Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002294

Physical Location & Seq

Genomic Coordinates Forward (+)

17152460 .. 17156240

Gene Structure 3781 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G46590.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGGTGTCACATAAAGTCTTAGAATTTGGAGATGATGGTTACAAATTACCTGCTCAAGCTCGAGCTCCGAGATCACTCCGGAAGCGCATTTACGAAAAGAAGATACCAGGAGATGATAAGATGTGCGCGATTGACTTATTGGCCACCGTAGCTGGAAGCTTGCTTCTCGAGAGCAAAAGTCCGGTAAACGCGTGTCTAGTTGTACAAAATACTGTAAAGAATGAATACCCGGCTGATGAAAACCCCGTAAAGGCGGTTCCTTATTCGGAATCCCCGAGCCTATTTGACAATGGCAAGTGTGGATTTAGCTCTGTGATAACAAATCCTAATCACTTGTTGGTAGGTGACAAAGTAGGAAAGGAGGTGGAGGGTTTTAGTAGTTTGGGTGTGAGTGGTGATGTAAAGCCTGATGTTGTAGCTAGTATAGGTAGTAACAGTAGTACCGAGGTGGGAGCATGTGGGAACGGTAGTCCCAACGAGTCTCGGGATGATGTAAATTTGTTTAGTAGAAATGATGATGATGAAAACTTTTCGGGTTACATTCGAACTCGTATGACTAGGCCTGTGCCTCGTATTGGAGACAGAAGAATTAGGAAGATATTGGCATCTAGACATTGGAAAGGAGGTTCGAAGAACAACACAGATGCAAAGCCATGGTATTGCTCAAAGAGGAGTTATTACTTGCACCATCATCAGAGGAGTTATCCCATCAAGAAAAGGAAATACTTTGACAGTGTTTACGACTCGAACTCTGATGATTACCGTTTGCAAGGAAAGACTCATAAAGGAAGCAGAACAATATCTTCCATGAAAAGTCGAAATGCGTCCTTTGTGTCAAGGGATCATCATGTGAAGCTGCGGATCAAGTCTTTTAGGGTGCCTGAGCTTTTCGTAGAGATTCCAGAAACTGCTACTGTTGGCTCCTTGAAGCGGATGGTGATGGAAGCAGTGACCACCATACTGGGTGATGGACTTCGAGTCGGGCTGATGGTTCAAGGAAAGAAAGTCCGAGATGATGGCAAAACTCTTCTTCAGACTGGGATCTCTGAGGAGAACAACCACTTGGATTCTCTTGGTTTCAGCCTTGAACCTAGCTTAGAGACCACCCCTCAACCACTGTTATCCAGTTATCTGTCAGATCATGCCTGTGATGATGTGACGTTATGCCACGACAATGCGTTGGATTCTAGTCATGAGCCAGAACCATCCCCAGCTGACTCATTTGGGAAACTAGGCACAAGTGATCATTCTAGAGCTTTGATTCCTGTTGCCTCAGCAGCAATGCTGGCTCCTCGGCCTCCTAACCGTAAGTTTAAAAGGACTGAGCAGCAGCTAGCTGCACAACGCAGAATTCGTCGACCTTTCTCAGTTACTGAAGTAGAAGCACTGGTCCAAGCCGTTGAGAAACTCGGAACCGGAAGGTGGAGAGATGTGAAGGTTCGTGCTTTCGAGGACGCAGACCATCGTACCTATGTTGATCTCAAGGATAAGTGGAAGACGCTGGTCCACACGGCAAGGATATCTCCACAACAGCGGAGAGGAGAGCCGGTGCCACAGGAACTTCTGGACCGTGTTTTGAAGGCACACGCTTACTGGTCACAACACCTAATGCATCAACTGCAGACTGAGCCACCATCCACTCAGGTAGAGGCTCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0000228 GO:0000723 GO:0000781 GO:0000782 GO:0000783 GO:0000784 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003691 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005694 GO:0005737 GO:0005886 GO:0006139 GO:0006259 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008301 GO:0009628 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009737 GO:0009739 GO:0009751 GO:0009753 GO:0009755 GO:0009873 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0012505 GO:0014070 GO:0016020 GO:0016043 GO:0023052 GO:0031090 GO:0031627 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032200 GO:0032870 GO:0032991 GO:0032993 GO:0033993 GO:0034641 GO:0035556 GO:0042162 GO:0042221 GO:0042493 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0046677 GO:0046686 GO:0050789 GO:0050794 GO:0050896 GO:0051276 GO:0051716 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0070887 GO:0071310 GO:0071369 GO:0071495 GO:0071704 GO:0071840 GO:0071944 GO:0090304 GO:0097159 GO:0097305 GO:0098687 GO:1901360 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

552

Amino Acids

61.65

Weight (kDa)

9.16

Isoelectric Point (pI)

49.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ubiquitin_TPR1	PF23603	284 - 351	1.4e-37	Telomere repeat-binding protein 1-like, ubiquitin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002294)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07540 AT3G46590 AT3G46590 AT3G46590 AT3G46590 AT3G46590 AT5G59430 AT5G59430 AT5G59430 AT5G59430 AT5G59430
fragaria_vesca	FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520
malus_domestica	MD03G1089900.v1.1 MD11G1099200.v1.1
prunus_persica	Prupe.6G074100_v2.0.a1 Prupe.6G074100_v2.0.a1
pyrus_communis	pycom03g07150 pycom11g08340
rosa_chinensis	RchiOBHm_Chr5g0065391 RchiOBHm_Chr5g0065401 RchiOBHm_Chr5g0065451
rosa_laevigata	RLG00000035788
rosa_multiflora	Rmu_sc0001010.1_g000092
rosa_roxburghii	Rroxscaffold_1G00015800
rosa_rugosa	Rorug05G0371900 Rorug05G0372000 Rorug05G0372100 Rorug05G0372100
rosa_samantha	Rh5AG429700 Rh5BG444900 Rh5CG467200 Rh5DG457400
rosa_wichuraiana	Rw5G040330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	58
AccB1I	GGYRCC	2 cut(s)	877, 1549
AccI	GTMKAC	1 cut(s)	1357
AccII	CGCG	2 cut(s)	128, 191
AccIII	TCCGGA	1 cut(s)	78
AciI	CCGC	4 cut(s)	254, 859, 931, 1534
AclWI	GGATC	3 cut(s)	849, 869, 1049
AcoI	YGGCCR	1 cut(s)	141
AcsI	RAATTY	3 cut(s)	23, 496, 1350
AcuI	CTGAAG	2 cut(s)	1016, 1395
AfaI	GTAC	3 cut(s)	204, 442, 1468
AfiI	CCNNNNNNNGG	4 cut(s)	250, 575, 930, 1422
AflIII	ACRYGT	1 cut(s)	189
AgsI	TTSAA	4 cut(s)	928, 995, 1088, 1579
AhdI	GACNNNNNGTC	1 cut(s)	977
AjnI	CCWGG	1 cut(s)	106
AjuI	GAANNNNNNNTTGG	2 cut(s)	1046, 1078
AloI	GAACNNNNNNTCC	2 cut(s)	610, 642
Alw21I	GWGCWC	1 cut(s)	67
Alw26I	GTCTC	3 cut(s)	486, 573, 1094
AlwI	GGATC	3 cut(s)	849, 869, 1049
AlwNI	CAGNNNCTG	2 cut(s)	908, 1373
Ama87I	CYCGRG	4 cut(s)	60, 167, 274, 483
Aor13HI	TCCGGA	1 cut(s)	78
AoxI	GGCC	3 cut(s)	141, 560, 1295
ApeKI	GCWGC	5 cut(s)	856, 1277, 1327, 1330, 1337
ApoI	RAATTY	3 cut(s)	23, 496, 1350
AspLEI	GCGC	2 cut(s)	87, 128
AspS9I	GGNCC	3 cut(s)	1390, 1504, 1567
AsuC2I	CCSGG	1 cut(s)	230
AsuHPI	GGTGA	4 cut(s)	356, 407, 949, 977
AsuII	TTCGAA	2 cut(s)	544, 629
AsuNHI	GCTAGC	1 cut(s)	1333
AvaI	CYCGRG	4 cut(s)	60, 167, 274, 483
AvaII	GGWCC	3 cut(s)	1390, 1504, 1567
BaeI	ACNNNNGTAYC	4 cut(s)	424, 457, 1450, 1483
BalI	TGGCCA	1 cut(s)	143
BanI	GGYRCC	2 cut(s)	877, 1549
BanII	GRGCYC	1 cut(s)	67
BarI	GAAGNNNNNNTAC	2 cut(s)	74, 106
BbsI	GAAGAC	1 cut(s)	1502
Bbv12I	GWGCWC	1 cut(s)	67
BbvCI	CCTCAGC	1 cut(s)	1273
BbvI	GCAGC	5 cut(s)	843, 1289, 1324, 1339, 1342
BceAI	ACGGC	2 cut(s)	1382, 1527
BciT130I	CCWGG	1 cut(s)	108
BclI	TGATCA	1 cut(s)	1243
BcnI	CCSGG	1 cut(s)	230
BcoDI	GTCTC	3 cut(s)	486, 573, 1094
BfaI	CTAG	9 cut(s)	197, 420, 558, 609, 1092, 1188, 1232, 1251, 1334
BfmI	CTRYAG	1 cut(s)	1619
BfuAI	ACCTGC	1 cut(s)	58
BisI	GCNGC	5 cut(s)	857, 1278, 1328, 1331, 1338
BlsI	GCNGC	5 cut(s)	858, 1279, 1329, 1332, 1339
Bme1390I	CCNGG	2 cut(s)	108, 230
Bme18I	GGWCC	3 cut(s)	1390, 1504, 1567
BmeRI	GACNNNNNGTC	1 cut(s)	977
BmeT110I	CYCGRG	4 cut(s)	60, 167, 274, 483
BmgT120I	GGNCC	3 cut(s)	1390, 1504, 1567
BmiI	GGNNCC	6 cut(s)	258, 879, 922, 1290, 1414, 1551
BmrFI	CCNGG	2 cut(s)	108, 230
BmrI	ACTGGG	2 cut(s)	971, 1047
BmsI	GCATC	3 cut(s)	614, 634, 1621
BmtI	GCTAGC	1 cut(s)	1337
BmuI	ACTGGG	2 cut(s)	971, 1047
BoxI	GACNNNNGTC	1 cut(s)	1502
BpiI	GAAGAC	1 cut(s)	1502
Bpu10I	CCTNAGC	2 cut(s)	882, 1273
Bpu14I	TTCGAA	2 cut(s)	544, 629
BpuEI	CTTGAG	2 cut(s)	39, 1466
BpuMI	CCSGG	1 cut(s)	230
BsaI	GGTCTC	1 cut(s)	1094
BsaJI	CCNNGG	3 cut(s)	444, 653, 1292
BsaWI	WCCGGW	3 cut(s)	78, 181, 1415
BsaXI	ACNNNNNCTCC	2 cut(s)	1533, 1563
Bsc4I	CCNNNNNNNGG	4 cut(s)	250, 575, 930, 1422
Bse118I	RCCGGY	1 cut(s)	1546
Bse1I	ACTGG	5 cut(s)	966, 1042, 1125, 1392, 1598
Bse3DI	GCAATG	1 cut(s)	1287
BseAI	TCCGGA	1 cut(s)	78
BseBI	CCWGG	1 cut(s)	108
BseDI	CCNNGG	3 cut(s)	444, 653, 1292
BseGI	GGATG	4 cut(s)	493, 939, 1205, 1634
BseLI	CCNNNNNNNGG	4 cut(s)	250, 575, 930, 1422
BseMI	GCAATG	1 cut(s)	1287
BseMII	CTCAG	7 cut(s)	873, 1038, 1287, 1314, 1380, 1617, 1655
BseNI	ACTGG	5 cut(s)	966, 1042, 1125, 1392, 1598
BseRI	GAGGAG	5 cut(s)	685, 712, 1064, 1281, 1554
BseXI	GCAGC	5 cut(s)	843, 1289, 1324, 1339, 1342
BseYI	CCCAGC	1 cut(s)	1210
BsgI	GTGCAG	1 cut(s)	1323
Bsh1236I	CGCG	2 cut(s)	128, 191
BshFI	GGCC	3 cut(s)	143, 562, 1297
BshNI	GGYRCC	2 cut(s)	877, 1549
BsiHKAI	GWGCWC	1 cut(s)	67
BsiHKCI	CYCGRG	4 cut(s)	60, 167, 274, 483
BsiSI	CCGG	5 cut(s)	79, 182, 230, 1416, 1547
BslFI	GGGAC	1 cut(s)	456
BslI	CCNNNNNNNGG	4 cut(s)	250, 575, 930, 1422
BsmAI	GTCTC	3 cut(s)	486, 573, 1094
BsmFI	GGGAC	1 cut(s)	456
BsnI	GGCC	3 cut(s)	143, 562, 1297
Bso31I	GGTCTC	1 cut(s)	1094
BsoBI	CYCGRG	4 cut(s)	60, 167, 274, 483
Bsp119I	TTCGAA	2 cut(s)	544, 629
Bsp1286I	GDGCHC	1 cut(s)	67
Bsp13I	TCCGGA	1 cut(s)	78
Bsp1407I	TGTACA	1 cut(s)	202
Bsp143I	GATC	7 cut(s)	71, 841, 861, 1041, 1138, 1243, 1477
Bsp19I	CCATGG	1 cut(s)	653
BspACI	CCGC	4 cut(s)	254, 859, 931, 1534
BspANI	GGCC	3 cut(s)	143, 562, 1297
BspCNI	CTCAG	7 cut(s)	874, 1039, 1286, 1315, 1379, 1618, 1654
BspEI	TCCGGA	1 cut(s)	78
BspFNI	CGCG	2 cut(s)	128, 191
BspHI	TCATGA	1 cut(s)	1192
BspLI	GGNNCC	6 cut(s)	258, 879, 922, 1290, 1414, 1551
BspMAI	CTGCAG	1 cut(s)	1623
BspMI	ACCTGC	1 cut(s)	58
BspOI	GCTAGC	1 cut(s)	1337
BspPI	GGATC	3 cut(s)	849, 869, 1049
BspT104I	TTCGAA	2 cut(s)	544, 629
BspT107I	GGYRCC	2 cut(s)	877, 1549
BspTNI	GGTCTC	1 cut(s)	1094
BsrDI	GCAATG	1 cut(s)	1287
BsrFI	RCCGGY	1 cut(s)	1546
BsrGI	TGTACA	1 cut(s)	202
BsrI	ACTGG	5 cut(s)	966, 1042, 1125, 1392, 1598
BssAI	RCCGGY	1 cut(s)	1546
BssECI	CCNNGG	3 cut(s)	444, 653, 1292
BssMI	GATC	7 cut(s)	71, 841, 861, 1041, 1138, 1243, 1477
BssT1I	CCWWGG	1 cut(s)	653
Bst2UI	CCWGG	1 cut(s)	108
Bst6I	CTCTTC	1 cut(s)	1032
BstAPI	GCANNNNNTGC	1 cut(s)	1618
BstAUI	TGTACA	1 cut(s)	202
BstBI	TTCGAA	2 cut(s)	544, 629
BstC8I	GCNNGC	3 cut(s)	161, 1287, 1335
BstDEI	CTNAG	9 cut(s)	19, 882, 1047, 1096, 1273, 1323, 1366, 1626, 1641
BstDSI	CCRYGG	1 cut(s)	653
BstF5I	GGATG	4 cut(s)	493, 939, 1205, 1634
BstFNI	CGCG	2 cut(s)	128, 191
BstHHI	GCGC	2 cut(s)	87, 128
BstKTI	GATC	7 cut(s)	74, 844, 864, 1044, 1141, 1246, 1480
BstMAI	GTCTC	3 cut(s)	486, 573, 1094
BstMBI	GATC	7 cut(s)	71, 841, 861, 1041, 1138, 1243, 1477
BstMWI	GCNNNNNNNGC	5 cut(s)	149, 1277, 1286, 1618, 1627
BstNI	CCWGG	1 cut(s)	108
BstNSI	RCATGY	1 cut(s)	459
BstPAI	GACNNNNGTC	1 cut(s)	1502
BstSCI	CCNGG	2 cut(s)	106, 228
BstSFI	CTRYAG	1 cut(s)	1619
BstUI	CGCG	2 cut(s)	128, 191
BstV1I	GCAGC	5 cut(s)	843, 1289, 1324, 1339, 1342
BstV2I	GAAGAC	1 cut(s)	1502
BstX2I	RGATCY	1 cut(s)	1041
BstXI	CCANNNNNNTGG	1 cut(s)	961
BstYI	RGATCY	1 cut(s)	1041
BsuRI	GGCC	3 cut(s)	143, 562, 1297
BtgI	CCRYGG	1 cut(s)	653
BtsCI	GGATG	4 cut(s)	493, 939, 1205, 1634
BtsI	GCAGTG	1 cut(s)	954
BtsIMutI	CAGTG	4 cut(s)	739, 954, 1115, 1385
BveI	ACCTGC	1 cut(s)	58
Cac8I	GCNNGC	3 cut(s)	161, 1287, 1335
CaiI	CAGNNNCTG	2 cut(s)	908, 1373
CciI	TCATGA	1 cut(s)	1192
CfoI	GCGC	2 cut(s)	87, 128
Cfr10I	RCCGGY	1 cut(s)	1546
Cfr13I	GGNCC	3 cut(s)	1390, 1504, 1567
CseI	GACGC	3 cut(s)	813, 1463, 1507
Csp6I	GTAC	3 cut(s)	203, 441, 1467
CviAII	CATG	6 cut(s)	456, 654, 808, 848, 1142, 1193
CviQI	GTAC	3 cut(s)	203, 441, 1467
DdeI	CTNAG	9 cut(s)	19, 882, 1047, 1096, 1273, 1323, 1366, 1626, 1641
DpnI	GATC	7 cut(s)	73, 843, 863, 1043, 1140, 1245, 1479
DpnII	GATC	7 cut(s)	71, 841, 861, 1041, 1138, 1243, 1477
DraI	TTTAAA	1 cut(s)	1315
DriI	GACNNNNNGTC	1 cut(s)	977
EaeI	YGGCCR	1 cut(s)	141
Eam1104I	CTCTTC	1 cut(s)	1032
Eam1105I	GACNNNNNGTC	1 cut(s)	977
EarI	CTCTTC	1 cut(s)	1032
Ecl136II	GAGCTC	1 cut(s)	65
Eco130I	CCWWGG	1 cut(s)	653
Eco147I	AGGCCT	1 cut(s)	562
Eco24I	GRGCYC	1 cut(s)	67
Eco31I	GGTCTC	1 cut(s)	1094
Eco32I	GATATC	1 cut(s)	1521
Eco47I	GGWCC	3 cut(s)	1390, 1504, 1567
Eco53kI	GAGCTC	1 cut(s)	65
Eco57I	CTGAAG	2 cut(s)	1016, 1395
Eco88I	CYCGRG	4 cut(s)	60, 167, 274, 483
EcoICRI	GAGCTC	1 cut(s)	65
EcoRI	GAATTC	1 cut(s)	1350
EcoRII	CCWGG	1 cut(s)	106
EcoRV	GATATC	1 cut(s)	1521
EcoT14I	CCWWGG	1 cut(s)	653
EcoT22I	ATGCAT	1 cut(s)	1614
EcoT38I	GRGCYC	1 cut(s)	67
ErhI	CCWWGG	1 cut(s)	653
FaeI	CATG	6 cut(s)	459, 657, 811, 851, 1145, 1196
FaqI	GGGAC	1 cut(s)	456
FatI	CATG	6 cut(s)	455, 653, 807, 847, 1141, 1192
FbaI	TGATCA	1 cut(s)	1243
FblI	GTMKAC	1 cut(s)	1357
Fnu4HI	GCNGC	5 cut(s)	857, 1278, 1328, 1331, 1338
FokI	GGATG	4 cut(s)	500, 946, 1192, 1621
FriOI	GRGCYC	1 cut(s)	67
Fsp4HI	GCNGC	5 cut(s)	857, 1278, 1328, 1331, 1338
FspBI	CTAG	9 cut(s)	197, 420, 558, 609, 1092, 1188, 1232, 1251, 1334
GlaI	GCGC	2 cut(s)	86, 127
GluI	GCNGC	5 cut(s)	857, 1278, 1328, 1331, 1338
GsaI	CCCAGC	1 cut(s)	1214
HaeIII	GGCC	3 cut(s)	143, 562, 1297
HapII	CCGG	5 cut(s)	79, 182, 230, 1416, 1547
HgaI	GACGC	3 cut(s)	813, 1463, 1507
HhaI	GCGC	2 cut(s)	87, 128
Hin1II	CATG	6 cut(s)	459, 657, 811, 851, 1145, 1196
Hin6I	GCGC	2 cut(s)	85, 126
HinP1I	GCGC	2 cut(s)	85, 126
HincII	GTYRAC	1 cut(s)	1358
HindII	GTYRAC	1 cut(s)	1358
HindIII	AAGCTT	1 cut(s)	157
HpaII	CCGG	5 cut(s)	79, 182, 230, 1416, 1547
HphI	GGTGA	4 cut(s)	356, 407, 949, 977
Hpy166II	GTNNAC	4 cut(s)	187, 739, 1358, 1507
Hpy188I	TCNGA	9 cut(s)	69, 268, 696, 754, 1010, 1035, 1048, 1138, 1412
Hpy8I	GTNNAC	4 cut(s)	187, 739, 1358, 1507
Hpy99I	CGWCG	1 cut(s)	1359
HpyAV	CCTTC	3 cut(s)	1413, 1429, 1573
HpyCH4IV	ACGT	1 cut(s)	1160
HpyCH4V	TGCA	6 cut(s)	647, 685, 769, 1340, 1612, 1621
HpyF10VI	GCNNNNNNNGC	5 cut(s)	149, 1277, 1286, 1618, 1627
HpyF3I	CTNAG	9 cut(s)	19, 882, 1047, 1096, 1273, 1323, 1366, 1626, 1641
HpySE526I	ACGT	1 cut(s)	1160
Hsp92II	CATG	6 cut(s)	459, 657, 811, 851, 1145, 1196
HspAI	GCGC	2 cut(s)	85, 126
Kpn2I	TCCGGA	1 cut(s)	78
Ksp22I	TGATCA	1 cut(s)	1243
Kzo9I	GATC	7 cut(s)	71, 841, 861, 1041, 1138, 1243, 1477
LmnI	GCTCC	4 cut(s)	70, 452, 926, 1294
Lsp1109I	GCAGC	5 cut(s)	843, 1289, 1324, 1339, 1342
LweI	GCATC	3 cut(s)	614, 634, 1621
MaeI	CTAG	9 cut(s)	197, 420, 558, 609, 1092, 1188, 1232, 1251, 1334
MaeII	ACGT	1 cut(s)	1160
MaeIII	GTNAC	9 cut(s)	6, 38, 344, 431, 536, 949, 1156, 1369, 1596
MalI	GATC	7 cut(s)	73, 843, 863, 1043, 1140, 1245, 1479
MboI	GATC	7 cut(s)	71, 841, 861, 1041, 1138, 1243, 1477
MboII	GAAGA	8 cut(s)	112, 597, 607, 643, 795, 1019, 1022, 1507
MflI	RGATCY	1 cut(s)	1041
MhlI	GDGCHC	1 cut(s)	67
MlsI	TGGCCA	1 cut(s)	143
MluCI	AATT	5 cut(s)	23, 44, 496, 588, 1350
MluI	ACGCGT	1 cut(s)	189
MluNI	TGGCCA	1 cut(s)	143
MlyI	GAGTC	5 cut(s)	488, 737, 772, 987, 1211
MmeI	TCCRAC	1 cut(s)	1161
Mox20I	TGGCCA	1 cut(s)	143
Mph1103I	ATGCAT	1 cut(s)	1614
MroI	TCCGGA	1 cut(s)	78
MscI	TGGCCA	1 cut(s)	143
MseI	TTAA	1 cut(s)	1314
MslI	CAYNNNNRTG	2 cut(s)	1146, 1173
Msp20I	TGGCCA	1 cut(s)	143
MspA1I	CMGCKG	2 cut(s)	1214, 1534
MspI	CCGG	5 cut(s)	79, 182, 230, 1416, 1547
MspR9I	CCNGG	2 cut(s)	108, 230
MvaI	CCWGG	1 cut(s)	108
MvnI	CGCG	2 cut(s)	128, 191
MwoI	GCNNNNNNNGC	5 cut(s)	149, 1277, 1286, 1618, 1627
NciI	CCSGG	1 cut(s)	230
NcoI	CCATGG	1 cut(s)	653
NdeII	GATC	7 cut(s)	71, 841, 861, 1041, 1138, 1243, 1477
NheI	GCTAGC	1 cut(s)	1333
NlaIII	CATG	6 cut(s)	459, 657, 811, 851, 1145, 1196
NlaIV	GGNNCC	6 cut(s)	258, 879, 922, 1290, 1414, 1551
NmeAIII	GCCGAG	1 cut(s)	1273
NmuCI	GTSAC	5 cut(s)	6, 344, 949, 1156, 1596
NsiI	ATGCAT	1 cut(s)	1614
NspI	RCATGY	1 cut(s)	459
NspV	TTCGAA	2 cut(s)	544, 629
PaeR7I	CTCGAG	2 cut(s)	60, 167
PagI	TCATGA	1 cut(s)	1192
PceI	AGGCCT	1 cut(s)	562
PcsI	WCGNNNNNNNCGW	2 cut(s)	272, 1351
PfeI	GAWTC	5 cut(s)	269, 898, 1067, 1184, 1261
PkrI	GCNGC	5 cut(s)	858, 1279, 1329, 1332, 1339
PleI	GAGTC	5 cut(s)	487, 737, 772, 986, 1211
PpsI	GAGTC	5 cut(s)	487, 737, 772, 986, 1211
PshAI	GACNNNNGTC	1 cut(s)	1502
Psp124BI	GAGCTC	1 cut(s)	67
Psp6I	CCWGG	1 cut(s)	106
PspFI	CCCAGC	1 cut(s)	1210
PspGI	CCWGG	1 cut(s)	106
PspN4I	GGNNCC	6 cut(s)	258, 879, 922, 1290, 1414, 1551
PspPI	GGNCC	3 cut(s)	1390, 1504, 1567
PspXI	VCTCGAGB	1 cut(s)	60
PsrI	GAACNNNNNNTAC	2 cut(s)	240, 272
PstI	CTGCAG	1 cut(s)	1623
PstNI	CAGNNNCTG	2 cut(s)	908, 1373
PsuI	RGATCY	1 cut(s)	1041
PvuII	CAGCTG	1 cut(s)	1214
RsaI	GTAC	3 cut(s)	204, 442, 1468
RsaNI	GTAC	3 cut(s)	203, 441, 1467
RseI	CAYNNNNRTG	2 cut(s)	1146, 1173
SacI	GAGCTC	1 cut(s)	67
SalI	GTCGAC	1 cut(s)	1356
SaqAI	TTAA	1 cut(s)	1314
SatI	GCNGC	5 cut(s)	857, 1278, 1328, 1331, 1338
Sau3AI	GATC	7 cut(s)	71, 841, 861, 1041, 1138, 1243, 1477
Sau96I	GGNCC	3 cut(s)	1390, 1504, 1567
SchI	GAGTC	5 cut(s)	488, 737, 772, 987, 1211
ScrFI	CCNGG	2 cut(s)	108, 230
SduI	GDGCHC	1 cut(s)	67
SfaNI	GCATC	3 cut(s)	614, 634, 1621
SfcI	CTRYAG	1 cut(s)	1619
Sfr274I	CTCGAG	2 cut(s)	60, 167
SfuI	TTCGAA	2 cut(s)	544, 629
SinI	GGWCC	3 cut(s)	1390, 1504, 1567
SlaI	CTCGAG	2 cut(s)	60, 167
SmiMI	CAYNNNNRTG	2 cut(s)	1146, 1173
SmlI	CTYRAG	4 cut(s)	54, 60, 167, 1481
SmoI	CTYRAG	4 cut(s)	54, 60, 167, 1481
Sse9I	AATT	5 cut(s)	23, 44, 496, 588, 1350
SseBI	AGGCCT	1 cut(s)	562
SsiI	CCGC	4 cut(s)	254, 859, 931, 1534
SspMI	CTAG	9 cut(s)	197, 420, 558, 609, 1092, 1188, 1232, 1251, 1334
SstI	GAGCTC	1 cut(s)	67
StuI	AGGCCT	1 cut(s)	562
StyD4I	CCNGG	2 cut(s)	106, 228
StyI	CCWWGG	1 cut(s)	653
TaiI	ACGT	1 cut(s)	1163
TaqI	TCGA	9 cut(s)	61, 168, 544, 629, 746, 817, 976, 1357, 1449
TasI	AATT	5 cut(s)	23, 44, 496, 588, 1350
TatI	WGTACW	1 cut(s)	202
TfiI	GAWTC	5 cut(s)	269, 898, 1067, 1184, 1261
Tru1I	TTAA	1 cut(s)	1314
Tru9I	TTAA	1 cut(s)	1314
TscAI	CASTG	4 cut(s)	739, 954, 1122, 1392
TseFI	GTSAC	5 cut(s)	6, 344, 949, 1156, 1596
TseI	GCWGC	5 cut(s)	856, 1277, 1327, 1330, 1337
Tsp45I	GTSAC	5 cut(s)	6, 344, 949, 1156, 1596
TspDTI	ATGAA	4 cut(s)	237, 252, 537, 824
TspRI	CASTG	4 cut(s)	739, 954, 1122, 1392
VpaK11BI	GGWCC	3 cut(s)	1390, 1504, 1567
XapI	RAATTY	3 cut(s)	23, 496, 1350
XbaI	TCTAGA	2 cut(s)	608, 1250
XceI	RCATGY	1 cut(s)	459
XhoI	CTCGAG	2 cut(s)	60, 167
XmiI	GTMKAC	1 cut(s)	1357
XspI	CTAG	9 cut(s)	197, 420, 558, 609, 1092, 1188, 1232, 1251, 1334
Zsp2I	ATGCAT	1 cut(s)	1614

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.