FvH4_4g13360

ECERIFERUM 26-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
16972556 .. 16974847
2292 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g13360.t1

Sequence Viewer

Length: 1287 bp
ATGGTTTTAGCCAAGGAAGACAGCTTGGTCTATGGCTTCAAGCTTTCCTCGGTTGGGTCGGGGAAGATTACGCCGGCGGATACGGTTCACGTGCCAAGTGGCATGGACTTGGCTATGAAGCTCCACTACCTAAGAGGAGTCTACTTCTTCAGTAGTGAGGCAGCCGAAGGGCTAAGCGTCCTGAAAATAAAGGAAACCATCTTCGTCTGGTTGATTGAACACTGGCGGGTGTTGGGCCGGTTCCGGAGGTCGGAATCCTCCGGACGGCCCTTTGTTAAGTGTAACGACTGCGGGGCGAGGTTCATTGAGGCTCAGTCTGATAAGACCCTTGAAGAATGGCTAGGGATGGACTCGTCTATCCACAAGCTGCTTGCTTCTAACCAAATCATTGGCCCTGAGCTGTTCTTCTCTCCTCCTGTTCTCTTCCAGTGGACTCGTTTTAAGTGCGGAGGAGTGTCAATAGGGCTTAGCTGGTCCCATATTCTGGGAGATGCCATGGCTGCTTCAGAGTACTTCTTCAATGGCTTGAGTCGAACCATGACTGGTAAGGAGCCTTCACCTTACCCGGAAACATCAAAACCAAATATTCATCAACTCAAGCACCCTTCACCACTAGCCCTAAAAAAAGTGGATTCAGTTGGTGACCACTGGATCACACCCAACAACCACAAGATGGAAACATTCTCGTTGGTCCTCACTCCCACCCAGCTAAACAGCTTGGAGCTCAAGTTACTGGGTCAGAATCCAAACCCAGCTGAAGAAATCCCAACTTTCGAGCTCATTTGTGGTGTTATTTGGCAATGTGTGGCAAAAATGAGACAAGGGTCGGAGCCGAAATTAGTCACAATCTGCACAAAAGGTACTAAACCTGCAGTTGCGGAATGCGGCAACAATCAGATTATAAGCACAGTCGAGGCTGCAGATGTTGCCGATATGGATCCGAAAAGTTTAGCAGCAATGCTGGCTAAGCGCGAGAGTTACGAGGAAACACAGATAGGAGAATTGGTGGAGAGCGAGAATGGAGCGTCGGATTATATTGTGTACGGGGCGAACTTGACATTTGTGAACTGGGAAGGTTCAGACTTCTATGGGTTTGAAGCTGAGGGACATAAGCCAGTTTGTGTGAATTACAGCATACAAGGTGTTGGTGATGAAGGAGCTGTTTTGGTTCAGCCAGGACCAAATGGTGAAGGAAGACTGGTGAATGTTATTTTCCCAGAGAAAGAAGTTGTGGGGTTGAAAGCTGAGTTGAGAAAGAATGATCTTATGCTTGAGATCAATAATTAG

Protein Analysis

429

Amino Acids

47.16

Weight (kDa)

5.42

Isoelectric Point (pI)

37.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 35 - 277 8e-25 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 902
AasI GACNNNNNNGTC 1 cut(s) 26
Acc36I ACCTGC 1 cut(s) 877
AccB7I CCANNNNNTGG 2 cut(s) 484, 673
AccI GTMKAC 1 cut(s) 141
AccII CGCG 1 cut(s) 972
AccIII TCCGGA 2 cut(s) 243, 260
AciI CCGC 6 cut(s) 77, 226, 291, 447, 878, 885
AclWI GGATC 3 cut(s) 659, 932, 945
AcuI CTGAAG 3 cut(s) 133, 489, 777
AcvI CACGTG 1 cut(s) 91
AfaI GTAC 3 cut(s) 512, 862, 1043
AfiI CCNNNNNNNGG 5 cut(s) 54, 250, 264, 484, 673
AgsI TTSAA 6 cut(s) 40, 218, 332, 520, 1097, 1240
AjnI CCWGG 1 cut(s) 1174
Alw21I GWGCWC 2 cut(s) 726, 780
Alw26I GTCTC 1 cut(s) 811
AlwI GGATC 3 cut(s) 659, 932, 945
Aor13HI TCCGGA 2 cut(s) 243, 260
AoxI GGCC 3 cut(s) 235, 266, 391
ApeKI GCWGC 5 cut(s) 161, 367, 500, 917, 953
AspLEI GCGC 1 cut(s) 972
AspS9I GGNCC 6 cut(s) 235, 267, 392, 474, 691, 1178
AsuC2I CCSGG 1 cut(s) 566
AsuHPI GGTGA 6 cut(s) 549, 600, 653, 1160, 1199, 1213
AvaII GGWCC 3 cut(s) 474, 691, 1178
BamHI GGATCC 1 cut(s) 937
BanII GRGCYC 2 cut(s) 726, 780
BarI GAAGNNNNNNTAC 4 cut(s) 110, 142, 538, 570
BbrPI CACGTG 1 cut(s) 91
BbsI GAAGAC 2 cut(s) 24, 1201
Bbv12I GWGCWC 2 cut(s) 726, 780
BbvCI CCTCAGC 1 cut(s) 1101
BbvI GCAGC 5 cut(s) 173, 354, 487, 904, 965
BccI CCATC 3 cut(s) 206, 340, 667
BceAI ACGGC 1 cut(s) 281
BciT130I CCWGG 1 cut(s) 1176
BciVI GTATCC 1 cut(s) 73
BcnI CCSGG 1 cut(s) 566
BcoDI GTCTC 1 cut(s) 811
BfaI CTAG 2 cut(s) 341, 614
BfmI CTRYAG 2 cut(s) 870, 918
BfuAI ACCTGC 1 cut(s) 877
BfuI GTATCC 1 cut(s) 73
BisI GCNGC 6 cut(s) 162, 368, 501, 886, 918, 954
BlpI GCTNAGC 3 cut(s) 173, 467, 966
BlsI GCNGC 6 cut(s) 163, 369, 502, 887, 919, 955
BmcAI AGTACT 1 cut(s) 512
Bme1390I CCNGG 2 cut(s) 566, 1176
Bme18I GGWCC 3 cut(s) 474, 691, 1178
BmgT120I GGNCC 6 cut(s) 235, 267, 392, 474, 691, 1178
BmiI GGNNCC 5 cut(s) 242, 476, 552, 831, 939
BmrFI CCNGG 2 cut(s) 566, 1176
BmrI ACTGGG 2 cut(s) 743, 1078
BmsI GCATC 1 cut(s) 481
BmuI ACTGGG 2 cut(s) 743, 1078
BoxI GACNNNNGTC 1 cut(s) 823
BpiI GAAGAC 2 cut(s) 24, 1201
Bpu10I CCTNAGC 2 cut(s) 396, 1101
Bpu1102I GCTNAGC 3 cut(s) 173, 467, 966
BpuEI CTTGAG 3 cut(s) 547, 581, 710
BpuMI CCSGG 1 cut(s) 566
BsaAI YACGTR 1 cut(s) 91
BsaBI GATNNNNATC 1 cut(s) 936
BsaJI CCNNGG 3 cut(s) 12, 48, 495
BsaWI WCCGGW 2 cut(s) 243, 260
BsaXI ACNNNNNCTCC 4 cut(s) 713, 743, 990, 1020
Bsc4I CCNNNNNNNGG 5 cut(s) 54, 250, 264, 484, 673
Bse118I RCCGGY 2 cut(s) 73, 237
Bse1I ACTGG 8 cut(s) 227, 427, 547, 653, 738, 1073, 1115, 1203
Bse3DI GCAATG 2 cut(s) 806, 963
Bse8I GATNNNNATC 1 cut(s) 936
BseAI TCCGGA 2 cut(s) 243, 260
BseBI CCWGG 1 cut(s) 1176
BseDI CCNNGG 3 cut(s) 12, 48, 495
BseGI GGATG 1 cut(s) 351
BseJI GATNNNNATC 1 cut(s) 936
BseLI CCNNNNNNNGG 5 cut(s) 54, 250, 264, 484, 673
BseMI GCAATG 2 cut(s) 806, 963
BseMII CTCAG 4 cut(s) 326, 387, 1092, 1236
BseNI ACTGG 8 cut(s) 227, 427, 547, 653, 738, 1073, 1115, 1203
BseRI GAGGAG 3 cut(s) 150, 402, 465
BseXI GCAGC 5 cut(s) 173, 354, 487, 904, 965
BseYI CCCAGC 2 cut(s) 705, 751
BsgI GTGCAG 1 cut(s) 835
Bsh1236I CGCG 1 cut(s) 972
BshFI GGCC 3 cut(s) 237, 268, 393
BsiHKAI GWGCWC 2 cut(s) 726, 780
BsiSI CCGG 5 cut(s) 74, 238, 244, 261, 566
BslFI GGGAC 2 cut(s) 460, 1119
BslI CCNNNNNNNGG 5 cut(s) 54, 250, 264, 484, 673
BsmAI GTCTC 1 cut(s) 811
BsmFI GGGAC 2 cut(s) 460, 1119
BsmI GAATGC 1 cut(s) 887
BsnI GGCC 3 cut(s) 237, 268, 393
Bsp1286I GDGCHC 2 cut(s) 726, 780
Bsp13I TCCGGA 2 cut(s) 243, 260
Bsp143I GATC 4 cut(s) 651, 937, 1261, 1275
Bsp1720I GCTNAGC 3 cut(s) 173, 467, 966
Bsp19I CCATGG 1 cut(s) 495
BspACI CCGC 6 cut(s) 77, 226, 291, 447, 878, 885
BspANI GGCC 3 cut(s) 237, 268, 393
BspCNI CTCAG 4 cut(s) 325, 388, 1093, 1237
BspEI TCCGGA 2 cut(s) 243, 260
BspFNI CGCG 1 cut(s) 972
BspLI GGNNCC 5 cut(s) 242, 476, 552, 831, 939
BspMAI CTGCAG 2 cut(s) 874, 922
BspMI ACCTGC 1 cut(s) 877
BspPI GGATC 3 cut(s) 659, 932, 945
BsrDI GCAATG 2 cut(s) 806, 963
BsrFI RCCGGY 2 cut(s) 73, 237
BsrI ACTGG 8 cut(s) 227, 427, 547, 653, 738, 1073, 1115, 1203
BssAI RCCGGY 2 cut(s) 73, 237
BssECI CCNNGG 3 cut(s) 12, 48, 495
BssMI GATC 4 cut(s) 651, 937, 1261, 1275
BssT1I CCWWGG 2 cut(s) 12, 495
Bst2UI CCWGG 1 cut(s) 1176
Bst4CI ACNGT 2 cut(s) 85, 910
Bst6I CTCTTC 1 cut(s) 428
BstAPI GCANNNNNTGC 1 cut(s) 926
BstBAI YACGTR 1 cut(s) 91
BstC8I GCNNGC 3 cut(s) 75, 372, 963
BstDEI CTNAG 8 cut(s) 131, 173, 312, 396, 467, 966, 1101, 1245
BstDSI CCRYGG 1 cut(s) 495
BstEII GGTNACC 1 cut(s) 641
BstF5I GGATG 1 cut(s) 351
BstFNI CGCG 1 cut(s) 972
BstHHI GCGC 1 cut(s) 972
BstKTI GATC 4 cut(s) 654, 940, 1264, 1278
BstMAI GTCTC 1 cut(s) 811
BstMBI GATC 4 cut(s) 651, 937, 1261, 1275
BstMWI GCNNNNNNNGC 4 cut(s) 500, 926, 962, 967
BstNI CCWGG 1 cut(s) 1176
BstPAI GACNNNNGTC 1 cut(s) 823
BstPI GGTNACC 1 cut(s) 641
BstSCI CCNGG 2 cut(s) 564, 1174
BstSFI CTRYAG 2 cut(s) 870, 918
BstUI CGCG 1 cut(s) 972
BstV1I GCAGC 5 cut(s) 173, 354, 487, 904, 965
BstV2I GAAGAC 2 cut(s) 24, 1201
BstX2I RGATCY 1 cut(s) 937
BstXI CCANNNNNNTGG 1 cut(s) 389
BstYI RGATCY 1 cut(s) 937
BsuI GTATCC 1 cut(s) 73
BsuRI GGCC 3 cut(s) 237, 268, 393
BtgI CCRYGG 1 cut(s) 495
BtsCI GGATG 1 cut(s) 351
BtsIMutI CAGTG 3 cut(s) 220, 434, 646
BveI ACCTGC 1 cut(s) 877
Cac8I GCNNGC 3 cut(s) 75, 372, 963
CfoI GCGC 1 cut(s) 972
Cfr10I RCCGGY 2 cut(s) 73, 237
Cfr13I GGNCC 6 cut(s) 235, 267, 392, 474, 691, 1178
CseI GACGC 2 cut(s) 166, 1014
Csp6I GTAC 3 cut(s) 511, 861, 1042
CviAII CATG 3 cut(s) 103, 496, 538
CviQI GTAC 3 cut(s) 511, 861, 1042
DdeI CTNAG 8 cut(s) 131, 173, 312, 396, 467, 966, 1101, 1245
DpnI GATC 4 cut(s) 653, 939, 1263, 1277
DpnII GATC 4 cut(s) 651, 937, 1261, 1275
DrdI GACNNNNNNGTC 1 cut(s) 26
DseDI GACNNNNNNGTC 1 cut(s) 26
Eam1104I CTCTTC 1 cut(s) 428
EarI CTCTTC 1 cut(s) 428
EciI GGCGGA 1 cut(s) 92
Ecl136II GAGCTC 2 cut(s) 724, 778
Eco130I CCWWGG 2 cut(s) 12, 495
Eco24I GRGCYC 2 cut(s) 726, 780
Eco47I GGWCC 3 cut(s) 474, 691, 1178
Eco53kI GAGCTC 2 cut(s) 724, 778
Eco57I CTGAAG 3 cut(s) 133, 489, 777
Eco72I CACGTG 1 cut(s) 91
Eco91I GGTNACC 1 cut(s) 641
EcoICRI GAGCTC 2 cut(s) 724, 778
EcoO65I GGTNACC 1 cut(s) 641
EcoRII CCWGG 1 cut(s) 1174
EcoT14I CCWWGG 2 cut(s) 12, 495
EcoT38I GRGCYC 2 cut(s) 726, 780
ErhI CCWWGG 2 cut(s) 12, 495
FaeI CATG 3 cut(s) 106, 499, 541
FaqI GGGAC 2 cut(s) 460, 1119
FatI CATG 3 cut(s) 102, 495, 537
FauI CCCGC 2 cut(s) 219, 284
FblI GTMKAC 1 cut(s) 141
Fnu4HI GCNGC 6 cut(s) 162, 368, 501, 886, 918, 954
FokI GGATG 1 cut(s) 358
FriOI GRGCYC 2 cut(s) 726, 780
Fsp4HI GCNGC 6 cut(s) 162, 368, 501, 886, 918, 954
FspBI CTAG 2 cut(s) 341, 614
GlaI GCGC 1 cut(s) 971
GluI GCNGC 6 cut(s) 162, 368, 501, 886, 918, 954
GsaI CCCAGC 2 cut(s) 709, 755
HaeIII GGCC 3 cut(s) 237, 268, 393
HapII CCGG 5 cut(s) 74, 238, 244, 261, 566
HgaI GACGC 2 cut(s) 166, 1014
HhaI GCGC 1 cut(s) 972
Hin1II CATG 3 cut(s) 106, 499, 541
Hin6I GCGC 1 cut(s) 970
HinP1I GCGC 1 cut(s) 970
HindIII AAGCTT 1 cut(s) 41
HinfI GANTC 7 cut(s) 138, 254, 350, 433, 529, 632, 742
HpaII CCGG 5 cut(s) 74, 238, 244, 261, 566
HphI GGTGA 6 cut(s) 549, 600, 653, 1160, 1199, 1213
Hpy166II GTNNAC 5 cut(s) 88, 142, 432, 1042, 1066
Hpy188I TCNGA 9 cut(s) 253, 319, 508, 741, 829, 897, 942, 1030, 1081
Hpy188III TCNNGA 3 cut(s) 181, 244, 261
Hpy8I GTNNAC 5 cut(s) 88, 142, 432, 1042, 1066
Hpy99I CGWCG 1 cut(s) 1030
HpyAV CCTTC 6 cut(s) 161, 564, 615, 1067, 1148, 1184
HpyCH4III ACNGT 2 cut(s) 85, 910
HpyCH4IV ACGT 1 cut(s) 90
HpyCH4V TGCA 3 cut(s) 852, 872, 920
HpyF10VI GCNNNNNNNGC 4 cut(s) 500, 926, 962, 967
HpyF3I CTNAG 8 cut(s) 131, 173, 312, 396, 467, 966, 1101, 1245
HpySE526I ACGT 1 cut(s) 90
Hsp92II CATG 3 cut(s) 106, 499, 541
HspAI GCGC 1 cut(s) 970
Kpn2I TCCGGA 2 cut(s) 243, 260
KroI GCCGGC 1 cut(s) 73
KroNI GCCGGC 1 cut(s) 75
Kzo9I GATC 4 cut(s) 651, 937, 1261, 1275
LmnI GCTCC 6 cut(s) 126, 550, 721, 829, 1022, 1157
Lsp1109I GCAGC 5 cut(s) 173, 354, 487, 904, 965
LweI GCATC 1 cut(s) 481
MaeI CTAG 2 cut(s) 341, 614
MaeII ACGT 1 cut(s) 90
MaeIII GTNAC 5 cut(s) 281, 641, 729, 841, 977
MalI GATC 4 cut(s) 653, 939, 1263, 1277
MboI GATC 4 cut(s) 651, 937, 1261, 1275
MflI RGATCY 1 cut(s) 937
MhlI GDGCHC 2 cut(s) 726, 780
MluCI AATT 4 cut(s) 836, 1001, 1126, 1282
MlyI GAGTC 4 cut(s) 147, 344, 427, 538
MmeI TCCRAC 3 cut(s) 231, 807, 1008
MreI CGCCGGCG 1 cut(s) 73
MroI TCCGGA 2 cut(s) 243, 260
MroNI GCCGGC 1 cut(s) 73
MseI TTAA 2 cut(s) 276, 441
MspA1I CMGCKG 1 cut(s) 755
MspI CCGG 5 cut(s) 74, 238, 244, 261, 566
MspR9I CCNGG 2 cut(s) 566, 1176
Mva1269I GAATGC 1 cut(s) 887
MvaI CCWGG 1 cut(s) 1176
MvnI CGCG 1 cut(s) 972
MwoI GCNNNNNNNGC 4 cut(s) 500, 926, 962, 967
NaeI GCCGGC 1 cut(s) 75
NciI CCSGG 1 cut(s) 566
NcoI CCATGG 1 cut(s) 495
NdeII GATC 4 cut(s) 651, 937, 1261, 1275
NgoMIV GCCGGC 1 cut(s) 73
NlaIII CATG 3 cut(s) 106, 499, 541
NlaIV GGNNCC 5 cut(s) 242, 476, 552, 831, 939
NmuCI GTSAC 2 cut(s) 641, 841
PctI GAATGC 1 cut(s) 887
PdiI GCCGGC 1 cut(s) 75
PfeI GAWTC 3 cut(s) 254, 632, 742
PflMI CCANNNNNTGG 2 cut(s) 484, 673
PkrI GCNGC 6 cut(s) 163, 369, 502, 887, 919, 955
PleI GAGTC 4 cut(s) 146, 344, 427, 537
PmaCI CACGTG 1 cut(s) 91
PmlI CACGTG 1 cut(s) 91
PpsI GAGTC 4 cut(s) 146, 344, 427, 537
Ppu21I YACGTR 1 cut(s) 91
PshAI GACNNNNGTC 1 cut(s) 823
PsiI TTATAA 1 cut(s) 902
Psp124BI GAGCTC 2 cut(s) 726, 780
Psp6I CCWGG 1 cut(s) 1174
PspCI CACGTG 1 cut(s) 91
PspEI GGTNACC 1 cut(s) 641
PspFI CCCAGC 2 cut(s) 705, 751
PspGI CCWGG 1 cut(s) 1174
PspN4I GGNNCC 5 cut(s) 242, 476, 552, 831, 939
PspPI GGNCC 6 cut(s) 235, 267, 392, 474, 691, 1178
PstI CTGCAG 2 cut(s) 874, 922
PsuI RGATCY 1 cut(s) 937
PvuII CAGCTG 1 cut(s) 755
RsaI GTAC 3 cut(s) 512, 862, 1043
RsaNI GTAC 3 cut(s) 511, 861, 1042
SacI GAGCTC 2 cut(s) 726, 780
SaqAI TTAA 2 cut(s) 276, 441
SatI GCNGC 6 cut(s) 162, 368, 501, 886, 918, 954
Sau3AI GATC 4 cut(s) 651, 937, 1261, 1275
Sau96I GGNCC 6 cut(s) 235, 267, 392, 474, 691, 1178
ScaI AGTACT 1 cut(s) 512
SchI GAGTC 4 cut(s) 147, 344, 427, 538
ScrFI CCNGG 2 cut(s) 566, 1176
SduI GDGCHC 2 cut(s) 726, 780
SfaNI GCATC 1 cut(s) 481
SfcI CTRYAG 2 cut(s) 870, 918
SgrAI CRCCGGYG 1 cut(s) 73
SinI GGWCC 3 cut(s) 474, 691, 1178
SmlI CTYRAG 4 cut(s) 526, 596, 725, 1271
SmoI CTYRAG 4 cut(s) 526, 596, 725, 1271
Sse9I AATT 4 cut(s) 836, 1001, 1126, 1282
SsiI CCGC 6 cut(s) 77, 226, 291, 447, 878, 885
SspI AATATT 1 cut(s) 586
SspMI CTAG 2 cut(s) 341, 614
SstI GAGCTC 2 cut(s) 726, 780
StyD4I CCNGG 2 cut(s) 564, 1174
StyI CCWWGG 2 cut(s) 12, 495
TaaI ACNGT 2 cut(s) 85, 910
TaiI ACGT 1 cut(s) 93
TaqI TCGA 3 cut(s) 532, 774, 912
TasI AATT 4 cut(s) 836, 1001, 1126, 1282
TatI WGTACW 1 cut(s) 510
TauI GCSGC 1 cut(s) 888
TfiI GAWTC 3 cut(s) 254, 632, 742
Tru1I TTAA 2 cut(s) 276, 441
Tru9I TTAA 2 cut(s) 276, 441
TscAI CASTG 3 cut(s) 227, 434, 653
TseFI GTSAC 2 cut(s) 641, 841
TseI GCWGC 5 cut(s) 161, 367, 500, 917, 953
Tsp45I GTSAC 2 cut(s) 641, 841
TspDTI ATGAA 4 cut(s) 131, 292, 578, 1167
TspRI CASTG 3 cut(s) 227, 434, 653
Van91I CCANNNNNTGG 2 cut(s) 484, 673
VpaK11BI GGWCC 3 cut(s) 474, 691, 1178
XmiI GTMKAC 1 cut(s) 141
XspI CTAG 2 cut(s) 341, 614
ZrmI AGTACT 1 cut(s) 512
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.