Rmu_sc0005582.1_g000001

ALBINO3-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005582.1
Physical Location & Seq
Forward (+)
1 .. 860
860 bp
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UTR
Exon/CDS
Intron
Rmu_sc0005582.1_g000001.1.cds

Sequence Viewer

Length: 399 bp
atctttattgctggtcatccgacaaaagcagaggacattgataatctaattgttgcatctcagtgggctggtagcgcctacatacgacagggaaaaatggaggaagggattgtacaccttgaaagaattgcacagttggaagagccagatgaaccaaagagcaaagctcattattttgatgggttgttaatgctggcaagtgctctatcaaatgtgggtcgcaaggatgaagctttaaagcatctgcgcttggctgctgcttctaatcctgcttacaaggagtacttggaacaatgtaaaaatatggatgacagtgttgtcagtggtaataggaaagtccagcaagacagaagaaaattgggcaacaagaagaaagacaagaaaaagaagaattgctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

132

Amino Acids

14.85

Weight (kDa)

9.19

Isoelectric Point (pI)

32.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 317
AfaI GTAC 2 cut(s) 114, 284
AgsI TTSAA 1 cut(s) 122
AluBI AGCT 2 cut(s) 167, 233
AluI AGCT 2 cut(s) 167, 233
Alw21I GWGCWC 1 cut(s) 205
ApeKI GCWGC 2 cut(s) 254, 257
AspLEI GCGC 2 cut(s) 77, 249
BarI GAAGNNNNNNTAC 2 cut(s) 96, 128
Bbv12I GWGCWC 1 cut(s) 205
BbvI GCAGC 2 cut(s) 241, 244
BccI CCATC 1 cut(s) 173
BfaI CTAG 1 cut(s) 397
BfoI RGCGCY 1 cut(s) 78
BisI GCNGC 2 cut(s) 255, 258
BlsI GCNGC 2 cut(s) 256, 259
BmcAI AGTACT 1 cut(s) 284
BmsI GCATC 2 cut(s) 65, 250
BplI GAGNNNNNCTC 2 cut(s) 151, 183
BseGI GGATG 3 cut(s) 16, 232, 313
BseMII CTCAG 1 cut(s) 74
BseXI GCAGC 2 cut(s) 241, 244
BsiHKAI GWGCWC 1 cut(s) 205
Bsp1286I GDGCHC 1 cut(s) 205
Bsp1407I TGTACA 1 cut(s) 112
BspCNI CTCAG 1 cut(s) 73
BspQI GCTCTTC 1 cut(s) 135
BsrGI TGTACA 1 cut(s) 112
Bst4CI ACNGT 2 cut(s) 135, 314
Bst6I CTCTTC 1 cut(s) 135
BstAUI TGTACA 1 cut(s) 112
BstC8I GCNNGC 1 cut(s) 195
BstDEI CTNAG 1 cut(s) 60
BstF5I GGATG 3 cut(s) 16, 232, 313
BstH2I RGCGCY 1 cut(s) 78
BstHHI GCGC 2 cut(s) 77, 249
BstMWI GCNNNNNNNGC 1 cut(s) 74
BstV1I GCAGC 2 cut(s) 241, 244
BtsCI GGATG 3 cut(s) 16, 232, 313
BtsIMutI CAGTG 3 cut(s) 68, 319, 328
Cac8I GCNNGC 1 cut(s) 195
CfoI GCGC 2 cut(s) 77, 249
Csp6I GTAC 2 cut(s) 113, 283
CviJI RGCY 5 cut(s) 68, 145, 167, 233, 254
CviKI_1 RGCY 5 cut(s) 68, 145, 167, 233, 254
CviQI GTAC 2 cut(s) 113, 283
DdeI CTNAG 1 cut(s) 60
DraI TTTAAA 1 cut(s) 237
DrdI GACNNNNNNGTC 1 cut(s) 317
DseDI GACNNNNNNGTC 1 cut(s) 317
Eam1104I CTCTTC 1 cut(s) 135
EarI CTCTTC 1 cut(s) 135
FaiI YATR 2 cut(s) 83, 305
FalI AAGNNNNNCTT 2 cut(s) 269, 301
Fnu4HI GCNGC 2 cut(s) 255, 258
FokI GGATG 3 cut(s) 3, 239, 320
Fsp4HI GCNGC 2 cut(s) 255, 258
FspBI CTAG 1 cut(s) 397
GlaI GCGC 2 cut(s) 76, 248
GluI GCNGC 2 cut(s) 255, 258
HaeII RGCGCY 1 cut(s) 78
HhaI GCGC 2 cut(s) 77, 249
Hin6I GCGC 2 cut(s) 75, 247
HinP1I GCGC 2 cut(s) 75, 247
HindIII AAGCTT 1 cut(s) 231
Hpy166II GTNNAC 1 cut(s) 115
Hpy188I TCNGA 1 cut(s) 21
Hpy8I GTNNAC 1 cut(s) 115
HpyAV CCTTC 1 cut(s) 98
HpyCH4III ACNGT 2 cut(s) 135, 314
HpyCH4V TGCA 2 cut(s) 56, 131
HpyF10VI GCNNNNNNNGC 1 cut(s) 74
HpyF3I CTNAG 1 cut(s) 60
HspAI GCGC 2 cut(s) 75, 247
LguI GCTCTTC 1 cut(s) 135
LpnPI CCDG 6 cut(s) 54, 74, 159, 179, 282, 353
Lsp1109I GCAGC 2 cut(s) 241, 244
LweI GCATC 2 cut(s) 65, 250
MaeI CTAG 1 cut(s) 397
MboII GAAGA 3 cut(s) 152, 363, 382
MhlI GDGCHC 1 cut(s) 205
MluCI AATT 4 cut(s) 48, 126, 356, 391
MmeI TCCRAC 2 cut(s) 44, 117
MnlI CCTC 2 cut(s) 25, 94
MseI TTAA 2 cut(s) 188, 236
MslI CAYNNNNRTG 1 cut(s) 61
MwoI GCNNNNNNNGC 1 cut(s) 74
PciSI GCTCTTC 1 cut(s) 135
PkrI GCNGC 2 cut(s) 256, 259
RsaI GTAC 2 cut(s) 114, 284
RsaNI GTAC 2 cut(s) 113, 283
RseI CAYNNNNRTG 1 cut(s) 61
SapI GCTCTTC 1 cut(s) 135
SaqAI TTAA 2 cut(s) 188, 236
SatI GCNGC 2 cut(s) 255, 258
ScaI AGTACT 1 cut(s) 284
SduI GDGCHC 1 cut(s) 205
SetI ASST 3 cut(s) 120, 169, 235
SfaNI GCATC 2 cut(s) 65, 250
SmiMI CAYNNNNRTG 1 cut(s) 61
Sse9I AATT 4 cut(s) 48, 126, 356, 391
SspMI CTAG 1 cut(s) 397
TaaI ACNGT 2 cut(s) 135, 314
TasI AATT 4 cut(s) 48, 126, 356, 391
TatI WGTACW 2 cut(s) 112, 282
Tru1I TTAA 2 cut(s) 188, 236
Tru9I TTAA 2 cut(s) 188, 236
TscAI CASTG 3 cut(s) 68, 319, 328
TseI GCWGC 2 cut(s) 254, 257
TspDTI ATGAA 2 cut(s) 165, 243
TspRI CASTG 3 cut(s) 68, 319, 328
XspI CTAG 1 cut(s) 397
ZrmI AGTACT 1 cut(s) 284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.