MD04G1016900.v1.1

ECERIFERUM 26-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Reverse (-)
1836830 .. 1839627
2798 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1016900.v1.1.491

Sequence Viewer

Length: 1317 bp
ATGGTCTTAGCCAGTCAAGAAAATTTGGTCTATGGCATTAAGCTTTCATCGGTCGGGCCAGCCAGGGTTACCGGTTCGGACGTGGTTCATAACCCGAGTGGCATGGACTTGGCTATGAAGCTTCACTACCTTAGAGGAGTCTACTTCTTTGATAGCCAGGCGGCCCAAGGCATGACCACTAACCGCATAAAGGAAGCTATGTTCACATGGTTATGTGTCAGCTACCGGACATGCGGCCGGTTTCGGAGATCCGAATCCGGCCGGCCCTATCTGAAGTGTAACGATTGCGGTGTGAGGTATCTTGAAGCGCAGTGTGATAAAACCCTCGATGAATGGCTAGGGTTGGACTGCTCTCTTCAGAAGCTGCTTGCTTCTAACCAAATCATTGGCCCTGAACTATTCTTCTCTCCAGTTGTTCTCTTCCAGGTTACTTATTTCAAATGTGGAGGAATATCACTAGGCCTCAGCTGGTCTCATGTCCTCGGAGATGCATTTGCAGCATCAGATTTCATCAACGGCTTAGGGCAAGTCATGTCTGGTCTGGAGATCAGCAAGCTACCAAATTATGCAAATCCGAACACAAATGTTCAACAAAAACTTGCAAAAAATCCATCACCACCACCACTCTCCATCAGACACGTGGACTCGGTTGGTGACTATTGGATAAGTCCCAATAATTGCAAGATGGAAACATTCTCGTTCCCTGTAACTGCCACGCAGCTAAACAACTTGCAAGTCAAGATATTAGGTCCAATTCAAAGTGACCAAATTCCAATTTTTGAACTTATTTGTGCCCTAATTTGGAAATGCATAGCCACAGTTAGAGAAGGGCCACAACCAAAATTGGTGACAATTTGCAAAAATGATACAAATAGGAGAACAGAAGGTGAATGCAGCAACAGTCAGACTATAAGCACAGTTGAGGCAGATTTTAGGGTTTCGGATATGGATCCAAAAGAACTAGCAAACTTGCTAGCCAAGCAAGCCGGCCAGAACGAGAAAACACGAATCGAAGAGGCCATAGAGAATGAGAATGGAGTAGCTGATTTTGTTGTGTATGGAGCCAACTTGACGTTTGTGAACTGGGAAGATGTTGATTTTTATGGGTTGGAAGTGAAGGGACATAAGCCGGTTTGCGTGCATTATAACATACAAGGTGTTGGTGATGAAGGAGCTGTTTTGTTGCTGCCTGCTGGGGCTAAAGAGTTTGGTGATGGAGGAAGAGTGGTGAGTGTTATTCTGCCAGAGAAAGAAGTGTTTGGGGTCAAATCTGAGTTGAGGAAAAATGATCTGCTGTTTGGTAATGAGCTTGAATGA

Protein Analysis

439

Amino Acids

48.35

Weight (kDa)

5.37

Isoelectric Point (pI)

34.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 33 - 425 1e-33 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1146
AccI GTMKAC 1 cut(s) 141
AciI CCGC 4 cut(s) 161, 184, 234, 288
AclWI GGATC 3 cut(s) 243, 944, 957
AcoI YGGCCR 3 cut(s) 235, 259, 988
AcsI RAATTY 2 cut(s) 22, 768
AcuI CTGAAG 2 cut(s) 293, 341
AcvI CACGTG 1 cut(s) 640
AfiI CCNNNNNNNGG 2 cut(s) 190, 801
AflIII ACRYGT 1 cut(s) 637
AgeI ACCGGT 1 cut(s) 71
AgsI TTSAA 6 cut(s) 305, 439, 590, 758, 782, 1313
AjiI CACGTC 1 cut(s) 82
AjnI CCWGG 3 cut(s) 62, 156, 423
AloI GAACNNNNNNTCC 2 cut(s) 185, 217
Alw26I GTCTC 1 cut(s) 477
AlwI GGATC 3 cut(s) 243, 944, 957
AlwNI CAGNNNCTG 1 cut(s) 364
Ama87I CYCGRG 1 cut(s) 94
ApeKI GCWGC 5 cut(s) 364, 497, 718, 894, 1186
ApoI RAATTY 2 cut(s) 22, 768
AsiGI ACCGGT 1 cut(s) 71
AspLEI GCGC 1 cut(s) 310
AspS9I GGNCC 6 cut(s) 56, 163, 264, 389, 749, 830
AsuHPI GGTGA 7 cut(s) 606, 665, 859, 899, 1175, 1223, 1240
AsuNHI GCTAGC 1 cut(s) 973
AvaI CYCGRG 1 cut(s) 94
AvaII GGWCC 1 cut(s) 749
BaeGI GKGCMC 1 cut(s) 796
BamHI GGATCC 1 cut(s) 949
BarI GAAGNNNNNNTAC 2 cut(s) 110, 142
BbrPI CACGTG 1 cut(s) 640
BbvCI CCTCAGC 1 cut(s) 464
BbvI GCAGC 5 cut(s) 351, 509, 730, 906, 1173
BccI CCATC 4 cut(s) 619, 638, 679, 1208
BceAI ACGGC 1 cut(s) 532
BciT130I CCWGG 3 cut(s) 64, 158, 425
BcoDI GTCTC 1 cut(s) 477
BfaI CTAG 4 cut(s) 338, 458, 962, 974
BisI GCNGC 7 cut(s) 162, 235, 365, 498, 719, 895, 1187
BlsI GCNGC 7 cut(s) 163, 236, 366, 499, 720, 896, 1188
Bme1390I CCNGG 3 cut(s) 64, 158, 425
Bme18I GGWCC 1 cut(s) 749
BmeT110I CYCGRG 1 cut(s) 94
BmgBI CACGTC 1 cut(s) 82
BmgT120I GGNCC 6 cut(s) 56, 163, 264, 389, 749, 830
BmiI GGNNCC 2 cut(s) 951, 1063
BmrFI CCNGG 3 cut(s) 64, 158, 425
BmrI ACTGGG 1 cut(s) 1093
BmsI GCATC 2 cut(s) 478, 509
BmtI GCTAGC 1 cut(s) 977
BmuI ACTGGG 1 cut(s) 1093
BpmI CTGGAG 2 cut(s) 393, 563
Bpu10I CCTNAGC 2 cut(s) 464, 520
BsaAI YACGTR 1 cut(s) 640
BsaBI GATNNNNATC 2 cut(s) 253, 948
BsaI GGTCTC 1 cut(s) 477
BsaJI CCNNGG 3 cut(s) 63, 166, 481
BsaWI WCCGGW 2 cut(s) 71, 225
BsaXI ACNNNNNCTCC 2 cut(s) 1209, 1239
Bsc4I CCNNNNNNNGG 2 cut(s) 190, 801
Bse118I RCCGGY 5 cut(s) 71, 237, 261, 986, 1129
Bse1I ACTGG 3 cut(s) 12, 410, 1088
Bse8I GATNNNNATC 2 cut(s) 253, 948
BseBI CCWGG 3 cut(s) 64, 158, 425
BseDI CCNNGG 3 cut(s) 63, 166, 481
BseJI GATNNNNATC 2 cut(s) 253, 948
BseLI CCNNNNNNNGG 2 cut(s) 190, 801
BseMII CTCAG 2 cut(s) 478, 1263
BseNI ACTGG 3 cut(s) 12, 410, 1088
BseRI GAGGAG 1 cut(s) 150
BseSI GKGCMC 1 cut(s) 796
BseX3I CGGCCG 2 cut(s) 235, 259
BseXI GCAGC 5 cut(s) 351, 509, 730, 906, 1173
BseYI CCCAGC 1 cut(s) 1193
Bsh1285I CGRYCG 3 cut(s) 54, 238, 262
BshTI ACCGGT 1 cut(s) 71
BsiEI CGRYCG 3 cut(s) 54, 238, 262
BsiHKCI CYCGRG 1 cut(s) 94
BsiSI CCGG 7 cut(s) 72, 226, 238, 258, 262, 987, 1130
BslFI GGGAC 2 cut(s) 654, 1134
BslI CCNNNNNNNGG 2 cut(s) 190, 801
BsmAI GTCTC 1 cut(s) 477
BsmFI GGGAC 2 cut(s) 654, 1134
BsmI GAATGC 1 cut(s) 896
Bso31I GGTCTC 1 cut(s) 477
BsoBI CYCGRG 1 cut(s) 94
Bsp1286I GDGCHC 1 cut(s) 796
Bsp143I GATC 4 cut(s) 248, 546, 949, 1288
BspACI CCGC 4 cut(s) 161, 184, 234, 288
BspCNI CTCAG 2 cut(s) 477, 1264
BspLI GGNNCC 2 cut(s) 951, 1063
BspOI GCTAGC 1 cut(s) 977
BspPI GGATC 3 cut(s) 243, 944, 957
BspTNI GGTCTC 1 cut(s) 477
BsrFI RCCGGY 5 cut(s) 71, 237, 261, 986, 1129
BsrI ACTGG 3 cut(s) 12, 410, 1088
BssAI RCCGGY 5 cut(s) 71, 237, 261, 986, 1129
BssECI CCNNGG 3 cut(s) 63, 166, 481
BssMI GATC 4 cut(s) 248, 546, 949, 1288
BssT1I CCWWGG 1 cut(s) 166
Bst2UI CCWGG 3 cut(s) 64, 158, 425
Bst4CI ACNGT 3 cut(s) 820, 902, 919
Bst6I CTCTTC 4 cut(s) 360, 425, 1008, 1216
BstBAI YACGTR 1 cut(s) 640
BstC8I GCNNGC 9 cut(s) 60, 263, 369, 554, 975, 984, 988, 1139, 1191
BstDEI CTNAG 5 cut(s) 7, 131, 464, 520, 1272
BstEII GGTNACC 1 cut(s) 67
BstHHI GCGC 1 cut(s) 310
BstKTI GATC 4 cut(s) 251, 549, 952, 1291
BstMAI GTCTC 1 cut(s) 477
BstMBI GATC 4 cut(s) 248, 546, 949, 1288
BstMCI CGRYCG 3 cut(s) 54, 238, 262
BstMWI GCNNNNNNNGC 3 cut(s) 497, 979, 983
BstNI CCWGG 3 cut(s) 64, 158, 425
BstNSI RCATGY 1 cut(s) 234
BstPI GGTNACC 1 cut(s) 67
BstSCI CCNGG 3 cut(s) 62, 156, 423
BstSLI GKGCMC 1 cut(s) 796
BstV1I GCAGC 5 cut(s) 351, 509, 730, 906, 1173
BstX2I RGATCY 2 cut(s) 248, 949
BstXI CCANNNNNNTGG 1 cut(s) 386
BstYI RGATCY 2 cut(s) 248, 949
BstZI CGGCCG 2 cut(s) 235, 259
BtrI CACGTC 1 cut(s) 82
BtsI GCAGTG 1 cut(s) 317
BtsIMutI CAGTG 1 cut(s) 317
Cac8I GCNNGC 9 cut(s) 60, 263, 369, 554, 975, 984, 988, 1139, 1191
CaiI CAGNNNCTG 1 cut(s) 364
CfoI GCGC 1 cut(s) 310
Cfr10I RCCGGY 5 cut(s) 71, 237, 261, 986, 1129
Cfr13I GGNCC 6 cut(s) 56, 163, 264, 389, 749, 830
CspAI ACCGGT 1 cut(s) 71
CviAII CATG 6 cut(s) 103, 172, 207, 231, 476, 532
DdeI CTNAG 5 cut(s) 7, 131, 464, 520, 1272
DpnI GATC 4 cut(s) 250, 548, 951, 1290
DpnII GATC 4 cut(s) 248, 546, 949, 1288
EaeI YGGCCR 3 cut(s) 235, 259, 988
EagI CGGCCG 2 cut(s) 235, 259
Eam1104I CTCTTC 4 cut(s) 360, 425, 1008, 1216
EarI CTCTTC 4 cut(s) 360, 425, 1008, 1216
EclXI CGGCCG 2 cut(s) 235, 259
Eco130I CCWWGG 1 cut(s) 166
Eco147I AGGCCT 1 cut(s) 462
Eco31I GGTCTC 1 cut(s) 477
Eco47I GGWCC 1 cut(s) 749
Eco52I CGGCCG 2 cut(s) 235, 259
Eco57I CTGAAG 2 cut(s) 293, 341
Eco72I CACGTG 1 cut(s) 640
Eco88I CYCGRG 1 cut(s) 94
Eco91I GGTNACC 1 cut(s) 67
EcoO65I GGTNACC 1 cut(s) 67
EcoRII CCWGG 3 cut(s) 62, 156, 423
EcoT14I CCWWGG 1 cut(s) 166
EcoT22I ATGCAT 2 cut(s) 493, 812
ErhI CCWWGG 1 cut(s) 166
FaeI CATG 6 cut(s) 106, 175, 210, 234, 479, 535
FaqI GGGAC 2 cut(s) 654, 1134
FatI CATG 6 cut(s) 102, 171, 206, 230, 475, 531
FblI GTMKAC 1 cut(s) 141
Fnu4HI GCNGC 7 cut(s) 162, 235, 365, 498, 719, 895, 1187
FseI GGCCGGCC 1 cut(s) 265
Fsp4HI GCNGC 7 cut(s) 162, 235, 365, 498, 719, 895, 1187
FspBI CTAG 4 cut(s) 338, 458, 962, 974
GlaI GCGC 1 cut(s) 309
GluI GCNGC 7 cut(s) 162, 235, 365, 498, 719, 895, 1187
GsaI CCCAGC 1 cut(s) 1197
GsuI CTGGAG 2 cut(s) 393, 563
HapII CCGG 7 cut(s) 72, 226, 238, 258, 262, 987, 1130
HhaI GCGC 1 cut(s) 310
Hin1II CATG 6 cut(s) 106, 175, 210, 234, 479, 535
Hin6I GCGC 1 cut(s) 308
HinP1I GCGC 1 cut(s) 308
HindIII AAGCTT 2 cut(s) 41, 119
HinfI GANTC 4 cut(s) 138, 254, 644, 1008
HpaII CCGG 7 cut(s) 72, 226, 238, 258, 262, 987, 1130
HphI GGTGA 7 cut(s) 606, 665, 859, 899, 1175, 1223, 1240
Hpy166II GTNNAC 4 cut(s) 142, 204, 643, 1081
Hpy188III TCNNGA 4 cut(s) 17, 302, 542, 739
Hpy8I GTNNAC 4 cut(s) 142, 204, 643, 1081
HpyAV CCTTC 4 cut(s) 821, 878, 1111, 1163
HpyCH4III ACNGT 3 cut(s) 820, 902, 919
HpyCH4IV ACGT 3 cut(s) 81, 639, 1073
HpyF10VI GCNNNNNNNGC 3 cut(s) 497, 979, 983
HpyF3I CTNAG 5 cut(s) 7, 131, 464, 520, 1272
HpySE526I ACGT 3 cut(s) 81, 639, 1073
Hsp92II CATG 6 cut(s) 106, 175, 210, 234, 479, 535
HspAI GCGC 1 cut(s) 308
KroI GCCGGC 2 cut(s) 261, 986
KroNI GCCGGC 2 cut(s) 263, 988
Kzo9I GATC 4 cut(s) 248, 546, 949, 1288
LmnI GCTCC 2 cut(s) 1061, 1172
Lsp1109I GCAGC 5 cut(s) 351, 509, 730, 906, 1173
LweI GCATC 2 cut(s) 478, 509
MaeI CTAG 4 cut(s) 338, 458, 962, 974
MaeII ACGT 3 cut(s) 81, 639, 1073
MaeIII GTNAC 7 cut(s) 67, 278, 427, 653, 706, 761, 847
MalI GATC 4 cut(s) 250, 548, 951, 1290
MboI GATC 4 cut(s) 248, 546, 949, 1288
MboII GAAGA 6 cut(s) 347, 394, 412, 1025, 1100, 1233
MflI RGATCY 2 cut(s) 248, 949
MhlI GDGCHC 1 cut(s) 796
MluCI AATT 9 cut(s) 22, 562, 676, 753, 768, 774, 798, 842, 852
MlyI GAGTC 2 cut(s) 147, 638
MmeI TCCRAC 2 cut(s) 324, 1089
Mph1103I ATGCAT 2 cut(s) 493, 812
MroNI GCCGGC 2 cut(s) 261, 986
MseI TTAA 1 cut(s) 39
MslI CAYNNNNRTG 1 cut(s) 211
MspA1I CMGCKG 1 cut(s) 468
MspI CCGG 7 cut(s) 72, 226, 238, 258, 262, 987, 1130
MspR9I CCNGG 3 cut(s) 64, 158, 425
Mva1269I GAATGC 1 cut(s) 896
MvaI CCWGG 3 cut(s) 64, 158, 425
MwoI GCNNNNNNNGC 3 cut(s) 497, 979, 983
NaeI GCCGGC 2 cut(s) 263, 988
NdeII GATC 4 cut(s) 248, 546, 949, 1288
NgoMIV GCCGGC 2 cut(s) 261, 986
NheI GCTAGC 1 cut(s) 973
NlaIII CATG 6 cut(s) 106, 175, 210, 234, 479, 535
NlaIV GGNNCC 2 cut(s) 951, 1063
NmuCI GTSAC 3 cut(s) 653, 761, 847
NsiI ATGCAT 2 cut(s) 493, 812
NspI RCATGY 1 cut(s) 234
PceI AGGCCT 1 cut(s) 462
PctI GAATGC 1 cut(s) 896
PdiI GCCGGC 2 cut(s) 263, 988
PfeI GAWTC 2 cut(s) 254, 1008
PinAI ACCGGT 1 cut(s) 71
PkrI GCNGC 7 cut(s) 163, 236, 366, 499, 720, 896, 1188
PleI GAGTC 2 cut(s) 146, 638
PmaCI CACGTG 1 cut(s) 640
PmlI CACGTG 1 cut(s) 640
PpsI GAGTC 2 cut(s) 146, 638
Ppu21I YACGTR 1 cut(s) 640
PsiI TTATAA 1 cut(s) 1146
Psp6I CCWGG 3 cut(s) 62, 156, 423
PspCI CACGTG 1 cut(s) 640
PspEI GGTNACC 1 cut(s) 67
PspFI CCCAGC 1 cut(s) 1193
PspGI CCWGG 3 cut(s) 62, 156, 423
PspN4I GGNNCC 2 cut(s) 951, 1063
PspPI GGNCC 6 cut(s) 56, 163, 264, 389, 749, 830
PstNI CAGNNNCTG 1 cut(s) 364
PsuI RGATCY 2 cut(s) 248, 949
PvuII CAGCTG 1 cut(s) 468
RigI GGCCGGCC 1 cut(s) 265
RseI CAYNNNNRTG 1 cut(s) 211
SaqAI TTAA 1 cut(s) 39
SatI GCNGC 7 cut(s) 162, 235, 365, 498, 719, 895, 1187
Sau3AI GATC 4 cut(s) 248, 546, 949, 1288
Sau96I GGNCC 6 cut(s) 56, 163, 264, 389, 749, 830
SchI GAGTC 2 cut(s) 147, 638
ScrFI CCNGG 3 cut(s) 64, 158, 425
SduI GDGCHC 1 cut(s) 796
SfaNI GCATC 2 cut(s) 478, 509
SinI GGWCC 1 cut(s) 749
SmiMI CAYNNNNRTG 1 cut(s) 211
Sse9I AATT 9 cut(s) 22, 562, 676, 753, 768, 774, 798, 842, 852
SseBI AGGCCT 1 cut(s) 462
SsiI CCGC 4 cut(s) 161, 184, 234, 288
SspMI CTAG 4 cut(s) 338, 458, 962, 974
StuI AGGCCT 1 cut(s) 462
StyD4I CCNGG 3 cut(s) 62, 156, 423
StyI CCWWGG 1 cut(s) 166
TaaI ACNGT 3 cut(s) 820, 902, 919
TaiI ACGT 3 cut(s) 84, 642, 1076
TaqI TCGA 2 cut(s) 327, 1011
TaqII GACCGA 1 cut(s) 40
TasI AATT 9 cut(s) 22, 562, 676, 753, 768, 774, 798, 842, 852
TauI GCSGC 2 cut(s) 164, 237
TfiI GAWTC 2 cut(s) 254, 1008
Tru1I TTAA 1 cut(s) 39
Tru9I TTAA 1 cut(s) 39
TscAI CASTG 1 cut(s) 317
TseFI GTSAC 3 cut(s) 653, 761, 847
TseI GCWGC 5 cut(s) 364, 497, 718, 894, 1186
Tsp45I GTSAC 3 cut(s) 653, 761, 847
TspDTI ATGAA 6 cut(s) 36, 77, 131, 345, 499, 1182
TspRI CASTG 1 cut(s) 317
VpaK11BI GGWCC 1 cut(s) 749
XapI RAATTY 2 cut(s) 22, 768
XceI RCATGY 1 cut(s) 234
XcmI CCANNNNNNNNNTGG 1 cut(s) 637
XmiI GTMKAC 1 cut(s) 141
XspI CTAG 4 cut(s) 338, 458, 962, 974
Zsp2I ATGCAT 2 cut(s) 493, 812
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.