Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0002294

Physical Location & Seq

Genomic Coordinates Reverse (-)

19693718 .. 19699108

Gene Structure 5391 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00015800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1437 bp

ATGTGCAGTTTAGAGGACCCTATGGTCTGGGAAGGGGAACCTCCCGCACTAGTCAGTTCAGATAGTAGTACCAAGGTGCCTATTTGTGTAGACCATACCCCTCAGAAACCTATCCTTGCTAGCAGGGATGATGTAAAAATAGTTAGTAGAGATGATGACGAAAATTCCTCTGGGTGTACTCACCCTAGTACCACCACAAGGTATCTAAGGACCGCACAGCGGATTGGTGACCGAAGAATAAGGAAAGTATTGGCTTCGAGGTATTGGAAAGCAGCTCCAAAGATGAAGGATGGGGCACATTCTAATTCTTATAGGGATATGCGACCAATTTACCATGGCAGGAAGAATGGTTACAAACGCCAGAGATCTCAGATGAATATGCCTTTTAAGAAGAGGAGGCTTTTTGACCGTAGCACGGTTCTAAAATCCAATGGAGGTATTAGTAGTGAGAGCTTCTTTGACTCAGGTGAGAAGGGAATCACTGGAAATGCTCCTGCCTCATGTTCAAAGATGCAAGGAGCCAATGCGATATCTTCTTCAGTAGCAGGTCAGCATTCAGCTTTCCAATCTAGGAATTCTCATGTGAAGCTCAGGATCAAGTCTTTCCGGGTGCCAGAACTATTCATTGAAATTCCAGAGACTGCAACCGTTGGTTCATTGAAGAAGACTGTTATGGATGCAGTAACAGCTGTACTTGGTGGTGGATTGTGTGTTGGTGTACTTGTTCAGGGAAAGAAATTAAGAGATGACACTAAAACTCTACAACAGACAGGAATTTCTCAAGATGACCAGCTAGATTCTTTGGGATTTACTTTGGAACCTAACCCTCCCCACACTCCCACACCGCTATGTTCTGGAGATTCTCCCCGTATGCTTCCTTGCGACGTACTTCAGCCTTTAACAAGGTATGCACCTGATCCTAGTAGTGAAGCCTCACTCGAGCCTCATATGGCTGCTATAGGAAGCTTCATTGAAAGTGATCATGATTCAGCACCCTCTCCAACCGATACGTCTGCTGACAAAAGCACGACAGATTCTAAAGCTCTGGTTGTTGTGCCAGAAATGAGTGCAGAGGCACTAGCTGTAGTTCCTGGGAGCAGGAAATCAAAGCGGTTTGATATTGGGCAGCGCCGAATTCGTCGACCCTTCTCTGTTGCTGAAGTGGAAGCACTTGTTCAGGCGGTTGAGAAACTTGGTACTGGAAGATGGCGTGATGTGAAGATGCGAGCTTTTGAAAATGCCAAGCATCGAACTTATGTGGATTTGAAGGATAAGTGGAAGACACTTGTGCACACGGCAAGAATATCTCCTCAACAAAGGAGAGGTGAGCCTGTCCCCCAGGAACTCTTGGACCGGGTCCTTACCGCGCATGCTTACTGGTCCCAGCAGCAAGCAAAGCAACAGCTCAAACATCCCGAGAGCTGTGTTCTGGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0000228 GO:0000723 GO:0000781 GO:0000782 GO:0000783 GO:0000784 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003691 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005694 GO:0005737 GO:0005886 GO:0006139 GO:0006259 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008301 GO:0009628 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009737 GO:0009739 GO:0009751 GO:0009753 GO:0009755 GO:0009873 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0012505 GO:0014070 GO:0016020 GO:0016043 GO:0023052 GO:0031090 GO:0031627 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032200 GO:0032870 GO:0032991 GO:0032993 GO:0033993 GO:0034641 GO:0035556 GO:0042162 GO:0042221 GO:0042493 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0046677 GO:0046686 GO:0050789 GO:0050794 GO:0050896 GO:0051276 GO:0051716 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0070887 GO:0071310 GO:0071369 GO:0071495 GO:0071704 GO:0071840 GO:0071944 GO:0090304 GO:0097159 GO:0097305 GO:0098687 GO:1901360 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

478

Amino Acids

52.84

Weight (kDa)

9.45

Isoelectric Point (pI)

53.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ubiquitin_TPR1	PF23603	194 - 262	1.3e-38	Telomere repeat-binding protein 1-like, ubiquitin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002294)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07540 AT3G46590 AT3G46590 AT3G46590 AT3G46590 AT3G46590 AT5G59430 AT5G59430 AT5G59430 AT5G59430 AT5G59430
fragaria_vesca	FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520
malus_domestica	MD03G1089900.v1.1 MD11G1099200.v1.1
prunus_persica	Prupe.6G074100_v2.0.a1 Prupe.6G074100_v2.0.a1
pyrus_communis	pycom03g07150 pycom11g08340
rosa_chinensis	RchiOBHm_Chr5g0065391 RchiOBHm_Chr5g0065401 RchiOBHm_Chr5g0065451
rosa_laevigata	RLG00000035788
rosa_multiflora	Rmu_sc0001010.1_g000092
rosa_roxburghii	Rroxscaffold_1G00015800
rosa_rugosa	Rorug05G0371900 Rorug05G0372000 Rorug05G0372100 Rorug05G0372100
rosa_samantha	Rh5AG429700 Rh5BG444900 Rh5CG467200 Rh5DG457400
rosa_wichuraiana	Rw5G040330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	23
Acc36I	ACCTGC	1 cut(s)	536
AccB1I	GGYRCC	2 cut(s)	76, 610
AccI	GTMKAC	2 cut(s)	90, 1141
AccII	CGCG	1 cut(s)	1367
AciI	CCGC	7 cut(s)	45, 213, 220, 845, 1111, 1181, 1365
AclWI	GGATC	2 cut(s)	602, 911
AcsI	RAATTY	5 cut(s)	163, 574, 630, 774, 1134
AcuI	CTGAAG	3 cut(s)	522, 875, 1179
AfaI	GTAC	7 cut(s)	70, 178, 190, 693, 720, 888, 1198
AfiI	CCNNNNNNNGG	3 cut(s)	198, 219, 415
AgsI	TTSAA	6 cut(s)	507, 629, 661, 974, 1235, 1267
AhlI	ACTAGT	1 cut(s)	49
AjnI	CCWGG	2 cut(s)	1090, 1338
Alw21I	GWGCWC	1 cut(s)	1293
Alw26I	GTCTC	1 cut(s)	632
Alw44I	GTGCAC	1 cut(s)	1289
AlwI	GGATC	2 cut(s)	602, 911
AlwNI	CAGNNNCTG	1 cut(s)	641
Ama87I	CYCGRG	2 cut(s)	938, 1415
ApaLI	GTGCAC	1 cut(s)	1289
ApeKI	GCWGC	4 cut(s)	272, 953, 1126, 1387
ApoI	RAATTY	5 cut(s)	163, 574, 630, 774, 1134
AspLEI	GCGC	2 cut(s)	1131, 1369
AspS9I	GGNCC	5 cut(s)	16, 210, 1351, 1357, 1380
AsuC2I	CCSGG	2 cut(s)	608, 1355
AsuHPI	GGTGA	4 cut(s)	173, 239, 479, 1337
AsuNHI	GCTAGC	1 cut(s)	119
AvaI	CYCGRG	2 cut(s)	938, 1415
AvaII	GGWCC	5 cut(s)	16, 210, 1351, 1357, 1380
BaeGI	GKGCMC	2 cut(s)	298, 1293
BaeI	ACNNNNGTAYC	2 cut(s)	172, 205
BanI	GGYRCC	2 cut(s)	76, 610
BarI	GAAGNNNNNNTAC	2 cut(s)	335, 367
BbsI	GAAGAC	2 cut(s)	671, 1286
Bbv12I	GWGCWC	1 cut(s)	1293
BbvI	GCAGC	4 cut(s)	284, 940, 1138, 1399
BccI	CCATC	2 cut(s)	284, 1200
BceAI	ACGGC	1 cut(s)	1311
BcgI	CGANNNNNNTGC	2 cut(s)	995, 1029
BciT130I	CCWGG	2 cut(s)	1092, 1340
BclI	TGATCA	1 cut(s)	979
BcnI	CCSGG	2 cut(s)	608, 1355
BcoDI	GTCTC	1 cut(s)	632
BcuI	ACTAGT	1 cut(s)	49
BfaI	CTAG	7 cut(s)	50, 120, 186, 570, 794, 921, 1079
BfmI	CTRYAG	2 cut(s)	957, 1083
BfoI	RGCGCY	1 cut(s)	1132
BfuAI	ACCTGC	1 cut(s)	536
BglII	AGATCT	1 cut(s)	365
BisI	GCNGC	4 cut(s)	273, 954, 1127, 1388
BlsI	GCNGC	4 cut(s)	274, 955, 1128, 1389
Bme1390I	CCNGG	4 cut(s)	608, 1092, 1340, 1355
Bme18I	GGWCC	5 cut(s)	16, 210, 1351, 1357, 1380
BmeT110I	CYCGRG	2 cut(s)	938, 1415
BmgT120I	GGNCC	5 cut(s)	16, 210, 1351, 1357, 1380
BmiI	GGNNCC	8 cut(s)	18, 39, 78, 520, 612, 819, 1358, 1382
BmrFI	CCNGG	4 cut(s)	608, 1092, 1340, 1355
BmsI	GCATC	4 cut(s)	501, 667, 1212, 1255
BmtI	GCTAGC	1 cut(s)	123
BpiI	GAAGAC	2 cut(s)	671, 1286
BpmI	CTGGAG	1 cut(s)	876
Bpu10I	CCTNAGC	1 cut(s)	590
BpuEI	CTTGAG	1 cut(s)	765
BpuMI	CCSGG	2 cut(s)	608, 1355
BsaJI	CCNNGG	4 cut(s)	72, 334, 1091, 1338
Bsc4I	CCNNNNNNNGG	3 cut(s)	198, 219, 415
Bse1I	ACTGG	3 cut(s)	487, 1204, 1382
BseBI	CCWGG	2 cut(s)	1092, 1340
BseDI	CCNNGG	4 cut(s)	72, 334, 1091, 1338
BseGI	GGATG	4 cut(s)	133, 295, 682, 1411
BseLI	CCNNNNNNNGG	3 cut(s)	198, 219, 415
BseMII	CTCAG	4 cut(s)	116, 383, 477, 604
BseNI	ACTGG	3 cut(s)	487, 1204, 1382
BseRI	GAGGAG	2 cut(s)	409, 1299
BseSI	GKGCMC	2 cut(s)	298, 1293
BseXI	GCAGC	4 cut(s)	284, 940, 1138, 1399
BseYI	CCCAGC	1 cut(s)	1383
BsgI	GTGCAG	2 cut(s)	25, 1089
Bsh1236I	CGCG	1 cut(s)	1367
BshNI	GGYRCC	2 cut(s)	76, 610
BsiHKAI	GWGCWC	1 cut(s)	1293
BsiHKCI	CYCGRG	2 cut(s)	938, 1415
BsiSI	CCGG	2 cut(s)	607, 1354
BslFI	GGGAC	2 cut(s)	1319, 1366
BslI	CCNNNNNNNGG	3 cut(s)	198, 219, 415
BsmAI	GTCTC	1 cut(s)	632
BsmFI	GGGAC	2 cut(s)	1319, 1366
BsmI	GAATGC	1 cut(s)	553
BsoBI	CYCGRG	2 cut(s)	938, 1415
Bsp1286I	GDGCHC	2 cut(s)	298, 1293
Bsp143I	GATC	4 cut(s)	365, 594, 916, 979
Bsp19I	CCATGG	1 cut(s)	334
BspACI	CCGC	7 cut(s)	45, 213, 220, 845, 1111, 1181, 1365
BspCNI	CTCAG	4 cut(s)	115, 382, 476, 603
BspFNI	CGCG	1 cut(s)	1367
BspHI	TCATGA	1 cut(s)	982
BspLI	GGNNCC	8 cut(s)	18, 39, 78, 520, 612, 819, 1358, 1382
BspMI	ACCTGC	1 cut(s)	536
BspOI	GCTAGC	1 cut(s)	123
BspPI	GGATC	2 cut(s)	602, 911
BspT107I	GGYRCC	2 cut(s)	76, 610
BsrI	ACTGG	3 cut(s)	487, 1204, 1382
BssECI	CCNNGG	4 cut(s)	72, 334, 1091, 1338
BssMI	GATC	4 cut(s)	365, 594, 916, 979
BssT1I	CCWWGG	2 cut(s)	72, 334
Bst2UI	CCWGG	2 cut(s)	1092, 1340
Bst4CI	ACNGT	4 cut(s)	410, 418, 649, 670
Bst6I	CTCTTC	1 cut(s)	386
BstC8I	GCNNGC	4 cut(s)	121, 1227, 1371, 1392
BstDEI	CTNAG	5 cut(s)	102, 206, 369, 463, 590
BstDSI	CCRYGG	1 cut(s)	334
BstEII	GGTNACC	1 cut(s)	227
BstF5I	GGATG	4 cut(s)	133, 295, 682, 1411
BstFNI	CGCG	1 cut(s)	1367
BstH2I	RGCGCY	1 cut(s)	1132
BstHHI	GCGC	2 cut(s)	1131, 1369
BstKTI	GATC	4 cut(s)	368, 597, 919, 982
BstMAI	GTCTC	1 cut(s)	632
BstMBI	GATC	4 cut(s)	365, 594, 916, 979
BstMWI	GCNNNNNNNGC	2 cut(s)	686, 1396
BstNI	CCWGG	2 cut(s)	1092, 1340
BstNSI	RCATGY	1 cut(s)	1373
BstPI	GGTNACC	1 cut(s)	227
BstSCI	CCNGG	4 cut(s)	606, 1090, 1338, 1353
BstSFI	CTRYAG	2 cut(s)	957, 1083
BstSLI	GKGCMC	2 cut(s)	298, 1293
BstUI	CGCG	1 cut(s)	1367
BstV1I	GCAGC	4 cut(s)	284, 940, 1138, 1399
BstV2I	GAAGAC	2 cut(s)	671, 1286
BstX2I	RGATCY	1 cut(s)	365
BstYI	RGATCY	1 cut(s)	365
BtgI	CCRYGG	1 cut(s)	334
BtsCI	GGATG	4 cut(s)	133, 295, 682, 1411
BtsIMutI	CAGTG	1 cut(s)	480
BveI	ACCTGC	1 cut(s)	536
Cac8I	GCNNGC	4 cut(s)	121, 1227, 1371, 1392
CaiI	CAGNNNCTG	1 cut(s)	641
CciI	TCATGA	1 cut(s)	982
CfoI	GCGC	2 cut(s)	1131, 1369
Cfr13I	GGNCC	5 cut(s)	16, 210, 1351, 1357, 1380
Csp6I	GTAC	7 cut(s)	69, 177, 189, 692, 719, 887, 1197
CviAII	CATG	5 cut(s)	335, 501, 581, 983, 1370
CviQI	GTAC	7 cut(s)	69, 177, 189, 692, 719, 887, 1197
DdeI	CTNAG	5 cut(s)	102, 206, 369, 463, 590
DpnI	GATC	4 cut(s)	367, 596, 918, 981
DpnII	GATC	4 cut(s)	365, 594, 916, 979
DrdI	GACNNNNNNGTC	1 cut(s)	23
DseDI	GACNNNNNNGTC	1 cut(s)	23
Eam1104I	CTCTTC	1 cut(s)	386
EarI	CTCTTC	1 cut(s)	386
Eco130I	CCWWGG	2 cut(s)	72, 334
Eco32I	GATATC	1 cut(s)	531
Eco47I	GGWCC	5 cut(s)	16, 210, 1351, 1357, 1380
Eco57I	CTGAAG	3 cut(s)	522, 875, 1179
Eco88I	CYCGRG	2 cut(s)	938, 1415
Eco91I	GGTNACC	1 cut(s)	227
EcoO109I	RGGNCCY	2 cut(s)	16, 1357
EcoO65I	GGTNACC	1 cut(s)	227
EcoRI	GAATTC	2 cut(s)	574, 1134
EcoRII	CCWGG	2 cut(s)	1090, 1338
EcoRV	GATATC	1 cut(s)	531
EcoT14I	CCWWGG	2 cut(s)	72, 334
ErhI	CCWWGG	2 cut(s)	72, 334
FaeI	CATG	5 cut(s)	338, 504, 584, 986, 1373
FaqI	GGGAC	2 cut(s)	1319, 1366
FatI	CATG	5 cut(s)	334, 500, 580, 982, 1369
FauI	CCCGC	1 cut(s)	52
FauNDI	CATATG	1 cut(s)	948
FbaI	TGATCA	1 cut(s)	979
FblI	GTMKAC	2 cut(s)	90, 1141
Fnu4HI	GCNGC	4 cut(s)	273, 954, 1127, 1388
FokI	GGATG	4 cut(s)	140, 302, 689, 1398
Fsp4HI	GCNGC	4 cut(s)	273, 954, 1127, 1388
FspBI	CTAG	7 cut(s)	50, 120, 186, 570, 794, 921, 1079
GlaI	GCGC	2 cut(s)	1130, 1368
GluI	GCNGC	4 cut(s)	273, 954, 1127, 1388
GsaI	CCCAGC	1 cut(s)	1387
GsuI	CTGGAG	1 cut(s)	876
HaeII	RGCGCY	1 cut(s)	1132
HapII	CCGG	2 cut(s)	607, 1354
HhaI	GCGC	2 cut(s)	1131, 1369
Hin1II	CATG	5 cut(s)	338, 504, 584, 986, 1373
Hin6I	GCGC	2 cut(s)	1129, 1367
HinP1I	GCGC	2 cut(s)	1129, 1367
HincII	GTYRAC	1 cut(s)	1142
HindII	GTYRAC	1 cut(s)	1142
HindIII	AAGCTT	1 cut(s)	964
HinfI	GANTC	6 cut(s)	461, 477, 797, 860, 986, 1034
HpaII	CCGG	2 cut(s)	607, 1354
HphI	GGTGA	4 cut(s)	173, 239, 479, 1337
Hpy166II	GTNNAC	5 cut(s)	91, 177, 719, 1142, 1291
Hpy188I	TCNGA	4 cut(s)	61, 105, 372, 1436
Hpy188III	TCNNGA	6 cut(s)	592, 635, 782, 855, 983, 1415
Hpy8I	GTNNAC	5 cut(s)	91, 177, 719, 1142, 1291
Hpy99I	CGWCG	2 cut(s)	887, 1143
HpyAV	CCTTC	5 cut(s)	26, 280, 466, 1156, 1261
HpyCH4III	ACNGT	4 cut(s)	410, 418, 649, 670
HpyCH4IV	ACGT	2 cut(s)	885, 1010
HpyCH4V	TGCA	7 cut(s)	6, 514, 644, 680, 911, 1070, 1291
HpyF10VI	GCNNNNNNNGC	2 cut(s)	686, 1396
HpyF3I	CTNAG	5 cut(s)	102, 206, 369, 463, 590
HpySE526I	ACGT	2 cut(s)	885, 1010
Hsp92II	CATG	5 cut(s)	338, 504, 584, 986, 1373
HspAI	GCGC	2 cut(s)	1129, 1367
Ksp22I	TGATCA	1 cut(s)	979
Kzo9I	GATC	4 cut(s)	365, 594, 916, 979
LmnI	GCTCC	4 cut(s)	280, 496, 518, 1095
Lsp1109I	GCAGC	4 cut(s)	284, 940, 1138, 1399
LweI	GCATC	4 cut(s)	501, 667, 1212, 1255
MaeI	CTAG	7 cut(s)	50, 120, 186, 570, 794, 921, 1079
MaeII	ACGT	2 cut(s)	885, 1010
MaeIII	GTNAC	3 cut(s)	227, 350, 682
MalI	GATC	4 cut(s)	367, 596, 918, 981
MboI	GATC	4 cut(s)	365, 594, 916, 979
MflI	RGATCY	1 cut(s)	365
MhlI	GDGCHC	2 cut(s)	298, 1293
MluCI	AATT	8 cut(s)	163, 304, 327, 574, 630, 737, 774, 1134
MlyI	GAGTC	1 cut(s)	455
MmeI	TCCRAC	1 cut(s)	1025
MseI	TTAA	3 cut(s)	387, 740, 899
MslI	CAYNNNNRTG	1 cut(s)	847
MspA1I	CMGCKG	2 cut(s)	220, 689
MspI	CCGG	2 cut(s)	607, 1354
MspR9I	CCNGG	4 cut(s)	608, 1092, 1340, 1355
Mva1269I	GAATGC	1 cut(s)	553
MvaI	CCWGG	2 cut(s)	1092, 1340
MvnI	CGCG	1 cut(s)	1367
MwoI	GCNNNNNNNGC	2 cut(s)	686, 1396
NciI	CCSGG	2 cut(s)	608, 1355
NcoI	CCATGG	1 cut(s)	334
NdeI	CATATG	1 cut(s)	948
NdeII	GATC	4 cut(s)	365, 594, 916, 979
NheI	GCTAGC	1 cut(s)	119
NlaIII	CATG	5 cut(s)	338, 504, 584, 986, 1373
NlaIV	GGNNCC	8 cut(s)	18, 39, 78, 520, 612, 819, 1358, 1382
NmuCI	GTSAC	1 cut(s)	227
NspI	RCATGY	1 cut(s)	1373
PaeI	GCATGC	1 cut(s)	1373
PaeR7I	CTCGAG	1 cut(s)	938
PagI	TCATGA	1 cut(s)	982
PctI	GAATGC	1 cut(s)	553
PfeI	GAWTC	5 cut(s)	477, 797, 860, 986, 1034
PflFI	GACNNNGTC	1 cut(s)	1355
PkrI	GCNGC	4 cut(s)	274, 955, 1128, 1389
PleI	GAGTC	1 cut(s)	455
PpsI	GAGTC	1 cut(s)	455
PpuMI	RGGWCCY	2 cut(s)	16, 1357
Psp5II	RGGWCCY	2 cut(s)	16, 1357
Psp6I	CCWGG	2 cut(s)	1090, 1338
PspEI	GGTNACC	1 cut(s)	227
PspFI	CCCAGC	1 cut(s)	1383
PspGI	CCWGG	2 cut(s)	1090, 1338
PspN4I	GGNNCC	8 cut(s)	18, 39, 78, 520, 612, 819, 1358, 1382
PspPI	GGNCC	5 cut(s)	16, 210, 1351, 1357, 1380
PspPPI	RGGWCCY	2 cut(s)	16, 1357
PspXI	VCTCGAGB	1 cut(s)	938
PstNI	CAGNNNCTG	1 cut(s)	641
PsuI	RGATCY	1 cut(s)	365
PsyI	GACNNNGTC	1 cut(s)	1355
PvuII	CAGCTG	1 cut(s)	689
RsaI	GTAC	7 cut(s)	70, 178, 190, 693, 720, 888, 1198
RsaNI	GTAC	7 cut(s)	69, 177, 189, 692, 719, 887, 1197
RseI	CAYNNNNRTG	1 cut(s)	847
SalI	GTCGAC	1 cut(s)	1140
SaqAI	TTAA	3 cut(s)	387, 740, 899
SatI	GCNGC	4 cut(s)	273, 954, 1127, 1388
Sau3AI	GATC	4 cut(s)	365, 594, 916, 979
Sau96I	GGNCC	5 cut(s)	16, 210, 1351, 1357, 1380
SchI	GAGTC	1 cut(s)	455
ScrFI	CCNGG	4 cut(s)	608, 1092, 1340, 1355
SduI	GDGCHC	2 cut(s)	298, 1293
SfaNI	GCATC	4 cut(s)	501, 667, 1212, 1255
SfcI	CTRYAG	2 cut(s)	957, 1083
Sfr274I	CTCGAG	1 cut(s)	938
SinI	GGWCC	5 cut(s)	16, 210, 1351, 1357, 1380
SlaI	CTCGAG	1 cut(s)	938
SmiMI	CAYNNNNRTG	1 cut(s)	847
SmlI	CTYRAG	2 cut(s)	780, 938
SmoI	CTYRAG	2 cut(s)	780, 938
SpeI	ACTAGT	1 cut(s)	49
SphI	GCATGC	1 cut(s)	1373
Sse9I	AATT	8 cut(s)	163, 304, 327, 574, 630, 737, 774, 1134
SsiI	CCGC	7 cut(s)	45, 213, 220, 845, 1111, 1181, 1365
SspMI	CTAG	7 cut(s)	50, 120, 186, 570, 794, 921, 1079
StyD4I	CCNGG	4 cut(s)	606, 1090, 1338, 1353
StyI	CCWWGG	2 cut(s)	72, 334
TaaI	ACNGT	4 cut(s)	410, 418, 649, 670
TaiI	ACGT	2 cut(s)	888, 1013
TaqI	TCGA	4 cut(s)	257, 939, 1141, 1249
TaqII	GACCGA	1 cut(s)	246
TasI	AATT	8 cut(s)	163, 304, 327, 574, 630, 737, 774, 1134
TatI	WGTACW	3 cut(s)	176, 691, 718
TfiI	GAWTC	5 cut(s)	477, 797, 860, 986, 1034
Tru1I	TTAA	3 cut(s)	387, 740, 899
Tru9I	TTAA	3 cut(s)	387, 740, 899
TscAI	CASTG	1 cut(s)	487
TseFI	GTSAC	1 cut(s)	227
TseI	GCWGC	4 cut(s)	272, 953, 1126, 1387
Tsp45I	GTSAC	1 cut(s)	227
TspDTI	ATGAA	5 cut(s)	299, 389, 613, 645, 958
TspRI	CASTG	1 cut(s)	487
Tth111I	GACNNNGTC	1 cut(s)	1355
VneI	GTGCAC	1 cut(s)	1289
VpaK11BI	GGWCC	5 cut(s)	16, 210, 1351, 1357, 1380
XapI	RAATTY	5 cut(s)	163, 574, 630, 774, 1134
XceI	RCATGY	1 cut(s)	1373
XhoI	CTCGAG	1 cut(s)	938
XmiI	GTMKAC	2 cut(s)	90, 1141
XspI	CTAG	7 cut(s)	50, 120, 186, 570, 794, 921, 1079

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.