AT3G28007

Mediates both low-affinity uptake and efflux of sugar across the

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
10408073 .. 10409977
1905 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G28007.1

Sequence Viewer

Length: 756 bp
ATGGTTAACGCTACAGTTGCGAGAAACATTGCCGGCATTTGTGGAAATGTCATCTCCTTGTTCTTGTTCTTATCTCCCATACCTACGTTCATAACCATATACAAGAAGAAAAAGGTGGAGGAGTACAAAGCTGACCCATACTTAGCCACGGTTCTAAATTGCGCACTATGGGTCTTTTATGGCTTACCAATGGTTCAACCAGATAGTCTCCTTGTGATCACCATAAATGGTACCGGTTTAGCCATTGAGCTGGTGTATCTCGCTATCTTCTTCTTCTTTTCTCCAACTAGTCGCAAGGTGAAAGTGGGGCTATGGTTAATAGGAGAGATGGTGTTTGTAGGAATAGTAGCCACATGCACATTGCTATTGTTCCACACACATAACCAGAGATCTTCTTTTGTTGGAATCTTTTGTGTCATTTTTGTTAGTCTCATGTATATTGCTCCTCTCACCATCATGAGTAAGGTGATCAAGACCAAAAGTGTGAAGTACATGCCATTCTCTCTCTCACTTGCCAATTTCCTCAATGGTGTCGTTTGGGTTATTTATGCACTTATTAAGTTCGACCTTTTCATTTTGATTGGAAATGGACTTGGAACGGTATCAGGAGCAGTACAACTTATACTCTATGCTTGCTATTACAAGACAACACCAAAAGATGATGAAGATGAAGAAGATGAGGAGAATCTTTCTAAGGTTAACTCTCAGTTACAACTTAGTGGCAACAGTGGACAAGCTAAACGAGTTTCAGCTTGA

Protein Analysis

251

Amino Acids

27.81

Weight (kDa)

8.71

Isoelectric Point (pI)

38.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MtN3_slv PF03083 12 - 96 6.2e-20 Sugar efflux transporter for intercellular exchange
MtN3_slv PF03083 133 - 216 7.9e-23 Sugar efflux transporter for intercellular exchange
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0014909)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 163
Acc65I GGTACC 1 cut(s) 230
AccB1I GGYRCC 1 cut(s) 230
AfaI GTAC 4 cut(s) 125, 232, 491, 615
AgeI ACCGGT 1 cut(s) 233
AgsI TTSAA 1 cut(s) 197
AhlI ACTAGT 1 cut(s) 287
AluBI AGCT 4 cut(s) 131, 250, 737, 752
AluI AGCT 4 cut(s) 131, 250, 737, 752
Alw26I GTCTC 2 cut(s) 212, 434
AsiGI ACCGGT 1 cut(s) 233
Asp718I GGTACC 1 cut(s) 230
AspLEI GCGC 1 cut(s) 164
AsuHPI GGTGA 4 cut(s) 211, 310, 442, 478
BanI GGYRCC 1 cut(s) 230
BccI CCATC 2 cut(s) 322, 461
BclI TGATCA 2 cut(s) 216, 468
BcoDI GTCTC 2 cut(s) 212, 434
BcuI ACTAGT 1 cut(s) 287
BfaI CTAG 1 cut(s) 288
BfmI CTRYAG 1 cut(s) 12
BglII AGATCT 1 cut(s) 389
BmiI GGNNCC 1 cut(s) 232
BsaJI CCNNGG 1 cut(s) 147
BsaWI WCCGGW 1 cut(s) 233
BsaXI ACNNNNNCTCC 2 cut(s) 315, 345
Bse118I RCCGGY 2 cut(s) 32, 233
Bse3DI GCAATG 2 cut(s) 27, 359
BseDI CCNNGG 1 cut(s) 147
BseMI GCAATG 2 cut(s) 27, 359
BseMII CTCAG 1 cut(s) 719
BseRI GAGGAG 3 cut(s) 134, 435, 695
BshNI GGYRCC 1 cut(s) 230
BshTI ACCGGT 1 cut(s) 233
BsiSI CCGG 2 cut(s) 33, 234
BsmAI GTCTC 2 cut(s) 212, 434
Bsp143I GATC 3 cut(s) 216, 389, 468
BspCNI CTCAG 1 cut(s) 718
BspHI TCATGA 1 cut(s) 456
BspLI GGNNCC 1 cut(s) 232
BspT107I GGYRCC 1 cut(s) 230
BsrDI GCAATG 2 cut(s) 27, 359
BsrFI RCCGGY 2 cut(s) 32, 233
BssAI RCCGGY 2 cut(s) 32, 233
BssECI CCNNGG 1 cut(s) 147
BssMI GATC 3 cut(s) 216, 389, 468
Bst4CI ACNGT 4 cut(s) 16, 151, 601, 728
BstC8I GCNNGC 2 cut(s) 34, 634
BstDEI CTNAG 4 cut(s) 142, 693, 705, 716
BstDSI CCRYGG 1 cut(s) 147
BstHHI GCGC 1 cut(s) 164
BstKTI GATC 3 cut(s) 219, 392, 471
BstMAI GTCTC 2 cut(s) 212, 434
BstMBI GATC 3 cut(s) 216, 389, 468
BstMWI GCNNNNNNNGC 1 cut(s) 17
BstNSI RCATGY 2 cut(s) 357, 496
BstSFI CTRYAG 1 cut(s) 12
BstX2I RGATCY 1 cut(s) 389
BstXI CCANNNNNNTGG 1 cut(s) 250
BstYI RGATCY 1 cut(s) 389
BtgI CCRYGG 1 cut(s) 147
BtsIMutI CAGTG 1 cut(s) 733
Cac8I GCNNGC 2 cut(s) 34, 634
CciI TCATGA 1 cut(s) 456
CfoI GCGC 1 cut(s) 164
Cfr10I RCCGGY 2 cut(s) 32, 233
Csp6I GTAC 4 cut(s) 124, 231, 490, 614
CspAI ACCGGT 1 cut(s) 233
CviAII CATG 4 cut(s) 354, 433, 457, 493
CviJI RGCY 9 cut(s) 131, 146, 183, 242, 250, 310, 350, 737, 752
CviKI_1 RGCY 9 cut(s) 131, 146, 183, 242, 250, 310, 350, 737, 752
CviQI GTAC 4 cut(s) 124, 231, 490, 614
DdeI CTNAG 4 cut(s) 142, 693, 705, 716
DpnI GATC 3 cut(s) 218, 391, 470
DpnII GATC 3 cut(s) 216, 389, 468
FaeI CATG 4 cut(s) 357, 436, 460, 496
FatI CATG 4 cut(s) 353, 432, 456, 492
FbaI TGATCA 2 cut(s) 216, 468
FspBI CTAG 1 cut(s) 288
FspI TGCGCA 1 cut(s) 163
GlaI GCGC 1 cut(s) 163
HapII CCGG 2 cut(s) 33, 234
HhaI GCGC 1 cut(s) 164
Hin1II CATG 4 cut(s) 357, 436, 460, 496
Hin6I GCGC 1 cut(s) 162
HinP1I GCGC 1 cut(s) 162
HincII GTYRAC 2 cut(s) 7, 700
HindII GTYRAC 2 cut(s) 7, 700
HinfI GANTC 2 cut(s) 405, 685
HpaI GTTAAC 2 cut(s) 7, 700
HpaII CCGG 2 cut(s) 33, 234
HphI GGTGA 4 cut(s) 211, 310, 442, 478
Hpy166II GTNNAC 3 cut(s) 7, 700, 731
Hpy188III TCNNGA 3 cut(s) 457, 472, 606
Hpy8I GTNNAC 3 cut(s) 7, 700, 731
HpyCH4III ACNGT 4 cut(s) 16, 151, 601, 728
HpyCH4IV ACGT 1 cut(s) 86
HpyCH4V TGCA 2 cut(s) 357, 551
HpyF10VI GCNNNNNNNGC 1 cut(s) 17
HpyF3I CTNAG 4 cut(s) 142, 693, 705, 716
HpySE526I ACGT 1 cut(s) 86
Hsp92II CATG 4 cut(s) 357, 436, 460, 496
HspAI GCGC 1 cut(s) 162
KpnI GGTACC 1 cut(s) 234
KroI GCCGGC 1 cut(s) 32
KroNI GCCGGC 1 cut(s) 34
Ksp22I TGATCA 2 cut(s) 216, 468
KspAI GTTAAC 2 cut(s) 7, 700
Kzo9I GATC 3 cut(s) 216, 389, 468
LmnI GCTCC 2 cut(s) 448, 608
LpnPI CCDG 6 cut(s) 46, 213, 236, 247, 398, 591
MaeI CTAG 1 cut(s) 288
MaeII ACGT 1 cut(s) 86
MaeIII GTNAC 1 cut(s) 708
MalI GATC 3 cut(s) 218, 391, 470
MboI GATC 3 cut(s) 216, 389, 468
MboII GAAGA 8 cut(s) 118, 259, 262, 265, 384, 677, 683, 686
MflI RGATCY 1 cut(s) 389
MluCI AATT 2 cut(s) 157, 517
MmeI TCCRAC 2 cut(s) 308, 382
MnlI CCTC 4 cut(s) 112, 456, 533, 673
MroNI GCCGGC 1 cut(s) 32
MseI TTAA 4 cut(s) 6, 317, 558, 699
MslI CAYNNNNRTG 1 cut(s) 455
MspI CCGG 2 cut(s) 33, 234
MwoI GCNNNNNNNGC 1 cut(s) 17
NaeI GCCGGC 1 cut(s) 34
NdeII GATC 3 cut(s) 216, 389, 468
NgoMIV GCCGGC 1 cut(s) 32
NlaIII CATG 4 cut(s) 357, 436, 460, 496
NlaIV GGNNCC 1 cut(s) 232
NsbI TGCGCA 1 cut(s) 163
NspI RCATGY 2 cut(s) 357, 496
PagI TCATGA 1 cut(s) 456
PdiI GCCGGC 1 cut(s) 34
PfeI GAWTC 2 cut(s) 405, 685
PinAI ACCGGT 1 cut(s) 233
PspN4I GGNNCC 1 cut(s) 232
PsuI RGATCY 1 cut(s) 389
RsaI GTAC 4 cut(s) 125, 232, 491, 615
RsaNI GTAC 4 cut(s) 124, 231, 490, 614
RseI CAYNNNNRTG 1 cut(s) 455
SaqAI TTAA 4 cut(s) 6, 317, 558, 699
Sau3AI GATC 3 cut(s) 216, 389, 468
SfcI CTRYAG 1 cut(s) 12
SmiMI CAYNNNNRTG 1 cut(s) 455
SpeI ACTAGT 1 cut(s) 287
Sse9I AATT 2 cut(s) 157, 517
SspMI CTAG 1 cut(s) 288
TaaI ACNGT 4 cut(s) 16, 151, 601, 728
TaiI ACGT 1 cut(s) 89
TaqI TCGA 1 cut(s) 564
TasI AATT 2 cut(s) 157, 517
TatI WGTACW 3 cut(s) 123, 489, 613
TfiI GAWTC 2 cut(s) 405, 685
Tru1I TTAA 4 cut(s) 6, 317, 558, 699
Tru9I TTAA 4 cut(s) 6, 317, 558, 699
TscAI CASTG 1 cut(s) 733
TspDTI ATGAA 4 cut(s) 79, 562, 678, 684
TspRI CASTG 1 cut(s) 733
XceI RCATGY 2 cut(s) 357, 496
XspI CTAG 1 cut(s) 288
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.