AT3G44370

ALBINO3-like protein 3, mitochondrial isoform X1

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
16030270 .. 16035273
5004 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G44370.1

Sequence Viewer

Length: 1701 bp
ATGGCATTTCGTAGGGTTTTACTCTCTCACCTCCGCCGATCTCACCACACTTGCTCCTCTCTCTCTCCTCACCATGTCTCCGCCACAACCCAACCTTCAATCGCGCTCGCTCTTTTCCAATCCCGCTTCTTTTCCACTCCATCTGACCTAGATTCTGAGCTAACTCGATTCAGAGACGATTCAATCGCTGGCGTTGGAAGCAATGATCATGGCTTAGAGTTCGACGATTCAATCGCTAGCTTGGGAAGCAATGGTCATGGCTTAGAGTTCGGCGATTCAATCGGTAGCTTGGGAAGCAATGGTTATGGATTAGAGTTCGGTGACTTGAGCCAGGATTTGTCAAACTATGATTACTTGACTCAACCTGTGATCTCGTTGCTTGATTCATACCATGACATCACTGGATTGCCTTGGTGGGTGGTTATTGCTACGTCTACTGTGGCATTTAGAACGGCTTTGCTTCCTATACTGATTTTGCAACGGAAGCAAACTAAAAGGATCTCACAGTTCTTACCTAAGCTACCGCATTTCTGGCCTCCACAAGGTTCAGGAAGGAGTGTTCTTGATCAATTGAAGCTTTTTCGGAAGGAAAGAAAAGATATCGGGTGCCCTTCGTTTTTGTGGGTTCCTGCTTATTTCTCCATCCAGATTTCATGTTTTTTCTTGTGGATAACTAGCATCAGAAGAATGTCACTTGATCATCATCCTGGATTTGATTCGGGTGGAGCTTTATGGTTTCAGAATTTGACCGAAATTCCCAATGGTCTTTATGGTCCACTTTTCCCCTTTTTAATAGCTGGTTTGCATTACACAAACACACAGATAACTTTTACAGCATCCTCAGTTCACAAAGTTGATAAATTCACGGAATTGGCAAAAGCTTACAAGACATTTCTGAATCTTTTGACATGTGCTCTGTATTTCCTTTCATTCCAAATGCCTCAGGGAAGTCTACTCTACTGGGCTACCAATTTGTCATTCAGCATTGCTCAGCAATCAATCCTTAACCATCCCGTTGTAAGTGCAAAGTTGGGCCTACAAGCAAATGACTCTGTACAGAAAGAAGCTGGCAATCCTATATTAACAAATATAAATGAAGGGAAACTCACTGATCCATCCTCGAAAGGACGGTTGATCTCAGTGCATAACTTAACCCCTAAGGAGTTGGTTGCTCTTTCTGCTAAATACTTATCCGGAGGGCACAAGGATAAATCAATTCCGCTATTAAGATTGGCATTAGAAAAGGATCCTGAATACCTTCAAGCTATGATTATTCTTGGACAGGCTTTATATCAGAAAGACCAGTTCGCGGAAGCTGCAAAATGCTTAGAGCAGGCTGCTTCAAAGCTTCTTGATACCAGTCCAACCGAAGTTGAAGAAGTCGATCTTTTAATTGTTGCATCCCAATGGGCAGGTGTCTCCAATATACGTCAGGGGAAGACATCAGAAGGAATCACACACCTTGAAAGAGTAGCAAACATGAAAGAGCCCGACGATCCTAAGAGCAAAGCTCATTACTTGGATGCATTGGTACTCTACTCAAGTGCGATATTCAACGAAGGAAGGAGAGAGGAAGCAGCAAAGTATTTGAGAAGAGTGGTGGCTTATGATCCTTCCTTCAGTGAATTGTTGAAACAATGCGAAGAAGATGATACCATTCCCACTTCTTCTTCATCTAATTCTACCAGCAAAACTTCATAA

Protein Analysis

566

Amino Acids

62.8

Weight (kDa)

6.42

Isoelectric Point (pI)

46.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
60KD_IMP PF02096 138 - 336 9.6e-07 60Kd inner membrane protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1403
Acc36I ACCTGC 1 cut(s) 1403
AccB1I GGYRCC 1 cut(s) 606
AccI GTMKAC 2 cut(s) 434, 952
AccII CGCG 2 cut(s) 104, 1310
AccIII TCCGGA 1 cut(s) 1193
AciI CCGC 6 cut(s) 34, 81, 124, 524, 1220, 1310
AclWI GGATC 6 cut(s) 506, 1106, 1241, 1254, 1490, 1604
AcsI RAATTY 3 cut(s) 742, 753, 860
AcuI CTGAAG 1 cut(s) 1603
AfaI GTAC 2 cut(s) 1056, 1533
AfiI CCNNNNNNNGG 2 cut(s) 542, 1309
AflIII ACRYGT 1 cut(s) 908
AjnI CCWGG 2 cut(s) 330, 706
AjuI GAANNNNNNNTTGG 2 cut(s) 962, 994
AloI GAACNNNNNNTCC 2 cut(s) 543, 575
Alw21I GWGCWC 1 cut(s) 916
Alw26I GTCTC 3 cut(s) 82, 168, 1423
AlwI GGATC 6 cut(s) 506, 1106, 1241, 1254, 1490, 1604
Aor13HI TCCGGA 1 cut(s) 1193
AoxI GGCC 2 cut(s) 533, 1033
ApeKI GCWGC 3 cut(s) 1316, 1337, 1577
ApoI RAATTY 3 cut(s) 742, 753, 860
Asp700I GAANNNNTTC 1 cut(s) 1257
AspLEI GCGC 1 cut(s) 106
AspS9I GGNCC 2 cut(s) 773, 1033
AsuHPI GGTGA 4 cut(s) 20, 35, 62, 332
AsuNHI GCTAGC 1 cut(s) 236
AvaII GGWCC 1 cut(s) 773
AxyI CCTNAGG 2 cut(s) 942, 1158
BaeGI GKGCMC 2 cut(s) 611, 1203
BamHI GGATCC 1 cut(s) 1246
BanI GGYRCC 1 cut(s) 606
BanII GRGCYC 1 cut(s) 1491
BbsI GAAGAC 1 cut(s) 1445
Bbv12I GWGCWC 1 cut(s) 916
BbvI GCAGC 3 cut(s) 1303, 1324, 1589
BccI CCATC 4 cut(s) 148, 650, 1017, 1123
BceAI ACGGC 1 cut(s) 468
BciT130I CCWGG 2 cut(s) 332, 708
BclI TGATCA 3 cut(s) 205, 565, 697
BcoDI GTCTC 3 cut(s) 82, 168, 1423
BfaI CTAG 3 cut(s) 149, 237, 675
BfuAI ACCTGC 1 cut(s) 1403
BisI GCNGC 3 cut(s) 1317, 1338, 1578
BlpI GCTNAGC 1 cut(s) 990
BlsI GCNGC 3 cut(s) 1318, 1339, 1579
Bme1390I CCNGG 2 cut(s) 332, 708
Bme18I GGWCC 1 cut(s) 773
BmgT120I GGNCC 2 cut(s) 773, 1033
BmiI GGNNCC 3 cut(s) 608, 627, 1248
BmrFI CCNGG 2 cut(s) 332, 708
BmrI ACTGGG 1 cut(s) 970
BmsI GCATC 4 cut(s) 687, 845, 1409, 1513
BmtI GCTAGC 1 cut(s) 240
BmuI ACTGGG 1 cut(s) 970
BpiI GAAGAC 1 cut(s) 1445
BplI GAGNNNNNCTC 2 cut(s) 1495, 1527
Bpu10I CCTNAGC 1 cut(s) 516
Bpu1102I GCTNAGC 1 cut(s) 990
BpuEI CTTGAG 2 cut(s) 346, 1525
BsaBI GATNNNNATC 1 cut(s) 702
BsaJI CCNNGG 1 cut(s) 410
BsaWI WCCGGW 1 cut(s) 1193
BsaXI ACNNNNNCTCC 4 cut(s) 38, 62, 68, 92
Bsc4I CCNNNNNNNGG 2 cut(s) 542, 1309
Bse1I ACTGG 4 cut(s) 406, 965, 1303, 1359
Bse21I CCTNAGG 2 cut(s) 942, 1158
Bse3DI GCAATG 4 cut(s) 208, 256, 304, 984
Bse8I GATNNNNATC 1 cut(s) 702
BseAI TCCGGA 1 cut(s) 1193
BseBI CCWGG 2 cut(s) 332, 708
BseDI CCNNGG 1 cut(s) 410
BseGI GGATG 7 cut(s) 642, 703, 836, 1009, 1115, 1400, 1528
BseJI GATNNNNATC 1 cut(s) 702
BseLI CCNNNNNNNGG 2 cut(s) 542, 1309
BseMI GCAATG 4 cut(s) 208, 256, 304, 984
BseMII CTCAG 5 cut(s) 147, 855, 956, 1004, 1152
BseNI ACTGG 4 cut(s) 406, 965, 1303, 1359
BseRI GAGGAG 2 cut(s) 46, 57
BseSI GKGCMC 2 cut(s) 611, 1203
BseXI GCAGC 3 cut(s) 1303, 1324, 1589
Bsh1236I CGCG 2 cut(s) 104, 1310
BshFI GGCC 2 cut(s) 535, 1035
BshNI GGYRCC 1 cut(s) 606
BsiHKAI GWGCWC 1 cut(s) 916
BsiSI CCGG 1 cut(s) 1194
BslI CCNNNNNNNGG 2 cut(s) 542, 1309
BsmAI GTCTC 3 cut(s) 82, 168, 1423
BsmBI CGTCTC 1 cut(s) 168
BsnI GGCC 2 cut(s) 535, 1035
Bsp1286I GDGCHC 4 cut(s) 611, 916, 1203, 1491
Bsp13I TCCGGA 1 cut(s) 1193
Bsp1407I TGTACA 1 cut(s) 1054
Bsp1720I GCTNAGC 1 cut(s) 990
BspACI CCGC 6 cut(s) 34, 81, 124, 524, 1220, 1310
BspANI GGCC 2 cut(s) 535, 1035
BspCNI CTCAG 5 cut(s) 148, 854, 955, 1003, 1151
BspEI TCCGGA 1 cut(s) 1193
BspFNI CGCG 2 cut(s) 104, 1310
BspLI GGNNCC 3 cut(s) 608, 627, 1248
BspMI ACCTGC 1 cut(s) 1403
BspOI GCTAGC 1 cut(s) 240
BspPI GGATC 6 cut(s) 506, 1106, 1241, 1254, 1490, 1604
BspT107I GGYRCC 1 cut(s) 606
BsrDI GCAATG 4 cut(s) 208, 256, 304, 984
BsrGI TGTACA 1 cut(s) 1054
BsrI ACTGG 4 cut(s) 406, 965, 1303, 1359
BssECI CCNNGG 1 cut(s) 410
BssT1I CCWWGG 1 cut(s) 410
Bst2UI CCWGG 2 cut(s) 332, 708
Bst4CI ACNGT 3 cut(s) 439, 507, 1131
Bst6I CTCTTC 1 cut(s) 1588
BstAUI TGTACA 1 cut(s) 1054
BstC8I GCNNGC 5 cut(s) 108, 190, 238, 1069, 1335
BstENI CCTNNNNNAGG 1 cut(s) 540
BstF5I GGATG 7 cut(s) 642, 703, 836, 1009, 1115, 1400, 1528
BstFNI CGCG 2 cut(s) 104, 1310
BstHHI GCGC 1 cut(s) 106
BstMAI GTCTC 3 cut(s) 82, 168, 1423
BstMWI GCNNNNNNNGC 7 cut(s) 198, 246, 294, 484, 532, 1178, 1316
BstNI CCWGG 2 cut(s) 332, 708
BstNSI RCATGY 1 cut(s) 912
BstSCI CCNGG 2 cut(s) 330, 706
BstSLI GKGCMC 2 cut(s) 611, 1203
BstUI CGCG 2 cut(s) 104, 1310
BstV1I GCAGC 3 cut(s) 1303, 1324, 1589
BstV2I GAAGAC 1 cut(s) 1445
BstX2I RGATCY 2 cut(s) 498, 1246
BstYI RGATCY 2 cut(s) 498, 1246
Bsu36I CCTNAGG 2 cut(s) 942, 1158
BsuRI GGCC 2 cut(s) 535, 1035
BtsCI GGATG 7 cut(s) 642, 703, 836, 1009, 1115, 1400, 1528
BtsIMutI CAGTG 4 cut(s) 399, 1107, 1146, 1627
BveI ACCTGC 1 cut(s) 1403
Cac8I GCNNGC 5 cut(s) 108, 190, 238, 1069, 1335
CfoI GCGC 1 cut(s) 106
Cfr13I GGNCC 2 cut(s) 773, 1033
Csp6I GTAC 2 cut(s) 1055, 1532
CviAII CATG 7 cut(s) 74, 209, 257, 392, 654, 909, 1480
CviQI GTAC 2 cut(s) 1055, 1532
Eam1104I CTCTTC 1 cut(s) 1588
EarI CTCTTC 1 cut(s) 1588
EciI GGCGGA 2 cut(s) 23, 70
Eco130I CCWWGG 1 cut(s) 410
Eco24I GRGCYC 1 cut(s) 1491
Eco32I GATATC 1 cut(s) 601
Eco47I GGWCC 1 cut(s) 773
Eco57I CTGAAG 1 cut(s) 1603
Eco81I CCTNAGG 2 cut(s) 942, 1158
EcoNI CCTNNNNNAGG 1 cut(s) 540
EcoRII CCWGG 2 cut(s) 330, 706
EcoRV GATATC 1 cut(s) 601
EcoT14I CCWWGG 1 cut(s) 410
EcoT22I ATGCAT 1 cut(s) 1528
EcoT38I GRGCYC 1 cut(s) 1491
ErhI CCWWGG 1 cut(s) 410
Esp3I CGTCTC 1 cut(s) 168
FaeI CATG 7 cut(s) 77, 212, 260, 395, 657, 912, 1483
FalI AAGNNNNNCTT 2 cut(s) 1371, 1403
FatI CATG 7 cut(s) 73, 208, 256, 391, 653, 908, 1479
FauI CCCGC 1 cut(s) 131
FbaI TGATCA 3 cut(s) 205, 565, 697
FblI GTMKAC 2 cut(s) 434, 952
Fnu4HI GCNGC 3 cut(s) 1317, 1338, 1578
FokI GGATG 7 cut(s) 629, 690, 823, 996, 1102, 1387, 1535
FriOI GRGCYC 1 cut(s) 1491
Fsp4HI GCNGC 3 cut(s) 1317, 1338, 1578
FspBI CTAG 3 cut(s) 149, 237, 675
GlaI GCGC 1 cut(s) 105
GluI GCNGC 3 cut(s) 1317, 1338, 1578
HaeIII GGCC 2 cut(s) 535, 1035
HapII CCGG 1 cut(s) 1194
HhaI GCGC 1 cut(s) 106
Hin1II CATG 7 cut(s) 77, 212, 260, 395, 657, 912, 1483
Hin6I GCGC 1 cut(s) 104
HinP1I GCGC 1 cut(s) 104
HindIII AAGCTT 3 cut(s) 575, 879, 1346
HpaII CCGG 1 cut(s) 1194
HphI GGTGA 4 cut(s) 20, 35, 62, 332
Hpy166II GTNNAC 4 cut(s) 435, 776, 847, 953
Hpy188I TCNGA 9 cut(s) 145, 157, 173, 585, 683, 741, 897, 1296, 1447
Hpy188III TCNNGA 6 cut(s) 549, 563, 646, 1194, 1250, 1352
Hpy8I GTNNAC 4 cut(s) 435, 776, 847, 953
Hpy99I CGWCG 2 cut(s) 227, 1496
HpyCH4III ACNGT 3 cut(s) 439, 507, 1131
HpyCH4IV ACGT 2 cut(s) 431, 1429
HpyCH4V TGCA 7 cut(s) 478, 805, 1025, 1144, 1319, 1400, 1526
HpyF10VI GCNNNNNNNGC 7 cut(s) 198, 246, 294, 484, 532, 1178, 1316
HpySE526I ACGT 2 cut(s) 431, 1429
Hsp92II CATG 7 cut(s) 77, 212, 260, 395, 657, 912, 1483
HspAI GCGC 1 cut(s) 104
Kpn2I TCCGGA 1 cut(s) 1193
Ksp22I TGATCA 3 cut(s) 205, 565, 697
LmnI GCTCC 2 cut(s) 59, 725
Lsp1109I GCAGC 3 cut(s) 1303, 1324, 1589
LweI GCATC 4 cut(s) 687, 845, 1409, 1513
MaeI CTAG 3 cut(s) 149, 237, 675
MaeII ACGT 2 cut(s) 431, 1429
MaeIII GTNAC 2 cut(s) 320, 690
MboII GAAGA 8 cut(s) 696, 1388, 1450, 1605, 1655, 1658, 1659, 1662
MfeI CAATTG 1 cut(s) 569
MflI RGATCY 2 cut(s) 498, 1246
MhlI GDGCHC 4 cut(s) 611, 916, 1203, 1491
MlyI GAGTC 2 cut(s) 352, 1043
MmeI TCCRAC 2 cut(s) 175, 1388
MnlI CCTC 9 cut(s) 41, 67, 78, 546, 850, 951, 1129, 1190, 1564
Mph1103I ATGCAT 1 cut(s) 1528
MroI TCCGGA 1 cut(s) 1193
MroXI GAANNNNTTC 1 cut(s) 1257
MseI TTAA 6 cut(s) 791, 1005, 1082, 1151, 1226, 1391
MslI CAYNNNNRTG 1 cut(s) 1405
MspI CCGG 1 cut(s) 1194
MspR9I CCNGG 2 cut(s) 332, 708
MunI CAATTG 1 cut(s) 569
MvaI CCWGG 2 cut(s) 332, 708
MvnI CGCG 2 cut(s) 104, 1310
MwoI GCNNNNNNNGC 7 cut(s) 198, 246, 294, 484, 532, 1178, 1316
NheI GCTAGC 1 cut(s) 236
NlaIII CATG 7 cut(s) 77, 212, 260, 395, 657, 912, 1483
NlaIV GGNNCC 3 cut(s) 608, 627, 1248
NmuCI GTSAC 2 cut(s) 320, 690
NsiI ATGCAT 1 cut(s) 1528
NspI RCATGY 1 cut(s) 912
PaqCI CACCTGC 1 cut(s) 1403
PciI ACATGT 1 cut(s) 908
PdmI GAANNNNTTC 1 cut(s) 1257
PfeI GAWTC 9 cut(s) 152, 168, 179, 227, 275, 383, 716, 898, 1452
PfoI TCCNGGA 1 cut(s) 706
PkrI GCNGC 3 cut(s) 1318, 1339, 1579
PleI GAGTC 2 cut(s) 352, 1043
PpsI GAGTC 2 cut(s) 352, 1043
PscI ACATGT 1 cut(s) 908
Psp6I CCWGG 2 cut(s) 330, 706
PspGI CCWGG 2 cut(s) 330, 706
PspN4I GGNNCC 3 cut(s) 608, 627, 1248
PspPI GGNCC 2 cut(s) 773, 1033
PsuI RGATCY 2 cut(s) 498, 1246
RsaI GTAC 2 cut(s) 1056, 1533
RsaNI GTAC 2 cut(s) 1055, 1532
RseI CAYNNNNRTG 1 cut(s) 1405
SaqAI TTAA 6 cut(s) 791, 1005, 1082, 1151, 1226, 1391
SatI GCNGC 3 cut(s) 1317, 1338, 1578
Sau96I GGNCC 2 cut(s) 773, 1033
SchI GAGTC 2 cut(s) 352, 1043
ScrFI CCNGG 2 cut(s) 332, 708
SduI GDGCHC 4 cut(s) 611, 916, 1203, 1491
SfaNI GCATC 4 cut(s) 687, 845, 1409, 1513
SinI GGWCC 1 cut(s) 773
SmiMI CAYNNNNRTG 1 cut(s) 1405
SmlI CTYRAG 2 cut(s) 325, 1540
SmoI CTYRAG 2 cut(s) 325, 1540
SsiI CCGC 6 cut(s) 34, 81, 124, 524, 1220, 1310
SspMI CTAG 3 cut(s) 149, 237, 675
StyD4I CCNGG 2 cut(s) 330, 706
StyI CCWWGG 1 cut(s) 410
TaaI ACNGT 3 cut(s) 439, 507, 1131
TaiI ACGT 2 cut(s) 434, 1432
TaqI TCGA 4 cut(s) 166, 222, 1121, 1383
TaqII GACCGA 1 cut(s) 764
TatI WGTACW 1 cut(s) 1054
TfiI GAWTC 9 cut(s) 152, 168, 179, 227, 275, 383, 716, 898, 1452
Tru1I TTAA 6 cut(s) 791, 1005, 1082, 1151, 1226, 1391
Tru9I TTAA 6 cut(s) 791, 1005, 1082, 1151, 1226, 1391
TscAI CASTG 4 cut(s) 406, 1114, 1146, 1627
TseFI GTSAC 2 cut(s) 320, 690
TseI GCWGC 3 cut(s) 1316, 1337, 1577
Tsp45I GTSAC 2 cut(s) 320, 690
TspDTI ATGAA 7 cut(s) 375, 642, 918, 1110, 1496, 1662, 1686
TspGWI ACGGA 2 cut(s) 496, 881
TspRI CASTG 4 cut(s) 406, 1114, 1146, 1627
VpaK11BI GGWCC 1 cut(s) 773
XagI CCTNNNNNAGG 1 cut(s) 540
XapI RAATTY 3 cut(s) 742, 753, 860
XceI RCATGY 1 cut(s) 912
XcmI CCANNNNNNNNNTGG 1 cut(s) 398
XmiI GTMKAC 2 cut(s) 434, 952
XmnI GAANNNNTTC 1 cut(s) 1257
XspI CTAG 3 cut(s) 149, 237, 675
Zsp2I ATGCAT 1 cut(s) 1528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.