AT3G51710

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0013054
Physical Location & Seq
Forward (+)
19182289 .. 19184152
1864 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G51710.1

Sequence Viewer

Length: 1431 bp
ATGATGATGAAGTTCTATACGTTCACTTTCTTAATCTGCTTGTTCTCGAAGCTCCAAGGTCACTGCAAATCAGATATCAGCCTTGGCAATTCTCTGACGCTCACTTCTCCTCTAGAATACACTCCAGGGTTTATGGGGAAAGCTTATATCATAGAGACAGAATCATCGTCAACAAGAGAACCTGGTTTTAAAGCCGCGTTAACAATGGAATCAAGCGACAAAGATGATGGAAGATATTTATGTTCCCTTCAAATTTTCCTTGGAGATGTAAGAGTTTGGAGCTCAGGGCATTACTCAAAGATGTACGTTTCTAGCAAATGCATCATTGAGCTCACGAAAGATGGAGACTTGAGACTCAAGAGTAGCTATAAACACGTTGGATGGAGAAGTGGAACCTCAGGACAAGGCGTTGAGAGGTTGGAGATACAAAGCACAGGGAATCTAGTGTTGGTTGATGCTAAGAATCTGATCAAATGGCAAAGTTTCAATTTCCCAACAGATGTGATGTTGAGTGGTCAGAGACTAGACGTGGCTACGCAACTAACTTCATTCCCAAATGACTCGACTCTGTTCTATTCCTTTGAAGTCTTACGCGACAAGATTGCTCTGTTCCTAAATTTGAACAAGCTCAAGTACTCTTACTGGGAATACAAGCCTAGAGAGAAGAACACAACGGTCAACTTCGTGAGACTAGGGTTAAAGGGTCTTGACCTATTCGACGATAACAGTCGCATAATCGGAAGAATAGAGCAACCGTTGATCAGATTCTTGGCGCTTGGAAACAGAACCGGTAATTTAGGACTCTATTCGTATAAACCGGAAAAGGGAAAGTTCGAGGCAACGTTTCAAGCTGTGAGCGACACTTGTGATCTTCCTGTAGCGTGTAAACCATATGGAATCTGTACATTCTCAAAGTCTTGTTCTTGCATTAAGGTTGTAAGCAATGGATATTGCAGCAGCATCAACGGGGAAGAAGCTGTTTCAGTGAAGAGGCTATGTGATCATGAGATGGTTGAGCTAAATGGAGTCACTACAGTGCTAAGAAACGGGACACAAGTGAGAAACATAAGCAAAGAAAGATGTGAAGAGTTGTGTAAGAAAGATTGTGAGTGTGGAGCTGCGAGTTACTCTGTTTCTGAAGAGAGTTGTGTCATGTATGGGATAGTGATGGGTGTTAAACAGATTGAGAGAGTTAGTGGATTGAGTTATATGGTGAAGATTCCTAAAGGAGTGAGATTGAGTGATGAGAAATCTAATGTGAGAAAATGGGTGGTGGGATTAGTTGGAGGTATTGATGGTTTTGTGATTTTGTTGCTTATTTCTGGATTTGCTTTTTATTTCATTCGGAAGCGACGGAAAAGCTTGTTACTGCCGCCACCGCCACCGCCACCTCCACCGCTATCGCAGCAGCCGGCTAATACCGATTCTTGA

Protein Analysis

476

Amino Acids

53.23

Weight (kDa)

8.89

Isoelectric Point (pI)

43.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 104 - 178 2.9e-10 D-mannose binding lectin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G51710
fragaria_vesca FvH4_6g10470
malus_domestica MD04G1170300.v1.1 MD12G1184300.v1.1
prunus_persica Prupe.4G286300_v2.0.a1 Prupe.6G289100_v2.0.a1
pyrus_communis pycom12g17300
rosa_chinensis RchiOBHm_Chr3g0461371
rosa_laevigata RLG00000024937
rosa_multiflora Rmu_sc0002677.1_g000023
rosa_roxburghii Rroxscaffold_6G00418360 Rroxscaffold_6G00418660
rosa_rugosa Rorug03G0049700
rosa_samantha Rh3AG107800 Rh3BG111800 Rh3CG113600 Rh3DG113600
rosa_wichuraiana Rw3G009200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 197, 594
AciI CCGC 5 cut(s) 195, 1373, 1379, 1385, 1397
AclI AACGTT 1 cut(s) 842
AcsI RAATTY 2 cut(s) 252, 616
AcuI CTGAAG 1 cut(s) 1158
AfaI GTAC 3 cut(s) 305, 635, 904
AfiI CCNNNNNNNGG 1 cut(s) 824
AflIII ACRYGT 1 cut(s) 373
AgeI ACCGGT 1 cut(s) 788
AgsI TTSAA 5 cut(s) 251, 487, 584, 622, 848
AjiI CACGTC 1 cut(s) 529
AjnI CCWGG 2 cut(s) 124, 181
AjuI GAANNNNNNNTTGG 2 cut(s) 431, 463
AleI CACNNNNGTG 1 cut(s) 1034
Alw21I GWGCWC 2 cut(s) 284, 333
Alw26I GTCTC 5 cut(s) 149, 339, 346, 514, 682
ApeKI GCWGC 5 cut(s) 954, 957, 1118, 1405, 1408
ApoI RAATTY 2 cut(s) 252, 616
AsiGI ACCGGT 1 cut(s) 788
AspLEI GCGC 1 cut(s) 775
AsuHPI GGTGA 1 cut(s) 1225
AxyI CCTNAGG 1 cut(s) 397
BanII GRGCYC 2 cut(s) 284, 333
Bbv12I GWGCWC 2 cut(s) 284, 333
BbvI GCAGC 5 cut(s) 966, 969, 1105, 1417, 1420
BccI CCATC 6 cut(s) 221, 335, 375, 1003, 1162, 1289
BcgI CGANNNNNNTGC 2 cut(s) 584, 618
BciT130I CCWGG 2 cut(s) 126, 183
BclI TGATCA 3 cut(s) 468, 759, 1000
BcoDI GTCTC 5 cut(s) 149, 339, 346, 514, 682
BfaI CTAG 6 cut(s) 113, 312, 443, 524, 657, 692
BfmI CTRYAG 2 cut(s) 876, 1032
BfoI RGCGCY 1 cut(s) 776
BisI GCNGC 7 cut(s) 195, 955, 958, 1119, 1373, 1406, 1409
BlsI GCNGC 7 cut(s) 196, 956, 959, 1120, 1374, 1407, 1410
BmcAI AGTACT 1 cut(s) 635
Bme1390I CCNGG 2 cut(s) 126, 183
BmgBI CACGTC 1 cut(s) 529
BmiI GGNNCC 1 cut(s) 394
BmrFI CCNGG 2 cut(s) 126, 183
BmrI ACTGGG 1 cut(s) 652
BmsI GCATC 3 cut(s) 330, 445, 969
BmuI ACTGGG 1 cut(s) 652
BpmI CTGGAG 1 cut(s) 108
Bpu10I CCTNAGC 1 cut(s) 283
BpuEI CTTGAG 3 cut(s) 341, 370, 614
BsaJI CCNNGG 4 cut(s) 55, 82, 125, 259
BsaWI WCCGGW 2 cut(s) 788, 817
Bsc4I CCNNNNNNNGG 1 cut(s) 824
Bse118I RCCGGY 2 cut(s) 788, 1411
Bse1I ACTGG 1 cut(s) 647
Bse21I CCTNAGG 1 cut(s) 397
Bse3DI GCAATG 1 cut(s) 949
BseBI CCWGG 2 cut(s) 126, 183
BseDI CCNNGG 4 cut(s) 55, 82, 125, 259
BseGI GGATG 1 cut(s) 386
BseLI CCNNNNNNNGG 1 cut(s) 824
BseMI GCAATG 1 cut(s) 949
BseMII CTCAG 2 cut(s) 297, 411
BseNI ACTGG 1 cut(s) 647
BseRI GAGGAG 1 cut(s) 99
BseXI GCAGC 5 cut(s) 966, 969, 1105, 1417, 1420
Bsh1236I CGCG 2 cut(s) 197, 594
BshTI ACCGGT 1 cut(s) 788
BsiHKAI GWGCWC 2 cut(s) 284, 333
BsiSI CCGG 3 cut(s) 789, 818, 1412
BslFI GGGAC 1 cut(s) 1063
BslI CCNNNNNNNGG 1 cut(s) 824
BsmAI GTCTC 5 cut(s) 149, 339, 346, 514, 682
BsmFI GGGAC 1 cut(s) 1063
Bsp1286I GDGCHC 2 cut(s) 284, 333
Bsp1407I TGTACA 1 cut(s) 902
Bsp143I GATC 4 cut(s) 468, 759, 868, 1000
BspACI CCGC 5 cut(s) 195, 1373, 1379, 1385, 1397
BspCNI CTCAG 2 cut(s) 296, 410
BspFNI CGCG 2 cut(s) 197, 594
BspHI TCATGA 1 cut(s) 1003
BspLI GGNNCC 1 cut(s) 394
BsrDI GCAATG 1 cut(s) 949
BsrFI RCCGGY 2 cut(s) 788, 1411
BsrGI TGTACA 1 cut(s) 902
BsrI ACTGG 1 cut(s) 647
BssAI RCCGGY 2 cut(s) 788, 1411
BssECI CCNNGG 4 cut(s) 55, 82, 125, 259
BssMI GATC 4 cut(s) 468, 759, 868, 1000
BssT1I CCWWGG 3 cut(s) 55, 82, 259
Bst2UI CCWGG 2 cut(s) 126, 183
Bst4CI ACNGT 4 cut(s) 676, 728, 756, 1036
Bst6I CTCTTC 3 cut(s) 983, 1080, 1134
BstAUI TGTACA 1 cut(s) 902
BstC8I GCNNGC 1 cut(s) 1413
BstDEI CTNAG 4 cut(s) 283, 397, 459, 1040
BstF5I GGATG 1 cut(s) 386
BstFNI CGCG 2 cut(s) 197, 594
BstH2I RGCGCY 1 cut(s) 776
BstHHI GCGC 1 cut(s) 775
BstKTI GATC 4 cut(s) 471, 762, 871, 1003
BstMAI GTCTC 5 cut(s) 149, 339, 346, 514, 682
BstMBI GATC 4 cut(s) 468, 759, 868, 1000
BstMWI GCNNNNNNNGC 2 cut(s) 1378, 1405
BstNI CCWGG 2 cut(s) 126, 183
BstSCI CCNGG 2 cut(s) 124, 181
BstSFI CTRYAG 2 cut(s) 876, 1032
BstUI CGCG 2 cut(s) 197, 594
BstV1I GCAGC 5 cut(s) 966, 969, 1105, 1417, 1420
Bsu36I CCTNAGG 1 cut(s) 397
BtrI CACGTC 1 cut(s) 529
BtsCI GGATG 1 cut(s) 386
BtsI GCAGTG 1 cut(s) 61
BtsIMutI CAGTG 3 cut(s) 61, 990, 1041
Cac8I GCNNGC 1 cut(s) 1413
CciI TCATGA 1 cut(s) 1003
CfoI GCGC 1 cut(s) 775
Cfr10I RCCGGY 2 cut(s) 788, 1411
CseI GACGC 1 cut(s) 106
CsiI ACCWGGT 1 cut(s) 181
Csp6I GTAC 3 cut(s) 304, 634, 903
CspAI ACCGGT 1 cut(s) 788
CviAII CATG 2 cut(s) 1004, 1153
CviQI GTAC 3 cut(s) 304, 634, 903
DdeI CTNAG 4 cut(s) 283, 397, 459, 1040
DpnI GATC 4 cut(s) 470, 761, 870, 1002
DpnII GATC 4 cut(s) 468, 759, 868, 1000
DraI TTTAAA 1 cut(s) 190
Eam1104I CTCTTC 3 cut(s) 983, 1080, 1134
EarI CTCTTC 3 cut(s) 983, 1080, 1134
Ecl136II GAGCTC 2 cut(s) 282, 331
Eco130I CCWWGG 3 cut(s) 55, 82, 259
Eco24I GRGCYC 2 cut(s) 284, 333
Eco32I GATATC 1 cut(s) 76
Eco53kI GAGCTC 2 cut(s) 282, 331
Eco57I CTGAAG 1 cut(s) 1158
Eco81I CCTNAGG 1 cut(s) 397
EcoICRI GAGCTC 2 cut(s) 282, 331
EcoRII CCWGG 2 cut(s) 124, 181
EcoRV GATATC 1 cut(s) 76
EcoT14I CCWWGG 3 cut(s) 55, 82, 259
EcoT22I ATGCAT 1 cut(s) 323
EcoT38I GRGCYC 2 cut(s) 284, 333
ErhI CCWWGG 3 cut(s) 55, 82, 259
FaeI CATG 2 cut(s) 1007, 1156
FaqI GGGAC 1 cut(s) 1063
FatI CATG 2 cut(s) 1003, 1152
FauNDI CATATG 1 cut(s) 892
FbaI TGATCA 3 cut(s) 468, 759, 1000
Fnu4HI GCNGC 7 cut(s) 195, 955, 958, 1119, 1373, 1406, 1409
FokI GGATG 1 cut(s) 393
FriOI GRGCYC 2 cut(s) 284, 333
Fsp4HI GCNGC 7 cut(s) 195, 955, 958, 1119, 1373, 1406, 1409
FspBI CTAG 6 cut(s) 113, 312, 443, 524, 657, 692
GlaI GCGC 1 cut(s) 774
GluI GCNGC 7 cut(s) 195, 955, 958, 1119, 1373, 1406, 1409
GsuI CTGGAG 1 cut(s) 108
HaeII RGCGCY 1 cut(s) 776
HapII CCGG 3 cut(s) 789, 818, 1412
HgaI GACGC 1 cut(s) 106
HhaI GCGC 1 cut(s) 775
Hin1II CATG 2 cut(s) 1007, 1156
Hin6I GCGC 1 cut(s) 773
HinP1I GCGC 1 cut(s) 773
HincII GTYRAC 3 cut(s) 171, 201, 679
HindII GTYRAC 3 cut(s) 171, 201, 679
HindIII AAGCTT 2 cut(s) 141, 1360
HpaI GTTAAC 1 cut(s) 201
HpaII CCGG 3 cut(s) 789, 818, 1412
HphI GGTGA 1 cut(s) 1225
Hpy166II GTNNAC 5 cut(s) 24, 171, 201, 679, 887
Hpy188I TCNGA 8 cut(s) 73, 96, 468, 519, 740, 764, 1138, 1347
Hpy8I GTNNAC 5 cut(s) 24, 171, 201, 679, 887
Hpy99I CGWCG 2 cut(s) 722, 1356
HpyAV CCTTC 1 cut(s) 257
HpyCH4III ACNGT 4 cut(s) 676, 728, 756, 1036
HpyCH4IV ACGT 5 cut(s) 20, 306, 375, 528, 842
HpyCH4V TGCA 4 cut(s) 66, 321, 927, 954
HpyF10VI GCNNNNNNNGC 2 cut(s) 1378, 1405
HpyF3I CTNAG 4 cut(s) 283, 397, 459, 1040
HpySE526I ACGT 5 cut(s) 20, 306, 375, 528, 842
Hsp92II CATG 2 cut(s) 1007, 1156
HspAI GCGC 1 cut(s) 773
KroI GCCGGC 1 cut(s) 1411
KroNI GCCGGC 1 cut(s) 1413
Ksp22I TGATCA 3 cut(s) 468, 759, 1000
KspAI GTTAAC 1 cut(s) 201
Kzo9I GATC 4 cut(s) 468, 759, 868, 1000
LmnI GCTCC 3 cut(s) 57, 279, 1115
Lsp1109I GCAGC 5 cut(s) 966, 969, 1105, 1417, 1420
LweI GCATC 3 cut(s) 330, 445, 969
MabI ACCWGGT 1 cut(s) 181
MaeI CTAG 6 cut(s) 113, 312, 443, 524, 657, 692
MaeII ACGT 5 cut(s) 20, 306, 375, 528, 842
MaeIII GTNAC 4 cut(s) 59, 1027, 1124, 1365
MalI GATC 4 cut(s) 470, 761, 870, 1002
MboI GATC 4 cut(s) 468, 759, 868, 1000
MboII GAAGA 9 cut(s) 243, 676, 753, 863, 983, 1000, 1097, 1151, 1228
MhlI GDGCHC 2 cut(s) 284, 333
MluCI AATT 5 cut(s) 88, 252, 487, 616, 793
MlyI GAGTC 5 cut(s) 348, 554, 559, 795, 1035
MmeI TCCRAC 3 cut(s) 358, 399, 1264
MnlI CCTC 7 cut(s) 120, 406, 408, 829, 984, 1280, 1401
Mph1103I ATGCAT 1 cut(s) 323
MroNI GCCGGC 1 cut(s) 1411
MseI TTAA 6 cut(s) 32, 189, 200, 698, 930, 1176
MslI CAYNNNNRTG 1 cut(s) 1034
MspI CCGG 3 cut(s) 789, 818, 1412
MspR9I CCNGG 2 cut(s) 126, 183
MvaI CCWGG 2 cut(s) 126, 183
MvnI CGCG 2 cut(s) 197, 594
MwoI GCNNNNNNNGC 2 cut(s) 1378, 1405
NaeI GCCGGC 1 cut(s) 1413
NdeI CATATG 1 cut(s) 892
NdeII GATC 4 cut(s) 468, 759, 868, 1000
NgoMIV GCCGGC 1 cut(s) 1411
NlaIII CATG 2 cut(s) 1007, 1156
NlaIV GGNNCC 1 cut(s) 394
NmuCI GTSAC 2 cut(s) 59, 1027
NsiI ATGCAT 1 cut(s) 323
OliI CACNNNNGTG 1 cut(s) 1034
PagI TCATGA 1 cut(s) 1003
PdiI GCCGGC 1 cut(s) 1413
PfeI GAWTC 8 cut(s) 161, 209, 439, 463, 765, 897, 1219, 1424
PinAI ACCGGT 1 cut(s) 788
PkrI GCNGC 7 cut(s) 196, 956, 959, 1120, 1374, 1407, 1410
PleI GAGTC 5 cut(s) 348, 554, 559, 795, 1034
PpsI GAGTC 5 cut(s) 348, 554, 559, 795, 1034
Psp124BI GAGCTC 2 cut(s) 284, 333
Psp1406I AACGTT 1 cut(s) 842
Psp6I CCWGG 2 cut(s) 124, 181
PspGI CCWGG 2 cut(s) 124, 181
PspN4I GGNNCC 1 cut(s) 394
RsaI GTAC 3 cut(s) 305, 635, 904
RsaNI GTAC 3 cut(s) 304, 634, 903
RseI CAYNNNNRTG 1 cut(s) 1034
SacI GAGCTC 2 cut(s) 284, 333
SaqAI TTAA 6 cut(s) 32, 189, 200, 698, 930, 1176
SatI GCNGC 7 cut(s) 195, 955, 958, 1119, 1373, 1406, 1409
Sau3AI GATC 4 cut(s) 468, 759, 868, 1000
ScaI AGTACT 1 cut(s) 635
SchI GAGTC 5 cut(s) 348, 554, 559, 795, 1035
ScrFI CCNGG 2 cut(s) 126, 183
SduI GDGCHC 2 cut(s) 284, 333
SexAI ACCWGGT 1 cut(s) 181
SfaNI GCATC 3 cut(s) 330, 445, 969
SfcI CTRYAG 2 cut(s) 876, 1032
SmiMI CAYNNNNRTG 1 cut(s) 1034
SmlI CTYRAG 3 cut(s) 349, 356, 629
SmoI CTYRAG 3 cut(s) 349, 356, 629
Sse9I AATT 5 cut(s) 88, 252, 487, 616, 793
SsiI CCGC 5 cut(s) 195, 1373, 1379, 1385, 1397
SspMI CTAG 6 cut(s) 113, 312, 443, 524, 657, 692
SstI GAGCTC 2 cut(s) 284, 333
StyD4I CCNGG 2 cut(s) 124, 181
StyI CCWWGG 3 cut(s) 55, 82, 259
TaaI ACNGT 4 cut(s) 676, 728, 756, 1036
TaiI ACGT 5 cut(s) 23, 309, 378, 531, 845
TaqI TCGA 4 cut(s) 47, 563, 717, 834
TasI AATT 5 cut(s) 88, 252, 487, 616, 793
TatI WGTACW 2 cut(s) 633, 902
TauI GCSGC 2 cut(s) 197, 1375
TfiI GAWTC 8 cut(s) 161, 209, 439, 463, 765, 897, 1219, 1424
Tru1I TTAA 6 cut(s) 32, 189, 200, 698, 930, 1176
Tru9I TTAA 6 cut(s) 32, 189, 200, 698, 930, 1176
TscAI CASTG 3 cut(s) 68, 990, 1041
TseFI GTSAC 2 cut(s) 59, 1027
TseI GCWGC 5 cut(s) 954, 957, 1118, 1405, 1408
Tsp45I GTSAC 2 cut(s) 59, 1027
TspDTI ATGAA 3 cut(s) 23, 537, 1330
TspGWI ACGGA 1 cut(s) 1369
TspRI CASTG 3 cut(s) 68, 990, 1041
XapI RAATTY 2 cut(s) 252, 616
XbaI TCTAGA 1 cut(s) 112
XspI CTAG 6 cut(s) 113, 312, 443, 524, 657, 692
ZrmI AGTACT 1 cut(s) 635
Zsp2I ATGCAT 1 cut(s) 323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.