Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0006462

Physical Location & Seq

Genomic Coordinates Reverse (-)

8403664 .. 8408912

Gene Structure 5249 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00287360.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1626 bp

ATGCGGGCATTTCTCACGCCACTGTCCAAAACTCTATTATCACAGAAATCAAGAAAACTCACATTTCCCAGGACCTCTTCAGCTTCCGTTACCGGCCATTTTCCGTTTCACTTGACCGACATGCAAGCTCTCTGCATCTCCCACCGCTTGGTTCCGCCGGCGACTCACCGGCTCTCTCCGGTTCCGCTCACGCCGGTTCTTGCATATCGATGCTTGGTGAAGGAGGATGATAGAGAGGCTCCGAGTTTTCTGTTTGAGTCGGTTGATCAGAGCACCCAGGGGAGATATAGTGTTGTTGGAGCTCAACCAGCTATGGAGATTGTGGCGAAAGAAAATAAGGTGACGATAATGGATCATGAAGGAGCGTGTTCAGTAGAGGAGTTTGTTGAGGATCCAATGGATATTCCGAAAAGAATCTCACAGGGTTGGAGTCCCCAACTTATTCATGAACTTCCAGATGCATTTTGTGGTGGTTGGGTAGGCTTCTTTTCATATGATACAGTTCGTTATGTGGAAAAGAGAAGACTGCCATTCTCAAAGGCACCCAAGGATGACAGAAATCTTCCAGACATGCATTTAGGACTCTATGATGATGTTATAGTGTTCGACCACGTGGAGAAGAAAATTTATGCGATTCACTGGGTGAGGTTAGACCGGTACTCCTCAGTTGAGAAAGCCTATACAGATGGAGCAAAACGGTTGGATGAATTAGTGGCTCGAGTACATAACATTGACTTACCAAGGCTGTCTTCCGGTGCTGTGAGCCTGCATACTCACCATTTTGGTCCTCCTTTAAAGAATTCAAACATGACCAGTGAGGCATACAAGGACATAGTTAAGAAGGCAAAGGAGCATATACTCTCAGGGGATATTTTCCAAATCGTATTAAGTCAGCGATTTGAACGTCGAACATTTGCTGACCCATTTGAAGTCTATAGAGCCCTGAGGACTGTAAATCCGAGTCCATATTTGACTTACTTGCAGGCTAGAGGGTGTATACTGGTTGCTTCAAGTCCAGAAATTCTTATGAGTGCAAAGAAGAAAAAGATTGTGAATCGGCCATTAGCTGGAACTTCTAGAAGAGGGAAGACAATTGAAGAGGATAAAATGTTAGAAGTGCAGCTACTTCATGATGAAAAGCAATGTGCAGAACACATCATGCTGGTTGATTTGGGTCGGAATGATGTTGGAAAGGTCACCGGCGAGCTGCAAGACGGTCTCACTTGCTGGGACGCTCTGCGAGCTGCATTGCCTGTTGGAACTGTCAGTGGTGCACCAAAGGTGAAGGCCATGGAGTTAATCGATCAGTTGGAGGTAAACAGGCGTGGCCCATACAGCGGCGGATTTGGAGCAGTATCGTTTTCCGGTGATATGGACATTGCACTAGCTCTGAGGACCATGGTGTTTCCAACAGCAGCCCGTTTTGACACAATGTACTCTTACAAAAATGGCAACACCCACCGGGAGTGGGTTGCATATCTTCAAGCTGGTGCTGGTATAGTTGCTGACAGTGATCCTGATGATGAAAACCAAGAGTGCCAGAACAAAGCTGCTGGTCTTGCTCGTGCCATCGACTTGGCTGAGGCGGCATTTGTTTGGCTGAGGCGGCATTTGGGTGGTGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000162 GO:0003674 GO:0003824 GO:0004049 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005950 GO:0006082 GO:0006520 GO:0006568 GO:0006576 GO:0006586 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009308 GO:0009309 GO:0009889 GO:0009987 GO:0010600 GO:0010817 GO:0016053 GO:0016829 GO:0016830 GO:0016833 GO:0018130 GO:0019222 GO:0019438 GO:0019752 GO:0031323 GO:0031326 GO:0032350 GO:0032991 GO:0034641 GO:0042401 GO:0042430 GO:0042435 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046219 GO:0046394 GO:0046483 GO:0046885 GO:0050789 GO:0050794 GO:0065007 GO:0065008 GO:0071704 GO:0090354 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1902494

KEGG Pathways

Metabolic & Signaling

ko00400 ko00405 ko01100 ko01110 ko01130 ko01230 ko02024 ko02025 map00400 map00405 map01100 map01110 map01130 map01230 map02024 map02025

Pfam Domains

Protein Families

Anth_synt_I_N Chorismate_bind

Protein Analysis

541

Amino Acids

60.56

Weight (kDa)

7.02

Isoelectric Point (pI)

45.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Anth_synt_I_N	PF04715	63 - 210	5.6e-29	Anthranilate synthase component I, N terminal region
Chorismate_bind	PF00425	272 - 399	1e-33	chorismate binding enzyme
Chorismate_bind	PF00425	398 - 516	4.6e-27	chorismate binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006462)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55870 AT3G55870 AT3G55870 AT5G05730 AT5G05730
fragaria_vesca	FvH4_3g39390 FvH4_7g24230 FvH4_7g24230
malus_domestica	MD01G1149800.v1.1 MD07G1216200.v1.1
prunus_persica	Prupe.2G248100_v2.0.a1
pyrus_communis	pycom07g19850 pycom07g19860
rosa_chinensis	RchiOBHm_Chr1g0369821
rosa_laevigata	RLG00000027103
rosa_multiflora	Rmu_sc0007743.1_g000006 Rmu_sc0008140.1_g000006 Rmu_sc0039066.1_g000001
rosa_roxburghii	Rroxscaffold_4G00287360
rosa_rugosa	Rorug01G0352500
rosa_samantha	Rh1AG361000 Rh1BG324700 Rh1CG337900 Rh1DG355100
rosa_wichuraiana	Rw0G015500 Rw1G031780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	541
AccB7I	CCANNNNNTGG	2 cut(s)	148, 1067
AccBSI	CCGCTC	1 cut(s)	187
AccI	GTMKAC	1 cut(s)	997
AciI	CCGC	8 cut(s)	4, 145, 155, 185, 1338, 1341, 1586, 1606
AclWI	GGATC	4 cut(s)	360, 386, 399, 1508
AcoI	YGGCCR	2 cut(s)	94, 1058
AcsI	RAATTY	3 cut(s)	624, 799, 1020
AcuI	CTGAAG	1 cut(s)	63
AcvI	CACGTG	1 cut(s)	613
AdeI	CACNNNGTG	1 cut(s)	643
AfaI	GTAC	3 cut(s)	659, 723, 1436
AfiI	CCNNNNNNNGG	4 cut(s)	148, 1067, 1337, 1468
AgeI	ACCGGT	1 cut(s)	654
AgsI	TTSAA	6 cut(s)	804, 902, 929, 1011, 1097, 1484
AjnI	CCWGG	2 cut(s)	68, 276
AjuI	GAANNNNNNNTTGG	2 cut(s)	733, 765
Alw21I	GWGCWC	3 cut(s)	275, 304, 1276
Alw26I	GTCTC	1 cut(s)	1223
Alw44I	GTGCAC	1 cut(s)	1272
AlwI	GGATC	4 cut(s)	360, 386, 399, 1508
Ama87I	CYCGRG	1 cut(s)	717
AoxI	GGCC	4 cut(s)	94, 1058, 1287, 1327
ApaLI	GTGCAC	1 cut(s)	1272
ApeKI	GCWGC	5 cut(s)	1120, 1207, 1244, 1415, 1550
ApoI	RAATTY	3 cut(s)	624, 799, 1020
AsiGI	ACCGGT	1 cut(s)	654
AspS9I	GGNCC	4 cut(s)	72, 785, 1328, 1395
AsuC2I	CCSGG	1 cut(s)	1463
AsuHPI	GGTGA	8 cut(s)	158, 229, 352, 655, 767, 1189, 1294, 1379
AvaI	CYCGRG	1 cut(s)	717
AvaII	GGWCC	3 cut(s)	72, 785, 1395
AxyI	CCTNAGG	1 cut(s)	944
BaeGI	GKGCMC	1 cut(s)	1276
BamHI	GGATCC	1 cut(s)	391
BanI	GGYRCC	1 cut(s)	541
BanII	GRGCYC	2 cut(s)	304, 943
BarI	GAAGNNNNNNTAC	2 cut(s)	1107, 1139
BauI	CACGAG	1 cut(s)	1563
BbrPI	CACGTG	1 cut(s)	613
BbsI	GAAGAC	3 cut(s)	529, 741, 1094
Bbv12I	GWGCWC	3 cut(s)	275, 304, 1276
BbvCI	CCTCAGC	2 cut(s)	1581, 1601
BbvI	GCAGC	5 cut(s)	1132, 1194, 1231, 1427, 1537
BccI	CCATC	2 cut(s)	680, 1577
BciT130I	CCWGG	2 cut(s)	70, 278
BclI	TGATCA	1 cut(s)	265
BcnI	CCSGG	1 cut(s)	1463
BcoDI	GTCTC	1 cut(s)	1223
BfaI	CTAG	3 cut(s)	987, 1077, 1385
BfmI	CTRYAG	1 cut(s)	934
BisI	GCNGC	8 cut(s)	1121, 1208, 1245, 1339, 1416, 1551, 1587, 1607
BlsI	GCNGC	8 cut(s)	1122, 1209, 1246, 1340, 1417, 1552, 1588, 1608
Bme1390I	CCNGG	3 cut(s)	70, 278, 1463
Bme18I	GGWCC	3 cut(s)	72, 785, 1395
BmeT110I	CYCGRG	1 cut(s)	717
BmgT120I	GGNCC	4 cut(s)	72, 785, 1328, 1395
BmiI	GGNNCC	5 cut(s)	153, 183, 240, 393, 543
BmrFI	CCNGG	3 cut(s)	70, 278, 1463
BmrI	ACTGGG	1 cut(s)	649
BmsI	GCATC	3 cut(s)	144, 200, 448
BmuI	ACTGGG	1 cut(s)	649
BpiI	GAAGAC	3 cut(s)	529, 741, 1094
Bpu10I	CCTNAGC	2 cut(s)	1581, 1601
BpuMI	CCSGG	1 cut(s)	1463
Bsa29I	ATCGAT	2 cut(s)	208, 1302
BsaAI	YACGTR	1 cut(s)	613
BsaI	GGTCTC	1 cut(s)	1223
BsaJI	CCNNGG	7 cut(s)	68, 276, 277, 546, 740, 1290, 1398
BsaWI	WCCGGW	4 cut(s)	178, 654, 752, 1364
BsaXI	ACNNNNNCTCC	4 cut(s)	274, 304, 644, 674
Bsc4I	CCNNNNNNNGG	4 cut(s)	148, 1067, 1337, 1468
Bse118I	RCCGGY	6 cut(s)	92, 157, 168, 193, 654, 1199
Bse1I	ACTGG	3 cut(s)	644, 813, 1005
Bse21I	CCTNAGG	1 cut(s)	944
Bse3DI	GCAATG	3 cut(s)	1148, 1247, 1377
BseBI	CCWGG	2 cut(s)	70, 278
BseCI	ATCGAT	2 cut(s)	208, 1302
BseDI	CCNNGG	7 cut(s)	68, 276, 277, 546, 740, 1290, 1398
BseGI	GGATG	3 cut(s)	232, 556, 709
BseLI	CCNNNNNNNGG	4 cut(s)	148, 1067, 1337, 1468
BseMI	GCAATG	3 cut(s)	1148, 1247, 1377
BseMII	CTCAG	6 cut(s)	678, 876, 935, 1382, 1572, 1592
BseNI	ACTGG	3 cut(s)	644, 813, 1005
BseRI	GAGGAG	2 cut(s)	392, 652
BseSI	GKGCMC	1 cut(s)	1276
BseXI	GCAGC	5 cut(s)	1132, 1194, 1231, 1427, 1537
BseYI	CCCAGC	1 cut(s)	1227
BsgI	GTGCAG	2 cut(s)	1139, 1167
BshFI	GGCC	4 cut(s)	96, 1060, 1289, 1329
BshNI	GGYRCC	1 cut(s)	541
BshTI	ACCGGT	1 cut(s)	654
BshVI	ATCGAT	2 cut(s)	208, 1302
BsiHKAI	GWGCWC	3 cut(s)	275, 304, 1276
BsiHKCI	CYCGRG	1 cut(s)	717
BslFI	GGGAC	2 cut(s)	417, 1244
BslI	CCNNNNNNNGG	4 cut(s)	148, 1067, 1337, 1468
BsmAI	GTCTC	1 cut(s)	1223
BsmFI	GGGAC	2 cut(s)	417, 1244
BsnI	GGCC	4 cut(s)	96, 1060, 1289, 1329
Bso31I	GGTCTC	1 cut(s)	1223
BsoBI	CYCGRG	1 cut(s)	717
Bsp1286I	GDGCHC	4 cut(s)	275, 304, 943, 1276
Bsp143I	GATC	5 cut(s)	265, 352, 391, 1303, 1513
Bsp19I	CCATGG	2 cut(s)	1290, 1398
BspACI	CCGC	8 cut(s)	4, 145, 155, 185, 1338, 1341, 1586, 1606
BspANI	GGCC	4 cut(s)	96, 1060, 1289, 1329
BspCNI	CTCAG	6 cut(s)	677, 875, 936, 1383, 1573, 1593
BspDI	ATCGAT	2 cut(s)	208, 1302
BspHI	TCATGA	3 cut(s)	355, 445, 1129
BspLI	GGNNCC	5 cut(s)	153, 183, 240, 393, 543
BspPI	GGATC	4 cut(s)	360, 386, 399, 1508
BspT107I	GGYRCC	1 cut(s)	541
BspTNI	GGTCTC	1 cut(s)	1223
BsrBI	CCGCTC	1 cut(s)	187
BsrDI	GCAATG	3 cut(s)	1148, 1247, 1377
BsrFI	RCCGGY	6 cut(s)	92, 157, 168, 193, 654, 1199
BsrI	ACTGG	3 cut(s)	644, 813, 1005
BssAI	RCCGGY	6 cut(s)	92, 157, 168, 193, 654, 1199
BssECI	CCNNGG	7 cut(s)	68, 276, 277, 546, 740, 1290, 1398
BssMI	GATC	5 cut(s)	265, 352, 391, 1303, 1513
BssNAI	GTATAC	1 cut(s)	998
BssSI	CACGAG	1 cut(s)	1563
BssT1I	CCWWGG	4 cut(s)	546, 740, 1290, 1398
Bst1107I	GTATAC	1 cut(s)	998
Bst2BI	CACGAG	1 cut(s)	1563
Bst2UI	CCWGG	2 cut(s)	70, 278
Bst4CI	ACNGT	7 cut(s)	24, 502, 699, 952, 1217, 1264, 1511
Bst6I	CTCTTC	3 cut(s)	82, 1075, 1092
BstBAI	YACGTR	1 cut(s)	613
BstC8I	GCNNGC	7 cut(s)	6, 126, 159, 767, 984, 1205, 1242
BstDEI	CTNAG	6 cut(s)	664, 862, 944, 1391, 1581, 1601
BstDSI	CCRYGG	2 cut(s)	1290, 1398
BstEII	GGTNACC	1 cut(s)	1195
BstF5I	GGATG	3 cut(s)	232, 556, 709
BstKTI	GATC	5 cut(s)	268, 355, 394, 1306, 1516
BstMAI	GTCTC	1 cut(s)	1223
BstMBI	GATC	5 cut(s)	265, 352, 391, 1303, 1513
BstMWI	GCNNNNNNNGC	6 cut(s)	308, 1241, 1335, 1559, 1586, 1606
BstNI	CCWGG	2 cut(s)	70, 278
BstNSI	RCATGY	2 cut(s)	124, 574
BstPI	GGTNACC	1 cut(s)	1195
BstSCI	CCNGG	3 cut(s)	68, 276, 1461
BstSFI	CTRYAG	1 cut(s)	934
BstSLI	GKGCMC	1 cut(s)	1276
BstV1I	GCAGC	5 cut(s)	1132, 1194, 1231, 1427, 1537
BstV2I	GAAGAC	3 cut(s)	529, 741, 1094
BstX2I	RGATCY	1 cut(s)	391
BstXI	CCANNNNNNTGG	1 cut(s)	1576
BstYI	RGATCY	1 cut(s)	391
BstZ17I	GTATAC	1 cut(s)	998
Bsu15I	ATCGAT	2 cut(s)	208, 1302
Bsu36I	CCTNAGG	1 cut(s)	944
BsuRI	GGCC	4 cut(s)	96, 1060, 1289, 1329
BsuTUI	ATCGAT	2 cut(s)	208, 1302
BtgI	CCRYGG	2 cut(s)	1290, 1398
BtsCI	GGATG	3 cut(s)	232, 556, 709
BtsIMutI	CAGTG	5 cut(s)	20, 637, 820, 1273, 1516
Cac8I	GCNNGC	7 cut(s)	6, 126, 159, 767, 984, 1205, 1242
CciI	TCATGA	3 cut(s)	355, 445, 1129
Cfr10I	RCCGGY	6 cut(s)	92, 157, 168, 193, 654, 1199
Cfr13I	GGNCC	4 cut(s)	72, 785, 1328, 1395
ClaI	ATCGAT	2 cut(s)	208, 1302
CseI	GACGC	1 cut(s)	1241
Csp6I	GTAC	3 cut(s)	658, 722, 1435
CspAI	ACCGGT	1 cut(s)	654
CviAII	CATG	9 cut(s)	121, 356, 446, 571, 808, 1130, 1159, 1291, 1399
CviQI	GTAC	3 cut(s)	658, 722, 1435
DdeI	CTNAG	6 cut(s)	664, 862, 944, 1391, 1581, 1601
DpnI	GATC	5 cut(s)	267, 354, 393, 1305, 1515
DpnII	GATC	5 cut(s)	265, 352, 391, 1303, 1513
DraI	TTTAAA	1 cut(s)	795
DraIII	CACNNNGTG	1 cut(s)	643
EaeI	YGGCCR	2 cut(s)	94, 1058
Eam1104I	CTCTTC	3 cut(s)	82, 1075, 1092
EarI	CTCTTC	3 cut(s)	82, 1075, 1092
EciI	GGCGGA	2 cut(s)	144, 1356
Ecl136II	GAGCTC	1 cut(s)	302
Eco130I	CCWWGG	4 cut(s)	546, 740, 1290, 1398
Eco24I	GRGCYC	2 cut(s)	304, 943
Eco31I	GGTCTC	1 cut(s)	1223
Eco47I	GGWCC	3 cut(s)	72, 785, 1395
Eco53kI	GAGCTC	1 cut(s)	302
Eco57I	CTGAAG	1 cut(s)	63
Eco72I	CACGTG	1 cut(s)	613
Eco81I	CCTNAGG	1 cut(s)	944
Eco88I	CYCGRG	1 cut(s)	717
Eco91I	GGTNACC	1 cut(s)	1195
EcoICRI	GAGCTC	1 cut(s)	302
EcoO109I	RGGNCCY	1 cut(s)	72
EcoO65I	GGTNACC	1 cut(s)	1195
EcoRI	GAATTC	1 cut(s)	799
EcoRII	CCWGG	2 cut(s)	68, 276
EcoT14I	CCWWGG	4 cut(s)	546, 740, 1290, 1398
EcoT22I	ATGCAT	2 cut(s)	463, 576
EcoT38I	GRGCYC	2 cut(s)	304, 943
ErhI	CCWWGG	4 cut(s)	546, 740, 1290, 1398
FaeI	CATG	9 cut(s)	124, 359, 449, 574, 811, 1133, 1162, 1294, 1402
FalI	AAGNNNNNCTT	2 cut(s)	733, 765
FaqI	GGGAC	2 cut(s)	417, 1244
FatI	CATG	9 cut(s)	120, 355, 445, 570, 807, 1129, 1158, 1290, 1398
FauNDI	CATATG	1 cut(s)	493
FbaI	TGATCA	1 cut(s)	265
FblI	GTMKAC	1 cut(s)	997
Fnu4HI	GCNGC	8 cut(s)	1121, 1208, 1245, 1339, 1416, 1551, 1587, 1607
FokI	GGATG	3 cut(s)	239, 563, 716
FriOI	GRGCYC	2 cut(s)	304, 943
Fsp4HI	GCNGC	8 cut(s)	1121, 1208, 1245, 1339, 1416, 1551, 1587, 1607
FspBI	CTAG	3 cut(s)	987, 1077, 1385
GluI	GCNGC	8 cut(s)	1121, 1208, 1245, 1339, 1416, 1551, 1587, 1607
GsaI	CCCAGC	1 cut(s)	1231
HaeIII	GGCC	4 cut(s)	96, 1060, 1289, 1329
HgaI	GACGC	1 cut(s)	1241
Hin1II	CATG	9 cut(s)	124, 359, 449, 574, 811, 1133, 1162, 1294, 1402
HinfI	GANTC	8 cut(s)	163, 257, 414, 430, 582, 634, 961, 1054
HphI	GGTGA	8 cut(s)	158, 229, 352, 655, 767, 1189, 1294, 1379
Hpy166II	GTNNAC	3 cut(s)	998, 1274, 1318
Hpy188I	TCNGA	6 cut(s)	243, 270, 408, 960, 1179, 1392
Hpy188III	TCNNGA	9 cut(s)	51, 356, 446, 455, 566, 1016, 1077, 1130, 1517
Hpy8I	GTNNAC	3 cut(s)	998, 1274, 1318
Hpy99I	CGWCG	1 cut(s)	909
HpyAV	CCTTC	4 cut(s)	214, 353, 835, 1279
HpyCH4III	ACNGT	7 cut(s)	24, 502, 699, 952, 1217, 1264, 1511
HpyCH4IV	ACGT	2 cut(s)	612, 904
HpyF10VI	GCNNNNNNNGC	6 cut(s)	308, 1241, 1335, 1559, 1586, 1606
HpyF3I	CTNAG	6 cut(s)	664, 862, 944, 1391, 1581, 1601
HpySE526I	ACGT	2 cut(s)	612, 904
Hsp92II	CATG	9 cut(s)	124, 359, 449, 574, 811, 1133, 1162, 1294, 1402
KroI	GCCGGC	1 cut(s)	157
KroNI	GCCGGC	1 cut(s)	159
Ksp22I	TGATCA	1 cut(s)	265
Kzo9I	GATC	5 cut(s)	265, 352, 391, 1303, 1513
LmnI	GCTCC	6 cut(s)	244, 299, 362, 689, 850, 1349
Lsp1109I	GCAGC	5 cut(s)	1132, 1194, 1231, 1427, 1537
LweI	GCATC	3 cut(s)	144, 200, 448
MaeI	CTAG	3 cut(s)	987, 1077, 1385
MaeII	ACGT	2 cut(s)	612, 904
MaeIII	GTNAC	3 cut(s)	88, 340, 1195
MalI	GATC	5 cut(s)	267, 354, 393, 1305, 1515
MbiI	CCGCTC	1 cut(s)	187
MboI	GATC	5 cut(s)	265, 352, 391, 1303, 1513
MfeI	CAATTG	1 cut(s)	1092
MflI	RGATCY	1 cut(s)	391
MhlI	GDGCHC	4 cut(s)	275, 304, 943, 1276
MluCI	AATT	5 cut(s)	624, 707, 799, 1020, 1092
MlyI	GAGTC	5 cut(s)	157, 266, 439, 576, 970
MmeI	TCCRAC	8 cut(s)	277, 407, 681, 1157, 1168, 1237, 1290, 1433
Mph1103I	ATGCAT	2 cut(s)	463, 576
MreI	CGCCGGCG	1 cut(s)	157
MroNI	GCCGGC	1 cut(s)	157
MseI	TTAA	4 cut(s)	794, 837, 887, 1298
MslI	CAYNNNNRTG	2 cut(s)	208, 1614
MspA1I	CMGCKG	1 cut(s)	1338
MspR9I	CCNGG	3 cut(s)	70, 278, 1463
MunI	CAATTG	1 cut(s)	1092
MvaI	CCWGG	2 cut(s)	70, 278
MwoI	GCNNNNNNNGC	6 cut(s)	308, 1241, 1335, 1559, 1586, 1606
NaeI	GCCGGC	1 cut(s)	159
NciI	CCSGG	1 cut(s)	1463
NcoI	CCATGG	2 cut(s)	1290, 1398
NdeI	CATATG	1 cut(s)	493
NdeII	GATC	5 cut(s)	265, 352, 391, 1303, 1513
NgoMIV	GCCGGC	1 cut(s)	157
NlaIII	CATG	9 cut(s)	124, 359, 449, 574, 811, 1133, 1162, 1294, 1402
NlaIV	GGNNCC	5 cut(s)	153, 183, 240, 393, 543
NmuCI	GTSAC	2 cut(s)	340, 1195
NsiI	ATGCAT	2 cut(s)	463, 576
NspI	RCATGY	2 cut(s)	124, 574
PaeR7I	CTCGAG	1 cut(s)	717
PagI	TCATGA	3 cut(s)	355, 445, 1129
PasI	CCCWGGG	1 cut(s)	277
PdiI	GCCGGC	1 cut(s)	159
PfeI	GAWTC	3 cut(s)	414, 634, 1054
PflMI	CCANNNNNTGG	2 cut(s)	148, 1067
PinAI	ACCGGT	1 cut(s)	654
PkrI	GCNGC	8 cut(s)	1122, 1209, 1246, 1340, 1417, 1552, 1588, 1608
PleI	GAGTC	5 cut(s)	157, 265, 438, 576, 969
PmaCI	CACGTG	1 cut(s)	613
PmlI	CACGTG	1 cut(s)	613
PpsI	GAGTC	5 cut(s)	157, 265, 438, 576, 969
Ppu21I	YACGTR	1 cut(s)	613
PpuMI	RGGWCCY	1 cut(s)	72
Psp124BI	GAGCTC	1 cut(s)	304
Psp5II	RGGWCCY	1 cut(s)	72
Psp6I	CCWGG	2 cut(s)	68, 276
PspCI	CACGTG	1 cut(s)	613
PspEI	GGTNACC	1 cut(s)	1195
PspFI	CCCAGC	1 cut(s)	1227
PspGI	CCWGG	2 cut(s)	68, 276
PspN4I	GGNNCC	5 cut(s)	153, 183, 240, 393, 543
PspPI	GGNCC	4 cut(s)	72, 785, 1328, 1395
PspPPI	RGGWCCY	1 cut(s)	72
PspXI	VCTCGAGB	1 cut(s)	717
PsuI	RGATCY	1 cut(s)	391
RsaI	GTAC	3 cut(s)	659, 723, 1436
RsaNI	GTAC	3 cut(s)	658, 722, 1435
RseI	CAYNNNNRTG	2 cut(s)	208, 1614
SacI	GAGCTC	1 cut(s)	304
SaqAI	TTAA	4 cut(s)	794, 837, 887, 1298
SatI	GCNGC	8 cut(s)	1121, 1208, 1245, 1339, 1416, 1551, 1587, 1607
Sau3AI	GATC	5 cut(s)	265, 352, 391, 1303, 1513
Sau96I	GGNCC	4 cut(s)	72, 785, 1328, 1395
SchI	GAGTC	5 cut(s)	157, 266, 439, 576, 970
ScrFI	CCNGG	3 cut(s)	70, 278, 1463
SduI	GDGCHC	4 cut(s)	275, 304, 943, 1276
SfaNI	GCATC	3 cut(s)	144, 200, 448
SfcI	CTRYAG	1 cut(s)	934
Sfr274I	CTCGAG	1 cut(s)	717
SgrAI	CRCCGGYG	2 cut(s)	157, 1199
SinI	GGWCC	3 cut(s)	72, 785, 1395
SlaI	CTCGAG	1 cut(s)	717
SmiMI	CAYNNNNRTG	2 cut(s)	208, 1614
SmlI	CTYRAG	1 cut(s)	717
SmoI	CTYRAG	1 cut(s)	717
Sse9I	AATT	5 cut(s)	624, 707, 799, 1020, 1092
SsiI	CCGC	8 cut(s)	4, 145, 155, 185, 1338, 1341, 1586, 1606
SspMI	CTAG	3 cut(s)	987, 1077, 1385
SstI	GAGCTC	1 cut(s)	304
StyD4I	CCNGG	3 cut(s)	68, 276, 1461
StyI	CCWWGG	4 cut(s)	546, 740, 1290, 1398
TaaI	ACNGT	7 cut(s)	24, 502, 699, 952, 1217, 1264, 1511
TaiI	ACGT	2 cut(s)	615, 907
TaqI	TCGA	6 cut(s)	208, 606, 718, 907, 1302, 1572
TaqII	GACCGA	1 cut(s)	131
TasI	AATT	5 cut(s)	624, 707, 799, 1020, 1092
TatI	WGTACW	2 cut(s)	721, 1434
TauI	GCSGC	3 cut(s)	1341, 1589, 1609
TfiI	GAWTC	3 cut(s)	414, 634, 1054
Tru1I	TTAA	4 cut(s)	794, 837, 887, 1298
Tru9I	TTAA	4 cut(s)	794, 837, 887, 1298
TscAI	CASTG	5 cut(s)	27, 644, 820, 1273, 1516
TseFI	GTSAC	2 cut(s)	340, 1195
TseI	GCWGC	5 cut(s)	1120, 1207, 1244, 1415, 1550
Tsp45I	GTSAC	2 cut(s)	340, 1195
TspDTI	ATGAA	8 cut(s)	372, 434, 462, 480, 720, 1118, 1149, 1539
TspGWI	ACGGA	2 cut(s)	76, 93
TspRI	CASTG	5 cut(s)	27, 644, 820, 1273, 1516
Van91I	CCANNNNNTGG	2 cut(s)	148, 1067
VneI	GTGCAC	1 cut(s)	1272
VpaK11BI	GGWCC	3 cut(s)	72, 785, 1395
XapI	RAATTY	3 cut(s)	624, 799, 1020
XbaI	TCTAGA	1 cut(s)	1076
XceI	RCATGY	2 cut(s)	124, 574
XhoI	CTCGAG	1 cut(s)	717
XmiI	GTMKAC	1 cut(s)	997
XspI	CTAG	3 cut(s)	987, 1077, 1385
Zsp2I	ATGCAT	2 cut(s)	463, 576

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.