAC	1 cut(s)	270
AflII	CTTAAG	1 cut(s)	955
AflIII	ACRYGT	1 cut(s)	552
AgsI	TTSAA	1 cut(s)	543
AjiI	CACGTC	2 cut(s)	553, 779
AjnI	CCWGG	2 cut(s)	111, 453
AjuI	GAANNNNNNNTTGG	6 cut(s)	194, 226, 561, 593, 996, 1028
AleI	CACNNNNGTG	1 cut(s)	36
AluBI	AGCT	4 cut(s)	519, 534, 683, 940
AluI	AGCT	4 cut(s)	519, 534, 683, 940
Alw21I	GWGCWC	3 cut(s)	295, 748, 1069
Alw44I	GTGCAC	3 cut(s)	291, 744, 1065
AlwI	GGATC	1 cut(s)	75
AoxI	GGCC	9 cut(s)	128, 286, 347, 451, 580, 619, 685, 1031, 1038
ApaI	GGGCCC	1 cut(s)	132
ApaLI	GTGCAC	3 cut(s)	291, 744, 1065
ApeKI	GCWGC	2 cut(s)	531, 1163
ApoI	RAATTY	1 cut(s)	761
ArsI	GACNNNNNNTTYG	2 cut(s)	126, 158
AspLEI	GCGC	1 cut(s)	531
AspS9I	GGNCC	7 cut(s)	95, 128, 129, 348, 431, 619, 1031
AsuC2I	CCSGG	1 cut(s)	100
AsuHPI	GGTGA	7 cut(s)	53, 91, 199, 217, 469, 872, 992
AvaII	GGWCC	2 cut(s)	95, 431
BaeGI	GKGCMC	4 cut(s)	132, 295, 748, 1069
BalI	TGGCCA	3 cut(s)	453, 582, 687
BanII	GRGCYC	2 cut(s)	132, 363
BbrPI	CACGTG	1 cut(s)	788
Bbv12I	GWGCWC	3 cut(s)	295, 748, 1069
BbvI	GCAGC	2 cut(s)	543, 1175
BccI	CCATC	3 cut(s)	386, 443, 891
BceAI	ACGGC	2 cut(s)	273, 502
BciT130I	CCWGG	2 cut(s)	113, 455
BciVI	GTATCC	1 cut(s)	434
BcnI	CCSGG	1 cut(s)	100
BfmI	CTRYAG	1 cut(s)	174
BfrI	CTTAAG	1 cut(s)	955
BfuAI	ACCTGC	1 cut(s)	181
BfuI	GTATCC	1 cut(s)	434
BisI	GCNGC	2 cut(s)	532, 1164
BlsI	GCNGC	2 cut(s)	533, 1165
Bme1390I	CCNGG	3 cut(s)	100, 113, 455
Bme18I	GGWCC	2 cut(s)	95, 431
BmgBI	CACGTC	2 cut(s)	553, 779
BmgT120I	GGNCC	7 cut(s)	95, 128, 129, 348, 431, 619, 1031
BmiI	GGNNCC	4 cut(s)	97, 130, 350, 620
BmrFI	CCNGG	3 cut(s)	100, 113, 455
BmrI	ACTGGG	2 cut(s)	135, 1152
BmuI	ACTGGG	2 cut(s)	135, 1152
BpuMI	CCSGG	1 cut(s)	100
BsaAI	YACGTR	1 cut(s)	788
BsaJI	CCNNGG	5 cut(s)	98, 192, 219, 275, 434
Bse1I	ACTGG	4 cut(s)	130, 369, 509, 1158
Bse3DI	GCAATG	4 cut(s)	428, 609, 867, 1173
BseBI	CCWGG	2 cut(s)	113, 455
BseDI	CCNNGG	5 cut(s)	98, 192, 219, 275, 434
BseGI	GGATG	2 cut(s)	319, 883
BseMI	GCAATG	4 cut(s)	428, 609, 867, 1173
BseMII	CTCAG	1 cut(s)	788
BseNI	ACTGG	4 cut(s)	130, 369, 509, 1158
BseRI	GAGGAG	1 cut(s)	677
BseSI	GKGCMC	4 cut(s)	132, 295, 748, 1069
BseX3I	CGGCCG	1 cut(s)	286
BseXI	GCAGC	2 cut(s)	543, 1175
BsgI	GTGCAG	1 cut(s)	1182
Bsh1285I	CGRYCG	1 cut(s)	289
BshFI	GGCC	9 cut(s)	130, 288, 349, 453, 582, 621, 687, 1033, 1040
BsiEI	CGRYCG	1 cut(s)	289
BsiHKAI	GWGCWC	3 cut(s)	295, 748, 1069
BsiSI	CCGG	2 cut(s)	100, 622
BslFI	GGGAC	3 cut(s)	128, 731, 937
BsmFI	GGGAC	3 cut(s)	128, 731, 937
BsnI	GGCC	9 cut(s)	130, 288, 349, 453, 582, 621, 687, 1033, 1040
Bsp120I	GGGCCC	1 cut(s)	128
Bsp1286I	GDGCHC	5 cut(s)	132, 295, 363, 748, 1069
Bsp143I	GATC	4 cut(s)	46, 67, 149, 207
Bsp19I	CCATGG	1 cut(s)	192
BspACI	CCGC	2 cut(s)	772, 931
BspANI	GGCC	9 cut(s)	130, 288, 349, 453, 582, 621, 687, 1033, 1040
BspCNI	CTCAG	1 cut(s)	789
BspLI	GGNNCC	4 cut(s)	97, 130, 350, 620
BspMAI	CTGCAG	1 cut(s)	178
BspMI	ACCTGC	1 cut(s)	181
BspPI	GGATC	1 cut(s)	75
BspTI	CTTAAG	1 cut(s)	955
BsrBI	CCGCTC	1 cut(s)	931
BsrDI	GCAATG	4 cut(s)	428, 609, 867, 1173
BsrI	ACTGG	4 cut(s)	130, 369, 509, 1158
BssECI	CCNNGG	5 cut(s)	98, 192, 219, 275, 434
BssMI	GATC	4 cut(s)	46, 67, 149, 207
BssT1I	CCWWGG	4 cut(s)	192, 219, 275, 434
Bst2UI	CCWGG	2 cut(s)	113, 455
Bst4CI	ACNGT	4 cut(s)	140, 187, 755, 919
BstAFI	CTTAAG	1 cut(s)	955
BstBAI	YACGTR	1 cut(s)	788
BstC8I	GCNNGC	4 cut(s)	260, 685, 825, 933
BstDEI	CTNAG	1 cut(s)	797
BstDSI	CCRYGG	1 cut(s)	192
BstEII	GGTNACC	1 cut(s)	187
BstF5I	GGATG	2 cut(s)	319, 883
BstHHI	GCGC	1 cut(s)	531
BstKTI	GATC	4 cut(s)	49, 70, 152, 210
BstMBI	GATC	4 cut(s)	46, 67, 149, 207
BstMCI	CGRYCG	1 cut(s)	289
BstMWI	GCNNNNNNNGC	1 cut(s)	937
BstNI	CCWGG	2 cut(s)	113, 455
BstNSI	RCATGY	5 cut(s)	37, 404, 421, 844, 992
BstPI	GGTNACC	1 cut(s)	187
BstSCI	CCNGG	3 cut(s)	98, 111, 453
BstSFI	CTRYAG	1 cut(s)	174
BstSLI	GKGCMC	4 cut(s)	132, 295, 748, 1069
BstV1I	GCAGC	2 cut(s)	543, 1175
BstXI	CCANNNNNNTGG	1 cut(s)	38
BstZI	CGGCCG	1 cut(s)	286
BsuI	GTATCC	1 cut(s)	434
BsuRI	GGCC	9 cut(s)	130, 288, 349, 453, 582, 621, 687, 1033, 1040
BtgI	CCRYGG	1 cut(s)	192
BtrI	CACGTC	2 cut(s)	553, 779
BtsCI	GGATG	2 cut(s)	319, 883
BtsIMutI	CAGTG	5 cut(s)	145, 376, 915, 1067, 1165
BveI	ACCTGC	1 cut(s)	181
Cac8I	GCNNGC	4 cut(s)	260, 685, 825, 933
CfoI	GCGC	1 cut(s)	531
Cfr13I	GGNCC	7 cut(s)	95, 128, 129, 348, 431, 619, 1031
CseI	GACGC	1 cut(s)	816
Csp6I	GTAC	1 cut(s)	269
CviQI	GTAC	1 cut(s)	269
DdeI	CTNAG	1 cut(s)	797
DpnI	GATC	4 cut(s)	48, 69, 151, 209
DpnII	GATC	4 cut(s)	46, 67, 149, 207
EaeI	YGGCCR	4 cut(s)	286, 451, 580, 685
EagI	CGGCCG	1 cut(s)	286
EciI	GGCGGA	1 cut(s)	761
EclXI	CGGCCG	1 cut(s)	286
Eco130I	CCWWGG	4 cut(s)	192, 219, 275, 434
Eco24I	GRGCYC	2 cut(s)	132, 363
Eco47I	GGWCC	2 cut(s)	95, 431
Eco52I	CGGCCG	1 cut(s)	286
Eco57I	CTGAAG	2 cut(s)	1091, 1131
Eco72I	CACGTG	1 cut(s)	788
Eco91I	GGTNACC	1 cut(s)	187
EcoO109I	RGGNCCY	2 cut(s)	95, 348
EcoO65I	GGTNACC	1 cut(s)	187
EcoRII	CCWGG	2 cut(s)	111, 453
EcoT14I	CCWWGG	4 cut(s)	192, 219, 275, 434
EcoT22I	ATGCAT	2 cut(s)	402, 660
EcoT38I	GRGCYC	2 cut(s)	132, 363
ErhI	CCWWGG	4 cut(s)	192, 219, 275, 434
FalI	AAGNNNNNCTT	2 cut(s)	194, 226
FaqI	GGGAC	3 cut(s)	128, 731, 937
FauI	CCCGC	1 cut(s)	924
FblI	GTMKAC	1 cut(s)	830
Fnu4HI	GCNGC	2 cut(s)	532, 1164
FokI	GGATG	2 cut(s)	326, 870
FriOI	GRGCYC	2 cut(s)	132, 363
Fsp4HI	GCNGC	2 cut(s)	532, 1164
GlaI	GCGC	1 cut(s)	530
GluI	GCNGC	2 cut(s)	532, 1164
HaeIII	GGCC	9 cut(s)	130, 288, 349, 453, 582, 621, 687, 1033, 1040
HapII	CCGG	2 cut(s)	100, 622
HgaI	GACGC	1 cut(s)	816
HhaI	GCGC	1 cut(s)	531
Hin6I	GCGC	1 cut(s)	529
HinP1I	GCGC	1 cut(s)	529
HincII	GTYRAC	2 cut(s)	484, 831
HindII	GTYRAC	2 cut(s)	484, 831
HindIII	AAGCTT	1 cut(s)	938
HinfI	GANTC	5 cut(s)	13, 365, 782, 848, 1115
HpaII	CCGG	2 cut(s)	100, 622
HphI	GGTGA	7 cut(s)	53, 91, 199, 217, 469, 872, 992
Hpy166II	GTNNAC	5 cut(s)	293, 484, 746, 831, 1067
Hpy188I	TCNGA	3 cut(s)	72, 1111, 1120
Hpy188III	TCNNGA	2 cut(s)	302, 887
Hpy8I	GTNNAC	5 cut(s)	293, 484, 746, 831, 1067
Hpy99I	CGWCG	2 cut(s)	780, 832
HpyAV	CCTTC	4 cut(s)	196, 223, 299, 1044
HpyCH4III	ACNGT	4 cut(s)	140, 187, 755, 919
HpyCH4IV	ACGT	8 cut(s)	267, 295, 444, 467, 480, 552, 778, 787
HpyF10VI	GCNNNNNNNGC	1 cut(s)	937
HpyF3I	CTNAG	1 cut(s)	797
HpySE526I	ACGT	8 cut(s)	267, 295, 444, 467, 480, 552, 778, 787
HspAI	GCGC	1 cut(s)	529
Kzo9I	GATC	4 cut(s)	46, 67, 149, 207
LmnI	GCTCC	2 cut(s)	539, 928
Lsp1109I	GCAGC	2 cut(s)	543, 1175
MaeII	ACGT	8 cut(s)	267, 295, 444, 467, 480, 552, 778, 787
MaeIII	GTNAC	7 cut(s)	41, 187, 263, 403, 635, 755, 1126
MalI	GATC	4 cut(s)	48, 69, 151, 209
MbiI	CCGCTC	1 cut(s)	931
MboI	GATC	4 cut(s)	46, 67, 149, 207
MboII	GAAGA	3 cut(s)	899, 1084, 1124
MhlI	GDGCHC	5 cut(s)	132, 295, 363, 748, 1069
MlsI	TGGCCA	3 cut(s)	453, 582, 687
MluCI	AATT	5 cut(s)	73, 154, 631, 761, 1098
MluNI	TGGCCA	3 cut(s)	453, 582, 687
MlyI	GAGTC	2 cut(s)	7, 842
MmeI	TCCRAC	3 cut(s)	84, 998, 1027
Mox20I	TGGCCA	3 cut(s)	453, 582, 687
Mph1103I	ATGCAT	2 cut(s)	402, 660
MscI	TGGCCA	3 cut(s)	453, 582, 687
MseI	TTAA	4 cut(s)	318, 498, 818, 956
MslI	CAYNNNNRTG	2 cut(s)	36, 653
Msp20I	TGGCCA	3 cut(s)	453, 582, 687
MspCI	CTTAAG	1 cut(s)	955
MspI	CCGG	2 cut(s)	100, 622
MspR9I	CCNGG	3 cut(s)	100, 113, 455
MvaI	CCWGG	2 cut(s)	113, 455
MwoI	GCNNNNNNNGC	1 cut(s)	937
NciI	CCSGG	1 cut(s)	100
NcoI	CCATGG	1 cut(s)	192
NdeII	GATC	4 cut(s)	46, 67, 149, 207
NlaIV	GGNNCC	4 cut(s)	97, 130, 350, 620
NmeAIII	GCCGAG	2 cut(s)	264, 754
NmuCI	GTSAC	4 cut(s)	41, 187, 263, 635
NsiI	ATGCAT	2 cut(s)	402, 660
NspI	RCATGY	5 cut(s)	37, 404, 421, 844, 992
OliI	CACNNNNGTG	1 cut(s)	36
PaqCI	CACCTGC	1 cut(s)	181
PcsI	WCGNNNNNNNCGW	2 cut(s)	477, 784
PfeI	GAWTC	3 cut(s)	365, 782, 1115
PfoI	TCCNGGA	1 cut(s)	111
PkrI	GCNGC	2 cut(s)	533, 1165
PleI	GAGTC	2 cut(s)	7, 842
PmaCI	CACGTG	1 cut(s)	788
PmlI	CACGTG	1 cut(s)	788
PpsI	GAGTC	2 cut(s)	7, 842
Ppu21I	YACGTR	1 cut(s)	788
PpuMI	RGGWCCY	1 cut(s)	95
Psp5II	RGGWCCY	1 cut(s)	95
Psp6I	CCWGG	2 cut(s)	111, 453
PspCI	CACGTG	1 cut(s)	788
PspEI	GGTNACC	1 cut(s)	187
PspGI	CCWGG	2 cut(s)	111, 453
PspN4I	GGNNCC	4 cut(s)	97, 130, 350, 620
PspOMI	GGGCCC	1 cut(s)	128
PspPI	GGNCC	7 cut(s)	95, 128, 129, 348, 431, 619, 1031
PspPPI	RGGWCCY	1 cut(s)	95
PstI	CTGCAG	1 cut(s)	178
RsaI	GTAC	1 cut(s)	270
RsaNI	GTAC	1 cut(s)	269
RseI	CAYNNNNRTG	2 cut(s)	36, 653
SalI	GTCGAC	1 cut(s)	829
SaqAI	TTAA	4 cut(s)	318, 498, 818, 956
SatI	GCNGC	2 cut(s)	532, 1164
Sau3AI	GATC	4 cut(s)	46, 67, 149, 207
Sau96I	GGNCC	7 cut(s)	95, 128, 129, 348, 431, 619, 1031
SchI	GAGTC	2 cut(s)	7, 842
ScrFI	CCNGG	3 cut(s)	100, 113, 455
SduI	GDGCHC	5 cut(s)	132, 295, 363, 748, 1069
SfcI	CTRYAG	1 cut(s)	174
SinI	GGWCC	2 cut(s)	95, 431
SmiMI	CAYNNNNRTG	2 cut(s)	36, 653
SmlI	CTYRAG	1 cut(s)	955
SmoI	CTYRAG	1 cut(s)	955
Sse9I	AATT	5 cut(s)	73, 154, 631, 761, 1098
SsiI	CCGC	2 cut(s)	772, 931
StyD4I	CCNGG	3 cut(s)	98, 111, 453
StyI	CCWWGG	4 cut(s)	192, 219, 275, 434
TaaI	ACNGT	4 cut(s)	140, 187, 755, 919
TaiI	ACGT	8 cut(s)	270, 298, 447, 470, 483, 555, 781, 790
TaqI	TCGA	2 cut(s)	148, 830
TasI	AATT	5 cut(s)	73, 154, 631, 761, 1098
TfiI	GAWTC	3 cut(s)	365, 782, 1115
Tru1I	TTAA	4 cut(s)	318, 498, 818, 956
Tru9I	TTAA	4 cut(s)	318, 498, 818, 956
TscAI	CASTG	5 cut(s)	145, 376, 922, 1074, 1165
TseFI	GTSAC	4 cut(s)	41, 187, 263, 635
TseI	GCWGC	2 cut(s)	531, 1163
Tsp45I	GTSAC	4 cut(s)	41, 187, 263, 635
TspDTI	ATGAA	6 cut(s)	17, 242, 582, 637, 698, 754
TspGWI	ACGGA	3 cut(s)	70, 507, 941
TspRI	CASTG	5 cut(s)	145, 376, 922, 1074, 1165
Vha464I	CTTAAG	1 cut(s)	955
VneI	GTGCAC	3 cut(s)	291, 744, 1065
VpaK11BI	GGWCC	2 cut(s)	95, 431
XapI	RAATTY	1 cut(s)	761
XceI	RCATGY	5 cut(s)	37, 404, 421, 844, 992
XmiI	GTMKAC	1 cut(s)	830
Zsp2I	ATGCAT	2 cut(s)	402, 660

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.