Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0014909

Physical Location & Seq

Genomic Coordinates Reverse (-)

27571175 .. 27573168

Gene Structure 1994 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1183000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 711 bp

ATGGTGGATACAGGCTTAATCAGAACGATTATTGGCATTATTGGAAATGTCATCTCTTTGTGCTTATTTCTCTCCCCAATCCCAACATTTTATAGAATAGTAAAGCAAAAAGCAGTATCAGATTTCAAGCCGGATCCCTACGTAGTAACGTTGCTGAATTGTGCCTTATGGCTCTTCTATGGCATGCCCTTTGTCCATCCTGACAGCATTCTTGTGATAACAATCAATGGCATTGGATTTGTCACCGAACTCGCCTACATTTTCGTCTTCTTAATCTTTTCTCCAGGTTCACAACGCTTGAAGGTCTTTATTGCACTTGTGGTTGAAGTTGTCTTCTTTGTTATTGTGGTTTTTGTTACCATGTACGTTTTCAGTACAACTAAAGAGCGGTCTCTGGTAGTTGGGATCATCTGCATTGTCTTCAACATCCTTATGTATGTATCACCATTGACAGTCATGGGTATAGTGATCAAGACAAAGAGCGTAAAGTATATGCCATTTTACCTCTCACTTGCTAACTTCTTCAATGGAGTTATTTGGCTGGTCTACTCACTCCTCAAACTGGATATCAATATTCTGATTCCAAATGGTTTGGGAACGATTTCCGGCGCATTGCAGCTCATTTTGTACGCCGCCTTCTACAAAACCACTCGATGGGAAGACGACGTTGATGTCAGACCGCGGTCGGAGGTCCAAGTGTCCAATGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0008150 GO:0008643 GO:0009987 GO:0015144 GO:0016020 GO:0016021 GO:0016043 GO:0022607 GO:0022857 GO:0031224 GO:0031226 GO:0034219 GO:0043933 GO:0044085 GO:0044425 GO:0044459 GO:0044464 GO:0051119 GO:0051179 GO:0051234 GO:0051259 GO:0051260 GO:0055085 GO:0065003 GO:0071702 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MtN3_slv

Protein Analysis

237

Amino Acids

26.58

Weight (kDa)

8.93

Isoelectric Point (pI)

38.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MtN3_slv	PF03083	10 - 95	6.5e-22	Sugar efflux transporter for intercellular exchange
MtN3_slv	PF03083	133 - 216	6.5e-23	Sugar efflux transporter for intercellular exchange

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0014909)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28007
fragaria_vesca	FvH4_5g05160
malus_domestica	MD06G1176800.v1.1 MD14G1183000.v1.1
prunus_persica	Prupe.5G175500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0193801
rosa_laevigata	RLG00000004244
rosa_roxburghii	Rroxscaffold_3G00261820
rosa_rugosa	Rorug07G0012000 Rorug07G0012100
rosa_samantha	Rh7AG138700 Rh7BG139000 Rh7CG142600 Rh7CG142700 Rh7DG140200
rosa_wichuraiana	Rw7G011820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	671
AccB7I	CCANNNNNTGG	1 cut(s)	654
AccBSI	CCGCTC	1 cut(s)	388
AccI	GTMKAC	1 cut(s)	546
AccII	CGCG	1 cut(s)	682
AciI	CCGC	4 cut(s)	388, 633, 680, 682
AclI	AACGTT	1 cut(s)	149
AclWI	GGATC	3 cut(s)	128, 141, 413
AfaI	GTAC	3 cut(s)	365, 376, 629
AfiI	CCNNNNNNNGG	2 cut(s)	562, 654
AgsI	TTSAA	5 cut(s)	127, 301, 326, 424, 526
AjnI	CCWGG	1 cut(s)	283
AluBI	AGCT	1 cut(s)	619
AluI	AGCT	1 cut(s)	619
Alw26I	GTCTC	1 cut(s)	396
AlwI	GGATC	3 cut(s)	128, 141, 413
ApeKI	GCWGC	1 cut(s)	616
Asp700I	GAANNNNTTC	1 cut(s)	601
AspLEI	GCGC	1 cut(s)	611
AspS9I	GGNCC	1 cut(s)	691
AsuHPI	GGTGA	2 cut(s)	235, 435
AvaII	GGWCC	1 cut(s)	691
BamHI	GGATCC	1 cut(s)	133
BarI	GAAGNNNNNNTAC	2 cut(s)	620, 652
BbsI	GAAGAC	4 cut(s)	259, 325, 412, 666
BbvI	GCAGC	1 cut(s)	628
BccI	CCATC	2 cut(s)	204, 648
BciT130I	CCWGG	1 cut(s)	285
BclI	TGATCA	1 cut(s)	468
BcoDI	GTCTC	1 cut(s)	396
BisI	GCNGC	2 cut(s)	617, 633
BlsI	GCNGC	2 cut(s)	618, 634
Bme1390I	CCNGG	1 cut(s)	285
Bme18I	GGWCC	1 cut(s)	691
BmgT120I	GGNCC	1 cut(s)	691
BmiI	GGNNCC	1 cut(s)	135
BmrFI	CCNGG	1 cut(s)	285
BoxI	GACNNNNGTC	1 cut(s)	682
BpiI	GAAGAC	4 cut(s)	259, 325, 412, 666
BpmI	CTGGAG	1 cut(s)	267
BsaAI	YACGTR	1 cut(s)	142
BsaBI	GATNNNNATC	1 cut(s)	221
BsaI	GGTCTC	1 cut(s)	396
BsaJI	CCNNGG	1 cut(s)	680
Bsc4I	CCNNNNNNNGG	2 cut(s)	562, 654
Bse1I	ACTGG	1 cut(s)	567
Bse3DI	GCAATG	1 cut(s)	611
Bse8I	GATNNNNATC	1 cut(s)	221
BseBI	CCWGG	1 cut(s)	285
BseDI	CCNNGG	1 cut(s)	680
BseGI	GGATG	2 cut(s)	196, 426
BseJI	GATNNNNATC	1 cut(s)	221
BseLI	CCNNNNNNNGG	2 cut(s)	562, 654
BseMI	GCAATG	1 cut(s)	611
BseNI	ACTGG	1 cut(s)	567
BseRI	GAGGAG	1 cut(s)	545
BseXI	GCAGC	1 cut(s)	628
Bsh1236I	CGCG	1 cut(s)	682
Bsh1285I	CGRYCG	1 cut(s)	686
BsiEI	CGRYCG	1 cut(s)	686
BsiSI	CCGG	2 cut(s)	131, 606
BslI	CCNNNNNNNGG	2 cut(s)	562, 654
BsmAI	GTCTC	1 cut(s)	396
BsmI	GAATGC	1 cut(s)	207
Bso31I	GGTCTC	1 cut(s)	396
Bsp143I	GATC	3 cut(s)	133, 405, 468
BspACI	CCGC	4 cut(s)	388, 633, 680, 682
BspFNI	CGCG	1 cut(s)	682
BspLI	GGNNCC	1 cut(s)	135
BspPI	GGATC	3 cut(s)	128, 141, 413
BspQI	GCTCTTC	1 cut(s)	179
BspTNI	GGTCTC	1 cut(s)	396
BsrBI	CCGCTC	1 cut(s)	388
BsrDI	GCAATG	1 cut(s)	611
BsrI	ACTGG	1 cut(s)	567
BssECI	CCNNGG	1 cut(s)	680
BssMI	GATC	3 cut(s)	133, 405, 468
Bst2UI	CCWGG	1 cut(s)	285
Bst4CI	ACNGT	1 cut(s)	454
Bst6I	CTCTTC	1 cut(s)	179
BstBAI	YACGTR	1 cut(s)	142
BstC8I	GCNNGC	1 cut(s)	185
BstDSI	CCRYGG	1 cut(s)	680
BstF5I	GGATG	2 cut(s)	196, 426
BstFNI	CGCG	1 cut(s)	682
BstHHI	GCGC	1 cut(s)	611
BstKTI	GATC	3 cut(s)	136, 408, 471
BstMAI	GTCTC	1 cut(s)	396
BstMBI	GATC	3 cut(s)	133, 405, 468
BstMCI	CGRYCG	1 cut(s)	686
BstNI	CCWGG	1 cut(s)	285
BstNSI	RCATGY	1 cut(s)	187
BstPAI	GACNNNNGTC	1 cut(s)	682
BstSCI	CCNGG	1 cut(s)	283
BstSNI	TACGTA	1 cut(s)	142
BstUI	CGCG	1 cut(s)	682
BstV1I	GCAGC	1 cut(s)	628
BstV2I	GAAGAC	4 cut(s)	259, 325, 412, 666
BstX2I	RGATCY	1 cut(s)	133
BstYI	RGATCY	1 cut(s)	133
BtgI	CCRYGG	1 cut(s)	680
BtsCI	GGATG	2 cut(s)	196, 426
Cac8I	GCNNGC	1 cut(s)	185
CfoI	GCGC	1 cut(s)	611
Cfr13I	GGNCC	1 cut(s)	691
Cfr42I	CCGCGG	1 cut(s)	683
Csp6I	GTAC	3 cut(s)	364, 375, 628
CviAII	CATG	3 cut(s)	184, 361, 457
CviJI	RGCY	5 cut(s)	15, 130, 172, 541, 619
CviKI_1	RGCY	5 cut(s)	15, 130, 172, 541, 619
CviQI	GTAC	3 cut(s)	364, 375, 628
DpnI	GATC	3 cut(s)	135, 407, 470
DpnII	GATC	3 cut(s)	133, 405, 468
DrdI	GACNNNNNNGTC	1 cut(s)	671
DseDI	GACNNNNNNGTC	1 cut(s)	671
Eam1104I	CTCTTC	1 cut(s)	179
EarI	CTCTTC	1 cut(s)	179
Eco105I	TACGTA	1 cut(s)	142
Eco31I	GGTCTC	1 cut(s)	396
Eco32I	GATATC	1 cut(s)	568
Eco47I	GGWCC	1 cut(s)	691
EcoRII	CCWGG	1 cut(s)	283
EcoRV	GATATC	1 cut(s)	568
FaeI	CATG	3 cut(s)	187, 364, 460
FatI	CATG	3 cut(s)	183, 360, 456
FbaI	TGATCA	1 cut(s)	468
FblI	GTMKAC	1 cut(s)	546
Fnu4HI	GCNGC	2 cut(s)	617, 633
FokI	GGATG	2 cut(s)	183, 413
Fsp4HI	GCNGC	2 cut(s)	617, 633
GlaI	GCGC	1 cut(s)	610
GluI	GCNGC	2 cut(s)	617, 633
GsuI	CTGGAG	1 cut(s)	267
HapII	CCGG	2 cut(s)	131, 606
HhaI	GCGC	1 cut(s)	611
Hin1II	CATG	3 cut(s)	187, 364, 460
Hin6I	GCGC	1 cut(s)	609
HinP1I	GCGC	1 cut(s)	609
HinfI	GANTC	1 cut(s)	580
HpaII	CCGG	2 cut(s)	131, 606
HphI	GGTGA	2 cut(s)	235, 435
Hpy166II	GTNNAC	2 cut(s)	290, 547
Hpy188I	TCNGA	5 cut(s)	23, 121, 579, 677, 688
Hpy188III	TCNNGA	2 cut(s)	200, 472
Hpy8I	GTNNAC	2 cut(s)	290, 547
Hpy99I	CGWCG	1 cut(s)	668
HpyAV	CCTTC	2 cut(s)	295, 646
HpyCH4III	ACNGT	1 cut(s)	454
HpyCH4IV	ACGT	4 cut(s)	141, 149, 366, 666
HpyCH4V	TGCA	3 cut(s)	314, 414, 616
HpySE526I	ACGT	4 cut(s)	141, 149, 366, 666
Hsp92II	CATG	3 cut(s)	187, 364, 460
HspAI	GCGC	1 cut(s)	609
Ksp22I	TGATCA	1 cut(s)	468
KspI	CCGCGG	1 cut(s)	683
Kzo9I	GATC	3 cut(s)	133, 405, 468
LguI	GCTCTTC	1 cut(s)	179
LpnPI	CCDG	8 cut(s)	144, 213, 270, 297, 380, 527, 548, 619
Lsp1109I	GCAGC	1 cut(s)	628
MaeII	ACGT	4 cut(s)	141, 149, 366, 666
MaeIII	GTNAC	3 cut(s)	145, 241, 355
MalI	GATC	3 cut(s)	135, 407, 470
MbiI	CCGCTC	1 cut(s)	388
MboI	GATC	3 cut(s)	133, 405, 468
MboII	GAAGA	6 cut(s)	166, 259, 325, 412, 514, 671
MflI	RGATCY	1 cut(s)	133
MluCI	AATT	1 cut(s)	157
MmeI	TCCRAC	1 cut(s)	666
MnlI	CCTC	3 cut(s)	515, 566, 682
MroXI	GAANNNNTTC	1 cut(s)	601
MseI	TTAA	2 cut(s)	17, 272
MslI	CAYNNNNRTG	2 cut(s)	212, 431
MspA1I	CMGCKG	1 cut(s)	682
MspI	CCGG	2 cut(s)	131, 606
MspR9I	CCNGG	1 cut(s)	285
Mva1269I	GAATGC	1 cut(s)	207
MvaI	CCWGG	1 cut(s)	285
MvnI	CGCG	1 cut(s)	682
NdeII	GATC	3 cut(s)	133, 405, 468
NlaIII	CATG	3 cut(s)	187, 364, 460
NlaIV	GGNNCC	1 cut(s)	135
NmuCI	GTSAC	1 cut(s)	241
NspI	RCATGY	1 cut(s)	187
PaeI	GCATGC	1 cut(s)	187
PciSI	GCTCTTC	1 cut(s)	179
PctI	GAATGC	1 cut(s)	207
PdmI	GAANNNNTTC	1 cut(s)	601
PfeI	GAWTC	1 cut(s)	580
PflMI	CCANNNNNTGG	1 cut(s)	654
PkrI	GCNGC	2 cut(s)	618, 634
Ppu21I	YACGTR	1 cut(s)	142
PshAI	GACNNNNGTC	1 cut(s)	682
Psp1406I	AACGTT	1 cut(s)	149
Psp6I	CCWGG	1 cut(s)	283
PspGI	CCWGG	1 cut(s)	283
PspN4I	GGNNCC	1 cut(s)	135
PspPI	GGNCC	1 cut(s)	691
PsuI	RGATCY	1 cut(s)	133
RsaI	GTAC	3 cut(s)	365, 376, 629
RsaNI	GTAC	3 cut(s)	364, 375, 628
RseI	CAYNNNNRTG	2 cut(s)	212, 431
SacII	CCGCGG	1 cut(s)	683
SapI	GCTCTTC	1 cut(s)	179
SaqAI	TTAA	2 cut(s)	17, 272
SatI	GCNGC	2 cut(s)	617, 633
Sau3AI	GATC	3 cut(s)	133, 405, 468
Sau96I	GGNCC	1 cut(s)	691
ScrFI	CCNGG	1 cut(s)	285
SetI	ASST	9 cut(s)	144, 152, 289, 306, 369, 507, 621, 669, 693
Sfr303I	CCGCGG	1 cut(s)	683
SgrBI	CCGCGG	1 cut(s)	683
SinI	GGWCC	1 cut(s)	691
SmiMI	CAYNNNNRTG	2 cut(s)	212, 431
SnaBI	TACGTA	1 cut(s)	142
SphI	GCATGC	1 cut(s)	187
Sse9I	AATT	1 cut(s)	157
SsiI	CCGC	4 cut(s)	388, 633, 680, 682
SspI	AATATT	1 cut(s)	574
StyD4I	CCNGG	1 cut(s)	283
TaaI	ACNGT	1 cut(s)	454
TaiI	ACGT	4 cut(s)	144, 152, 369, 669
TaqI	TCGA	1 cut(s)	652
TasI	AATT	1 cut(s)	157
TatI	WGTACW	1 cut(s)	374
TauI	GCSGC	1 cut(s)	635
TfiI	GAWTC	1 cut(s)	580
Tru1I	TTAA	2 cut(s)	17, 272
Tru9I	TTAA	2 cut(s)	17, 272
TseFI	GTSAC	1 cut(s)	241
TseI	GCWGC	1 cut(s)	616
Tsp45I	GTSAC	1 cut(s)	241
Van91I	CCANNNNNTGG	1 cut(s)	654
VpaK11BI	GGWCC	1 cut(s)	691
XceI	RCATGY	1 cut(s)	187
XmiI	GTMKAC	1 cut(s)	546
XmnI	GAANNNNTTC	1 cut(s)	601

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.