Prupe.4G286300_v2.0.a1

G-type lectin S-receptor-like serine threonine-protein kinase SD2-5

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
25089039 .. 25090846
1808 bp
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UTR
Exon/CDS
Intron
Prupe.4G286300.1

Sequence Viewer

Length: 1422 bp
ATGCAGCTCTATTTGTTCATTTCTCTCTCTCTTTTCTTCACTTATGGCCATTCCAAAACAGATATCTCTCTTGGGTACCAGCTCACTGTGGCAGTGCCCATTGAATACAGTTTAGGATTCATTGGGAGAGCATTTTTTATGGAGACAAATGAAATCACACAAACTTTTAAAACTGCATTAAGTGTTGAAGCTGTGAATGACAAATACTCATGCTCCTTGGAAGTCTTTCTTGGAGATGTCAAGGTTTGGAACTCTGGTCATCACTCAAAGTTTTATACTTCAAATATATGCGTCCTTCAACTCACCCAAGATGGAGATTTGAGGTTGAAGGGTCCAAAAGACAGAGTTGGATGGAGAACTGGGACTTCTGGACAAGGTGTGAAGAGGTTACAGATATTAAGGACAGGAAATTTAGTTCTGCTAGATGGGTTGGGCAATATCAAGTGGCAGAGTTTTAATTTTCCAACTGATGTAATGCTTTGGGGTCAGAGACTAAGTGTGGCTTCTAGGTTGATTTCATTTCCAACCAACTCCACTTCATACTACTCACTTGAAATTGAACAGAGCAGGATTGCTCTCTACTTGAATTCTGGTAAGTGGAACTATTCCTATTGGGAATTTAAGCCTACCAAGAACAGAAACATCGCTTATGTTCAATTGGGTCGCAAGGGTTTAGAGTTATTCAATGATAAACAAAAGAAAATTGCGGAGATTCATCCATCTGATCATCAAACAGTTCAGTTTGGTCAGCCCCTGAGGTTCTTAGCATTGGGGAACAGAACAGGAAATTTGAAGCTATATTTTTACTCACCCAGCATTGCTAAATTTGACGCTGCTTTTCAAGCACTCAACACCACATGTGATCTTCCATTGGCTTGTAAGCCTTATGGGATTTGCACCTTGTCCAGTGCTTGTTCATGCATTCAAGTTTTGATAGCCGAAAATGAGACCAGTAGAAGTGGTAATTCTGATTGCAGTCAAGGAATTTCAGGTGGGTTTTGTGGCAATGGCAAGACTAAAGCAGAGATGCTTGAATTAAAGGGTGTTGGTAGTGTTTTGAGGGGTGCTCCTAAAATAGTTAATGTGAGCAAAGAAGCATGTGCTAGTTTGTGCTTAGAAGACTGTAATTGTACATCTGCATTATATTCAACTGCAAAAGGAGGCATGGAAGTAGAAGAGTGCTTTCTTTATGGAATGGTAATTGGGGTTAAACAAGTTGAAAGGGGAAATGAATTGAGCTACATGGTTAAGGTTCGAAAAGCAGCTCATGGGGGCCATGGAAAGTCCAATTTGAAAAGGTGGGTTTTGGTCCTGGTGGGAGTGGTTGATGGGTTGATTATTCTTCTGGTTTTTGGAGGCCTTGGCTACTACATGATAAAGAAGAGAAGAAAACACACATTGCCTAATGGCCATAACAATTGA

Protein Analysis

474

Amino Acids

52.46

Weight (kDa)

9.21

Isoelectric Point (pI)

37.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013054)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 75
AccB1I GGYRCC 1 cut(s) 75
AciI CCGC 1 cut(s) 707
AcoI YGGCCR 2 cut(s) 46, 1408
AcsI RAATTY 6 cut(s) 409, 586, 617, 787, 824, 984
AfaI GTAC 2 cut(s) 77, 1132
AflIII ACRYGT 1 cut(s) 857
AjnI CCWGG 1 cut(s) 1311
AjuI GAANNNNNNNTTGG 2 cut(s) 213, 245
AloI GAACNNNNNNTCC 2 cut(s) 399, 431
AluBI AGCT 6 cut(s) 7, 82, 191, 796, 1239, 1265
AluI AGCT 6 cut(s) 7, 82, 191, 796, 1239, 1265
Alw21I GWGCWC 1 cut(s) 1069
Alw26I GTCTC 3 cut(s) 137, 484, 941
AlwNI CAGNNNCTG 1 cut(s) 754
AoxI GGCC 4 cut(s) 46, 1273, 1357, 1408
ApeKI GCWGC 3 cut(s) 4, 833, 1262
ApoI RAATTY 6 cut(s) 409, 586, 617, 787, 824, 984
Asp700I GAANNNNTTC 1 cut(s) 225
Asp718I GGTACC 1 cut(s) 75
AspS9I GGNCC 3 cut(s) 332, 1273, 1309
AsuHPI GGTGA 2 cut(s) 295, 801
AsuII TTCGAA 1 cut(s) 1255
AvaII GGWCC 2 cut(s) 332, 1309
AxyI CCTNAGG 1 cut(s) 755
BaeGI GKGCMC 1 cut(s) 99
BalI TGGCCA 2 cut(s) 48, 1410
BanI GGYRCC 1 cut(s) 75
BbsI GAAGAC 1 cut(s) 1125
Bbv12I GWGCWC 1 cut(s) 1069
BbvI GCAGC 3 cut(s) 16, 820, 1274
BccI CCATC 5 cut(s) 305, 345, 419, 727, 1322
BciT130I CCWGG 1 cut(s) 1313
BclI TGATCA 1 cut(s) 724
BcoDI GTCTC 3 cut(s) 137, 484, 941
BfaI CTAG 3 cut(s) 422, 507, 1104
BisI GCNGC 3 cut(s) 5, 834, 1263
BlsI GCNGC 3 cut(s) 6, 835, 1264
Bme1390I CCNGG 1 cut(s) 1313
Bme18I GGWCC 2 cut(s) 332, 1309
BmgT120I GGNCC 3 cut(s) 332, 1273, 1309
BmiI GGNNCC 3 cut(s) 77, 333, 1274
BmrFI CCNGG 1 cut(s) 1313
BmrI ACTGGG 1 cut(s) 369
BmsI GCATC 1 cut(s) 1017
BmuI ACTGGG 1 cut(s) 369
BpiI GAAGAC 1 cut(s) 1125
BplI GAGNNNNNCTC 2 cut(s) 1051, 1083
Bpu14I TTCGAA 1 cut(s) 1255
BsaI GGTCTC 1 cut(s) 941
BsaJI CCNNGG 3 cut(s) 216, 1276, 1360
BsaXI ACNNNNNCTCC 2 cut(s) 197, 227
Bse1I ACTGG 3 cut(s) 364, 906, 951
Bse21I CCTNAGG 1 cut(s) 755
Bse3DI GCAATG 3 cut(s) 816, 1012, 1397
BseBI CCWGG 1 cut(s) 1313
BseDI CCNNGG 3 cut(s) 216, 1276, 1360
BseGI GGATG 2 cut(s) 356, 715
BseMI GCAATG 3 cut(s) 816, 1012, 1397
BseMII CTCAG 1 cut(s) 746
BseNI ACTGG 3 cut(s) 364, 906, 951
BseSI GKGCMC 1 cut(s) 99
BseXI GCAGC 3 cut(s) 16, 820, 1274
BseYI CCCAGC 1 cut(s) 812
BshFI GGCC 4 cut(s) 48, 1275, 1359, 1410
BshNI GGYRCC 1 cut(s) 75
BsiHKAI GWGCWC 1 cut(s) 1069
BslFI GGGAC 1 cut(s) 376
BsmAI GTCTC 3 cut(s) 137, 484, 941
BsmFI GGGAC 1 cut(s) 376
BsmI GAATGC 1 cut(s) 921
BsnI GGCC 4 cut(s) 48, 1275, 1359, 1410
Bso31I GGTCTC 1 cut(s) 941
Bsp119I TTCGAA 1 cut(s) 1255
Bsp1286I GDGCHC 2 cut(s) 99, 1069
Bsp1407I TGTACA 1 cut(s) 1130
Bsp143I GATC 2 cut(s) 724, 862
Bsp19I CCATGG 1 cut(s) 1276
BspACI CCGC 1 cut(s) 707
BspANI GGCC 4 cut(s) 48, 1275, 1359, 1410
BspCNI CTCAG 1 cut(s) 747
BspLI GGNNCC 3 cut(s) 77, 333, 1274
BspT104I TTCGAA 1 cut(s) 1255
BspT107I GGYRCC 1 cut(s) 75
BspTNI GGTCTC 1 cut(s) 941
BsrDI GCAATG 3 cut(s) 816, 1012, 1397
BsrGI TGTACA 1 cut(s) 1130
BsrI ACTGG 3 cut(s) 364, 906, 951
BssECI CCNNGG 3 cut(s) 216, 1276, 1360
BssMI GATC 2 cut(s) 724, 862
BssT1I CCWWGG 3 cut(s) 216, 1276, 1360
Bst2UI CCWGG 1 cut(s) 1313
Bst4CI ACNGT 4 cut(s) 88, 110, 736, 1124
Bst6I CTCTTC 3 cut(s) 377, 1170, 1376
BstAUI TGTACA 1 cut(s) 1130
BstBI TTCGAA 1 cut(s) 1255
BstDEI CTNAG 4 cut(s) 494, 755, 763, 1114
BstDSI CCRYGG 1 cut(s) 1276
BstF5I GGATG 2 cut(s) 356, 715
BstKTI GATC 2 cut(s) 727, 865
BstMAI GTCTC 3 cut(s) 137, 484, 941
BstMBI GATC 2 cut(s) 724, 862
BstMWI GCNNNNNNNGC 1 cut(s) 842
BstNI CCWGG 1 cut(s) 1313
BstNSI RCATGY 2 cut(s) 861, 1101
BstSCI CCNGG 1 cut(s) 1311
BstSLI GKGCMC 1 cut(s) 99
BstV1I GCAGC 3 cut(s) 16, 820, 1274
BstV2I GAAGAC 1 cut(s) 1125
Bsu36I CCTNAGG 1 cut(s) 755
BsuRI GGCC 4 cut(s) 48, 1275, 1359, 1410
BtgI CCRYGG 1 cut(s) 1276
BtgZI GCGATG 1 cut(s) 628
BtsCI GGATG 2 cut(s) 356, 715
BtsI GCAGTG 1 cut(s) 99
BtsIMutI CAGTG 3 cut(s) 84, 99, 913
CaiI CAGNNNCTG 1 cut(s) 754
Cfr13I GGNCC 3 cut(s) 332, 1273, 1309
CseI GACGC 2 cut(s) 280, 839
Csp6I GTAC 2 cut(s) 76, 1131
CviAII CATG 9 cut(s) 210, 858, 918, 1098, 1165, 1243, 1268, 1277, 1372
CviQI GTAC 2 cut(s) 76, 1131
DdeI CTNAG 4 cut(s) 494, 755, 763, 1114
DpnI GATC 2 cut(s) 726, 864
DpnII GATC 2 cut(s) 724, 862
DraI TTTAAA 1 cut(s) 169
EaeI YGGCCR 2 cut(s) 46, 1408
Eam1104I CTCTTC 3 cut(s) 377, 1170, 1376
EarI CTCTTC 3 cut(s) 377, 1170, 1376
Eco130I CCWWGG 3 cut(s) 216, 1276, 1360
Eco147I AGGCCT 1 cut(s) 1359
Eco31I GGTCTC 1 cut(s) 941
Eco32I GATATC 1 cut(s) 64
Eco47I GGWCC 2 cut(s) 332, 1309
Eco81I CCTNAGG 1 cut(s) 755
EcoRI GAATTC 1 cut(s) 586
EcoRII CCWGG 1 cut(s) 1311
EcoRV GATATC 1 cut(s) 64
EcoT14I CCWWGG 3 cut(s) 216, 1276, 1360
EcoT22I ATGCAT 1 cut(s) 923
ErhI CCWWGG 3 cut(s) 216, 1276, 1360
FaeI CATG 9 cut(s) 213, 861, 921, 1101, 1168, 1246, 1271, 1280, 1375
FalI AAGNNNNNCTT 4 cut(s) 213, 245, 487, 519
FaqI GGGAC 1 cut(s) 376
FatI CATG 9 cut(s) 209, 857, 917, 1097, 1164, 1242, 1267, 1276, 1371
FbaI TGATCA 1 cut(s) 724
Fnu4HI GCNGC 3 cut(s) 5, 834, 1263
FokI GGATG 2 cut(s) 363, 702
Fsp4HI GCNGC 3 cut(s) 5, 834, 1263
FspBI CTAG 3 cut(s) 422, 507, 1104
GluI GCNGC 3 cut(s) 5, 834, 1263
GsaI CCCAGC 1 cut(s) 816
HaeIII GGCC 4 cut(s) 48, 1275, 1359, 1410
HgaI GACGC 2 cut(s) 280, 839
Hin1II CATG 9 cut(s) 213, 861, 921, 1101, 1168, 1246, 1271, 1280, 1375
HinfI GANTC 2 cut(s) 117, 712
HphI GGTGA 2 cut(s) 295, 801
Hpy188I TCNGA 3 cut(s) 489, 724, 970
Hpy188III TCNNGA 1 cut(s) 369
HpyAV CCTTC 2 cut(s) 305, 322
HpyCH4III ACNGT 4 cut(s) 88, 110, 736, 1124
HpyCH4V TGCA 7 cut(s) 4, 176, 897, 921, 975, 1139, 1154
HpyF10VI GCNNNNNNNGC 1 cut(s) 842
HpyF3I CTNAG 4 cut(s) 494, 755, 763, 1114
Hsp92II CATG 9 cut(s) 213, 861, 921, 1101, 1168, 1246, 1271, 1280, 1375
KpnI GGTACC 1 cut(s) 79
Ksp22I TGATCA 1 cut(s) 724
Kzo9I GATC 2 cut(s) 724, 862
LmnI GCTCC 2 cut(s) 218, 1072
Lsp1109I GCAGC 3 cut(s) 16, 820, 1274
LweI GCATC 1 cut(s) 1017
MaeI CTAG 3 cut(s) 422, 507, 1104
MaeIII GTNAC 1 cut(s) 387
MalI GATC 2 cut(s) 726, 864
MboI GATC 2 cut(s) 724, 862
MboII GAAGA 8 cut(s) 28, 394, 857, 1130, 1187, 1334, 1393, 1398
MfeI CAATTG 2 cut(s) 656, 1417
MhlI GDGCHC 2 cut(s) 99, 1069
MlsI TGGCCA 2 cut(s) 48, 1410
MluNI TGGCCA 2 cut(s) 48, 1410
MmeI TCCRAC 3 cut(s) 328, 488, 548
MnlI CCTC 6 cut(s) 315, 378, 750, 1053, 1154, 1349
Mox20I TGGCCA 2 cut(s) 48, 1410
Mph1103I ATGCAT 1 cut(s) 923
MroXI GAANNNNTTC 1 cut(s) 225
MscI TGGCCA 2 cut(s) 48, 1410
MseI TTAA 9 cut(s) 168, 179, 398, 456, 621, 1037, 1080, 1209, 1248
Msp20I TGGCCA 2 cut(s) 48, 1410
MspR9I CCNGG 1 cut(s) 1313
MunI CAATTG 2 cut(s) 656, 1417
Mva1269I GAATGC 1 cut(s) 921
MvaI CCWGG 1 cut(s) 1313
MwoI GCNNNNNNNGC 1 cut(s) 842
NcoI CCATGG 1 cut(s) 1276
NdeII GATC 2 cut(s) 724, 862
NlaIII CATG 9 cut(s) 213, 861, 921, 1101, 1168, 1246, 1271, 1280, 1375
NlaIV GGNNCC 3 cut(s) 77, 333, 1274
NsiI ATGCAT 1 cut(s) 923
NspI RCATGY 2 cut(s) 861, 1101
NspV TTCGAA 1 cut(s) 1255
PceI AGGCCT 1 cut(s) 1359
PciI ACATGT 1 cut(s) 857
PctI GAATGC 1 cut(s) 921
PdmI GAANNNNTTC 1 cut(s) 225
PfeI GAWTC 2 cut(s) 117, 712
PkrI GCNGC 3 cut(s) 6, 835, 1264
PscI ACATGT 1 cut(s) 857
Psp6I CCWGG 1 cut(s) 1311
PspFI CCCAGC 1 cut(s) 812
PspGI CCWGG 1 cut(s) 1311
PspN4I GGNNCC 3 cut(s) 77, 333, 1274
PspPI GGNCC 3 cut(s) 332, 1273, 1309
PstNI CAGNNNCTG 1 cut(s) 754
RsaI GTAC 2 cut(s) 77, 1132
RsaNI GTAC 2 cut(s) 76, 1131
SaqAI TTAA 9 cut(s) 168, 179, 398, 456, 621, 1037, 1080, 1209, 1248
SatI GCNGC 3 cut(s) 5, 834, 1263
Sau3AI GATC 2 cut(s) 724, 862
Sau96I GGNCC 3 cut(s) 332, 1273, 1309
ScrFI CCNGG 1 cut(s) 1313
SduI GDGCHC 2 cut(s) 99, 1069
SfaNI GCATC 1 cut(s) 1017
SfuI TTCGAA 1 cut(s) 1255
SinI GGWCC 2 cut(s) 332, 1309
SseBI AGGCCT 1 cut(s) 1359
SsiI CCGC 1 cut(s) 707
SspMI CTAG 3 cut(s) 422, 507, 1104
StuI AGGCCT 1 cut(s) 1359
StyD4I CCNGG 1 cut(s) 1311
StyI CCWWGG 3 cut(s) 216, 1276, 1360
TaaI ACNGT 4 cut(s) 88, 110, 736, 1124
TaqI TCGA 1 cut(s) 1255
TatI WGTACW 1 cut(s) 1130
TfiI GAWTC 2 cut(s) 117, 712
Tru1I TTAA 9 cut(s) 168, 179, 398, 456, 621, 1037, 1080, 1209, 1248
Tru9I TTAA 9 cut(s) 168, 179, 398, 456, 621, 1037, 1080, 1209, 1248
TscAI CASTG 3 cut(s) 91, 99, 913
TseI GCWGC 3 cut(s) 4, 833, 1262
TspDTI ATGAA 8 cut(s) 7, 109, 165, 507, 528, 704, 906, 1245
TspRI CASTG 3 cut(s) 91, 99, 913
VpaK11BI GGWCC 2 cut(s) 332, 1309
XapI RAATTY 6 cut(s) 409, 586, 617, 787, 824, 984
XceI RCATGY 2 cut(s) 861, 1101
XmnI GAANNNNTTC 1 cut(s) 225
XspI CTAG 3 cut(s) 422, 507, 1104
Zsp2I ATGCAT 1 cut(s) 923
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.