Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002294

Physical Location & Seq

Genomic Coordinates Forward (+)

23967217 .. 23970996

Gene Structure 3780 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G59430.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1737 bp

ATGGTGTCGCATAAGTGTGTAGAAGAATTTGGATACGCAAGCTACCTGGTACCTTCCAATGCAAGAGCACCCAGATCCGCCCGGAAGAGGCGCAGTATCGAGAAGAGGATAAGTAAAGAAGATGATAATATGTGTGCAATTGATCTATTGGCCACCGTAGCTGGACACTTGTCATTTGAGAGTGGGAGTTCTCTCATGTCTATTGACAAACTGATTGAAGATCATCGTGTAAAGGAGGAATTCCCGGAGGAAGAAAAACCTCTAATGCCAGTAGCTTTATCCCCTTATCGGGGATCTTTGAGTCCCTGCGGATTCAGTTCTGTGATAAATGGCAAAGTAGAGAATGAGGTAGATGGTTTTAGTTACTCTGGTGGTAGTGATGCTTGTCAAGTCGGGAACTTCAGTCAAGATGTAAAACCGGATATCGATGGTGATGCAGTAGTTCTGGATGCGAGACCTAATGTTGTAGTTAGTTTAGGTAGTAGTAGTAGAACCGAAGTGCCATCAATTGGGAACTGTGTTTCCCATGGCGTTCGGGATGATGTAAATTTGTTTAGTAGAGATGATGATGAAAACTTTTCCAAGTACATTCACCCGCGTGTTACAAAACATTCACCTAGGACTGTACCTCGTATTGGGGACAGAAGAATCAGGAAGATATTGGCTTCTAGACATTGGAAAGGAGGTTCAAGGCATTCAGATACGAAACCGTGGAGAAATTATTACTTGCACCAGCAGAGGAGCTATCCTATCAAGAAAAGGAAAAACTTTGACCACATATCTGATTCCGTTACTGATGATTACCGTATGCGTACTAAGATGCATAGAGGTAGTAGAAAAGGTCAAGGGGCATCCTTTGTGGCAAGCGACTCCCATGTGAAACTACGGATCAAGTCGTTCAGGGTGCCTGAGCTTTTCATAGAGATTCCAGAAACTGCTACTGTTGGCTCATTGAAGAGAATGGTGATGGAAGCAGTGAGCACTTTACTGAGTGATGGACACCGAGTTGGTCTGATGGTTCAGGGGAAGAAAGTCCGTGACGATAACAAAACCCTTCATCAGACTGGTATCTCTCAGGATAACTCCCACCTGGACTCTCTTGATTTTAGCCTTGAACCCAGCTCAGAAATGCCTCAACTGTTAACTAGTCACCCGTTGGGACATGCTTGTGAGGAGCTGCTACCTGTGTGCCAAGCTACTAAAATAGACAATGTGTTGGAATCTGACCATCATGACTCAGCATTATTCCCATCTGACTCATTAGGCAACAATAATGTGACAGAAGATTCTAAAGCTATGATTTCTGTGGCGCTCAACGAATTGTCTTCTCAATCACAACCACCTTCCCGGAAATCTAGAAGAAGTGAACAGCAGCAGCAGCAGGCTGCACAACGCAGAATTCGTCGACCTTTCTCAGTTGCTGAAGTAGAAGCACTTGTTCAAGCAGTTGAGAAACTCGGTACTGGAAGGTGGAGAGATGTTAAGCTTTGTGCTTTCGAGGATGCTGACCACCGCACTTACGTAGATCTCAAGGATAAATGGAAAACGCTGGTCCACACGGCTAAGATATCTCCACAACAGAGGAGAGGAGAGCCAGTGCCGCAGGAACTTCTAAACCGAGTCTTGAACGCCCATGGCTACTGGACGCAGCAACAGATGCAGCAGCTGCAGCAGAATGTGAACAAGCTGGAGCAGGAGACACAGTCTCAAACGACAGAGGGTCTGTTACTTCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0000228 GO:0000723 GO:0000781 GO:0000782 GO:0000783 GO:0000784 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003691 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005694 GO:0005737 GO:0005886 GO:0006139 GO:0006259 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008301 GO:0009628 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009737 GO:0009739 GO:0009751 GO:0009753 GO:0009755 GO:0009873 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0012505 GO:0014070 GO:0016020 GO:0016043 GO:0023052 GO:0031090 GO:0031627 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032200 GO:0032870 GO:0032991 GO:0032993 GO:0033993 GO:0034641 GO:0035556 GO:0042162 GO:0042221 GO:0042493 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0046677 GO:0046686 GO:0050789 GO:0050794 GO:0050896 GO:0051276 GO:0051716 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0070887 GO:0071310 GO:0071369 GO:0071495 GO:0071704 GO:0071840 GO:0071944 GO:0090304 GO:0097159 GO:0097305 GO:0098687 GO:1901360 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

578

Amino Acids

65.04

Weight (kDa)

8.46

Isoelectric Point (pI)

57.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ubiquitin_TPR1	PF23603	292 - 360	1.3e-36	Telomere repeat-binding protein 1-like, ubiquitin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002294)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07540 AT3G46590 AT3G46590 AT3G46590 AT3G46590 AT3G46590 AT5G59430 AT5G59430 AT5G59430 AT5G59430 AT5G59430
fragaria_vesca	FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520
malus_domestica	MD03G1089900.v1.1 MD11G1099200.v1.1
prunus_persica	Prupe.6G074100_v2.0.a1 Prupe.6G074100_v2.0.a1
pyrus_communis	pycom03g07150 pycom11g08340
rosa_chinensis	RchiOBHm_Chr5g0065391 RchiOBHm_Chr5g0065401 RchiOBHm_Chr5g0065451
rosa_laevigata	RLG00000035788
rosa_multiflora	Rmu_sc0001010.1_g000092
rosa_roxburghii	Rroxscaffold_1G00015800
rosa_rugosa	Rorug05G0371900 Rorug05G0372000 Rorug05G0372100 Rorug05G0372100
rosa_samantha	Rh5AG429700 Rh5BG444900 Rh5CG467200 Rh5DG457400
rosa_wichuraiana	Rw5G040330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	49
AccB1I	GGYRCC	2 cut(s)	49, 904
AccB7I	CCANNNNNTGG	1 cut(s)	509
AccI	GTMKAC	1 cut(s)	1405
AccII	CGCG	1 cut(s)	598
AciI	CCGC	5 cut(s)	78, 309, 596, 1513, 1601
AclWI	GGATC	3 cut(s)	69, 301, 896
AcoI	YGGCCR	1 cut(s)	150
AcsI	RAATTY	4 cut(s)	26, 239, 547, 1398
AcuI	CTGAAG	2 cut(s)	385, 1443
AfaI	GTAC	5 cut(s)	51, 587, 627, 814, 1462
AfiI	CCNNNNNNNGG	6 cut(s)	87, 288, 289, 290, 509, 635
AgsI	TTSAA	6 cut(s)	218, 690, 955, 1115, 1442, 1627
AhdI	GACNNNNNGTC	1 cut(s)	1719
AhlI	ACTAGT	1 cut(s)	1145
AjnI	CCWGG	2 cut(s)	45, 1089
AleI	CACNNNNGTG	1 cut(s)	597
AloI	GAACNNNNNNTCC	4 cut(s)	506, 538, 670, 702
Alw21I	GWGCWC	2 cut(s)	70, 983
Alw26I	GTCTC	3 cut(s)	448, 1691, 1710
AlwI	GGATC	3 cut(s)	69, 301, 896
AlwNI	CAGNNNCTG	3 cut(s)	935, 1421, 1666
AoxI	GGCC	1 cut(s)	150
ApoI	RAATTY	4 cut(s)	26, 239, 547, 1398
Asp718I	GGTACC	1 cut(s)	49
AspA2I	CCTAGG	1 cut(s)	617
AspLEI	GCGC	2 cut(s)	93, 1312
AspS9I	GGNCC	1 cut(s)	1552
AsuC2I	CCSGG	3 cut(s)	82, 245, 1348
AsuHPI	GGTGA	5 cut(s)	443, 584, 606, 976, 1142
AvaII	GGWCC	1 cut(s)	1552
AvrII	CCTAGG	1 cut(s)	617
BalI	TGGCCA	1 cut(s)	152
BanI	GGYRCC	2 cut(s)	49, 904
BbsI	GAAGAC	1 cut(s)	1317
Bbv12I	GWGCWC	2 cut(s)	70, 983
BccI	CCATC	8 cut(s)	347, 422, 511, 961, 989, 1009, 1236, 1258
BceAI	ACGGC	1 cut(s)	1575
BcgI	CGANNNNNNTGC	2 cut(s)	416, 450
BciT130I	CCWGG	2 cut(s)	47, 1091
BciVI	GTATCC	1 cut(s)	26
BcnI	CCSGG	3 cut(s)	82, 245, 1348
BcoDI	GTCTC	3 cut(s)	448, 1691, 1710
BcuI	ACTAGT	1 cut(s)	1145
BfaI	CTAG	4 cut(s)	618, 669, 1146, 1356
BfmI	CTRYAG	1 cut(s)	1667
BfoI	RGCGCY	1 cut(s)	1313
BfuI	GTATCC	1 cut(s)	26
BglII	AGATCT	1 cut(s)	1525
BlnI	CCTAGG	1 cut(s)	617
Bme1390I	CCNGG	5 cut(s)	47, 82, 245, 1091, 1348
Bme18I	GGWCC	1 cut(s)	1552
BmeRI	GACNNNNNGTC	1 cut(s)	1719
BmgT120I	GGNCC	1 cut(s)	1552
BmiI	GGNNCC	2 cut(s)	51, 906
BmrFI	CCNGG	5 cut(s)	47, 82, 245, 1091, 1348
BmsI	GCATC	7 cut(s)	370, 424, 439, 810, 860, 1492, 1647
BoxI	GACNNNNGTC	1 cut(s)	169
BpiI	GAAGAC	1 cut(s)	1317
BpmI	CTGGAG	1 cut(s)	1709
Bpu10I	CCTNAGC	1 cut(s)	909
BpuEI	CTTGAG	1 cut(s)	1514
BpuMI	CCSGG	3 cut(s)	82, 245, 1348
Bsa29I	ATCGAT	1 cut(s)	426
BsaAI	YACGTR	1 cut(s)	1522
BsaI	GGTCTC	1 cut(s)	448
BsaJI	CCNNGG	4 cut(s)	526, 617, 710, 1633
BsaWI	WCCGGW	1 cut(s)	418
BsaXI	ACNNNNNCTCC	4 cut(s)	1581, 1611, 1688, 1718
Bsc4I	CCNNNNNNNGG	6 cut(s)	87, 288, 289, 290, 509, 635
Bse1I	ACTGG	5 cut(s)	269, 1069, 1468, 1595, 1646
BseBI	CCWGG	2 cut(s)	47, 1091
BseCI	ATCGAT	1 cut(s)	426
BseDI	CCNNGG	4 cut(s)	526, 617, 710, 1633
BseGI	GGATG	4 cut(s)	454, 544, 851, 1507
BseLI	CCNNNNNNNGG	6 cut(s)	87, 288, 289, 290, 509, 635
BseMII	CTCAG	6 cut(s)	900, 980, 1088, 1137, 1251, 1428
BseNI	ACTGG	5 cut(s)	269, 1069, 1468, 1595, 1646
BseRI	GAGGAG	4 cut(s)	754, 1187, 1597, 1602
BseYI	CCCAGC	1 cut(s)	1118
BsgI	GTGCAG	1 cut(s)	1371
Bsh1236I	CGCG	1 cut(s)	598
BshFI	GGCC	1 cut(s)	152
BshNI	GGYRCC	2 cut(s)	49, 904
BshVI	ATCGAT	1 cut(s)	426
BsiHKAI	GWGCWC	2 cut(s)	70, 983
BsiSI	CCGG	4 cut(s)	82, 245, 419, 1348
BslFI	GGGAC	3 cut(s)	288, 653, 1173
BslI	CCNNNNNNNGG	6 cut(s)	87, 288, 289, 290, 509, 635
BsmAI	GTCTC	3 cut(s)	448, 1691, 1710
BsmFI	GGGAC	3 cut(s)	288, 653, 1173
BsmI	GAATGC	1 cut(s)	694
BsnI	GGCC	1 cut(s)	152
Bso31I	GGTCTC	1 cut(s)	448
Bsp1286I	GDGCHC	2 cut(s)	70, 983
Bsp143I	GATC	6 cut(s)	74, 142, 220, 293, 888, 1525
Bsp19I	CCATGG	2 cut(s)	526, 1633
BspACI	CCGC	5 cut(s)	78, 309, 596, 1513, 1601
BspANI	GGCC	1 cut(s)	152
BspCNI	CTCAG	6 cut(s)	901, 981, 1087, 1136, 1250, 1427
BspDI	ATCGAT	1 cut(s)	426
BspFNI	CGCG	1 cut(s)	598
BspHI	TCATGA	1 cut(s)	1231
BspLI	GGNNCC	2 cut(s)	51, 906
BspMAI	CTGCAG	1 cut(s)	1671
BspPI	GGATC	3 cut(s)	69, 301, 896
BspT107I	GGYRCC	2 cut(s)	49, 904
BspTNI	GGTCTC	1 cut(s)	448
BsrI	ACTGG	5 cut(s)	269, 1069, 1468, 1595, 1646
BssECI	CCNNGG	4 cut(s)	526, 617, 710, 1633
BssMI	GATC	6 cut(s)	74, 142, 220, 293, 888, 1525
BssT1I	CCWWGG	3 cut(s)	526, 617, 1633
Bst2UI	CCWGG	2 cut(s)	47, 1091
Bst4CI	ACNGT	8 cut(s)	157, 518, 625, 711, 806, 943, 1140, 1704
Bst6I	CTCTTC	3 cut(s)	80, 98, 950
BstAPI	GCANNNNNTGC	2 cut(s)	1657, 1666
BstBAI	YACGTR	1 cut(s)	1522
BstC8I	GCNNGC	3 cut(s)	40, 865, 1383
BstDEI	CTNAG	8 cut(s)	816, 909, 989, 1074, 1123, 1237, 1414, 1563
BstDSI	CCRYGG	3 cut(s)	526, 710, 1633
BstF5I	GGATG	4 cut(s)	454, 544, 851, 1507
BstFNI	CGCG	1 cut(s)	598
BstH2I	RGCGCY	1 cut(s)	1313
BstHHI	GCGC	2 cut(s)	93, 1312
BstKTI	GATC	6 cut(s)	77, 145, 223, 296, 891, 1528
BstMAI	GTCTC	3 cut(s)	448, 1691, 1710
BstMBI	GATC	6 cut(s)	74, 142, 220, 293, 888, 1525
BstMWI	GCNNNNNNNGC	6 cut(s)	158, 1378, 1600, 1657, 1666, 1669
BstNI	CCWGG	2 cut(s)	47, 1091
BstNSI	RCATGY	1 cut(s)	1166
BstPAI	GACNNNNGTC	1 cut(s)	169
BstSCI	CCNGG	5 cut(s)	45, 80, 243, 1089, 1346
BstSFI	CTRYAG	1 cut(s)	1667
BstSNI	TACGTA	1 cut(s)	1522
BstUI	CGCG	1 cut(s)	598
BstV2I	GAAGAC	1 cut(s)	1317
BstX2I	RGATCY	3 cut(s)	74, 293, 1525
BstYI	RGATCY	3 cut(s)	74, 293, 1525
Bsu15I	ATCGAT	1 cut(s)	426
BsuI	GTATCC	1 cut(s)	26
BsuRI	GGCC	1 cut(s)	152
BsuTUI	ATCGAT	1 cut(s)	426
BtgI	CCRYGG	3 cut(s)	526, 710, 1633
BtsCI	GGATG	4 cut(s)	454, 544, 851, 1507
BtsI	GCAGTG	1 cut(s)	981
BtsIMutI	CAGTG	2 cut(s)	981, 1602
Cac8I	GCNNGC	3 cut(s)	40, 865, 1383
CaiI	CAGNNNCTG	3 cut(s)	935, 1421, 1666
CciI	TCATGA	1 cut(s)	1231
CfoI	GCGC	2 cut(s)	93, 1312
Cfr13I	GGNCC	1 cut(s)	1552
ClaI	ATCGAT	1 cut(s)	426
CseI	GACGC	1 cut(s)	1654
CsiI	ACCWGGT	1 cut(s)	45
Csp6I	GTAC	5 cut(s)	50, 586, 626, 813, 1461
CviAII	CATG	6 cut(s)	196, 527, 875, 1163, 1232, 1634
CviQI	GTAC	5 cut(s)	50, 586, 626, 813, 1461
DdeI	CTNAG	8 cut(s)	816, 909, 989, 1074, 1123, 1237, 1414, 1563
DpnI	GATC	6 cut(s)	76, 144, 222, 295, 890, 1527
DpnII	GATC	6 cut(s)	74, 142, 220, 293, 888, 1525
DriI	GACNNNNNGTC	1 cut(s)	1719
EaeI	YGGCCR	1 cut(s)	150
Eam1104I	CTCTTC	3 cut(s)	80, 98, 950
Eam1105I	GACNNNNNGTC	1 cut(s)	1719
EarI	CTCTTC	3 cut(s)	80, 98, 950
EciI	GGCGGA	1 cut(s)	67
Eco105I	TACGTA	1 cut(s)	1522
Eco130I	CCWWGG	3 cut(s)	526, 617, 1633
Eco31I	GGTCTC	1 cut(s)	448
Eco32I	GATATC	2 cut(s)	424, 1569
Eco47I	GGWCC	1 cut(s)	1552
Eco57I	CTGAAG	2 cut(s)	385, 1443
EcoRI	GAATTC	2 cut(s)	239, 1398
EcoRII	CCWGG	2 cut(s)	45, 1089
EcoRV	GATATC	2 cut(s)	424, 1569
EcoT14I	CCWWGG	3 cut(s)	526, 617, 1633
EcoT22I	ATGCAT	1 cut(s)	825
ErhI	CCWWGG	3 cut(s)	526, 617, 1633
FaeI	CATG	6 cut(s)	199, 530, 878, 1166, 1235, 1637
FaqI	GGGAC	3 cut(s)	288, 653, 1173
FatI	CATG	6 cut(s)	195, 526, 874, 1162, 1231, 1633
FauI	CCCGC	1 cut(s)	603
FblI	GTMKAC	1 cut(s)	1405
FokI	GGATG	4 cut(s)	461, 551, 838, 1514
FspBI	CTAG	4 cut(s)	618, 669, 1146, 1356
GlaI	GCGC	2 cut(s)	92, 1311
GsaI	CCCAGC	1 cut(s)	1122
GsuI	CTGGAG	1 cut(s)	1709
HaeII	RGCGCY	1 cut(s)	1313
HaeIII	GGCC	1 cut(s)	152
HapII	CCGG	4 cut(s)	82, 245, 419, 1348
HgaI	GACGC	1 cut(s)	1654
HhaI	GCGC	2 cut(s)	93, 1312
Hin1II	CATG	6 cut(s)	199, 530, 878, 1166, 1235, 1637
Hin6I	GCGC	2 cut(s)	91, 1310
HinP1I	GCGC	2 cut(s)	91, 1310
HincII	GTYRAC	2 cut(s)	1143, 1406
HindII	GTYRAC	2 cut(s)	1143, 1406
HindIII	AAGCTT	1 cut(s)	1484
HpaI	GTTAAC	1 cut(s)	1143
HpaII	CCGG	4 cut(s)	82, 245, 419, 1348
HphI	GGTGA	5 cut(s)	443, 584, 606, 976, 1142
Hpy166II	GTNNAC	5 cut(s)	1143, 1367, 1406, 1555, 1681
Hpy188I	TCNGA	7 cut(s)	700, 784, 1014, 1062, 1126, 1225, 1255
Hpy8I	GTNNAC	5 cut(s)	1143, 1367, 1406, 1555, 1681
Hpy99I	CGWCG	1 cut(s)	1407
HpyAV	CCTTC	4 cut(s)	63, 1064, 1353, 1461
HpyCH4III	ACNGT	8 cut(s)	157, 518, 625, 711, 806, 943, 1140, 1704
HpyCH4IV	ACGT	1 cut(s)	1521
HpyCH4V	TGCA	8 cut(s)	62, 137, 437, 730, 823, 1388, 1660, 1669
HpyF10VI	GCNNNNNNNGC	6 cut(s)	158, 1378, 1600, 1657, 1666, 1669
HpyF3I	CTNAG	8 cut(s)	816, 909, 989, 1074, 1123, 1237, 1414, 1563
HpySE526I	ACGT	1 cut(s)	1521
Hsp92II	CATG	6 cut(s)	199, 530, 878, 1166, 1235, 1637
HspAI	GCGC	2 cut(s)	91, 1310
KpnI	GGTACC	1 cut(s)	53
KspAI	GTTAAC	1 cut(s)	1143
Kzo9I	GATC	6 cut(s)	74, 142, 220, 293, 888, 1525
LmnI	GCTCC	3 cut(s)	741, 1174, 1690
LweI	GCATC	7 cut(s)	370, 424, 439, 810, 860, 1492, 1647
MabI	ACCWGGT	1 cut(s)	45
MaeI	CTAG	4 cut(s)	618, 669, 1146, 1356
MaeII	ACGT	1 cut(s)	1521
MaeIII	GTNAC	7 cut(s)	362, 601, 790, 1037, 1148, 1276, 1725
MalI	GATC	6 cut(s)	76, 144, 222, 295, 890, 1527
MboI	GATC	6 cut(s)	74, 142, 220, 293, 888, 1525
MfeI	CAATTG	2 cut(s)	138, 507
MflI	RGATCY	3 cut(s)	74, 293, 1525
MhlI	GDGCHC	2 cut(s)	70, 983
MlsI	TGGCCA	1 cut(s)	152
MluCI	AATT	8 cut(s)	26, 138, 239, 507, 547, 718, 1319, 1398
MluNI	TGGCCA	1 cut(s)	152
MlyI	GAGTC	6 cut(s)	310, 863, 1088, 1229, 1250, 1629
MmeI	TCCRAC	1 cut(s)	1197
Mox20I	TGGCCA	1 cut(s)	152
Mph1103I	ATGCAT	1 cut(s)	825
MscI	TGGCCA	1 cut(s)	152
MseI	TTAA	2 cut(s)	1142, 1482
MslI	CAYNNNNRTG	3 cut(s)	15, 597, 1167
Msp20I	TGGCCA	1 cut(s)	152
MspA1I	CMGCKG	1 cut(s)	1666
MspI	CCGG	4 cut(s)	82, 245, 419, 1348
MspR9I	CCNGG	5 cut(s)	47, 82, 245, 1091, 1348
MunI	CAATTG	2 cut(s)	138, 507
Mva1269I	GAATGC	1 cut(s)	694
MvaI	CCWGG	2 cut(s)	47, 1091
MvnI	CGCG	1 cut(s)	598
MwoI	GCNNNNNNNGC	6 cut(s)	158, 1378, 1600, 1657, 1666, 1669
NciI	CCSGG	3 cut(s)	82, 245, 1348
NcoI	CCATGG	2 cut(s)	526, 1633
NdeII	GATC	6 cut(s)	74, 142, 220, 293, 888, 1525
NlaIII	CATG	6 cut(s)	199, 530, 878, 1166, 1235, 1637
NlaIV	GGNNCC	2 cut(s)	51, 906
NmuCI	GTSAC	3 cut(s)	1037, 1148, 1276
NsiI	ATGCAT	1 cut(s)	825
NspI	RCATGY	1 cut(s)	1166
OliI	CACNNNNGTG	1 cut(s)	597
PagI	TCATGA	1 cut(s)	1231
PcsI	WCGNNNNNNNCGW	1 cut(s)	1399
PctI	GAATGC	1 cut(s)	694
PfeI	GAWTC	6 cut(s)	312, 648, 785, 925, 1220, 1286
PflFI	GACNNNGTC	1 cut(s)	1702
PflMI	CCANNNNNTGG	1 cut(s)	509
PfoI	TCCNGGA	2 cut(s)	243, 1346
PleI	GAGTC	6 cut(s)	309, 863, 1088, 1229, 1250, 1628
PpsI	GAGTC	6 cut(s)	309, 863, 1088, 1229, 1250, 1628
Ppu21I	YACGTR	1 cut(s)	1522
PshAI	GACNNNNGTC	1 cut(s)	169
Psp6I	CCWGG	2 cut(s)	45, 1089
PspFI	CCCAGC	1 cut(s)	1118
PspGI	CCWGG	2 cut(s)	45, 1089
PspN4I	GGNNCC	2 cut(s)	51, 906
PspPI	GGNCC	1 cut(s)	1552
PstI	CTGCAG	1 cut(s)	1671
PstNI	CAGNNNCTG	3 cut(s)	935, 1421, 1666
PsuI	RGATCY	3 cut(s)	74, 293, 1525
PsyI	GACNNNGTC	1 cut(s)	1702
PvuII	CAGCTG	1 cut(s)	1666
RsaI	GTAC	5 cut(s)	51, 587, 627, 814, 1462
RsaNI	GTAC	5 cut(s)	50, 586, 626, 813, 1461
RseI	CAYNNNNRTG	3 cut(s)	15, 597, 1167
SalI	GTCGAC	1 cut(s)	1404
SaqAI	TTAA	2 cut(s)	1142, 1482
Sau3AI	GATC	6 cut(s)	74, 142, 220, 293, 888, 1525
Sau96I	GGNCC	1 cut(s)	1552
SchI	GAGTC	6 cut(s)	310, 863, 1088, 1229, 1250, 1629
ScrFI	CCNGG	5 cut(s)	47, 82, 245, 1091, 1348
SduI	GDGCHC	2 cut(s)	70, 983
SexAI	ACCWGGT	1 cut(s)	45
SfaNI	GCATC	7 cut(s)	370, 424, 439, 810, 860, 1492, 1647
SfcI	CTRYAG	1 cut(s)	1667
SinI	GGWCC	1 cut(s)	1552
SmiMI	CAYNNNNRTG	3 cut(s)	15, 597, 1167
SmlI	CTYRAG	1 cut(s)	1529
SmoI	CTYRAG	1 cut(s)	1529
SnaBI	TACGTA	1 cut(s)	1522
SpeI	ACTAGT	1 cut(s)	1145
Sse9I	AATT	8 cut(s)	26, 138, 239, 507, 547, 718, 1319, 1398
SsiI	CCGC	5 cut(s)	78, 309, 596, 1513, 1601
SspMI	CTAG	4 cut(s)	618, 669, 1146, 1356
StyD4I	CCNGG	5 cut(s)	45, 80, 243, 1089, 1346
StyI	CCWWGG	3 cut(s)	526, 617, 1633
TaaI	ACNGT	8 cut(s)	157, 518, 625, 711, 806, 943, 1140, 1704
TaiI	ACGT	1 cut(s)	1524
TaqI	TCGA	4 cut(s)	99, 426, 1405, 1497
TasI	AATT	8 cut(s)	26, 138, 239, 507, 547, 718, 1319, 1398
TatI	WGTACW	1 cut(s)	585
TauI	GCSGC	1 cut(s)	1603
TfiI	GAWTC	6 cut(s)	312, 648, 785, 925, 1220, 1286
Tru1I	TTAA	2 cut(s)	1142, 1482
Tru9I	TTAA	2 cut(s)	1142, 1482
TscAI	CASTG	2 cut(s)	981, 1602
TseFI	GTSAC	3 cut(s)	1037, 1148, 1276
Tsp45I	GTSAC	3 cut(s)	1037, 1148, 1276
TspDTI	ATGAA	3 cut(s)	585, 907, 1046
TspGWI	ACGGA	3 cut(s)	778, 901, 1025
TspRI	CASTG	2 cut(s)	981, 1602
Tth111I	GACNNNGTC	1 cut(s)	1702
Van91I	CCANNNNNTGG	1 cut(s)	509
VpaK11BI	GGWCC	1 cut(s)	1552
XapI	RAATTY	4 cut(s)	26, 239, 547, 1398
XbaI	TCTAGA	2 cut(s)	668, 1355
XceI	RCATGY	1 cut(s)	1166
XmaJI	CCTAGG	1 cut(s)	617
XmiI	GTMKAC	1 cut(s)	1405
XspI	CTAG	4 cut(s)	618, 669, 1146, 1356
Zsp2I	ATGCAT	1 cut(s)	825

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.