AT3G21290

Occludin homology domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0005746
Physical Location & Seq
Forward (+)
7482106 .. 7488935
6830 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G21290.2

Sequence Viewer

Length: 3579 bp
ATGTTCAAAGGATCGTCGAAACGTGGCGGTAGAGGAGGAAGTGGTGGTGGGGGCAGTGGACCTTCCCGTAACCGTAATTCATTCCCTCCTCCTACAAACCGACATCCTTCTCCCATCGGGAGGATGTCTTCTGGTGGTGGTGGTGGTGGCTCCGCCGCTCCACGCCAGCGGAGTAATTCTACTAGCGTTAAGGCGGCTGCGTCGACTACGGTGTCGTCGCGGACGGTTGAGGAAACGTTTAATCTTGTTCCGAGGGAGAGTTCTTCGGCTTTTGGAATGATTATAAGGTTATCTCCTGATTTGGTGGATGAGATCAAGCGTGTGGAGGCACAAGGTGGAGCTGCCAAGATCAAGTTCGATGCGTTTCCTAACAATAGCACTGAGAATATAATTAATGTTGGTGGAAAGGAGTTCAAATTTACTTGGTCTGGGGAGAAAGGTGAGTTATGTGATATATATGAAGAACATCAAAGTGGTGAAGATGGAAATGGTTTGCTGATTGAGGCTGGATGTGCTTGGCGAAAATTGAACGTCCTACGAACTCTAGATGAGTCAACCACAAGCCATATGAAGATGCGCTCAGTTGAAGCTGAACAGAGAACCAAATCACGCAAGGCCATTGTTTTAGATCCTGGGAATCCATCAGTAACGAAGCAGTTAGCTCATGCTGAAGGAAGTCCATGGAGAATGTCAAATAAACAGAAGAAGGAACCTCCACCTAAGAAGCGGAAAGTTGATCCACCACCAGTTCCAGTCGGAGGTCCAAAGCCTTCTTTCAGACCAGGGGCTTCTACCCCTACTATGAAAAATAGGCTATCAGCTTCACCCGGACCGTCTCCTAGTAATCAATACAATACCCCTCCATATGGGATTGGGAATATGGCTAAAACTCATGCAGCTAACGAGAATGTCACACCAGTCCAGACAAAGGGCAGAGTGAACATGATCGAAAAAGAACCATCAGCCTGGAAAAATAATGTATTAAGGGACACATCTGGGCGCGAAGCAATTAATGTTAATAAAGAAATTGACTTGCAGTCACTGCTCGTTGATATCCTAAAAGAGGCTCCAATGAGCTTGAAGGCTTTAGAGAAAGCTGTTGGAGATAAAGTTCCTAATCCCGCAAAGAAGATTGAACCAATTTTGAAAAGGATCGCAAATTTCCAAGCTCCAAGGTATTTCTTAAAACCAGAAGCAGAGTTGGAAAGCTATAAAAAACATTCACCTGATAGCGGAAGTTCACCTGAACACCAACAATTGCTGCCAGTCACTGAGTGCAGTCGCGATCAGTTACCTGTTCCAGGAAGAAATAACACAGAGAAATTTTCTTTGTGCGAGCAGAACGGAGAAGGTTCACTAGACTGTTTACCTGTGCATCTAGTAGAGCAACTGAGTACGCAGGAAAATGTTGACATTGAGCATCATTCACCTGGTATTTTTCATGAGGAAAAACGATCTGAGAATAGAGAAGCCCAGGCTCGTAGCTCTAGTGATAGTGACAGTGATAGTGATAACAGTGACAGTGGGAGTGACAGTAAAAGTGCAGCTGGAAGTGACAGTGGGAGCAGCAGTGATAGTGAGGCTTCTTCTAACAGTAAGGACGGTTCTGATGAGGACGTGGATATCATGAGTGATGGTGACAGAGAGCCTCTACTGACAACACAGTCCCTTGAACAGGATGCAATTGATCTCCCAGGTCATGGTTCTAGTGCAGTTGAAATCGAGGGTCATAATTCTGATGCTGTTGACATTGACGGTCATGATTCTGATGCAGTTGATATTGATGGTCATGGGTCTGATACAGTTGATGTCGAGGGGAACAGTTCAGATGAGGGTCATGGTTCTGACGCTGACAGAAAAAAAAATTCTGATAATAACTGGAAAATGGAAACAACAACTGGTACCAGTCCCACTGCAAATGGAGAAGTTGGCATTTCAGGGCAGGAACATTTTACTTCTGGTCACGACAACCTACGAGAACGCCAAAATTTTATTGGACAGTTGTTTGATGACACAGAGAATACAACAAAGAATAACTTTAAAAATGACAAACGTGACATCTCCGAGAGGCTGGGGAAAGACCAGAACCAAAAAGCCCTTGATTTTGAGCACTACAGTCAGAAATCAGCACATGAGAAAAATAGAAAATCCCAGAGCTGCAATCAGTTATCTGCCGTAAGTAAAGATTCACAGCATTCAGAGCTCAAGTATGATGCCGAACTTCGCAACGCTTCTGCCAGTCAAACGATCGATCCACTTAGAGGACTTCTGAAGTCATCTATTGAAAAGTCGAATAGACATGGTAAATCAAACAAACATTCTGATGCCTTAGGAAATGTTCGTAAATCTGACAAAGGGGACCATTTTCCACTTGAAATGCTTTCTAGTCGCTCAGGAAAGGCCTTCAGGGACAATCAGAGAGATGATGTTCATTTGAAAAATAAGTTTCCAAGGAATAAAAAAGATGGTGAGTCAGCCATTCGACCTTCATTACCTACCGAGACATCCGATAGAAAGCCCGATGAACTGGATGGAAGTGACAAGGATCCCAAGAATGTTTCAGGCTTGAGCATAGGTTCTTCTCCCTTAGATAGCCAGAGAACATATTTGGCGAAATTACCTAAGGGAAATGGACCTGTCCTCCAAAAACAAGTTTCGGAATTGGAGTTGGGTGAACTCCCTGAGCCATTGGGTGAAGATACAGCATTGAAGCCGATCGAAGAGAAAACTTCGTTTAGGCAGTCAAATTTAAAACCAAGCACTTCAGAGAAATTGGGTATTGACTCGGATAAACGAAGGTCTAAAAAATCTGACTCAAAAAAGGCAGCTCCTCCACATACAGTAAATGGTAGCAACGAACACGTTGTTGAAGATTCAGAAAGATCCCAAAAGTGGGCTTTGCAGTCACATGGGCAGAACCTTACAGGTACAGATACTGAAATCAGCTCACAGAATAAAAATTTAGAAGATGCAGCTTATAAATCTAGACAAAAAGATAGTAGAGCAAGAGTAGGGAACAGTGTGGAAGGTTATGGAGAAACAAACAAAAAAACGCCTGTTGTAAAGCATGGCTCCAAACGAGCATCCACATCCCGCTCTTCAAGGGAGAGCAAAAGACATTCGTCTGTCTCAAATTCAATCAATGGACACAAAGATGCAACTTCAATACCAGGTGGCAGTGTTGTCCGGGAGAAACAAATGACATCTTTCGGTGAAGAAGACTCTTCTTATTTGAAATACGAGAAAGCTTCTCCTGAGCTTAAGGGACCTATTAGTGATCATTTGCAGTATAAAGCCTATATGCAGGAGTATAATGATAAATATGATAGCTACCACTCCATTAACAAGATATTAGAGAGCCACAGAAATGACTTTCAAAAGTTGGGGCAAGACCTTGGGTTTGCAAAAGGAAGGGATGTGGAGAGATATAACAAAATTGTGGAGCAGATAAAGGAATCTTATTGCAAATATGGGGAGAGACACAAACGTTTGAAGAAAGTATTTGTTGTTCTCCACGAAGAATTGAAGCACCTGAAACAAAGAATGAGAGACTACGCATCATCTCATGGAAAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Occludin_ELL

Protein Analysis

1192

Amino Acids

130.75

Weight (kDa)

7.0

Isoelectric Point (pI)

51.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Occludin_ELL PF07303 900 - 997 4.3e-19 Occludin homology domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 284, 2979
AasI GACNNNNNNGTC 2 cut(s) 211, 1663
Acc65I GGTACC 1 cut(s) 1901
AccB1I GGYRCC 1 cut(s) 1901
AccB7I CCANNNNNTGG 1 cut(s) 1700
AccBSI CCGCTC 2 cut(s) 158, 3096
AccI GTMKAC 1 cut(s) 203
AccII CGCG 3 cut(s) 220, 1002, 1284
AclI AACGTT 2 cut(s) 236, 3487
AclWI GGATC 8 cut(s) 19, 623, 731, 1160, 2246, 2540, 2553, 2877
AcsI RAATTY 8 cut(s) 416, 1159, 1322, 1864, 1987, 2746, 2959, 3133
AcuI CTGAAG 4 cut(s) 690, 2291, 2389, 2748
AdeI CACNNNGTG 2 cut(s) 335, 1275
AfaI GTAC 3 cut(s) 1396, 1903, 2929
AflII CTTAAG 1 cut(s) 3260
AflIII ACRYGT 1 cut(s) 2860
AhdI GACNNNNNGTC 1 cut(s) 1036
AjiI CACGTC 1 cut(s) 1618
AjnI CCWGG 8 cut(s) 631, 781, 965, 1300, 1429, 1473, 1693, 3169
AjuI GAANNNNNNNTTGG 2 cut(s) 338, 370
AloI GAACNNNNNNTCC 2 cut(s) 1095, 1127
Alw21I GWGCWC 2 cut(s) 2112, 2205
Alw26I GTCTC 5 cut(s) 840, 2495, 3133, 3472, 3543
AlwI GGATC 8 cut(s) 19, 623, 731, 1160, 2246, 2540, 2553, 2877
AlwNI CAGNNNCTG 3 cut(s) 1042, 1271, 2936
AoxI GGCC 2 cut(s) 615, 2400
ApeKI GCWGC 9 cut(s) 197, 341, 896, 1261, 1544, 1566, 2157, 2825, 2972
ApoI RAATTY 8 cut(s) 416, 1159, 1322, 1864, 1987, 2746, 2959, 3133
ArsI GACNNNNNNTTYG 2 cut(s) 3383, 3415
AseI ATTAAT 2 cut(s) 393, 1011
Asp718I GGTACC 1 cut(s) 1901
AspLEI GCGC 2 cut(s) 579, 1002
AspS9I GGNCC 6 cut(s) 59, 761, 830, 2359, 2633, 3266
AsuC2I CCSGG 2 cut(s) 828, 3188
AvaII GGWCC 6 cut(s) 59, 761, 830, 2359, 2633, 3266
AxyI CCTNAGG 2 cut(s) 2329, 2622
BamHI GGATCC 1 cut(s) 2545
BanI GGYRCC 1 cut(s) 1901
BanII GRGCYC 1 cut(s) 2205
BbsI GAAGAC 2 cut(s) 120, 3225
Bbv12I GWGCWC 2 cut(s) 2112, 2205
BbvI GCAGC 9 cut(s) 184, 328, 908, 1248, 1556, 1578, 2144, 2837, 2984
BccI CCATC 8 cut(s) 122, 476, 649, 967, 1628, 1778, 2459, 2525
BceAI ACGGC 1 cut(s) 2159
BciT130I CCWGG 8 cut(s) 633, 783, 967, 1302, 1431, 1475, 1695, 3171
BclI TGATCA 1 cut(s) 3277
BcnI CCSGG 2 cut(s) 828, 3188
BcoDI GTCTC 5 cut(s) 840, 2495, 3133, 3472, 3543
BfaI CTAG 9 cut(s) 183, 545, 840, 1358, 1379, 1488, 1707, 2385, 2985
BfmI CTRYAG 1 cut(s) 2113
BfrI CTTAAG 1 cut(s) 3260
Bme18I GGWCC 6 cut(s) 59, 761, 830, 2359, 2633, 3266
BmeRI GACNNNNNGTC 1 cut(s) 1036
BmgBI CACGTC 1 cut(s) 1618
BmgT120I GGNCC 6 cut(s) 59, 761, 830, 2359, 2633, 3266
BmiI GGNNCC 8 cut(s) 151, 711, 1068, 1903, 2360, 2547, 3073, 3267
BoxI GACNNNNGTC 1 cut(s) 3121
BpiI GAAGAC 2 cut(s) 120, 3225
Bpu10I CCTNAGC 3 cut(s) 2392, 2682, 3255
BpuEI CTTGAG 2 cut(s) 2189, 2587
BpuMI CCSGG 2 cut(s) 828, 3188
Bsa29I ATCGAT 1 cut(s) 2250
BsaJI CCNNGG 9 cut(s) 251, 632, 680, 782, 1172, 1473, 1693, 2450, 3394
BsaXI ACNNNNNCTCC 8 cut(s) 1095, 1125, 1519, 1549, 1555, 1585, 2625, 2655
Bse1I ACTGG 9 cut(s) 746, 752, 917, 1265, 1883, 1903, 1905, 2238, 2532
Bse21I CCTNAGG 2 cut(s) 2329, 2622
BseBI CCWGG 8 cut(s) 633, 783, 967, 1302, 1431, 1475, 1695, 3171
BseCI ATCGAT 1 cut(s) 2250
BseDI CCNNGG 9 cut(s) 251, 632, 680, 782, 1172, 1473, 1693, 2450, 3394
BseMII CTCAG 8 cut(s) 372, 594, 1263, 1382, 1449, 2406, 2673, 3246
BseNI ACTGG 9 cut(s) 746, 752, 917, 1265, 1883, 1903, 1905, 2238, 2532
BseRI GAGGAG 3 cut(s) 48, 78, 2820
BseXI GCAGC 9 cut(s) 184, 328, 908, 1248, 1556, 1578, 2144, 2837, 2984
BseYI CCCAGC 1 cut(s) 2071
BsgI GTGCAG 3 cut(s) 1297, 1563, 1731
Bsh1236I CGCG 3 cut(s) 220, 1002, 1284
Bsh1285I CGRYCG 2 cut(s) 2250, 2718
BshFI GGCC 2 cut(s) 617, 2402
BshNI GGYRCC 1 cut(s) 1901
BshVI ATCGAT 1 cut(s) 2250
BsiEI CGRYCG 2 cut(s) 2250, 2718
BsiHKAI GWGCWC 2 cut(s) 2112, 2205
BsiSI CCGG 2 cut(s) 828, 3187
BslFI GGGAC 6 cut(s) 1001, 1651, 1893, 2372, 2423, 3279
BsmAI GTCTC 5 cut(s) 840, 2495, 3133, 3472, 3543
BsmBI CGTCTC 1 cut(s) 840
BsmFI GGGAC 6 cut(s) 1001, 1651, 1893, 2372, 2423, 3279
BsmI GAATGC 1 cut(s) 2194
BsnI GGCC 2 cut(s) 617, 2402
Bsp1286I GDGCHC 2 cut(s) 2112, 2205
Bsp19I CCATGG 1 cut(s) 680
Bsp68I TCGCGA 1 cut(s) 1284
BspANI GGCC 2 cut(s) 617, 2402
BspCNI CTCAG 8 cut(s) 373, 593, 1264, 1383, 1450, 2405, 2674, 3247
BspDI ATCGAT 1 cut(s) 2250
BspFNI CGCG 3 cut(s) 220, 1002, 1284
BspHI TCATGA 3 cut(s) 1441, 1626, 1759
BspLI GGNNCC 8 cut(s) 151, 711, 1068, 1903, 2360, 2547, 3073, 3267
BspPI GGATC 8 cut(s) 19, 623, 731, 1160, 2246, 2540, 2553, 2877
BspQI GCTCTTC 1 cut(s) 3103
BspT107I GGYRCC 1 cut(s) 1901
BspTI CTTAAG 1 cut(s) 3260
BsrBI CCGCTC 2 cut(s) 158, 3096
BsrI ACTGG 9 cut(s) 746, 752, 917, 1265, 1883, 1903, 1905, 2238, 2532
BssECI CCNNGG 9 cut(s) 251, 632, 680, 782, 1172, 1473, 1693, 2450, 3394
BssT1I CCWWGG 4 cut(s) 680, 1172, 2450, 3394
Bst2UI CCWGG 8 cut(s) 633, 783, 967, 1302, 1431, 1475, 1695, 3171
Bst6I CTCTTC 3 cut(s) 2715, 3103, 3229
BstAFI CTTAAG 1 cut(s) 3260
BstAPI GCANNNNNTGC 1 cut(s) 1042
BstC8I GCNNGC 2 cut(s) 167, 1337
BstDSI CCRYGG 1 cut(s) 680
BstENI CCTNNNNNAGG 3 cut(s) 1061, 1299, 1673
BstFNI CGCG 3 cut(s) 220, 1002, 1284
BstHHI GCGC 2 cut(s) 579, 1002
BstMAI GTCTC 5 cut(s) 840, 2495, 3133, 3472, 3543
BstMCI CGRYCG 2 cut(s) 2250, 2718
BstMWI GCNNNNNNNGC 3 cut(s) 512, 1042, 2200
BstNI CCWGG 8 cut(s) 633, 783, 967, 1302, 1431, 1475, 1695, 3171
BstPAI GACNNNNGTC 1 cut(s) 3121
BstSFI CTRYAG 1 cut(s) 2113
BstUI CGCG 3 cut(s) 220, 1002, 1284
BstV1I GCAGC 9 cut(s) 184, 328, 908, 1248, 1556, 1578, 2144, 2837, 2984
BstV2I GAAGAC 2 cut(s) 120, 3225
BstX2I RGATCY 3 cut(s) 628, 2545, 2882
BstXI CCANNNNNNTGG 1 cut(s) 966
BstYI RGATCY 3 cut(s) 628, 2545, 2882
Bsu15I ATCGAT 1 cut(s) 2250
Bsu36I CCTNAGG 2 cut(s) 2329, 2622
BsuRI GGCC 2 cut(s) 617, 2402
BsuTUI ATCGAT 1 cut(s) 2250
BtgI CCRYGG 1 cut(s) 680
BtrI CACGTC 1 cut(s) 1618
BtsI GCAGTG 5 cut(s) 61, 1040, 1576, 1911, 3184
BtuMI TCGCGA 1 cut(s) 1284
Cac8I GCNNGC 2 cut(s) 167, 1337
CaiI CAGNNNCTG 3 cut(s) 1042, 1271, 2936
CciI TCATGA 3 cut(s) 1441, 1626, 1759
CfoI GCGC 2 cut(s) 579, 1002
Cfr13I GGNCC 6 cut(s) 59, 761, 830, 2359, 2633, 3266
ClaI ATCGAT 1 cut(s) 2250
CpoI CGGWCCG 1 cut(s) 830
CseI GACGC 2 cut(s) 189, 1856
CsiI ACCWGGT 2 cut(s) 1429, 3169
Csp6I GTAC 3 cut(s) 1395, 1902, 2928
CspI CGGWCCG 1 cut(s) 830
CviQI GTAC 3 cut(s) 1395, 1902, 2928
DraI TTTAAA 2 cut(s) 2041, 2751
DraIII CACNNNGTG 2 cut(s) 335, 1275
DrdI GACNNNNNNGTC 2 cut(s) 211, 1663
DriI GACNNNNNGTC 1 cut(s) 1036
DseDI GACNNNNNNGTC 2 cut(s) 211, 1663
Eam1104I CTCTTC 3 cut(s) 2715, 3103, 3229
Eam1105I GACNNNNNGTC 1 cut(s) 1036
EarI CTCTTC 3 cut(s) 2715, 3103, 3229
EciI GGCGGA 1 cut(s) 142
Ecl136II GAGCTC 1 cut(s) 2203
Eco130I CCWWGG 4 cut(s) 680, 1172, 2450, 3394
Eco147I AGGCCT 1 cut(s) 2402
Eco24I GRGCYC 1 cut(s) 2205
Eco32I GATATC 2 cut(s) 1054, 1624
Eco47I GGWCC 6 cut(s) 59, 761, 830, 2359, 2633, 3266
Eco53kI GAGCTC 1 cut(s) 2203
Eco57I CTGAAG 4 cut(s) 690, 2291, 2389, 2748
Eco81I CCTNAGG 2 cut(s) 2329, 2622
EcoICRI GAGCTC 1 cut(s) 2203
EcoNI CCTNNNNNAGG 3 cut(s) 1061, 1299, 1673
EcoO109I RGGNCCY 1 cut(s) 3266
EcoRII CCWGG 8 cut(s) 631, 781, 965, 1300, 1429, 1473, 1693, 3169
EcoRV GATATC 2 cut(s) 1054, 1624
EcoT14I CCWWGG 4 cut(s) 680, 1172, 2450, 3394
EcoT38I GRGCYC 1 cut(s) 2205
ErhI CCWWGG 4 cut(s) 680, 1172, 2450, 3394
Esp3I CGTCTC 1 cut(s) 840
FalI AAGNNNNNCTT 2 cut(s) 2021, 2053
FaqI GGGAC 6 cut(s) 1001, 1651, 1893, 2372, 2423, 3279
FauI CCCGC 2 cut(s) 1129, 3101
FauNDI CATATG 2 cut(s) 567, 865
FbaI TGATCA 1 cut(s) 3277
FblI GTMKAC 1 cut(s) 203
FriOI GRGCYC 1 cut(s) 2205
FspBI CTAG 9 cut(s) 183, 545, 840, 1358, 1379, 1488, 1707, 2385, 2985
GlaI GCGC 2 cut(s) 578, 1001
GsaI CCCAGC 1 cut(s) 2075
HaeIII GGCC 2 cut(s) 617, 2402
HapII CCGG 2 cut(s) 828, 3187
HgaI GACGC 2 cut(s) 189, 1856
HhaI GCGC 2 cut(s) 579, 1002
Hin6I GCGC 2 cut(s) 577, 1000
HinP1I GCGC 2 cut(s) 577, 1000
HincII GTYRAC 4 cut(s) 204, 555, 1411, 1747
HindII GTYRAC 4 cut(s) 204, 555, 1411, 1747
HindIII AAGCTT 1 cut(s) 3246
HpaII CCGG 2 cut(s) 828, 3187
Hpy99I CGWCG 3 cut(s) 19, 205, 220
HpyCH4IV ACGT 7 cut(s) 22, 236, 531, 1617, 2053, 2862, 3487
HpyF10VI GCNNNNNNNGC 3 cut(s) 512, 1042, 2200
HpySE526I ACGT 7 cut(s) 22, 236, 531, 1617, 2053, 2862, 3487
HspAI GCGC 2 cut(s) 577, 1000
KpnI GGTACC 1 cut(s) 1905
Ksp22I TGATCA 1 cut(s) 3277
LguI GCTCTTC 1 cut(s) 3103
LmnI GCTCC 9 cut(s) 155, 163, 338, 1072, 1174, 1563, 2833, 3077, 3442
Lsp1109I GCAGC 9 cut(s) 184, 328, 908, 1248, 1556, 1578, 2144, 2837, 2984
MabI ACCWGGT 2 cut(s) 1429, 3169
MaeI CTAG 9 cut(s) 183, 545, 840, 1358, 1379, 1488, 1707, 2385, 2985
MaeII ACGT 7 cut(s) 22, 236, 531, 1617, 2053, 2862, 3487
MbiI CCGCTC 2 cut(s) 158, 3096
MfeI CAATTG 2 cut(s) 1256, 1683
MflI RGATCY 3 cut(s) 628, 2545, 2882
MhlI GDGCHC 2 cut(s) 2112, 2205
MlyI GAGTC 5 cut(s) 560, 2480, 2777, 2807, 3215
MmeI TCCRAC 3 cut(s) 736, 1081, 1182
MslI CAYNNNNRTG 4 cut(s) 471, 2322, 3153, 3366
MspA1I CMGCKG 2 cut(s) 169, 1547
MspCI CTTAAG 1 cut(s) 3260
MspI CCGG 2 cut(s) 828, 3187
MunI CAATTG 2 cut(s) 1256, 1683
Mva1269I GAATGC 1 cut(s) 2194
MvaI CCWGG 8 cut(s) 633, 783, 967, 1302, 1431, 1475, 1695, 3171
MvnI CGCG 3 cut(s) 220, 1002, 1284
MwoI GCNNNNNNNGC 3 cut(s) 512, 1042, 2200
NciI CCSGG 2 cut(s) 828, 3188
NcoI CCATGG 1 cut(s) 680
NdeI CATATG 2 cut(s) 567, 865
NlaIV GGNNCC 8 cut(s) 151, 711, 1068, 1903, 2360, 2547, 3073, 3267
NruI TCGCGA 1 cut(s) 1284
PagI TCATGA 3 cut(s) 1441, 1626, 1759
PceI AGGCCT 1 cut(s) 2402
PciSI GCTCTTC 1 cut(s) 3103
PctI GAATGC 1 cut(s) 2194
PfeI GAWTC 5 cut(s) 637, 1763, 2186, 2873, 3455
PflMI CCANNNNNTGG 1 cut(s) 1700
PfoI TCCNGGA 2 cut(s) 1300, 3186
Ple19I CGATCG 2 cut(s) 2250, 2718
PleI GAGTC 5 cut(s) 559, 2479, 2777, 2807, 3215
PpsI GAGTC 5 cut(s) 559, 2479, 2777, 2807, 3215
PpuMI RGGWCCY 1 cut(s) 3266
PshAI GACNNNNGTC 1 cut(s) 3121
PshBI ATTAAT 2 cut(s) 393, 1011
PsiI TTATAA 2 cut(s) 284, 2979
Psp124BI GAGCTC 1 cut(s) 2205
Psp1406I AACGTT 2 cut(s) 236, 3487
Psp5II RGGWCCY 1 cut(s) 3266
Psp6I CCWGG 8 cut(s) 631, 781, 965, 1300, 1429, 1473, 1693, 3169
PspFI CCCAGC 1 cut(s) 2071
PspGI CCWGG 8 cut(s) 631, 781, 965, 1300, 1429, 1473, 1693, 3169
PspN4I GGNNCC 8 cut(s) 151, 711, 1068, 1903, 2360, 2547, 3073, 3267
PspPI GGNCC 6 cut(s) 59, 761, 830, 2359, 2633, 3266
PspPPI RGGWCCY 1 cut(s) 3266
PsrI GAACNNNNNNTAC 4 cut(s) 1588, 1620, 3492, 3524
PstNI CAGNNNCTG 3 cut(s) 1042, 1271, 2936
PsuI RGATCY 3 cut(s) 628, 2545, 2882
PvuI CGATCG 2 cut(s) 2250, 2718
PvuII CAGCTG 1 cut(s) 1547
RruI TCGCGA 1 cut(s) 1284
RsaI GTAC 3 cut(s) 1396, 1903, 2929
RsaNI GTAC 3 cut(s) 1395, 1902, 2928
RseI CAYNNNNRTG 4 cut(s) 471, 2322, 3153, 3366
Rsr2I CGGWCCG 1 cut(s) 830
RsrII CGGWCCG 1 cut(s) 830
SacI GAGCTC 1 cut(s) 2205
SalI GTCGAC 1 cut(s) 202
SapI GCTCTTC 1 cut(s) 3103
Sau96I GGNCC 6 cut(s) 59, 761, 830, 2359, 2633, 3266
SchI GAGTC 5 cut(s) 560, 2480, 2777, 2807, 3215
SduI GDGCHC 2 cut(s) 2112, 2205
SexAI ACCWGGT 2 cut(s) 1429, 3169
SfcI CTRYAG 1 cut(s) 2113
SinI GGWCC 6 cut(s) 59, 761, 830, 2359, 2633, 3266
SmiMI CAYNNNNRTG 4 cut(s) 471, 2322, 3153, 3366
SmlI CTYRAG 3 cut(s) 2204, 2566, 3260
SmoI CTYRAG 3 cut(s) 2204, 2566, 3260
SseBI AGGCCT 1 cut(s) 2402
SspMI CTAG 9 cut(s) 183, 545, 840, 1358, 1379, 1488, 1707, 2385, 2985
SstI GAGCTC 1 cut(s) 2205
StuI AGGCCT 1 cut(s) 2402
StyI CCWWGG 4 cut(s) 680, 1172, 2450, 3394
TaiI ACGT 7 cut(s) 25, 239, 534, 1620, 2056, 2865, 3490
TauI GCSGC 2 cut(s) 158, 197
TfiI GAWTC 5 cut(s) 637, 1763, 2186, 2873, 3455
TseI GCWGC 9 cut(s) 197, 341, 896, 1261, 1544, 1566, 2157, 2825, 2972
TspDTI ATGAA 8 cut(s) 69, 474, 584, 818, 1430, 2420, 2478, 2538
TspGWI ACGGA 1 cut(s) 1359
Van91I CCANNNNNTGG 1 cut(s) 1700
Vha464I CTTAAG 1 cut(s) 3260
VpaK11BI GGWCC 6 cut(s) 59, 761, 830, 2359, 2633, 3266
VspI ATTAAT 2 cut(s) 393, 1011
XagI CCTNNNNNAGG 3 cut(s) 1061, 1299, 1673
XapI RAATTY 8 cut(s) 416, 1159, 1322, 1864, 1987, 2746, 2959, 3133
XbaI TCTAGA 2 cut(s) 544, 2984
XcmI CCANNNNNNNNNTGG 1 cut(s) 1991
XmiI GTMKAC 1 cut(s) 203
XspI CTAG 9 cut(s) 183, 545, 840, 1358, 1379, 1488, 1707, 2385, 2985
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.