Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00712

Orthogroup ID

OG0006462

Physical Location & Seq

Genomic Coordinates Reverse (-)

39537 .. 43898

Gene Structure 4362 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G015500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGAAAGAAAGTTCGATGAATTTGGTTGTAGCAATTTCATTTTTATTTTTTGCTCCGTTTTTGGGGAAACATTTTTTATTTTTTTTCTGTTTCTGTTATGTTTTGTTTCATTTTTCAGCAACTGACGCAAAGAAGTTTGAGGAAGTGTCAAAAAATGGAAATTTGGTTCCCCTTTACAAGTGCATTTTTTCGGACCAGCTCACGCCGGTTCTTGCATATCGATGCTTGGTGAAGGAAGATGACAGAGAGGCTCCGAGTTTTCTGTTTGAGTCGGTTGATCAGAGCACCCAGGGGCGATATAGTGTTCTTGGAGCTCAACCAGCAATGGAGATTGTGGCGAAAGAAAATAAGGTGACTATAATGGATCATGAAGGAAGGTGTTCAGTAGAGGAGTTTGTTGAGGATCCAATGGATATTCCGAAAAGAATCTCACAGGGTTGGCGTCCCCAACTTATTCATGAACTTCCAGATGCATTTTGTGGTGGTTGGGTAGGCTTCTTTTCATATGATACAGTTCGTTATGTGGAAAAGAGAAGACTGCCATTCTCAAAGGCACCCAAGGATGACAGAAATCTTCCAGACATGCATTTAGGACTCTATGATGATGTTATAGTGTTTGACCATGTGGAGAAGAAAATTTATGTGATTCACTGGGTGAGGTTAGACCGGTACTCCTCAGTTGAGAAAGCCTATACAGATGGAGCAAAACGGTTGGTTGAATTAGTGGCTCGAGTACATAACATTGACTTACCAAGGCTGTCTTCCGGTGCTGTGAGCCTGCATACTCACCATTTTGGTCCTCCTTTAAAGAATTCAAACATGACCAGTGAGGCATACAAGGACATAGTTAAGAAGGCAAAGGAGCATATACTCTCAGGGGATATTTTCCAAATCGTATTAAGTCAGCGATTTGAACGCCGAACATTTGCTGACCCATCTGAAGTCTATAGAGCCCTGAGGACTGTAAATCCGAGTCCATATATGACTTACTTGCAGGCTAGAGGGTGTATACTGGTTGCTTCAAGTCCAGAAATTCTTATGAGTGCAAAGAAGAAAAAAATTGTGAATCGGCCATTAGCTGGAACTTCTAGAAGAGGGAAGACAATTGAAGAGGATAAAATGTTAGAAGTGCAGCTACTTCATGATGAAAAGCAATGTGCAGAACACATCATGCTGGTTGATTTGGGTCGGAATGATGTTGGAAAGGTCTCCAAATTTGGTTCTGTAAACGTGGAAAGACTAATGAACGTTGAACGATATTCCCATGTCATGCACATAAGCTCTACGGTCACCGGCGAGCTGCAAGACGGTCTCACTTGCTGGGACGCTCTGCGAGCTGCATTGCCTGTTGGAATGTCAGTGAAGGCCATGGAGTTAATCGATCAGTTGGAGGTAAACAGGCGTGGCCCATACAGCGGCGGATTTGGAGCAGTATCGTTTTCCGGTGATATGGACATTGCACTAGCTCTGAGGACCATGGTGTTTCCAACAGCAGCCCGTTTTGACACAATGTACTCTTACAAAAATGGCAACACCCGTCGGGAGTGGGTTGCATATCTTCAAGCTGGTGCTGGTATAGTTGCTGACAGTGATCCTGATGATGAAAACCAAGAGTGCCAGAACAAAGCTGCAGGTCTTGCTCGTGCCATCGACTTGGCTGAGGCCGCATTTGTTCATGAATGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000162 GO:0003674 GO:0003824 GO:0004049 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005950 GO:0006082 GO:0006520 GO:0006568 GO:0006576 GO:0006586 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009308 GO:0009309 GO:0009889 GO:0009987 GO:0010600 GO:0010817 GO:0016053 GO:0016829 GO:0016830 GO:0016833 GO:0018130 GO:0019222 GO:0019438 GO:0019752 GO:0031323 GO:0031326 GO:0032350 GO:0032991 GO:0034641 GO:0042401 GO:0042430 GO:0042435 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046219 GO:0046394 GO:0046483 GO:0046885 GO:0050789 GO:0050794 GO:0065007 GO:0065008 GO:0071704 GO:0090354 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1902494

KEGG Pathways

Metabolic & Signaling

ko00400 ko00405 ko01100 ko01110 ko01130 ko01230 ko02024 ko02025 map00400 map00405 map01100 map01110 map01130 map01230 map02024 map02025

Pfam Domains

Protein Families

Anth_synt_I_N Chorismate_bind

Protein Analysis

561

Amino Acids

63.42

Weight (kDa)

6.4

Isoelectric Point (pI)

44.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Anth_synt_I_N	PF04715	65 - 215	4.4e-30	Anthranilate synthase component I, N terminal region
Chorismate_bind	PF00425	276 - 542	1.2e-70	chorismate binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006462)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55870 AT3G55870 AT3G55870 AT5G05730 AT5G05730
fragaria_vesca	FvH4_3g39390 FvH4_7g24230 FvH4_7g24230
malus_domestica	MD01G1149800.v1.1 MD07G1216200.v1.1
prunus_persica	Prupe.2G248100_v2.0.a1
pyrus_communis	pycom07g19850 pycom07g19860
rosa_chinensis	RchiOBHm_Chr1g0369821
rosa_laevigata	RLG00000027103
rosa_multiflora	Rmu_sc0007743.1_g000006 Rmu_sc0008140.1_g000006 Rmu_sc0039066.1_g000001
rosa_roxburghii	Rroxscaffold_4G00287360
rosa_rugosa	Rorug01G0352500
rosa_samantha	Rh1AG361000 Rh1BG324700 Rh1CG337900 Rh1DG355100
rosa_wichuraiana	Rw0G015500 Rw1G031780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1622
AccB1I	GGYRCC	1 cut(s)	553
AccB7I	CCANNNNNTGG	1 cut(s)	1079
AccI	GTMKAC	1 cut(s)	1009
AciI	CCGC	3 cut(s)	1416, 1419, 1665
AclI	AACGTT	1 cut(s)	1248
AclWI	GGATC	4 cut(s)	372, 398, 411, 1586
AcoI	YGGCCR	1 cut(s)	1070
AcsI	RAATTY	6 cut(s)	19, 160, 636, 811, 1032, 1214
AcuI	CTGAAG	1 cut(s)	960
AcyI	GRCGYC	1 cut(s)	442
AdeI	CACNNNGTG	1 cut(s)	655
AfaI	GTAC	3 cut(s)	671, 735, 1514
AfiI	CCNNNNNNNGG	3 cut(s)	62, 1079, 1415
AgeI	ACCGGT	1 cut(s)	666
AgsI	TTSAA	7 cut(s)	719, 816, 914, 1023, 1109, 1253, 1562
AjnI	CCWGG	1 cut(s)	288
AjuI	GAANNNNNNNTTGG	2 cut(s)	745, 777
AloI	GAACNNNNNNTCC	2 cut(s)	150, 182
Alw21I	GWGCWC	2 cut(s)	287, 316
Alw26I	GTCTC	2 cut(s)	1213, 1316
AlwI	GGATC	4 cut(s)	372, 398, 411, 1586
AlwNI	CAGNNNCTG	1 cut(s)	122
Ama87I	CYCGRG	1 cut(s)	729
AoxI	GGCC	4 cut(s)	1070, 1365, 1405, 1662
ApeKI	GCWGC	5 cut(s)	1132, 1300, 1337, 1493, 1628
ApoI	RAATTY	6 cut(s)	19, 160, 636, 811, 1032, 1214
AsiGI	ACCGGT	1 cut(s)	666
Asp700I	GAANNNNTTC	1 cut(s)	379
AspS9I	GGNCC	4 cut(s)	193, 797, 1406, 1473
AsuHPI	GGTGA	6 cut(s)	241, 364, 667, 779, 1282, 1457
AvaI	CYCGRG	1 cut(s)	729
AvaII	GGWCC	3 cut(s)	193, 797, 1473
AxyI	CCTNAGG	1 cut(s)	956
BamHI	GGATCC	1 cut(s)	403
BanI	GGYRCC	1 cut(s)	553
BanII	GRGCYC	2 cut(s)	316, 955
BarI	GAAGNNNNNNTAC	2 cut(s)	1119, 1151
BauI	CACGAG	1 cut(s)	1641
BbsI	GAAGAC	3 cut(s)	541, 753, 1106
Bbv12I	GWGCWC	2 cut(s)	287, 316
BbvCI	CCTCAGC	1 cut(s)	1659
BbvI	GCAGC	5 cut(s)	1144, 1287, 1324, 1505, 1615
BccI	CCATC	3 cut(s)	692, 943, 1655
BciT130I	CCWGG	1 cut(s)	290
BclI	TGATCA	1 cut(s)	277
BcoDI	GTCTC	2 cut(s)	1213, 1316
BfaI	CTAG	3 cut(s)	999, 1089, 1463
BfmI	CTRYAG	2 cut(s)	946, 1629
BfuAI	ACCTGC	1 cut(s)	1622
BisI	GCNGC	7 cut(s)	1133, 1301, 1338, 1417, 1494, 1629, 1665
BlsI	GCNGC	7 cut(s)	1134, 1302, 1339, 1418, 1495, 1630, 1666
Bme1390I	CCNGG	1 cut(s)	290
Bme18I	GGWCC	3 cut(s)	193, 797, 1473
BmeT110I	CYCGRG	1 cut(s)	729
BmgT120I	GGNCC	4 cut(s)	193, 797, 1406, 1473
BmiI	GGNNCC	4 cut(s)	168, 252, 405, 555
BmrFI	CCNGG	1 cut(s)	290
BmrI	ACTGGG	1 cut(s)	661
BmsI	GCATC	2 cut(s)	212, 460
BmuI	ACTGGG	1 cut(s)	661
BpiI	GAAGAC	3 cut(s)	541, 753, 1106
Bpu10I	CCTNAGC	1 cut(s)	1659
Bsa29I	ATCGAT	2 cut(s)	220, 1380
BsaHI	GRCGYC	1 cut(s)	442
BsaI	GGTCTC	2 cut(s)	1213, 1316
BsaJI	CCNNGG	6 cut(s)	288, 289, 558, 752, 1368, 1476
BsaWI	WCCGGW	3 cut(s)	666, 764, 1442
BsaXI	ACNNNNNCTCC	2 cut(s)	656, 686
Bsc4I	CCNNNNNNNGG	3 cut(s)	62, 1079, 1415
Bse118I	RCCGGY	3 cut(s)	205, 666, 1292
Bse1I	ACTGG	3 cut(s)	656, 825, 1017
Bse21I	CCTNAGG	1 cut(s)	956
Bse3DI	GCAATG	4 cut(s)	330, 1160, 1340, 1455
BseBI	CCWGG	1 cut(s)	290
BseCI	ATCGAT	2 cut(s)	220, 1380
BseDI	CCNNGG	6 cut(s)	288, 289, 558, 752, 1368, 1476
BseGI	GGATG	1 cut(s)	568
BseLI	CCNNNNNNNGG	3 cut(s)	62, 1079, 1415
BseMI	GCAATG	4 cut(s)	330, 1160, 1340, 1455
BseMII	CTCAG	5 cut(s)	690, 888, 947, 1460, 1650
BseNI	ACTGG	3 cut(s)	656, 825, 1017
BseRI	GAGGAG	2 cut(s)	404, 664
BseXI	GCAGC	5 cut(s)	1144, 1287, 1324, 1505, 1615
BseYI	CCCAGC	1 cut(s)	1320
BsgI	GTGCAG	2 cut(s)	1151, 1179
BshFI	GGCC	4 cut(s)	1072, 1367, 1407, 1664
BshNI	GGYRCC	1 cut(s)	553
BshTI	ACCGGT	1 cut(s)	666
BshVI	ATCGAT	2 cut(s)	220, 1380
BsiHKAI	GWGCWC	2 cut(s)	287, 316
BsiHKCI	CYCGRG	1 cut(s)	729
BsiSI	CCGG	5 cut(s)	206, 667, 765, 1293, 1443
BslFI	GGGAC	2 cut(s)	429, 1337
BslI	CCNNNNNNNGG	3 cut(s)	62, 1079, 1415
BsmAI	GTCTC	2 cut(s)	1213, 1316
BsmFI	GGGAC	2 cut(s)	429, 1337
BsmI	GAATGC	1 cut(s)	1685
BsnI	GGCC	4 cut(s)	1072, 1367, 1407, 1664
Bso31I	GGTCTC	2 cut(s)	1213, 1316
BsoBI	CYCGRG	1 cut(s)	729
Bsp1286I	GDGCHC	3 cut(s)	287, 316, 955
Bsp143I	GATC	5 cut(s)	277, 364, 403, 1381, 1591
Bsp19I	CCATGG	2 cut(s)	1368, 1476
BspACI	CCGC	3 cut(s)	1416, 1419, 1665
BspANI	GGCC	4 cut(s)	1072, 1367, 1407, 1664
BspCNI	CTCAG	5 cut(s)	689, 887, 948, 1461, 1651
BspDI	ATCGAT	2 cut(s)	220, 1380
BspHI	TCATGA	4 cut(s)	367, 457, 1141, 1675
BspLI	GGNNCC	4 cut(s)	168, 252, 405, 555
BspMAI	CTGCAG	1 cut(s)	1633
BspMI	ACCTGC	1 cut(s)	1622
BspPI	GGATC	4 cut(s)	372, 398, 411, 1586
BspT107I	GGYRCC	1 cut(s)	553
BspTNI	GGTCTC	2 cut(s)	1213, 1316
BsrDI	GCAATG	4 cut(s)	330, 1160, 1340, 1455
BsrFI	RCCGGY	3 cut(s)	205, 666, 1292
BsrI	ACTGG	3 cut(s)	656, 825, 1017
BssAI	RCCGGY	3 cut(s)	205, 666, 1292
BssECI	CCNNGG	6 cut(s)	288, 289, 558, 752, 1368, 1476
BssMI	GATC	5 cut(s)	277, 364, 403, 1381, 1591
BssNAI	GTATAC	1 cut(s)	1010
BssNI	GRCGYC	1 cut(s)	442
BssSI	CACGAG	1 cut(s)	1641
BssT1I	CCWWGG	4 cut(s)	558, 752, 1368, 1476
Bst1107I	GTATAC	1 cut(s)	1010
Bst2BI	CACGAG	1 cut(s)	1641
Bst2UI	CCWGG	1 cut(s)	290
Bst4CI	ACNGT	6 cut(s)	514, 711, 964, 1288, 1310, 1589
Bst6I	CTCTTC	2 cut(s)	1087, 1104
BstACI	GRCGYC	1 cut(s)	442
BstAPI	GCANNNNNTGC	1 cut(s)	1637
BstC8I	GCNNGC	4 cut(s)	779, 996, 1298, 1335
BstDEI	CTNAG	5 cut(s)	676, 874, 956, 1469, 1659
BstDSI	CCRYGG	2 cut(s)	1368, 1476
BstEII	GGTNACC	1 cut(s)	1288
BstF5I	GGATG	1 cut(s)	568
BstKTI	GATC	5 cut(s)	280, 367, 406, 1384, 1594
BstMAI	GTCTC	2 cut(s)	1213, 1316
BstMBI	GATC	5 cut(s)	277, 364, 403, 1381, 1591
BstMWI	GCNNNNNNNGC	6 cut(s)	125, 320, 1334, 1413, 1637, 1664
BstNI	CCWGG	1 cut(s)	290
BstNSI	RCATGY	1 cut(s)	586
BstPI	GGTNACC	1 cut(s)	1288
BstSCI	CCNGG	1 cut(s)	288
BstSFI	CTRYAG	2 cut(s)	946, 1629
BstV1I	GCAGC	5 cut(s)	1144, 1287, 1324, 1505, 1615
BstV2I	GAAGAC	3 cut(s)	541, 753, 1106
BstX2I	RGATCY	1 cut(s)	403
BstXI	CCANNNNNNTGG	1 cut(s)	1654
BstYI	RGATCY	1 cut(s)	403
BstZ17I	GTATAC	1 cut(s)	1010
Bsu15I	ATCGAT	2 cut(s)	220, 1380
Bsu36I	CCTNAGG	1 cut(s)	956
BsuRI	GGCC	4 cut(s)	1072, 1367, 1407, 1664
BsuTUI	ATCGAT	2 cut(s)	220, 1380
BtgI	CCRYGG	2 cut(s)	1368, 1476
BtsCI	GGATG	1 cut(s)	568
BtsIMutI	CAGTG	4 cut(s)	649, 832, 1365, 1594
BveI	ACCTGC	1 cut(s)	1622
Cac8I	GCNNGC	4 cut(s)	779, 996, 1298, 1335
CaiI	CAGNNNCTG	1 cut(s)	122
CciI	TCATGA	4 cut(s)	367, 457, 1141, 1675
Cfr10I	RCCGGY	3 cut(s)	205, 666, 1292
Cfr13I	GGNCC	4 cut(s)	193, 797, 1406, 1473
ClaI	ATCGAT	2 cut(s)	220, 1380
CseI	GACGC	3 cut(s)	134, 431, 1334
Csp6I	GTAC	3 cut(s)	670, 734, 1513
CspAI	ACCGGT	1 cut(s)	666
CviQI	GTAC	3 cut(s)	670, 734, 1513
DdeI	CTNAG	5 cut(s)	676, 874, 956, 1469, 1659
DpnI	GATC	5 cut(s)	279, 366, 405, 1383, 1593
DpnII	GATC	5 cut(s)	277, 364, 403, 1381, 1591
DraI	TTTAAA	1 cut(s)	807
DraIII	CACNNNGTG	1 cut(s)	655
EaeI	YGGCCR	1 cut(s)	1070
Eam1104I	CTCTTC	2 cut(s)	1087, 1104
EarI	CTCTTC	2 cut(s)	1087, 1104
EciI	GGCGGA	1 cut(s)	1434
Ecl136II	GAGCTC	1 cut(s)	314
Eco130I	CCWWGG	4 cut(s)	558, 752, 1368, 1476
Eco24I	GRGCYC	2 cut(s)	316, 955
Eco31I	GGTCTC	2 cut(s)	1213, 1316
Eco47I	GGWCC	3 cut(s)	193, 797, 1473
Eco53kI	GAGCTC	1 cut(s)	314
Eco57I	CTGAAG	1 cut(s)	960
Eco81I	CCTNAGG	1 cut(s)	956
Eco88I	CYCGRG	1 cut(s)	729
Eco91I	GGTNACC	1 cut(s)	1288
EcoICRI	GAGCTC	1 cut(s)	314
EcoO65I	GGTNACC	1 cut(s)	1288
EcoRI	GAATTC	1 cut(s)	811
EcoRII	CCWGG	1 cut(s)	288
EcoT14I	CCWWGG	4 cut(s)	558, 752, 1368, 1476
EcoT22I	ATGCAT	2 cut(s)	475, 588
EcoT38I	GRGCYC	2 cut(s)	316, 955
ErhI	CCWWGG	4 cut(s)	558, 752, 1368, 1476
FalI	AAGNNNNNCTT	2 cut(s)	745, 777
FaqI	GGGAC	2 cut(s)	429, 1337
FauNDI	CATATG	1 cut(s)	505
FbaI	TGATCA	1 cut(s)	277
FblI	GTMKAC	1 cut(s)	1009
Fnu4HI	GCNGC	7 cut(s)	1133, 1301, 1338, 1417, 1494, 1629, 1665
FokI	GGATG	1 cut(s)	575
FriOI	GRGCYC	2 cut(s)	316, 955
Fsp4HI	GCNGC	7 cut(s)	1133, 1301, 1338, 1417, 1494, 1629, 1665
FspBI	CTAG	3 cut(s)	999, 1089, 1463
GluI	GCNGC	7 cut(s)	1133, 1301, 1338, 1417, 1494, 1629, 1665
GsaI	CCCAGC	1 cut(s)	1324
HaeIII	GGCC	4 cut(s)	1072, 1367, 1407, 1664
HapII	CCGG	5 cut(s)	206, 667, 765, 1293, 1443
HgaI	GACGC	3 cut(s)	134, 431, 1334
Hin1I	GRCGYC	1 cut(s)	442
HinfI	GANTC	6 cut(s)	269, 426, 594, 646, 973, 1066
HpaII	CCGG	5 cut(s)	206, 667, 765, 1293, 1443
HphI	GGTGA	6 cut(s)	241, 364, 667, 779, 1282, 1457
Hpy166II	GTNNAC	3 cut(s)	1010, 1228, 1396
Hpy188I	TCNGA	8 cut(s)	193, 255, 282, 420, 940, 972, 1191, 1470
Hpy8I	GTNNAC	3 cut(s)	1010, 1228, 1396
Hpy99I	CGWCG	1 cut(s)	1542
HpyAV	CCTTC	5 cut(s)	226, 365, 369, 847, 1357
HpyCH4III	ACNGT	6 cut(s)	514, 711, 964, 1288, 1310, 1589
HpyCH4IV	ACGT	2 cut(s)	1230, 1248
HpyF10VI	GCNNNNNNNGC	6 cut(s)	125, 320, 1334, 1413, 1637, 1664
HpyF3I	CTNAG	5 cut(s)	676, 874, 956, 1469, 1659
HpySE526I	ACGT	2 cut(s)	1230, 1248
Hsp92I	GRCGYC	1 cut(s)	442
Ksp22I	TGATCA	1 cut(s)	277
Kzo9I	GATC	5 cut(s)	277, 364, 403, 1381, 1591
LmnI	GCTCC	6 cut(s)	58, 256, 311, 701, 862, 1427
Lsp1109I	GCAGC	5 cut(s)	1144, 1287, 1324, 1505, 1615
LweI	GCATC	2 cut(s)	212, 460
MaeI	CTAG	3 cut(s)	999, 1089, 1463
MaeII	ACGT	2 cut(s)	1230, 1248
MaeIII	GTNAC	2 cut(s)	352, 1288
MalI	GATC	5 cut(s)	279, 366, 405, 1383, 1593
MboI	GATC	5 cut(s)	277, 364, 403, 1381, 1591
MfeI	CAATTG	1 cut(s)	1104
MflI	RGATCY	1 cut(s)	403
MhlI	GDGCHC	3 cut(s)	287, 316, 955
MlyI	GAGTC	3 cut(s)	278, 588, 982
MmeI	TCCRAC	5 cut(s)	1169, 1180, 1330, 1368, 1511
Mph1103I	ATGCAT	2 cut(s)	475, 588
MroXI	GAANNNNTTC	1 cut(s)	379
MseI	TTAA	4 cut(s)	806, 849, 899, 1376
MslI	CAYNNNNRTG	1 cut(s)	220
MspA1I	CMGCKG	1 cut(s)	1416
MspI	CCGG	5 cut(s)	206, 667, 765, 1293, 1443
MspR9I	CCNGG	1 cut(s)	290
MunI	CAATTG	1 cut(s)	1104
Mva1269I	GAATGC	1 cut(s)	1685
MvaI	CCWGG	1 cut(s)	290
MwoI	GCNNNNNNNGC	6 cut(s)	125, 320, 1334, 1413, 1637, 1664
NcoI	CCATGG	2 cut(s)	1368, 1476
NdeI	CATATG	1 cut(s)	505
NdeII	GATC	5 cut(s)	277, 364, 403, 1381, 1591
NlaIV	GGNNCC	4 cut(s)	168, 252, 405, 555
NmuCI	GTSAC	2 cut(s)	352, 1288
NsiI	ATGCAT	2 cut(s)	475, 588
NspI	RCATGY	1 cut(s)	586
PaeR7I	CTCGAG	1 cut(s)	729
PagI	TCATGA	4 cut(s)	367, 457, 1141, 1675
PasI	CCCWGGG	1 cut(s)	289
PctI	GAATGC	1 cut(s)	1685
PdmI	GAANNNNTTC	1 cut(s)	379
PfeI	GAWTC	3 cut(s)	426, 646, 1066
PflMI	CCANNNNNTGG	1 cut(s)	1079
PinAI	ACCGGT	1 cut(s)	666
PkrI	GCNGC	7 cut(s)	1134, 1302, 1339, 1418, 1495, 1630, 1666
PleI	GAGTC	3 cut(s)	277, 588, 981
PpsI	GAGTC	3 cut(s)	277, 588, 981
Psp124BI	GAGCTC	1 cut(s)	316
Psp1406I	AACGTT	1 cut(s)	1248
Psp6I	CCWGG	1 cut(s)	288
PspEI	GGTNACC	1 cut(s)	1288
PspFI	CCCAGC	1 cut(s)	1320
PspGI	CCWGG	1 cut(s)	288
PspN4I	GGNNCC	4 cut(s)	168, 252, 405, 555
PspPI	GGNCC	4 cut(s)	193, 797, 1406, 1473
PspXI	VCTCGAGB	1 cut(s)	729
PstI	CTGCAG	1 cut(s)	1633
PstNI	CAGNNNCTG	1 cut(s)	122
PsuI	RGATCY	1 cut(s)	403
RsaI	GTAC	3 cut(s)	671, 735, 1514
RsaNI	GTAC	3 cut(s)	670, 734, 1513
RseI	CAYNNNNRTG	1 cut(s)	220
SacI	GAGCTC	1 cut(s)	316
SaqAI	TTAA	4 cut(s)	806, 849, 899, 1376
SatI	GCNGC	7 cut(s)	1133, 1301, 1338, 1417, 1494, 1629, 1665
Sau3AI	GATC	5 cut(s)	277, 364, 403, 1381, 1591
Sau96I	GGNCC	4 cut(s)	193, 797, 1406, 1473
SchI	GAGTC	3 cut(s)	278, 588, 982
ScrFI	CCNGG	1 cut(s)	290
SduI	GDGCHC	3 cut(s)	287, 316, 955
SfaNI	GCATC	2 cut(s)	212, 460
SfcI	CTRYAG	2 cut(s)	946, 1629
Sfr274I	CTCGAG	1 cut(s)	729
SgrAI	CRCCGGYG	1 cut(s)	1292
SinI	GGWCC	3 cut(s)	193, 797, 1473
SlaI	CTCGAG	1 cut(s)	729
SmiMI	CAYNNNNRTG	1 cut(s)	220
SmlI	CTYRAG	1 cut(s)	729
SmoI	CTYRAG	1 cut(s)	729
SsiI	CCGC	3 cut(s)	1416, 1419, 1665
SspMI	CTAG	3 cut(s)	999, 1089, 1463
SstI	GAGCTC	1 cut(s)	316
StyD4I	CCNGG	1 cut(s)	288
StyI	CCWWGG	4 cut(s)	558, 752, 1368, 1476
TaaI	ACNGT	6 cut(s)	514, 711, 964, 1288, 1310, 1589
TaiI	ACGT	2 cut(s)	1233, 1251
TaqI	TCGA	5 cut(s)	14, 220, 730, 1380, 1650
TatI	WGTACW	2 cut(s)	733, 1512
TauI	GCSGC	2 cut(s)	1419, 1667
TfiI	GAWTC	3 cut(s)	426, 646, 1066
Tru1I	TTAA	4 cut(s)	806, 849, 899, 1376
Tru9I	TTAA	4 cut(s)	806, 849, 899, 1376
TscAI	CASTG	4 cut(s)	656, 832, 1365, 1594
TseFI	GTSAC	2 cut(s)	352, 1288
TseI	GCWGC	5 cut(s)	1132, 1300, 1337, 1493, 1628
Tsp45I	GTSAC	2 cut(s)	352, 1288
TspGWI	ACGGA	1 cut(s)	45
TspRI	CASTG	4 cut(s)	656, 832, 1365, 1594
Van91I	CCANNNNNTGG	1 cut(s)	1079
VpaK11BI	GGWCC	3 cut(s)	193, 797, 1473
XapI	RAATTY	6 cut(s)	19, 160, 636, 811, 1032, 1214
XbaI	TCTAGA	1 cut(s)	1088
XceI	RCATGY	1 cut(s)	586
XhoI	CTCGAG	1 cut(s)	729
XmiI	GTMKAC	1 cut(s)	1009
XmnI	GAANNNNTTC	1 cut(s)	379
XspI	CTAG	3 cut(s)	999, 1089, 1463
Zsp2I	ATGCAT	2 cut(s)	475, 588

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.