Rw4G015220

ECERIFERUM 26-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Forward (+)
34983422 .. 34986339
2918 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G015220.1

Sequence Viewer

Length: 1293 bp
ATGGTTTTAGCCAAGGAAGATAACTTGGTCTATGGCTTCAAGCTTTCCTCGGTTGGGGCGGGGAAGATTACGGAGCCAAATACGGTTCATGAACCAAGTGGCATAGACTTGGCTATGAAGCTCCACTACCTAAGAGGAGTCTACTTCTTCAGTAGTGAGGCAGCCGAAGGGCTAACCGTCTTGAACATAAAGGAAGTCATGTTCGACTGGTTGTGTGCACACTTTCGGGAAATGGGCCGGTTCCGGAGGTCAGAATCCTCCGGGCGGCCGTATGTTAAGTGTAACGACTGTGGGGCGAGGTTCATTGAGGCTCAGTCTGATAAGACCCTTGAAGAATGGTTAGGGATGGACTGGTCTCTCCACAAGCTACTTGTTTCTAACCAAATCATTGGCCCTGAGCTGTTCTTCTCTCCTCCTGTTCTCTTCCAGTGGACCCGTTTTAAGTGCGGAGGAGTGTCAGTAGGGCTTAGCTGGGCCCATGTTCTGGGAGATGCAATAGCTGCTTCAGAGTACTTCCTCAATGGCTTGAGTCGAACCATGGCTGGTAAGGAGCCTTCTAGGCTACCTTACTCGGAAACATCCAAAACAAATATTCAGAAACGTGAAGGGTCTTCACCACGAGCCCTAAAACAAGTAGAATCGGTTGGTGACCACTGGATCACACCTAATAACCACAAGATGGAAACATTCTCGTTCACCATCACTTCCACCCAGCTAAACAGCTTGAAGCTCAAGTTACTGGGTCAGAATCCAAACCCAGCTGAAGAAATCCCAACTTTCGAGCTCATTTGTGGCGTAATTTGGCAATGTGTAGCCAAAGTGAGAGAAGGGTCGGAGCCAAAATTGGTGACAATCTGCAGAAATGGTACTAAACATGCAGCTCAGGGATATGGCAATTGTCAGATAATAAGCACAGTCGAGGCTGCAGATGTTGCGGATGTGGATCCGAAAAGTTTAGCAGTAATGCTGGCTAAGCGTTACGAGAGTGACGAGCAATCCCTCATCGGAGAAGTGGTGGACAGAGATGATGGAGTGTCGGATTATATTGTGTACGGGGCGAACTTGACATTTGTGAACTGGGAAGATGCAGATTTCTATGGGTTTGAAGCTGATGGACATAAGCCAGTTTGTGTGAATTACAGCATACAAGGTGTTGGTGATGAAGGAGCTATTTTGGTTCTGCCAGGGCCAAATGGTGAAGGAAGAGTGGTGAATGTTATTCTGGCAGAAAAAGAAGTTTTGGGGTTGAAAGCTGAGTTGAGAAAGAGTGATCTTATGGTTGAGATCAATTAG

Protein Analysis

430

Amino Acids

47.53

Weight (kDa)

5.29

Isoelectric Point (pI)

30.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 36 - 417 1.1e-29 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 484, 679
AccI GTMKAC 1 cut(s) 141
AccIII TCCGGA 1 cut(s) 243
AciI CCGC 4 cut(s) 59, 265, 447, 935
AclWI GGATC 3 cut(s) 665, 938, 951
AcoI YGGCCR 1 cut(s) 266
AcuI CTGAAG 3 cut(s) 133, 489, 783
AfaI GTAC 3 cut(s) 512, 868, 1052
AfiI CCNNNNNNNGG 4 cut(s) 54, 264, 484, 679
AgsI TTSAA 6 cut(s) 40, 184, 332, 727, 1106, 1249
AjnI CCWGG 1 cut(s) 1183
AloI GAACNNNNNNTCC 2 cut(s) 185, 217
Alw21I GWGCWC 2 cut(s) 220, 786
Alw26I GTCTC 1 cut(s) 360
Alw44I GTGCAC 1 cut(s) 216
AlwI GGATC 3 cut(s) 665, 938, 951
Aor13HI TCCGGA 1 cut(s) 243
AoxI GGCC 5 cut(s) 235, 266, 391, 474, 1187
ApaI GGGCCC 1 cut(s) 478
ApaLI GTGCAC 1 cut(s) 216
ApeKI GCWGC 4 cut(s) 161, 500, 878, 923
AspS9I GGNCC 6 cut(s) 235, 392, 432, 474, 475, 1187
AsuC2I CCSGG 1 cut(s) 262
AsuHPI GGTGA 7 cut(s) 606, 659, 688, 859, 1169, 1208, 1222
AvaII GGWCC 1 cut(s) 432
BaeGI GKGCMC 2 cut(s) 220, 478
BamHI GGATCC 1 cut(s) 943
BanII GRGCYC 3 cut(s) 478, 625, 786
BarI GAAGNNNNNNTAC 4 cut(s) 110, 142, 538, 570
BauI CACGAG 1 cut(s) 618
BbsI GAAGAC 1 cut(s) 603
Bbv12I GWGCWC 2 cut(s) 220, 786
BbvI GCAGC 4 cut(s) 173, 487, 890, 910
BccI CCATC 5 cut(s) 340, 673, 707, 1022, 1106
BceAI ACGGC 1 cut(s) 253
BciT130I CCWGG 1 cut(s) 1185
BcnI CCSGG 1 cut(s) 262
BcoDI GTCTC 1 cut(s) 360
BfaI CTAG 1 cut(s) 558
BfmI CTRYAG 2 cut(s) 856, 924
BglI GCCNNNNNGGC 1 cut(s) 559
BisI GCNGC 5 cut(s) 162, 266, 501, 879, 924
BlpI GCTNAGC 2 cut(s) 467, 972
BlsI GCNGC 5 cut(s) 163, 267, 502, 880, 925
BmcAI AGTACT 1 cut(s) 512
Bme1390I CCNGG 2 cut(s) 262, 1185
Bme18I GGWCC 1 cut(s) 432
BmgT120I GGNCC 6 cut(s) 235, 392, 432, 474, 475, 1187
BmiI GGNNCC 7 cut(s) 75, 242, 434, 476, 552, 837, 945
BmrFI CCNGG 2 cut(s) 262, 1185
BmrI ACTGGG 2 cut(s) 749, 1087
BmsI GCATC 2 cut(s) 481, 1075
BmuI ACTGGG 2 cut(s) 749, 1087
BpiI GAAGAC 1 cut(s) 603
Bpu10I CCTNAGC 2 cut(s) 396, 882
Bpu1102I GCTNAGC 2 cut(s) 467, 972
BpuEI CTTGAG 2 cut(s) 547, 716
BpuMI CCSGG 1 cut(s) 262
BsaBI GATNNNNATC 1 cut(s) 942
BsaI GGTCTC 1 cut(s) 360
BsaJI CCNNGG 4 cut(s) 12, 48, 537, 1184
BsaWI WCCGGW 1 cut(s) 243
BsaXI ACNNNNNCTCC 4 cut(s) 444, 474, 999, 1029
Bsc4I CCNNNNNNNGG 4 cut(s) 54, 264, 484, 679
Bse118I RCCGGY 1 cut(s) 237
Bse1I ACTGG 7 cut(s) 212, 356, 427, 659, 744, 1082, 1124
Bse3DI GCAATG 1 cut(s) 812
Bse8I GATNNNNATC 1 cut(s) 942
BseAI TCCGGA 1 cut(s) 243
BseBI CCWGG 1 cut(s) 1185
BseDI CCNNGG 4 cut(s) 12, 48, 537, 1184
BseGI GGATG 3 cut(s) 351, 578, 943
BseJI GATNNNNATC 1 cut(s) 942
BseLI CCNNNNNNNGG 4 cut(s) 54, 264, 484, 679
BseMI GCAATG 1 cut(s) 812
BseMII CTCAG 4 cut(s) 326, 387, 896, 1245
BseNI ACTGG 7 cut(s) 212, 356, 427, 659, 744, 1082, 1124
BseRI GAGGAG 3 cut(s) 150, 402, 465
BseSI GKGCMC 2 cut(s) 220, 478
BseX3I CGGCCG 1 cut(s) 266
BseXI GCAGC 4 cut(s) 173, 487, 890, 910
BseYI CCCAGC 3 cut(s) 471, 711, 757
Bsh1285I CGRYCG 1 cut(s) 269
BshFI GGCC 5 cut(s) 237, 268, 393, 476, 1189
BsiEI CGRYCG 1 cut(s) 269
BsiHKAI GWGCWC 2 cut(s) 220, 786
BsiSI CCGG 3 cut(s) 238, 244, 261
BslI CCNNNNNNNGG 4 cut(s) 54, 264, 484, 679
BsmAI GTCTC 1 cut(s) 360
BsnI GGCC 5 cut(s) 237, 268, 393, 476, 1189
Bso31I GGTCTC 1 cut(s) 360
Bsp120I GGGCCC 1 cut(s) 474
Bsp1286I GDGCHC 4 cut(s) 220, 478, 625, 786
Bsp13I TCCGGA 1 cut(s) 243
Bsp143I GATC 4 cut(s) 657, 943, 1270, 1284
Bsp1720I GCTNAGC 2 cut(s) 467, 972
Bsp19I CCATGG 1 cut(s) 537
BspACI CCGC 4 cut(s) 59, 265, 447, 935
BspANI GGCC 5 cut(s) 237, 268, 393, 476, 1189
BspCNI CTCAG 4 cut(s) 325, 388, 895, 1246
BspEI TCCGGA 1 cut(s) 243
BspHI TCATGA 1 cut(s) 88
BspLI GGNNCC 7 cut(s) 75, 242, 434, 476, 552, 837, 945
BspMAI CTGCAG 2 cut(s) 860, 928
BspPI GGATC 3 cut(s) 665, 938, 951
BspTNI GGTCTC 1 cut(s) 360
BsrDI GCAATG 1 cut(s) 812
BsrFI RCCGGY 1 cut(s) 237
BsrI ACTGG 7 cut(s) 212, 356, 427, 659, 744, 1082, 1124
BssAI RCCGGY 1 cut(s) 237
BssECI CCNNGG 4 cut(s) 12, 48, 537, 1184
BssMI GATC 4 cut(s) 657, 943, 1270, 1284
BssSI CACGAG 1 cut(s) 618
BssT1I CCWWGG 2 cut(s) 12, 537
Bst2BI CACGAG 1 cut(s) 618
Bst2UI CCWGG 1 cut(s) 1185
Bst4CI ACNGT 4 cut(s) 85, 178, 290, 916
Bst6I CTCTTC 2 cut(s) 428, 1198
BstAPI GCANNNNNTGC 2 cut(s) 500, 932
BstC8I GCNNGC 1 cut(s) 969
BstDEI CTNAG 7 cut(s) 131, 312, 396, 467, 882, 972, 1254
BstDSI CCRYGG 1 cut(s) 537
BstEII GGTNACC 1 cut(s) 647
BstF5I GGATG 3 cut(s) 351, 578, 943
BstKTI GATC 4 cut(s) 660, 946, 1273, 1287
BstMAI GTCTC 1 cut(s) 360
BstMBI GATC 4 cut(s) 657, 943, 1270, 1284
BstMCI CGRYCG 1 cut(s) 269
BstMWI GCNNNNNNNGC 4 cut(s) 500, 559, 932, 973
BstNI CCWGG 1 cut(s) 1185
BstNSI RCATGY 1 cut(s) 878
BstPI GGTNACC 1 cut(s) 647
BstSCI CCNGG 2 cut(s) 260, 1183
BstSFI CTRYAG 2 cut(s) 856, 924
BstSLI GKGCMC 2 cut(s) 220, 478
BstV1I GCAGC 4 cut(s) 173, 487, 890, 910
BstV2I GAAGAC 1 cut(s) 603
BstX2I RGATCY 1 cut(s) 943
BstXI CCANNNNNNTGG 1 cut(s) 389
BstYI RGATCY 1 cut(s) 943
BstZI CGGCCG 1 cut(s) 266
BsuRI GGCC 5 cut(s) 237, 268, 393, 476, 1189
BtgI CCRYGG 1 cut(s) 537
BtsCI GGATG 3 cut(s) 351, 578, 943
BtsIMutI CAGTG 2 cut(s) 434, 652
Cac8I GCNNGC 1 cut(s) 969
CciI TCATGA 1 cut(s) 88
Cfr10I RCCGGY 1 cut(s) 237
Cfr13I GGNCC 6 cut(s) 235, 392, 432, 474, 475, 1187
Csp6I GTAC 3 cut(s) 511, 867, 1051
CviAII CATG 5 cut(s) 89, 199, 479, 538, 875
CviQI GTAC 3 cut(s) 511, 867, 1051
DdeI CTNAG 7 cut(s) 131, 312, 396, 467, 882, 972, 1254
DpnI GATC 4 cut(s) 659, 945, 1272, 1286
DpnII GATC 4 cut(s) 657, 943, 1270, 1284
EaeI YGGCCR 1 cut(s) 266
EagI CGGCCG 1 cut(s) 266
Eam1104I CTCTTC 2 cut(s) 428, 1198
EarI CTCTTC 2 cut(s) 428, 1198
Ecl136II GAGCTC 1 cut(s) 784
EclXI CGGCCG 1 cut(s) 266
Eco130I CCWWGG 2 cut(s) 12, 537
Eco24I GRGCYC 3 cut(s) 478, 625, 786
Eco31I GGTCTC 1 cut(s) 360
Eco47I GGWCC 1 cut(s) 432
Eco52I CGGCCG 1 cut(s) 266
Eco53kI GAGCTC 1 cut(s) 784
Eco57I CTGAAG 3 cut(s) 133, 489, 783
Eco91I GGTNACC 1 cut(s) 647
EcoICRI GAGCTC 1 cut(s) 784
EcoO65I GGTNACC 1 cut(s) 647
EcoRII CCWGG 1 cut(s) 1183
EcoT14I CCWWGG 2 cut(s) 12, 537
EcoT38I GRGCYC 3 cut(s) 478, 625, 786
ErhI CCWWGG 2 cut(s) 12, 537
FaeI CATG 5 cut(s) 92, 202, 482, 541, 878
FatI CATG 5 cut(s) 88, 198, 478, 537, 874
FauI CCCGC 1 cut(s) 52
FblI GTMKAC 1 cut(s) 141
Fnu4HI GCNGC 5 cut(s) 162, 266, 501, 879, 924
FokI GGATG 3 cut(s) 358, 565, 950
FriOI GRGCYC 3 cut(s) 478, 625, 786
Fsp4HI GCNGC 5 cut(s) 162, 266, 501, 879, 924
FspBI CTAG 1 cut(s) 558
GluI GCNGC 5 cut(s) 162, 266, 501, 879, 924
GsaI CCCAGC 3 cut(s) 475, 715, 761
HaeIII GGCC 5 cut(s) 237, 268, 393, 476, 1189
HapII CCGG 3 cut(s) 238, 244, 261
Hin1II CATG 5 cut(s) 92, 202, 482, 541, 878
HindIII AAGCTT 1 cut(s) 41
HinfI GANTC 5 cut(s) 138, 254, 529, 638, 748
HpaII CCGG 3 cut(s) 238, 244, 261
HphI GGTGA 7 cut(s) 606, 659, 688, 859, 1169, 1208, 1222
Hpy166II GTNNAC 7 cut(s) 142, 218, 432, 696, 1018, 1051, 1075
Hpy188III TCNNGA 4 cut(s) 89, 181, 227, 244
Hpy8I GTNNAC 7 cut(s) 142, 218, 432, 696, 1018, 1051, 1075
HpyAV CCTTC 6 cut(s) 161, 564, 599, 821, 1157, 1193
HpyCH4III ACNGT 4 cut(s) 85, 178, 290, 916
HpyCH4IV ACGT 1 cut(s) 601
HpyCH4V TGCA 6 cut(s) 218, 494, 858, 878, 926, 1088
HpyF10VI GCNNNNNNNGC 4 cut(s) 500, 559, 932, 973
HpyF3I CTNAG 7 cut(s) 131, 312, 396, 467, 882, 972, 1254
HpySE526I ACGT 1 cut(s) 601
Hsp92II CATG 5 cut(s) 92, 202, 482, 541, 878
Kpn2I TCCGGA 1 cut(s) 243
Kzo9I GATC 4 cut(s) 657, 943, 1270, 1284
LmnI GCTCC 5 cut(s) 73, 126, 550, 835, 1166
Lsp1109I GCAGC 4 cut(s) 173, 487, 890, 910
LweI GCATC 2 cut(s) 481, 1075
MaeI CTAG 1 cut(s) 558
MaeII ACGT 1 cut(s) 601
MaeIII GTNAC 6 cut(s) 281, 647, 735, 847, 977, 986
MalI GATC 4 cut(s) 659, 945, 1272, 1286
MboI GATC 4 cut(s) 657, 943, 1270, 1284
MfeI CAATTG 1 cut(s) 895
MflI RGATCY 1 cut(s) 943
MhlI GDGCHC 4 cut(s) 220, 478, 625, 786
MluCI AATT 5 cut(s) 798, 842, 895, 1135, 1288
MlyI GAGTC 2 cut(s) 147, 538
MmeI TCCRAC 2 cut(s) 813, 1017
MroI TCCGGA 1 cut(s) 243
MseI TTAA 2 cut(s) 276, 441
MspA1I CMGCKG 1 cut(s) 761
MspI CCGG 3 cut(s) 238, 244, 261
MspR9I CCNGG 2 cut(s) 262, 1185
MunI CAATTG 1 cut(s) 895
MvaI CCWGG 1 cut(s) 1185
MwoI GCNNNNNNNGC 4 cut(s) 500, 559, 932, 973
NciI CCSGG 1 cut(s) 262
NcoI CCATGG 1 cut(s) 537
NdeII GATC 4 cut(s) 657, 943, 1270, 1284
NlaIII CATG 5 cut(s) 92, 202, 482, 541, 878
NlaIV GGNNCC 7 cut(s) 75, 242, 434, 476, 552, 837, 945
NmuCI GTSAC 3 cut(s) 647, 847, 986
NspI RCATGY 1 cut(s) 878
PagI TCATGA 1 cut(s) 88
PcsI WCGNNNNNNNCGW 1 cut(s) 987
PfeI GAWTC 3 cut(s) 254, 638, 748
PflMI CCANNNNNTGG 2 cut(s) 484, 679
PkrI GCNGC 5 cut(s) 163, 267, 502, 880, 925
PleI GAGTC 2 cut(s) 146, 537
PpsI GAGTC 2 cut(s) 146, 537
Psp124BI GAGCTC 1 cut(s) 786
Psp6I CCWGG 1 cut(s) 1183
PspEI GGTNACC 1 cut(s) 647
PspFI CCCAGC 3 cut(s) 471, 711, 757
PspGI CCWGG 1 cut(s) 1183
PspN4I GGNNCC 7 cut(s) 75, 242, 434, 476, 552, 837, 945
PspOMI GGGCCC 1 cut(s) 474
PspPI GGNCC 6 cut(s) 235, 392, 432, 474, 475, 1187
PstI CTGCAG 2 cut(s) 860, 928
PsuI RGATCY 1 cut(s) 943
PvuII CAGCTG 1 cut(s) 761
RsaI GTAC 3 cut(s) 512, 868, 1052
RsaNI GTAC 3 cut(s) 511, 867, 1051
SacI GAGCTC 1 cut(s) 786
SaqAI TTAA 2 cut(s) 276, 441
SatI GCNGC 5 cut(s) 162, 266, 501, 879, 924
Sau3AI GATC 4 cut(s) 657, 943, 1270, 1284
Sau96I GGNCC 6 cut(s) 235, 392, 432, 474, 475, 1187
ScaI AGTACT 1 cut(s) 512
SchI GAGTC 2 cut(s) 147, 538
ScrFI CCNGG 2 cut(s) 262, 1185
SduI GDGCHC 4 cut(s) 220, 478, 625, 786
SfaNI GCATC 2 cut(s) 481, 1075
SfcI CTRYAG 2 cut(s) 856, 924
SinI GGWCC 1 cut(s) 432
SmlI CTYRAG 2 cut(s) 526, 731
SmoI CTYRAG 2 cut(s) 526, 731
Sse9I AATT 5 cut(s) 798, 842, 895, 1135, 1288
SsiI CCGC 4 cut(s) 59, 265, 447, 935
SspI AATATT 1 cut(s) 592
SspMI CTAG 1 cut(s) 558
SstI GAGCTC 1 cut(s) 786
StyD4I CCNGG 2 cut(s) 260, 1183
StyI CCWWGG 2 cut(s) 12, 537
TaaI ACNGT 4 cut(s) 85, 178, 290, 916
TaiI ACGT 1 cut(s) 604
TaqI TCGA 4 cut(s) 204, 532, 780, 918
TasI AATT 5 cut(s) 798, 842, 895, 1135, 1288
TatI WGTACW 1 cut(s) 510
TauI GCSGC 1 cut(s) 268
TfiI GAWTC 3 cut(s) 254, 638, 748
Tru1I TTAA 2 cut(s) 276, 441
Tru9I TTAA 2 cut(s) 276, 441
TscAI CASTG 2 cut(s) 434, 659
TseFI GTSAC 3 cut(s) 647, 847, 986
TseI GCWGC 4 cut(s) 161, 500, 878, 923
Tsp45I GTSAC 3 cut(s) 647, 847, 986
TspDTI ATGAA 5 cut(s) 77, 105, 131, 292, 1176
TspGWI ACGGA 1 cut(s) 86
TspRI CASTG 2 cut(s) 434, 659
Van91I CCANNNNNTGG 2 cut(s) 484, 679
VneI GTGCAC 1 cut(s) 216
VpaK11BI GGWCC 1 cut(s) 432
XceI RCATGY 1 cut(s) 878
XmiI GTMKAC 1 cut(s) 141
XspI CTAG 1 cut(s) 558
ZrmI AGTACT 1 cut(s) 512
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.