AT3G55870

Anthranilate synthase component I, N terminal region

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
20730842 .. 20733903
3062 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G55870.2

Sequence Viewer

Length: 1479 bp
ATGATCAAGAGGCTCCAAGTTTCCTTTTCGAATCTGTTGAGCCAGGACATCACTCTTCCACTGTTTGTCGTTGGAGCGCATCCGAAAATGGAAATTGTGGCAAAGGAGAATAAAGTTACAGTCATGGATCATGTGAAAGGCACTAAGACTACAGAGGAAGTTGAAGATCCAATGATGATTCCTAGAAGAATCTCAGAGACTTGGAAACCACAATTGATCGATGATCTTCCTGATGTTTTTTGTGGTGGATGGGTTGGTTACTTTTCTTATGATACTGTTCCCTATGCCGAAAAGCGAAAGCTACCTCTCTCAAAGGCTCCGGTTGATGACCGAAATTTACCAGATATGCATCTTGGTCTTTATGATGATGTGGTTGTGTTTGATCATGTCGAAAAGAAAATACATATAATTCATTGGGTGAGGTTATCAGAAAACTCATCATTTGATGATGTTTATGCTAATGCTGTGAAACACTTGGAAGAACTTGTTTCGAGGATCAAATGCATGAATCCCCCCAAGCTACCTTATGGATCAGTGGACTTGCACACAAATCAATTTGGCACTCCTTTGGAAAAATCAAGCATGACAAGTGATGCATATAAGAATGCTGTACTTCAAGCCAAAGAACACATACTGGCTGGAGATATCTTTCAGATTGTTTTAAGTCAAAGATTTGAGCGCCACACTTTTGCCCATCCGTTTGAAGTTTATCGAGCTTTGAGAATTGTGAACCCAAGTCCTTCTATGTGTTACTTGCAAGCAAGAGGTTGTATTCTAGTAGCGTCAAGTCCTGAGATTCTCACTAGAGTGAAGAAAAACAAGATCGTGAATAGACCACTAGCAGGAACTGCAAGACGAGGAAAGAGTTTCGAGGAGGATCAAATGTTGGAGGAGGCACTTTTAAAAGATGAAAAACAGTGTGCAGAACACATCATGCTCGTTGACTTGGGTCGCAATGATGTTGGAAAGGTGTCCAAGAACGGCTCAGTGAAAGTAGAAAGGCTCATGAATATAGAGCGTTATTCTCATGTCATGCATATTAGCTCAACGGTGATTGGAGAGTTGCAAGAGAATCTGACTTGCTGGGACACGCTTCGTGCTGCTTTACCCGTTGGAACCGTTAGCGGAGCTCCAAAGGTGAAGGCTATGGAGTTGATCGATGAGCTAGAGGTGACTAGAAGAGGTCCATATAGTGGTGGATTCGGTAGTGTCTCATTCACTGGAGACATGGACATAGCTTTGGCTCTTAGGACCATTGTGTTCCCAACACAAGCTCGTTACGACACAATGTACTCATACAAAGACAAAGACACGCCACGCCGTGAGTGGATAGCCTATCTACAAGCAGGTGCAGGCATTGTAGCTGATAGTGACCCAGAGGATGAGCACCGTGAGTGTCAGAACAAAGCTGCTGGGCTAGCACGTGCCATTGACTTGGCTGAGTCTGCATTCGTTGATAAAAGTGATACAACAATCTAG

Protein Analysis

492

Amino Acids

55.37

Weight (kDa)

6.05

Isoelectric Point (pI)

42.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Anth_synt_I_N PF04715 81 - 235 8.4e-29 Anthranilate synthase component I, N terminal region
Chorismate_bind PF00425 297 - 479 1e-54 chorismate binding enzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1337
Acc36I ACCTGC 1 cut(s) 1337
AccB7I CCANNNNNTGG 1 cut(s) 1193
AciI CCGC 1 cut(s) 1125
AclWI GGATC 5 cut(s) 135, 161, 503, 538, 885
AcsI RAATTY 1 cut(s) 334
AcvI CACGTG 1 cut(s) 1424
AdeI CACNNNGTG 1 cut(s) 1322
AfaI GTAC 2 cut(s) 612, 1292
AfiI CCNNNNNNNGG 2 cut(s) 842, 1193
AgsI TTSAA 3 cut(s) 164, 617, 704
AjnI CCWGG 1 cut(s) 42
AleI CACNNNNGTG 1 cut(s) 806
Alw21I GWGCWC 2 cut(s) 1132, 1389
Alw26I GTCTC 3 cut(s) 191, 1216, 1218
AlwI GGATC 5 cut(s) 135, 161, 503, 538, 885
AlwNI CAGNNNCTG 1 cut(s) 848
ApeKI GCWGC 2 cut(s) 1100, 1409
ApoI RAATTY 1 cut(s) 334
AspLEI GCGC 2 cut(s) 79, 681
AspS9I GGNCC 2 cut(s) 1184, 1251
AsuHPI GGTGA 4 cut(s) 430, 1063, 1150, 1183
AsuII TTCGAA 1 cut(s) 29
AsuNHI GCTAGC 1 cut(s) 1417
AvaII GGWCC 2 cut(s) 1184, 1251
BanII GRGCYC 1 cut(s) 1132
BbrPI CACGTG 1 cut(s) 1424
Bbv12I GWGCWC 2 cut(s) 1132, 1389
BbvI GCAGC 2 cut(s) 1087, 1396
BccI CCATC 2 cut(s) 243, 702
BceAI ACGGC 2 cut(s) 997, 1305
BciT130I CCWGG 1 cut(s) 44
BclI TGATCA 2 cut(s) 3, 382
BcoDI GTCTC 3 cut(s) 191, 1216, 1218
BfaI CTAG 8 cut(s) 183, 776, 804, 839, 1166, 1176, 1418, 1477
BfmI CTRYAG 1 cut(s) 150
BfoI RGCGCY 1 cut(s) 682
BfuAI ACCTGC 1 cut(s) 1337
BisI GCNGC 2 cut(s) 1101, 1410
BlsI GCNGC 2 cut(s) 1102, 1411
Bme1390I CCNGG 1 cut(s) 44
Bme18I GGWCC 2 cut(s) 1184, 1251
BmgT120I GGNCC 2 cut(s) 1184, 1251
BmiI GGNNCC 3 cut(s) 14, 318, 1117
BmrFI CCNGG 1 cut(s) 44
BmsI GCATC 3 cut(s) 88, 358, 583
BmtI GCTAGC 1 cut(s) 1421
BoxI GACNNNNGTC 1 cut(s) 948
BpmI CTGGAG 2 cut(s) 660, 1242
Bpu14I TTCGAA 1 cut(s) 29
Bsa29I ATCGAT 2 cut(s) 219, 1158
BsaAI YACGTR 1 cut(s) 1424
BsaBI GATNNNNATC 1 cut(s) 348
BsaWI WCCGGW 1 cut(s) 319
Bsc4I CCNNNNNNNGG 2 cut(s) 842, 1193
Bse1I ACTGG 2 cut(s) 639, 1225
Bse3DI GCAATG 1 cut(s) 961
Bse8I GATNNNNATC 1 cut(s) 348
BseBI CCWGG 1 cut(s) 44
BseCI ATCGAT 2 cut(s) 219, 1158
BseGI GGATG 4 cut(s) 79, 254, 694, 1387
BseJI GATNNNNATC 1 cut(s) 348
BseLI CCNNNNNNNGG 2 cut(s) 842, 1193
BseMI GCAATG 1 cut(s) 961
BseMII CTCAG 4 cut(s) 207, 783, 999, 1431
BseNI ACTGG 2 cut(s) 639, 1225
BseRI GAGGAG 2 cut(s) 887, 905
BseXI GCAGC 2 cut(s) 1087, 1396
BseYI CCCAGC 2 cut(s) 1083, 1412
BsgI GTGCAG 2 cut(s) 942, 1371
BshVI ATCGAT 2 cut(s) 219, 1158
BsiHKAI GWGCWC 2 cut(s) 1132, 1389
BsiSI CCGG 1 cut(s) 320
BslFI GGGAC 1 cut(s) 1100
BslI CCNNNNNNNGG 2 cut(s) 842, 1193
BsmAI GTCTC 3 cut(s) 191, 1216, 1218
BsmFI GGGAC 1 cut(s) 1100
BsmI GAATGC 2 cut(s) 610, 1448
Bsp119I TTCGAA 1 cut(s) 29
Bsp1286I GDGCHC 2 cut(s) 1132, 1389
BspACI CCGC 1 cut(s) 1125
BspCNI CTCAG 4 cut(s) 206, 784, 998, 1432
BspDI ATCGAT 2 cut(s) 219, 1158
BspHI TCATGA 1 cut(s) 1005
BspLI GGNNCC 3 cut(s) 14, 318, 1117
BspMI ACCTGC 1 cut(s) 1337
BspOI GCTAGC 1 cut(s) 1421
BspPI GGATC 5 cut(s) 135, 161, 503, 538, 885
BspT104I TTCGAA 1 cut(s) 29
BsrDI GCAATG 1 cut(s) 961
BsrI ACTGG 2 cut(s) 639, 1225
Bst2UI CCWGG 1 cut(s) 44
Bst4CI ACNGT 7 cut(s) 63, 121, 277, 918, 1051, 1120, 1391
Bst6I CTCTTC 2 cut(s) 60, 1174
BstAPI GCANNNNNTGC 1 cut(s) 848
BstBAI YACGTR 1 cut(s) 1424
BstBI TTCGAA 1 cut(s) 29
BstC8I GCNNGC 3 cut(s) 759, 1354, 1419
BstDEI CTNAG 6 cut(s) 144, 193, 792, 985, 1247, 1440
BstF5I GGATG 4 cut(s) 79, 254, 694, 1387
BstH2I RGCGCY 1 cut(s) 682
BstHHI GCGC 2 cut(s) 79, 681
BstMAI GTCTC 3 cut(s) 191, 1216, 1218
BstMWI GCNNNNNNNGC 3 cut(s) 848, 1418, 1445
BstNI CCWGG 1 cut(s) 44
BstPAI GACNNNNGTC 1 cut(s) 948
BstSCI CCNGG 1 cut(s) 42
BstSFI CTRYAG 1 cut(s) 150
BstV1I GCAGC 2 cut(s) 1087, 1396
BstX2I RGATCY 1 cut(s) 166
BstXI CCANNNNNNTGG 1 cut(s) 1435
BstYI RGATCY 1 cut(s) 166
Bsu15I ATCGAT 2 cut(s) 219, 1158
BsuTUI ATCGAT 2 cut(s) 219, 1158
BtsCI GGATG 4 cut(s) 79, 254, 694, 1387
BtsIMutI CAGTG 5 cut(s) 59, 540, 923, 993, 1218
BveI ACCTGC 1 cut(s) 1337
Cac8I GCNNGC 3 cut(s) 759, 1354, 1419
CaiI CAGNNNCTG 1 cut(s) 848
CciI TCATGA 1 cut(s) 1005
CfoI GCGC 2 cut(s) 79, 681
Cfr13I GGNCC 2 cut(s) 1184, 1251
ClaI ATCGAT 2 cut(s) 219, 1158
CseI GACGC 1 cut(s) 771
Csp6I GTAC 2 cut(s) 611, 1291
CviQI GTAC 2 cut(s) 611, 1291
DdeI CTNAG 6 cut(s) 144, 193, 792, 985, 1247, 1440
DraI TTTAAA 1 cut(s) 903
DraIII CACNNNGTG 1 cut(s) 1322
Eam1104I CTCTTC 2 cut(s) 60, 1174
EarI CTCTTC 2 cut(s) 60, 1174
Ecl136II GAGCTC 1 cut(s) 1130
Eco24I GRGCYC 1 cut(s) 1132
Eco32I GATATC 1 cut(s) 646
Eco47I GGWCC 2 cut(s) 1184, 1251
Eco53kI GAGCTC 1 cut(s) 1130
Eco72I CACGTG 1 cut(s) 1424
EcoICRI GAGCTC 1 cut(s) 1130
EcoRII CCWGG 1 cut(s) 42
EcoRV GATATC 1 cut(s) 646
EcoT22I ATGCAT 4 cut(s) 351, 506, 598, 1038
EcoT38I GRGCYC 1 cut(s) 1132
FaqI GGGAC 1 cut(s) 1100
FbaI TGATCA 2 cut(s) 3, 382
Fnu4HI GCNGC 2 cut(s) 1101, 1410
FokI GGATG 4 cut(s) 66, 261, 681, 1394
FriOI GRGCYC 1 cut(s) 1132
Fsp4HI GCNGC 2 cut(s) 1101, 1410
FspBI CTAG 8 cut(s) 183, 776, 804, 839, 1166, 1176, 1418, 1477
GlaI GCGC 2 cut(s) 78, 680
GluI GCNGC 2 cut(s) 1101, 1410
GsaI CCCAGC 2 cut(s) 1087, 1416
GsuI CTGGAG 2 cut(s) 660, 1242
HaeII RGCGCY 1 cut(s) 682
HapII CCGG 1 cut(s) 320
HgaI GACGC 1 cut(s) 771
HhaI GCGC 2 cut(s) 79, 681
Hin6I GCGC 2 cut(s) 77, 679
HinP1I GCGC 2 cut(s) 77, 679
HincII GTYRAC 1 cut(s) 943
HindII GTYRAC 1 cut(s) 943
HinfI GANTC 8 cut(s) 31, 178, 189, 508, 796, 1072, 1200, 1442
HpaII CCGG 1 cut(s) 320
HphI GGTGA 4 cut(s) 430, 1063, 1150, 1183
Hpy166II GTNNAC 3 cut(s) 538, 730, 943
Hpy188I TCNGA 6 cut(s) 84, 196, 430, 654, 1077, 1401
Hpy188III TCNNGA 5 cut(s) 7, 230, 791, 826, 1006
Hpy8I GTNNAC 3 cut(s) 538, 730, 943
HpyAV CCTTC 2 cut(s) 750, 1135
HpyCH4III ACNGT 7 cut(s) 63, 121, 277, 918, 1051, 1120, 1391
HpyCH4IV ACGT 1 cut(s) 1423
HpyF10VI GCNNNNNNNGC 3 cut(s) 848, 1418, 1445
HpyF3I CTNAG 6 cut(s) 144, 193, 792, 985, 1247, 1440
HpySE526I ACGT 1 cut(s) 1423
HspAI GCGC 2 cut(s) 77, 679
Ksp22I TGATCA 2 cut(s) 3, 382
LmnI GCTCC 5 cut(s) 18, 74, 322, 1127, 1135
Lsp1109I GCAGC 2 cut(s) 1087, 1396
LweI GCATC 3 cut(s) 88, 358, 583
MaeI CTAG 8 cut(s) 183, 776, 804, 839, 1166, 1176, 1418, 1477
MaeII ACGT 1 cut(s) 1423
MaeIII GTNAC 6 cut(s) 115, 257, 749, 1171, 1277, 1370
MboII GAAGA 7 cut(s) 47, 176, 198, 218, 491, 823, 1191
MfeI CAATTG 1 cut(s) 212
MflI RGATCY 1 cut(s) 166
MhlI GDGCHC 2 cut(s) 1132, 1389
MluCI AATT 6 cut(s) 93, 212, 334, 408, 554, 723
MlyI GAGTC 1 cut(s) 1451
MmeI TCCRAC 4 cut(s) 52, 867, 943, 1093
Mph1103I ATGCAT 4 cut(s) 351, 506, 598, 1038
MseI TTAA 2 cut(s) 662, 902
MslI CAYNNNNRTG 1 cut(s) 806
MspI CCGG 1 cut(s) 320
MspR9I CCNGG 1 cut(s) 44
MunI CAATTG 1 cut(s) 212
Mva1269I GAATGC 2 cut(s) 610, 1448
MvaI CCWGG 1 cut(s) 44
MwoI GCNNNNNNNGC 3 cut(s) 848, 1418, 1445
NheI GCTAGC 1 cut(s) 1417
NlaIV GGNNCC 3 cut(s) 14, 318, 1117
NmuCI GTSAC 2 cut(s) 1171, 1370
NsiI ATGCAT 4 cut(s) 351, 506, 598, 1038
NspV TTCGAA 1 cut(s) 29
OliI CACNNNNGTG 1 cut(s) 806
PagI TCATGA 1 cut(s) 1005
PaqCI CACCTGC 1 cut(s) 1337
PctI GAATGC 2 cut(s) 610, 1448
PfeI GAWTC 7 cut(s) 31, 178, 189, 508, 796, 1072, 1200
PflMI CCANNNNNTGG 1 cut(s) 1193
PkrI GCNGC 2 cut(s) 1102, 1411
PleI GAGTC 1 cut(s) 1450
PmaCI CACGTG 1 cut(s) 1424
PmlI CACGTG 1 cut(s) 1424
PpsI GAGTC 1 cut(s) 1450
Ppu21I YACGTR 1 cut(s) 1424
PshAI GACNNNNGTC 1 cut(s) 948
Psp124BI GAGCTC 1 cut(s) 1132
Psp6I CCWGG 1 cut(s) 42
PspCI CACGTG 1 cut(s) 1424
PspFI CCCAGC 2 cut(s) 1083, 1412
PspGI CCWGG 1 cut(s) 42
PspN4I GGNNCC 3 cut(s) 14, 318, 1117
PspPI GGNCC 2 cut(s) 1184, 1251
PstNI CAGNNNCTG 1 cut(s) 848
PsuI RGATCY 1 cut(s) 166
RsaI GTAC 2 cut(s) 612, 1292
RsaNI GTAC 2 cut(s) 611, 1291
RseI CAYNNNNRTG 1 cut(s) 806
SacI GAGCTC 1 cut(s) 1132
SaqAI TTAA 2 cut(s) 662, 902
SatI GCNGC 2 cut(s) 1101, 1410
Sau96I GGNCC 2 cut(s) 1184, 1251
SchI GAGTC 1 cut(s) 1451
ScrFI CCNGG 1 cut(s) 44
SduI GDGCHC 2 cut(s) 1132, 1389
SfaNI GCATC 3 cut(s) 88, 358, 583
SfcI CTRYAG 1 cut(s) 150
SfuI TTCGAA 1 cut(s) 29
SinI GGWCC 2 cut(s) 1184, 1251
SmiMI CAYNNNNRTG 1 cut(s) 806
Sse9I AATT 6 cut(s) 93, 212, 334, 408, 554, 723
SsiI CCGC 1 cut(s) 1125
SspMI CTAG 8 cut(s) 183, 776, 804, 839, 1166, 1176, 1418, 1477
SstI GAGCTC 1 cut(s) 1132
StyD4I CCNGG 1 cut(s) 42
TaaI ACNGT 7 cut(s) 63, 121, 277, 918, 1051, 1120, 1391
TaiI ACGT 1 cut(s) 1426
TaqI TCGA 7 cut(s) 29, 219, 390, 491, 712, 870, 1158
TaqII GACCGA 1 cut(s) 345
TasI AATT 6 cut(s) 93, 212, 334, 408, 554, 723
TatI WGTACW 2 cut(s) 610, 1290
TfiI GAWTC 7 cut(s) 31, 178, 189, 508, 796, 1072, 1200
Tru1I TTAA 2 cut(s) 662, 902
Tru9I TTAA 2 cut(s) 662, 902
TscAI CASTG 5 cut(s) 66, 540, 923, 993, 1225
TseFI GTSAC 2 cut(s) 1171, 1370
TseI GCWGC 2 cut(s) 1100, 1409
Tsp45I GTSAC 2 cut(s) 1171, 1370
TspDTI ATGAA 4 cut(s) 401, 521, 924, 1022
TspGWI ACGGA 1 cut(s) 687
TspRI CASTG 5 cut(s) 66, 540, 923, 993, 1225
Van91I CCANNNNNTGG 1 cut(s) 1193
VpaK11BI GGWCC 2 cut(s) 1184, 1251
XapI RAATTY 1 cut(s) 334
XcmI CCANNNNNNNNNTGG 1 cut(s) 1323
XspI CTAG 8 cut(s) 183, 776, 804, 839, 1166, 1176, 1418, 1477
Zsp2I ATGCAT 4 cut(s) 351, 506, 598, 1038
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.