AT3G23840

ECERIFERUM 26-like

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
8610979 .. 8612742
1764 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G23840.1

Sequence Viewer

Length: 1263 bp
ATGGGTCTAGTTCAAGAAGAGGGAAGCGGTCCTGTTCATGGCTTTCGGTTATCAACCGTGAGTGCGTCCCTGCCGTCAGAGACAGGTACGACCCACGAGCCCACCGGTTTAGACCTCGCCATGAAGCTCCACTACCTAAAGGCGGTTTACATTTACTCGGCCGGGACAGCACGTGACTTGACTGTGATGGACGTGAAGGCGCCTTTGTTTTCAGTGTTCTACCAGATCCCTTGCATCATTGGCAGGTTCAGGCGACATGAATCGGGACGTCCGTACCTAAAGTGCAACGACTGTGGCACACGTTTCGTGGAGAGTCATTGTGATCTCACTGTGGAGGAGTGGCTCCGTGTACCGGACCGGTCCGTTGATGAGTCTTTGGTTTACCATCAACCAGTTGGACCAGATTTGGCATTCTCTCCTTTGCTCTATATTCAGATGACCCGGTTTAGCTGCGGTGGATTAGCTTTGGGCTTAAGCTGGGCTCATATCATGGGAGATCCATTCTCTCTTTCTCATTTCTTCAACTTATGGGCTCAAGCCTTTGCTGGTGGGAAGATCTACTGCCCCAAAACCTCTGTCACAGAGAGAGACTTTCAAAACCCGACCTCAACATTCAAAAAACCGGATTCAGTCAAACAGGTTGACCTGGTTGGAGATCTCTGGGTCGCTCCGAATAACAGCAAAATGACAACATTCTCCTTCAATTTAACGGTTAACGATTTAAAAACACATTTTCCGGTGAACGGAGACGGCGAATTCGAGATTCTCACTGGAATCATATGGAAATGTGTTGCGACGGTGAGGGGAGAATCAGCTCCGGTGACGATTACGGTTATCAGATCGGATCCGAAGAAGTTGAAGCCTAGAGCGGTGAGAAATGGTCAGATGATAAGTTCCATTCACGTCGATTTCTCGGTGGCGGAGGCGAGTTTGGAGGAGATTGTGAAATCGATCGGTGAAGCGAAAGATGAGAGGGTTGTGATCGATGAGATTGTTGATGATGTTTCGGATTTTATTGTTTACGGAGCGAATTTAACGTTTGTGGATATGAGTGAAGTTGATTTTTATGAGGCGAAAGTTATGGGGAAATCGCCGGAATCGGTTTATTGTAATGTTCAGGGGATTGGGGACGACGGAGCAGTGGTGGTTTTACCGGGGGTTGTGGAGGAGGAGAGGGTTGTGACGGTGACATTACCGGTGGATGAGATTGAGAAGGTGAAATGGGAAATGAAGAAATGTGGTTTGATCACGCCGTTAGTTTAA

Protein Analysis

420

Amino Acids

46.43

Weight (kDa)

5.17

Isoelectric Point (pI)

32.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 37 - 409 6e-27 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 271
Acc36I ACCTGC 1 cut(s) 234
AccB1I GGYRCC 1 cut(s) 199
AccBSI CCGCTC 1 cut(s) 869
AciI CCGC 5 cut(s) 27, 143, 453, 869, 920
AclI AACGTT 1 cut(s) 1037
AclWI GGATC 4 cut(s) 220, 491, 839, 852
AcoI YGGCCR 1 cut(s) 159
AcsI RAATTY 2 cut(s) 755, 1030
AcvI CACGTG 1 cut(s) 173
AcyI GRCGYC 2 cut(s) 200, 268
AfaI GTAC 3 cut(s) 88, 275, 351
AfiI CCNNNNNNNGG 4 cut(s) 38, 142, 352, 743
AflII CTTAAG 1 cut(s) 472
AflIII ACRYGT 1 cut(s) 299
AgeI ACCGGT 3 cut(s) 104, 357, 1195
AgsI TTSAA 6 cut(s) 14, 523, 596, 616, 703, 859
AjiI CACGTC 2 cut(s) 193, 904
AjnI CCWGG 1 cut(s) 645
AluBI AGCT 5 cut(s) 127, 450, 464, 477, 815
AluI AGCT 5 cut(s) 127, 450, 464, 477, 815
Alw26I GTCTC 3 cut(s) 74, 582, 741
AlwI GGATC 4 cut(s) 220, 491, 839, 852
AoxI GGCC 1 cut(s) 159
ApeKI GCWGC 1 cut(s) 450
ApoI RAATTY 2 cut(s) 755, 1030
ArsI GACNNNNNNTTYG 4 cut(s) 561, 593, 740, 772
AsiGI ACCGGT 3 cut(s) 104, 357, 1195
AspLEI GCGC 1 cut(s) 202
AspS9I GGNCC 4 cut(s) 29, 355, 360, 398
AsuC2I CCSGG 3 cut(s) 163, 442, 1155
AsuHPI GGTGA 7 cut(s) 751, 811, 832, 883, 968, 1198, 1228
AvaII GGWCC 4 cut(s) 29, 355, 360, 398
BaeI ACNNNNGTAYC 2 cut(s) 257, 290
BamHI GGATCC 1 cut(s) 844
BanI GGYRCC 1 cut(s) 199
BanII GRGCYC 3 cut(s) 102, 484, 535
BarI GAAGNNNNNNTAC 2 cut(s) 116, 148
BauI CACGAG 1 cut(s) 95
BbrPI CACGTG 1 cut(s) 173
BbvI GCAGC 1 cut(s) 437
BccI CCATC 2 cut(s) 181, 393
BceAI ACGGC 3 cut(s) 58, 766, 1237
BcgI CGANNNNNNTGC 2 cut(s) 286, 320
BciT130I CCWGG 1 cut(s) 647
BclI TGATCA 1 cut(s) 1245
BcnI CCSGG 3 cut(s) 163, 442, 1155
BcoDI GTCTC 3 cut(s) 74, 582, 741
BfaI CTAG 2 cut(s) 8, 864
BfoI RGCGCY 1 cut(s) 203
BfrI CTTAAG 1 cut(s) 472
BfuAI ACCTGC 1 cut(s) 234
BglII AGATCT 2 cut(s) 555, 655
BisI GCNGC 1 cut(s) 451
BlsI GCNGC 1 cut(s) 452
Bme1390I CCNGG 4 cut(s) 163, 442, 647, 1155
Bme18I GGWCC 4 cut(s) 29, 355, 360, 398
BmgBI CACGTC 2 cut(s) 193, 904
BmgT120I GGNCC 4 cut(s) 29, 355, 360, 398
BmiI GGNNCC 3 cut(s) 201, 344, 846
BmrFI CCNGG 4 cut(s) 163, 442, 647, 1155
BmsI GCATC 1 cut(s) 243
BpuEI CTTGAG 1 cut(s) 519
BpuMI CCSGG 3 cut(s) 163, 442, 1155
Bsa29I ATCGAT 2 cut(s) 950, 984
BsaAI YACGTR 1 cut(s) 173
BsaHI GRCGYC 2 cut(s) 200, 268
BsaJI CCNNGG 1 cut(s) 1154
BsaWI WCCGGW 7 cut(s) 104, 352, 357, 622, 736, 817, 1195
BsaXI ACNNNNNCTCC 2 cut(s) 1128, 1158
Bsc4I CCNNNNNNNGG 4 cut(s) 38, 142, 352, 743
Bse118I RCCGGY 3 cut(s) 104, 357, 1195
Bse1I ACTGG 2 cut(s) 392, 775
BseBI CCWGG 1 cut(s) 647
BseCI ATCGAT 2 cut(s) 950, 984
BseDI CCNNGG 1 cut(s) 1154
BseGI GGATG 1 cut(s) 1207
BseLI CCNNNNNNNGG 4 cut(s) 38, 142, 352, 743
BseNI ACTGG 2 cut(s) 392, 775
BseRI GAGGAG 4 cut(s) 350, 950, 1181, 1184
BseX3I CGGCCG 1 cut(s) 159
BseXI GCAGC 1 cut(s) 437
BseYI CCCAGC 1 cut(s) 477
Bsh1285I CGRYCG 2 cut(s) 162, 954
BshFI GGCC 1 cut(s) 161
BshNI GGYRCC 1 cut(s) 199
BshTI ACCGGT 3 cut(s) 104, 357, 1195
BshVI ATCGAT 2 cut(s) 950, 984
BsiEI CGRYCG 2 cut(s) 162, 954
BslFI GGGAC 4 cut(s) 52, 178, 279, 1142
BslI CCNNNNNNNGG 4 cut(s) 38, 142, 352, 743
BsmAI GTCTC 3 cut(s) 74, 582, 741
BsmBI CGTCTC 1 cut(s) 741
BsmFI GGGAC 4 cut(s) 52, 178, 279, 1142
BsmI GAATGC 1 cut(s) 410
BsnI GGCC 1 cut(s) 161
Bsp1286I GDGCHC 3 cut(s) 102, 484, 535
BspACI CCGC 5 cut(s) 27, 143, 453, 869, 920
BspANI GGCC 1 cut(s) 161
BspDI ATCGAT 2 cut(s) 950, 984
BspLI GGNNCC 3 cut(s) 201, 344, 846
BspMI ACCTGC 1 cut(s) 234
BspPI GGATC 4 cut(s) 220, 491, 839, 852
BspT107I GGYRCC 1 cut(s) 199
BspTI CTTAAG 1 cut(s) 472
BsrBI CCGCTC 1 cut(s) 869
BsrFI RCCGGY 3 cut(s) 104, 357, 1195
BsrI ACTGG 2 cut(s) 392, 775
BssAI RCCGGY 3 cut(s) 104, 357, 1195
BssECI CCNNGG 1 cut(s) 1154
BssNI GRCGYC 2 cut(s) 200, 268
BssSI CACGAG 1 cut(s) 95
Bst2BI CACGAG 1 cut(s) 95
Bst2UI CCWGG 1 cut(s) 647
Bst4CI ACNGT 8 cut(s) 58, 184, 293, 331, 712, 799, 832, 1186
Bst6I CTCTTC 1 cut(s) 12
BstACI GRCGYC 2 cut(s) 200, 268
BstAFI CTTAAG 1 cut(s) 472
BstBAI YACGTR 1 cut(s) 173
BstF5I GGATG 1 cut(s) 1207
BstH2I RGCGCY 1 cut(s) 203
BstHHI GCGC 1 cut(s) 202
BstMAI GTCTC 3 cut(s) 74, 582, 741
BstMCI CGRYCG 2 cut(s) 162, 954
BstMWI GCNNNNNNNGC 2 cut(s) 167, 240
BstNI CCWGG 1 cut(s) 647
BstSCI CCNGG 4 cut(s) 161, 440, 645, 1153
BstV1I GCAGC 1 cut(s) 437
BstX2I RGATCY 5 cut(s) 225, 496, 555, 655, 844
BstYI RGATCY 5 cut(s) 225, 496, 555, 655, 844
BstZI CGGCCG 1 cut(s) 159
Bsu15I ATCGAT 2 cut(s) 950, 984
BsuRI GGCC 1 cut(s) 161
BsuTUI ATCGAT 2 cut(s) 950, 984
BtrI CACGTC 2 cut(s) 193, 904
BtsCI GGATG 1 cut(s) 1207
BtsI GCAGTG 1 cut(s) 1146
BtsIMutI CAGTG 4 cut(s) 219, 327, 768, 1146
BveI ACCTGC 1 cut(s) 234
CfoI GCGC 1 cut(s) 202
Cfr10I RCCGGY 3 cut(s) 104, 357, 1195
Cfr13I GGNCC 4 cut(s) 29, 355, 360, 398
ClaI ATCGAT 2 cut(s) 950, 984
CpoI CGGWCCG 2 cut(s) 355, 360
CseI GACGC 1 cut(s) 54
CsiI ACCWGGT 1 cut(s) 645
Csp6I GTAC 3 cut(s) 87, 274, 350
CspAI ACCGGT 3 cut(s) 104, 357, 1195
CspCI CAANNNNNGTGG 2 cut(s) 274, 309
CspI CGGWCCG 2 cut(s) 355, 360
CviAII CATG 4 cut(s) 38, 121, 257, 490
CviQI GTAC 3 cut(s) 87, 274, 350
DinI GGCGCC 1 cut(s) 201
DraI TTTAAA 1 cut(s) 723
EaeI YGGCCR 1 cut(s) 159
EagI CGGCCG 1 cut(s) 159
Eam1104I CTCTTC 1 cut(s) 12
EarI CTCTTC 1 cut(s) 12
EciI GGCGGA 1 cut(s) 935
EclXI CGGCCG 1 cut(s) 159
Eco24I GRGCYC 3 cut(s) 102, 484, 535
Eco47I GGWCC 4 cut(s) 29, 355, 360, 398
Eco52I CGGCCG 1 cut(s) 159
Eco72I CACGTG 1 cut(s) 173
EcoRI GAATTC 1 cut(s) 755
EcoRII CCWGG 1 cut(s) 645
EcoT38I GRGCYC 3 cut(s) 102, 484, 535
EgeI GGCGCC 1 cut(s) 201
EheI GGCGCC 1 cut(s) 201
Esp3I CGTCTC 1 cut(s) 741
FaeI CATG 4 cut(s) 41, 124, 260, 493
FaqI GGGAC 4 cut(s) 52, 178, 279, 1142
FatI CATG 4 cut(s) 37, 120, 256, 489
FauNDI CATATG 1 cut(s) 779
FbaI TGATCA 1 cut(s) 1245
Fnu4HI GCNGC 1 cut(s) 451
FokI GGATG 1 cut(s) 1214
FriOI GRGCYC 3 cut(s) 102, 484, 535
Fsp4HI GCNGC 1 cut(s) 451
FspBI CTAG 2 cut(s) 8, 864
GlaI GCGC 1 cut(s) 201
GluI GCNGC 1 cut(s) 451
GsaI CCCAGC 1 cut(s) 481
HaeII RGCGCY 1 cut(s) 203
HaeIII GGCC 1 cut(s) 161
HgaI GACGC 1 cut(s) 54
HhaI GCGC 1 cut(s) 202
Hin1I GRCGYC 2 cut(s) 200, 268
Hin1II CATG 4 cut(s) 41, 124, 260, 493
Hin6I GCGC 1 cut(s) 200
HinP1I GCGC 1 cut(s) 200
HincII GTYRAC 2 cut(s) 643, 715
HindII GTYRAC 2 cut(s) 643, 715
HinfI GANTC 8 cut(s) 260, 313, 371, 626, 763, 774, 809, 1097
HpaI GTTAAC 1 cut(s) 715
HphI GGTGA 7 cut(s) 751, 811, 832, 883, 968, 1198, 1228
Hpy166II GTNNAC 7 cut(s) 148, 350, 382, 643, 715, 742, 1021
Hpy188I TCNGA 8 cut(s) 79, 435, 672, 839, 844, 849, 885, 1009
Hpy188III TCNNGA 3 cut(s) 14, 264, 760
Hpy8I GTNNAC 7 cut(s) 148, 350, 382, 643, 715, 742, 1021
Hpy99I CGWCG 3 cut(s) 799, 908, 1136
HpyAV CCTTC 3 cut(s) 190, 709, 1207
HpyCH4III ACNGT 8 cut(s) 58, 184, 293, 331, 712, 799, 832, 1186
HpyCH4IV ACGT 6 cut(s) 172, 192, 268, 301, 903, 1037
HpyCH4V TGCA 2 cut(s) 234, 285
HpyF10VI GCNNNNNNNGC 2 cut(s) 167, 240
HpySE526I ACGT 6 cut(s) 172, 192, 268, 301, 903, 1037
Hsp92I GRCGYC 2 cut(s) 200, 268
Hsp92II CATG 4 cut(s) 41, 124, 260, 493
HspAI GCGC 1 cut(s) 200
KasI GGCGCC 1 cut(s) 199
Ksp22I TGATCA 1 cut(s) 1245
KspAI GTTAAC 1 cut(s) 715
LmnI GCTCC 6 cut(s) 132, 348, 673, 820, 1025, 1136
Lsp1109I GCAGC 1 cut(s) 437
LweI GCATC 1 cut(s) 243
MabI ACCWGGT 1 cut(s) 645
MaeI CTAG 2 cut(s) 8, 864
MaeII ACGT 6 cut(s) 172, 192, 268, 301, 903, 1037
MaeIII GTNAC 5 cut(s) 173, 577, 820, 1180, 1186
MbiI CCGCTC 1 cut(s) 869
MboII GAAGA 5 cut(s) 29, 511, 565, 862, 1243
MflI RGATCY 5 cut(s) 225, 496, 555, 655, 844
MhlI GDGCHC 3 cut(s) 102, 484, 535
MluCI AATT 3 cut(s) 703, 755, 1030
Mly113I GGCGCC 1 cut(s) 200
MlyI GAGTC 2 cut(s) 322, 380
MmeI TCCRAC 2 cut(s) 376, 631
MseI TTAA 6 cut(s) 473, 707, 714, 722, 1034, 1261
MspCI CTTAAG 1 cut(s) 472
MspR9I CCNGG 4 cut(s) 163, 442, 647, 1155
Mva1269I GAATGC 1 cut(s) 410
MvaI CCWGG 1 cut(s) 647
MwoI GCNNNNNNNGC 2 cut(s) 167, 240
NarI GGCGCC 1 cut(s) 200
NciI CCSGG 3 cut(s) 163, 442, 1155
NdeI CATATG 1 cut(s) 779
NlaIII CATG 4 cut(s) 41, 124, 260, 493
NlaIV GGNNCC 3 cut(s) 201, 344, 846
NmeAIII GCCGAG 1 cut(s) 137
NmuCI GTSAC 5 cut(s) 173, 577, 820, 1180, 1186
PcsI WCGNNNNNNNCGW 3 cut(s) 269, 750, 756
PctI GAATGC 1 cut(s) 410
PfeI GAWTC 6 cut(s) 260, 626, 763, 774, 809, 1097
PinAI ACCGGT 3 cut(s) 104, 357, 1195
PkrI GCNGC 1 cut(s) 452
Ple19I CGATCG 1 cut(s) 954
PleI GAGTC 2 cut(s) 321, 379
PluTI GGCGCC 1 cut(s) 203
PmaCI CACGTG 1 cut(s) 173
PmlI CACGTG 1 cut(s) 173
PpsI GAGTC 2 cut(s) 321, 379
Ppu21I YACGTR 1 cut(s) 173
Psp1406I AACGTT 1 cut(s) 1037
Psp6I CCWGG 1 cut(s) 645
PspCI CACGTG 1 cut(s) 173
PspFI CCCAGC 1 cut(s) 477
PspGI CCWGG 1 cut(s) 645
PspN4I GGNNCC 3 cut(s) 201, 344, 846
PspPI GGNCC 4 cut(s) 29, 355, 360, 398
PsuI RGATCY 5 cut(s) 225, 496, 555, 655, 844
PvuI CGATCG 1 cut(s) 954
RsaI GTAC 3 cut(s) 88, 275, 351
RsaNI GTAC 3 cut(s) 87, 274, 350
Rsr2I CGGWCCG 2 cut(s) 355, 360
RsrII CGGWCCG 2 cut(s) 355, 360
SaqAI TTAA 6 cut(s) 473, 707, 714, 722, 1034, 1261
SatI GCNGC 1 cut(s) 451
Sau96I GGNCC 4 cut(s) 29, 355, 360, 398
SchI GAGTC 2 cut(s) 322, 380
ScrFI CCNGG 4 cut(s) 163, 442, 647, 1155
SduI GDGCHC 3 cut(s) 102, 484, 535
SexAI ACCWGGT 1 cut(s) 645
SfaNI GCATC 1 cut(s) 243
SfoI GGCGCC 1 cut(s) 201
SinI GGWCC 4 cut(s) 29, 355, 360, 398
SmlI CTYRAG 2 cut(s) 472, 534
SmoI CTYRAG 2 cut(s) 472, 534
Sse9I AATT 3 cut(s) 703, 755, 1030
SsiI CCGC 5 cut(s) 27, 143, 453, 869, 920
SspDI GGCGCC 1 cut(s) 199
SspMI CTAG 2 cut(s) 8, 864
StyD4I CCNGG 4 cut(s) 161, 440, 645, 1153
TaaI ACNGT 8 cut(s) 58, 184, 293, 331, 712, 799, 832, 1186
TaiI ACGT 6 cut(s) 175, 195, 271, 304, 906, 1040
TaqI TCGA 4 cut(s) 759, 906, 950, 984
TasI AATT 3 cut(s) 703, 755, 1030
TfiI GAWTC 6 cut(s) 260, 626, 763, 774, 809, 1097
Tru1I TTAA 6 cut(s) 473, 707, 714, 722, 1034, 1261
Tru9I TTAA 6 cut(s) 473, 707, 714, 722, 1034, 1261
TscAI CASTG 4 cut(s) 219, 334, 775, 1146
TseFI GTSAC 5 cut(s) 173, 577, 820, 1180, 1186
TseI GCWGC 1 cut(s) 450
Tsp45I GTSAC 5 cut(s) 173, 577, 820, 1180, 1186
TspDTI ATGAA 4 cut(s) 26, 137, 273, 1244
TspGWI ACGGA 6 cut(s) 261, 335, 352, 759, 1038, 1149
TspRI CASTG 4 cut(s) 219, 334, 775, 1146
Vha464I CTTAAG 1 cut(s) 472
VpaK11BI GGWCC 4 cut(s) 29, 355, 360, 398
XapI RAATTY 2 cut(s) 755, 1030
XcmI CCANNNNNNNNNTGG 1 cut(s) 392
XspI CTAG 2 cut(s) 8, 864
ZraI GACGTC 1 cut(s) 269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.