Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0002294

Physical Location & Seq

Genomic Coordinates Forward (+)

71386397 .. 71394699

Gene Structure 8303 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG444900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGCTCATTTTTCTTTGTGATTTTCAGAGAAGGAGTACAATTAGCAAGAGAATTGAAGACAGTTCAATGGGCGCATTTGACTTATTGGCCACCGTAGCTGGCAAGTTATTGCTTGAGGGAGAGAGTTCTCCTGCTTCCAGTCATACATCGTCTGGAAAAGAAAAGTGTTCAATCATTAATGACAGTTGTCTGAATGGAGACAAGCCATTGAAAGTGGAACCTTGTGATCAAGGTAGCTGTGACAGGAAATTCTTTGTGTCTGATAATATCTCACAGGGTCATAATCAAAGTTGCAGCTCAAAGGAGTCTCCAGTTCATCAGAATGAAAGCCATTCTGTAATGACAACTTCTAATTGCTTGGAGAGGTTTGTTTCTGATATGTTGGTGGGTGGAAAATGTAAGAATGAAATAGGAAGTTTTACTAGCAAAGTACAGGCAGGCTCCTCAGTGTACAGGGAGTCTGGTGAATGTAAATTAGATGGTGAAGCTAAAGTAATAGTAAAAGATGAGACTAATAAGAGGGGGGAGGTGCTAATTGGTACTGGGGCTGATATGTGCAGTTTAGAGGACCCTATGGTCTGGGAAGGGGAACCTCCCGCACTAGTCAGTTCAGATAGTAGTACCAAGGTGCCTATTTGTGTAGACCATATCCCTCAGAAACCTATCCTTGCTAGCAGGGATGATGTAAAAATAGTTAGTAGAGATGATGACGAAAATTCCTCTGGGTGTACTCACCCTAGTACCACCACAAGGTATCTAAGGACTGCACAGCGGATTGGTGACCGAAGAATAAGGAAAGTATTGGCTTCGAGGTATTGGAAAGCAGCTCCAAAGATGAAGGATGGGGCACATTCTAATTCTTATAGGGATATGCGACCAATTTACCATGGCAGGAAGAATGGTTACAAACGCCAGAGATCTCAGATGAATATGCCTTTTAAGAAGAGGAGGCTTTTTGACCGTAGCACAGTTCTAAAATCCAATGGAGGTATTAGTAGTGAGAGCTTCTTTGACTCAGCCAATGCGATATCTTCTTCAGTAGCAGGTCAACATTCAGTTTTCCAATCTAGGAATTCTCATGTGAAGCTCAGGATCAAGTCCTTCAGGGTGCCAGAACTATTCATTGAAATTCCAGAGACTGCAACCGTTGGTTCATTGAAGAAGACTGTTATGGATGCAGTAACAGCTGTACTTGGCGGTGGATTGTGTGTTGGTGTCCTTCTTCAGGGAAAGAAATTAAGAGATGACACTAAAACTCTACAACAGACAGGAATTTCTCAAGATGACCAGCTAGATTCTTTGGGATTTACTTTGGAACCTAACCCTCCGCACACTCCCACACCGCTATGTTCTGGAGATTCTCCCCGTATGCTTCCTTGCGACGTACTTCAGCCTTTAACAAGGTATGCACCTGATCCTAGTAGTGAAGCCTCACTCGAGCCTCATATGGCTGCTTTAGGAAGCTTCATCGAAAGTGATCATGATTCAGCACCCTCTCCAACCGATACGTCCGCTGACAAAAGCACGACAGATTCTAAAGCTCTGGTTGTTGTGCCAGAAATGAGTGCAGAGGCACTAGCTGTAGTTCCTGGGAACAGGAAATCAAAGCGGTTTGATATTGGGCAGCGCCGAATTCGTCGACCCTTCTCTGTTGCTGAAGTGGAAGCACTTGTTCAGGCAGTTGAGAAACTTGGTACTGGAAGATGGCGTGATGTGAAGATGCGAGCTTTTGAAAATGCCAAGCATCGAACTTATGTGGATTTGAAGGATAAGTGGAAAACACTAGTGCACACGGCAAGAATATCTCCTCAACAAAGGAGAGGTGAGCCTGTCCCCCAGGAACTCTTGGACCGGGTCCTTACCGCGCATGCTTACTGGTCCCAGCAGCAAGCGAAGCAACAGCTCAAACATCCCGAGAGCTGTGTTCTGGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0000228 GO:0000723 GO:0000781 GO:0000782 GO:0000783 GO:0000784 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003691 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005694 GO:0005737 GO:0005886 GO:0006139 GO:0006259 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008301 GO:0009628 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009737 GO:0009739 GO:0009751 GO:0009753 GO:0009755 GO:0009873 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0012505 GO:0014070 GO:0016020 GO:0016043 GO:0023052 GO:0031090 GO:0031627 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032200 GO:0032870 GO:0032991 GO:0032993 GO:0033993 GO:0034641 GO:0035556 GO:0042162 GO:0042221 GO:0042493 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0046677 GO:0046686 GO:0050789 GO:0050794 GO:0050896 GO:0051276 GO:0051716 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0070887 GO:0071310 GO:0071369 GO:0071495 GO:0071704 GO:0071840 GO:0071944 GO:0090304 GO:0097159 GO:0097305 GO:0098687 GO:1901360 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

644

Amino Acids

71.01

Weight (kDa)

8.83

Isoelectric Point (pI)

54.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ubiquitin_TPR1	PF23603	360 - 428	1.2e-38	Telomere repeat-binding protein 1-like, ubiquitin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002294)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07540 AT3G46590 AT3G46590 AT3G46590 AT3G46590 AT3G46590 AT5G59430 AT5G59430 AT5G59430 AT5G59430 AT5G59430
fragaria_vesca	FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520 FvH4_3g36520
malus_domestica	MD03G1089900.v1.1 MD11G1099200.v1.1
prunus_persica	Prupe.6G074100_v2.0.a1 Prupe.6G074100_v2.0.a1
pyrus_communis	pycom03g07150 pycom11g08340
rosa_chinensis	RchiOBHm_Chr5g0065391 RchiOBHm_Chr5g0065401 RchiOBHm_Chr5g0065451
rosa_laevigata	RLG00000035788
rosa_multiflora	Rmu_sc0001010.1_g000092
rosa_roxburghii	Rroxscaffold_1G00015800
rosa_rugosa	Rorug05G0371900 Rorug05G0372000 Rorug05G0372100 Rorug05G0372100
rosa_samantha	Rh5AG429700 Rh5BG444900 Rh5CG467200 Rh5DG457400
rosa_wichuraiana	Rw5G040330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	575
Acc36I	ACCTGC	1 cut(s)	1034
AccB1I	GGYRCC	2 cut(s)	628, 1108
AccI	GTMKAC	2 cut(s)	642, 1639
AccII	CGCG	1 cut(s)	1865
AciI	CCGC	8 cut(s)	597, 772, 1197, 1328, 1343, 1512, 1609, 1863
AclWI	GGATC	2 cut(s)	1100, 1409
AcoI	YGGCCR	1 cut(s)	87
AcsI	RAATTY	6 cut(s)	248, 715, 1072, 1128, 1272, 1632
AcuI	CTGAAG	5 cut(s)	1020, 1087, 1208, 1373, 1677
AfiI	CCNNNNNNNGG	2 cut(s)	750, 1225
AgsI	TTSAA	8 cut(s)	56, 66, 171, 211, 1127, 1159, 1733, 1765
AhlI	ACTAGT	2 cut(s)	601, 1783
AjnI	CCWGG	2 cut(s)	1588, 1836
Alw21I	GWGCWC	1 cut(s)	1791
Alw26I	GTCTC	4 cut(s)	192, 312, 503, 1130
Alw44I	GTGCAC	1 cut(s)	1787
AlwI	GGATC	2 cut(s)	1100, 1409
AlwNI	CAGNNNCTG	1 cut(s)	1139
Ama87I	CYCGRG	2 cut(s)	1436, 1913
AoxI	GGCC	1 cut(s)	87
ApaLI	GTGCAC	1 cut(s)	1787
ApeKI	GCWGC	5 cut(s)	294, 824, 1451, 1624, 1885
ApoI	RAATTY	6 cut(s)	248, 715, 1072, 1128, 1272, 1632
AseI	ATTAAT	1 cut(s)	177
AspLEI	GCGC	3 cut(s)	74, 1629, 1867
AspS9I	GGNCC	4 cut(s)	568, 1849, 1855, 1878
AsuC2I	CCSGG	1 cut(s)	1853
AsuHPI	GGTGA	5 cut(s)	476, 494, 725, 791, 1835
AsuNHI	GCTAGC	1 cut(s)	671
AvaI	CYCGRG	2 cut(s)	1436, 1913
AvaII	GGWCC	4 cut(s)	568, 1849, 1855, 1878
BaeGI	GKGCMC	2 cut(s)	850, 1791
BaeI	ACNNNNGTAYC	2 cut(s)	724, 757
BalI	TGGCCA	1 cut(s)	89
BanI	GGYRCC	2 cut(s)	628, 1108
BarI	GAAGNNNNNNTAC	2 cut(s)	887, 919
BbsI	GAAGAC	2 cut(s)	63, 1169
Bbv12I	GWGCWC	1 cut(s)	1791
BbvI	GCAGC	5 cut(s)	306, 836, 1438, 1636, 1897
BccI	CCATC	3 cut(s)	473, 836, 1698
BceAI	ACGGC	1 cut(s)	1809
BciT130I	CCWGG	2 cut(s)	1590, 1838
BclI	TGATCA	2 cut(s)	226, 1477
BcnI	CCSGG	1 cut(s)	1853
BcoDI	GTCTC	4 cut(s)	192, 312, 503, 1130
BcuI	ACTAGT	2 cut(s)	601, 1783
BfaI	CTAG	9 cut(s)	423, 602, 672, 738, 1068, 1292, 1419, 1577, 1784
BfmI	CTRYAG	1 cut(s)	1581
BfoI	RGCGCY	1 cut(s)	1630
BfuAI	ACCTGC	1 cut(s)	1034
BglII	AGATCT	1 cut(s)	917
BisI	GCNGC	5 cut(s)	295, 825, 1452, 1625, 1886
BlsI	GCNGC	5 cut(s)	296, 826, 1453, 1626, 1887
Bme1390I	CCNGG	3 cut(s)	1590, 1838, 1853
Bme18I	GGWCC	4 cut(s)	568, 1849, 1855, 1878
BmeT110I	CYCGRG	2 cut(s)	1436, 1913
BmgT120I	GGNCC	4 cut(s)	568, 1849, 1855, 1878
BmiI	GGNNCC	9 cut(s)	219, 442, 570, 591, 630, 1110, 1317, 1856, 1880
BmrFI	CCNGG	3 cut(s)	1590, 1838, 1853
BmrI	ACTGGG	1 cut(s)	552
BmsI	GCATC	3 cut(s)	1165, 1710, 1753
BmtI	GCTAGC	1 cut(s)	675
BmuI	ACTGGG	1 cut(s)	552
BoxI	GACNNNNGTC	1 cut(s)	186
BpiI	GAAGAC	2 cut(s)	63, 1169
BpmI	CTGGAG	2 cut(s)	294, 1374
Bpu10I	CCTNAGC	1 cut(s)	1088
BpuEI	CTTGAG	2 cut(s)	134, 1263
BpuMI	CCSGG	1 cut(s)	1853
BsaJI	CCNNGG	4 cut(s)	624, 886, 1589, 1836
Bsc4I	CCNNNNNNNGG	2 cut(s)	750, 1225
Bse1I	ACTGG	5 cut(s)	138, 311, 547, 1702, 1880
BseBI	CCWGG	2 cut(s)	1590, 1838
BseDI	CCNNGG	4 cut(s)	624, 886, 1589, 1836
BseGI	GGATG	4 cut(s)	685, 847, 1180, 1909
BseLI	CCNNNNNNNGG	2 cut(s)	750, 1225
BseMII	CTCAG	5 cut(s)	459, 668, 935, 1029, 1102
BseNI	ACTGG	5 cut(s)	138, 311, 547, 1702, 1880
BseRI	GAGGAG	3 cut(s)	433, 961, 1797
BseSI	GKGCMC	2 cut(s)	850, 1791
BseXI	GCAGC	5 cut(s)	306, 836, 1438, 1636, 1897
BseYI	CCCAGC	1 cut(s)	1881
BsgI	GTGCAG	3 cut(s)	577, 750, 1587
Bsh1236I	CGCG	1 cut(s)	1865
BshFI	GGCC	1 cut(s)	89
BshNI	GGYRCC	2 cut(s)	628, 1108
BsiHKAI	GWGCWC	1 cut(s)	1791
BsiHKCI	CYCGRG	2 cut(s)	1436, 1913
BsiSI	CCGG	1 cut(s)	1852
BslFI	GGGAC	2 cut(s)	1817, 1864
BslI	CCNNNNNNNGG	2 cut(s)	750, 1225
BsmAI	GTCTC	4 cut(s)	192, 312, 503, 1130
BsmFI	GGGAC	2 cut(s)	1817, 1864
BsnI	GGCC	1 cut(s)	89
BsoBI	CYCGRG	2 cut(s)	1436, 1913
Bsp1286I	GDGCHC	2 cut(s)	850, 1791
Bsp1407I	TGTACA	1 cut(s)	450
Bsp143I	GATC	5 cut(s)	226, 917, 1092, 1414, 1477
Bsp19I	CCATGG	1 cut(s)	886
BspACI	CCGC	8 cut(s)	597, 772, 1197, 1328, 1343, 1512, 1609, 1863
BspANI	GGCC	1 cut(s)	89
BspCNI	CTCAG	5 cut(s)	458, 667, 934, 1028, 1101
BspFNI	CGCG	1 cut(s)	1865
BspHI	TCATGA	1 cut(s)	1480
BspLI	GGNNCC	9 cut(s)	219, 442, 570, 591, 630, 1110, 1317, 1856, 1880
BspMI	ACCTGC	1 cut(s)	1034
BspOI	GCTAGC	1 cut(s)	675
BspPI	GGATC	2 cut(s)	1100, 1409
BspT107I	GGYRCC	2 cut(s)	628, 1108
BsrGI	TGTACA	1 cut(s)	450
BsrI	ACTGG	5 cut(s)	138, 311, 547, 1702, 1880
BssECI	CCNNGG	4 cut(s)	624, 886, 1589, 1836
BssMI	GATC	5 cut(s)	226, 917, 1092, 1414, 1477
BssT1I	CCWWGG	2 cut(s)	624, 886
Bst2UI	CCWGG	2 cut(s)	1590, 1838
Bst4CI	ACNGT	7 cut(s)	62, 94, 185, 962, 970, 1147, 1168
Bst6I	CTCTTC	1 cut(s)	938
BstAUI	TGTACA	1 cut(s)	450
BstC8I	GCNNGC	6 cut(s)	100, 439, 673, 1725, 1869, 1890
BstDEI	CTNAG	6 cut(s)	445, 654, 758, 921, 1015, 1088
BstDSI	CCRYGG	1 cut(s)	886
BstEII	GGTNACC	1 cut(s)	779
BstENI	CCTNNNNNAGG	1 cut(s)	1223
BstF5I	GGATG	4 cut(s)	685, 847, 1180, 1909
BstFNI	CGCG	1 cut(s)	1865
BstH2I	RGCGCY	1 cut(s)	1630
BstHHI	GCGC	3 cut(s)	74, 1629, 1867
BstKTI	GATC	5 cut(s)	229, 920, 1095, 1417, 1480
BstMAI	GTCTC	4 cut(s)	192, 312, 503, 1130
BstMBI	GATC	5 cut(s)	226, 917, 1092, 1414, 1477
BstMWI	GCNNNNNNNGC	3 cut(s)	95, 1184, 1894
BstNI	CCWGG	2 cut(s)	1590, 1838
BstNSI	RCATGY	1 cut(s)	1871
BstPAI	GACNNNNGTC	1 cut(s)	186
BstPI	GGTNACC	1 cut(s)	779
BstSCI	CCNGG	3 cut(s)	1588, 1836, 1851
BstSFI	CTRYAG	1 cut(s)	1581
BstSLI	GKGCMC	2 cut(s)	850, 1791
BstUI	CGCG	1 cut(s)	1865
BstV1I	GCAGC	5 cut(s)	306, 836, 1438, 1636, 1897
BstV2I	GAAGAC	2 cut(s)	63, 1169
BstX2I	RGATCY	1 cut(s)	917
BstYI	RGATCY	1 cut(s)	917
BsuRI	GGCC	1 cut(s)	89
BtgI	CCRYGG	1 cut(s)	886
BtsCI	GGATG	4 cut(s)	685, 847, 1180, 1909
BtsIMutI	CAGTG	1 cut(s)	453
BveI	ACCTGC	1 cut(s)	1034
Cac8I	GCNNGC	6 cut(s)	100, 439, 673, 1725, 1869, 1890
CaiI	CAGNNNCTG	1 cut(s)	1139
CciI	TCATGA	1 cut(s)	1480
CfoI	GCGC	3 cut(s)	74, 1629, 1867
Cfr13I	GGNCC	4 cut(s)	568, 1849, 1855, 1878
CviAII	CATG	4 cut(s)	887, 1079, 1481, 1868
DdeI	CTNAG	6 cut(s)	445, 654, 758, 921, 1015, 1088
DpnI	GATC	5 cut(s)	228, 919, 1094, 1416, 1479
DpnII	GATC	5 cut(s)	226, 917, 1092, 1414, 1477
DrdI	GACNNNNNNGTC	1 cut(s)	575
DseDI	GACNNNNNNGTC	1 cut(s)	575
EaeI	YGGCCR	1 cut(s)	87
Eam1104I	CTCTTC	1 cut(s)	938
EarI	CTCTTC	1 cut(s)	938
Eco130I	CCWWGG	2 cut(s)	624, 886
Eco32I	GATATC	1 cut(s)	1029
Eco47I	GGWCC	4 cut(s)	568, 1849, 1855, 1878
Eco57I	CTGAAG	5 cut(s)	1020, 1087, 1208, 1373, 1677
Eco88I	CYCGRG	2 cut(s)	1436, 1913
Eco91I	GGTNACC	1 cut(s)	779
EcoNI	CCTNNNNNAGG	1 cut(s)	1223
EcoO109I	RGGNCCY	2 cut(s)	568, 1855
EcoO65I	GGTNACC	1 cut(s)	779
EcoRI	GAATTC	2 cut(s)	1072, 1632
EcoRII	CCWGG	2 cut(s)	1588, 1836
EcoRV	GATATC	1 cut(s)	1029
EcoT14I	CCWWGG	2 cut(s)	624, 886
ErhI	CCWWGG	2 cut(s)	624, 886
FaeI	CATG	4 cut(s)	890, 1082, 1484, 1871
FaqI	GGGAC	2 cut(s)	1817, 1864
FatI	CATG	4 cut(s)	886, 1078, 1480, 1867
FauI	CCCGC	1 cut(s)	604
FauNDI	CATATG	1 cut(s)	1446
FbaI	TGATCA	2 cut(s)	226, 1477
FblI	GTMKAC	2 cut(s)	642, 1639
Fnu4HI	GCNGC	5 cut(s)	295, 825, 1452, 1625, 1886
FokI	GGATG	4 cut(s)	692, 854, 1187, 1896
Fsp4HI	GCNGC	5 cut(s)	295, 825, 1452, 1625, 1886
FspBI	CTAG	9 cut(s)	423, 602, 672, 738, 1068, 1292, 1419, 1577, 1784
GlaI	GCGC	3 cut(s)	73, 1628, 1866
GluI	GCNGC	5 cut(s)	295, 825, 1452, 1625, 1886
GsaI	CCCAGC	1 cut(s)	1885
GsuI	CTGGAG	2 cut(s)	294, 1374
HaeII	RGCGCY	1 cut(s)	1630
HaeIII	GGCC	1 cut(s)	89
HapII	CCGG	1 cut(s)	1852
HhaI	GCGC	3 cut(s)	74, 1629, 1867
Hin1II	CATG	4 cut(s)	890, 1082, 1484, 1871
Hin6I	GCGC	3 cut(s)	72, 1627, 1865
HinP1I	GCGC	3 cut(s)	72, 1627, 1865
HincII	GTYRAC	2 cut(s)	1049, 1640
HindII	GTYRAC	2 cut(s)	1049, 1640
HindIII	AAGCTT	1 cut(s)	1462
HinfI	GANTC	7 cut(s)	305, 458, 1013, 1295, 1358, 1484, 1532
HpaII	CCGG	1 cut(s)	1852
HphI	GGTGA	5 cut(s)	476, 494, 725, 791, 1835
Hpy166II	GTNNAC	6 cut(s)	451, 643, 729, 1049, 1640, 1789
Hpy188I	TCNGA	9 cut(s)	27, 192, 262, 321, 376, 613, 657, 924, 1934
Hpy188III	TCNNGA	7 cut(s)	153, 1090, 1133, 1280, 1353, 1481, 1913
Hpy8I	GTNNAC	6 cut(s)	451, 643, 729, 1049, 1640, 1789
Hpy99I	CGWCG	2 cut(s)	1385, 1641
HpyAV	CCTTC	7 cut(s)	24, 578, 832, 1111, 1229, 1654, 1759
HpyCH4III	ACNGT	7 cut(s)	62, 94, 185, 962, 970, 1147, 1168
HpyCH4IV	ACGT	2 cut(s)	1383, 1508
HpyCH4V	TGCA	8 cut(s)	294, 558, 767, 1142, 1178, 1409, 1568, 1789
HpyF10VI	GCNNNNNNNGC	3 cut(s)	95, 1184, 1894
HpyF3I	CTNAG	6 cut(s)	445, 654, 758, 921, 1015, 1088
HpySE526I	ACGT	2 cut(s)	1383, 1508
Hsp92II	CATG	4 cut(s)	890, 1082, 1484, 1871
HspAI	GCGC	3 cut(s)	72, 1627, 1865
Ksp22I	TGATCA	2 cut(s)	226, 1477
Kzo9I	GATC	5 cut(s)	226, 917, 1092, 1414, 1477
LmnI	GCTCC	2 cut(s)	446, 832
Lsp1109I	GCAGC	5 cut(s)	306, 836, 1438, 1636, 1897
LweI	GCATC	3 cut(s)	1165, 1710, 1753
MaeI	CTAG	9 cut(s)	423, 602, 672, 738, 1068, 1292, 1419, 1577, 1784
MaeII	ACGT	2 cut(s)	1383, 1508
MaeIII	GTNAC	4 cut(s)	239, 779, 902, 1180
MalI	GATC	5 cut(s)	228, 919, 1094, 1416, 1479
MboI	GATC	5 cut(s)	226, 917, 1092, 1414, 1477
MflI	RGATCY	1 cut(s)	917
MhlI	GDGCHC	2 cut(s)	850, 1791
MlsI	TGGCCA	1 cut(s)	89
MluNI	TGGCCA	1 cut(s)	89
MlyI	GAGTC	3 cut(s)	314, 467, 1007
MmeI	TCCRAC	1 cut(s)	1523
Mox20I	TGGCCA	1 cut(s)	89
MscI	TGGCCA	1 cut(s)	89
MseI	TTAA	4 cut(s)	177, 939, 1238, 1397
MslI	CAYNNNNRTG	2 cut(s)	321, 1345
Msp20I	TGGCCA	1 cut(s)	89
MspA1I	CMGCKG	3 cut(s)	772, 1187, 1514
MspI	CCGG	1 cut(s)	1852
MspR9I	CCNGG	3 cut(s)	1590, 1838, 1853
MvaI	CCWGG	2 cut(s)	1590, 1838
MvnI	CGCG	1 cut(s)	1865
MwoI	GCNNNNNNNGC	3 cut(s)	95, 1184, 1894
NciI	CCSGG	1 cut(s)	1853
NcoI	CCATGG	1 cut(s)	886
NdeI	CATATG	1 cut(s)	1446
NdeII	GATC	5 cut(s)	226, 917, 1092, 1414, 1477
NheI	GCTAGC	1 cut(s)	671
NlaIII	CATG	4 cut(s)	890, 1082, 1484, 1871
NlaIV	GGNNCC	9 cut(s)	219, 442, 570, 591, 630, 1110, 1317, 1856, 1880
NmuCI	GTSAC	2 cut(s)	239, 779
NspI	RCATGY	1 cut(s)	1871
PaeI	GCATGC	1 cut(s)	1871
PaeR7I	CTCGAG	1 cut(s)	1436
PagI	TCATGA	1 cut(s)	1480
PfeI	GAWTC	4 cut(s)	1295, 1358, 1484, 1532
PflFI	GACNNNGTC	1 cut(s)	1853
PkrI	GCNGC	5 cut(s)	296, 826, 1453, 1626, 1887
PleI	GAGTC	3 cut(s)	313, 466, 1007
PpsI	GAGTC	3 cut(s)	313, 466, 1007
PpuMI	RGGWCCY	2 cut(s)	568, 1855
PshAI	GACNNNNGTC	1 cut(s)	186
PshBI	ATTAAT	1 cut(s)	177
Psp5II	RGGWCCY	2 cut(s)	568, 1855
Psp6I	CCWGG	2 cut(s)	1588, 1836
PspEI	GGTNACC	1 cut(s)	779
PspFI	CCCAGC	1 cut(s)	1881
PspGI	CCWGG	2 cut(s)	1588, 1836
PspN4I	GGNNCC	9 cut(s)	219, 442, 570, 591, 630, 1110, 1317, 1856, 1880
PspPI	GGNCC	4 cut(s)	568, 1849, 1855, 1878
PspPPI	RGGWCCY	2 cut(s)	568, 1855
PspXI	VCTCGAGB	1 cut(s)	1436
PstNI	CAGNNNCTG	1 cut(s)	1139
PsuI	RGATCY	1 cut(s)	917
PsyI	GACNNNGTC	1 cut(s)	1853
PvuII	CAGCTG	1 cut(s)	1187
RseI	CAYNNNNRTG	2 cut(s)	321, 1345
SalI	GTCGAC	1 cut(s)	1638
SaqAI	TTAA	4 cut(s)	177, 939, 1238, 1397
SatI	GCNGC	5 cut(s)	295, 825, 1452, 1625, 1886
Sau3AI	GATC	5 cut(s)	226, 917, 1092, 1414, 1477
Sau96I	GGNCC	4 cut(s)	568, 1849, 1855, 1878
SchI	GAGTC	3 cut(s)	314, 467, 1007
ScrFI	CCNGG	3 cut(s)	1590, 1838, 1853
SduI	GDGCHC	2 cut(s)	850, 1791
SfaNI	GCATC	3 cut(s)	1165, 1710, 1753
SfcI	CTRYAG	1 cut(s)	1581
Sfr274I	CTCGAG	1 cut(s)	1436
SinI	GGWCC	4 cut(s)	568, 1849, 1855, 1878
SlaI	CTCGAG	1 cut(s)	1436
SmiMI	CAYNNNNRTG	2 cut(s)	321, 1345
SmlI	CTYRAG	3 cut(s)	113, 1278, 1436
SmoI	CTYRAG	3 cut(s)	113, 1278, 1436
SpeI	ACTAGT	2 cut(s)	601, 1783
SphI	GCATGC	1 cut(s)	1871
SsiI	CCGC	8 cut(s)	597, 772, 1197, 1328, 1343, 1512, 1609, 1863
SspMI	CTAG	9 cut(s)	423, 602, 672, 738, 1068, 1292, 1419, 1577, 1784
StyD4I	CCNGG	3 cut(s)	1588, 1836, 1851
StyI	CCWWGG	2 cut(s)	624, 886
TaaI	ACNGT	7 cut(s)	62, 94, 185, 962, 970, 1147, 1168
TaiI	ACGT	2 cut(s)	1386, 1511
TaqI	TCGA	5 cut(s)	809, 1437, 1470, 1639, 1747
TaqII	GACCGA	1 cut(s)	798
TatI	WGTACW	5 cut(s)	35, 430, 450, 728, 1189
TfiI	GAWTC	4 cut(s)	1295, 1358, 1484, 1532
Tru1I	TTAA	4 cut(s)	177, 939, 1238, 1397
Tru9I	TTAA	4 cut(s)	177, 939, 1238, 1397
TscAI	CASTG	1 cut(s)	453
TseFI	GTSAC	2 cut(s)	239, 779
TseI	GCWGC	5 cut(s)	294, 824, 1451, 1624, 1885
Tsp45I	GTSAC	2 cut(s)	239, 779
TspDTI	ATGAA	8 cut(s)	305, 339, 420, 851, 941, 1111, 1143, 1456
TspRI	CASTG	1 cut(s)	453
Tth111I	GACNNNGTC	1 cut(s)	1853
VneI	GTGCAC	1 cut(s)	1787
VpaK11BI	GGWCC	4 cut(s)	568, 1849, 1855, 1878
VspI	ATTAAT	1 cut(s)	177
XagI	CCTNNNNNAGG	1 cut(s)	1223
XapI	RAATTY	6 cut(s)	248, 715, 1072, 1128, 1272, 1632
XceI	RCATGY	1 cut(s)	1871
XhoI	CTCGAG	1 cut(s)	1436
XmiI	GTMKAC	2 cut(s)	642, 1639
XspI	CTAG	9 cut(s)	423, 602, 672, 738, 1068, 1292, 1419, 1577, 1784

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.