Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008140.1

Orthogroup ID

OG0006462

Physical Location & Seq

Genomic Coordinates Forward (+)

9307 .. 15962

Gene Structure 6656 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008140.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1953 bp

atgtccagcagtggcgttgtcctcaactggctttggattttctgtgatcgagtcaaggtcatggtatcgtgtacagctgtagtggtggggatgtgcatcgagcggttggtcgaggttgagctggatctgcggcttctgggtggcggaggtgtgcttggctgcagaggggaggtgaattcgtgtgcagactatgcactagatgggtcggtcgccagagatggcggcaacgacattttagcggtttccgttaccggccattttccgtttcacttgaccgacatgcaagctctctgcatctcccaccgcttggttccgccggcgactcaccggctctctccggttccggtcatcagcatttcctctagaacctcaagctcattacttgcatgtgtcccaaaaatcaaatgcttcccaaaactcaaatgctgctctctgaagaaccagtctttagctactgatgcaaagaagtttgaggaagtgtcaaaaaatggaaatttggttcccctttacaagtgcattttttcggaccagctcacgccggttcttgcatatcgatgcttggtgaaggaagatgatagagaggctccgagttttctgtttgagtcggttgatcagagcacccaggggcgatatagtgttcttggagctcaaccagcaatggagattgtggcgaaagaaaataaggtgactataatggatcatgaaggaaggtgttcagtagaggagtttgttgaggatccaatggatattccgaaaagaatctcacagggttggcgtccccaacttattcatgaacttccagatgcattttgtggtggttgggtaggcttcttttcatatgatacagttcgttatgtggaaaagagaagactgccattctcaaaggcacccaaggatgacagaaatcttccagacatgcatttaggactctatgatgatgttatagtgtttgaccatgtggagaagaaaatttatgtgattcactgggtgaggttaaaccggtactcctcagttgagaaagcctatacagatggagcaaaacggttggatgaattagtggctcgagtacataacattgacttaccaaggctgtcttccggtgctgtgagcctgcatactcaccattttggtcctcctttaaagaattcaaacatgaccagtgaggcatacaaggacatagttaagaaggcaaaggagcatatactctcaggggatattttccaaattgtattaagtcagcgatttgaacgccgaacatttgctgacccatttgaagtctatagagccctgaggactgtaaatccgagtccatatatgacttacttgcaggctagagggtgtatactggttgcttcaagtccagaaattcttatgagtgcaaagaagaaaaagattgtgaatcggccattagctggaacgtctagaagagggaagacaattgaagaggataaaatgttagaagtgcagctacttcatgatgaaaagcaatgtgcagaacacatcatgctggttgatttgggtcggaatgatgttggaaaggtcaccggcgagctgcaagacggtctcacttgctgggacgctctgcgagctgcattgcctgttggaactgtcagtggtgcaccaaaggtgatggccatggagttaatcgatcagttggaggtaaacaggcgtggcccatacagcggcggatttggagcagtatcgttttccggtgatatggacattgcactagctctgaggaccatggtgtttccaacagcagcccgttttgacacaatgtactcttacaaaaatggcaacacccgtcgggagtgggttgcatatcttcaagctggtgctggtatagttgctgacagtgatcctgatgatgaataccaagagtgccagaacaaagctgcaggtcttgctcgtgccatcgacttggctgaggccgcatttgttcatgaatgctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000162 GO:0003674 GO:0003824 GO:0004049 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005950 GO:0006082 GO:0006520 GO:0006568 GO:0006576 GO:0006586 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009308 GO:0009309 GO:0009889 GO:0009987 GO:0010600 GO:0010817 GO:0016053 GO:0016829 GO:0016830 GO:0016833 GO:0018130 GO:0019222 GO:0019438 GO:0019752 GO:0031323 GO:0031326 GO:0032350 GO:0032991 GO:0034641 GO:0042401 GO:0042430 GO:0042435 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046219 GO:0046394 GO:0046483 GO:0046885 GO:0050789 GO:0050794 GO:0065007 GO:0065008 GO:0071704 GO:0090354 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1902494

KEGG Pathways

Metabolic & Signaling

ko00400 ko00405 ko01100 ko01110 ko01130 ko01230 ko02024 ko02025 map00400 map00405 map01100 map01110 map01130 map01230 map02024 map02025

Pfam Domains

Protein Families

Anth_synt_I_N Chorismate_bind

Protein Analysis

650

Amino Acids

72.26

Weight (kDa)

6.51

Isoelectric Point (pI)

46.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006462)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55870 AT3G55870 AT3G55870 AT5G05730 AT5G05730
fragaria_vesca	FvH4_3g39390 FvH4_7g24230 FvH4_7g24230
malus_domestica	MD01G1149800.v1.1 MD07G1216200.v1.1
prunus_persica	Prupe.2G248100_v2.0.a1
pyrus_communis	pycom07g19850 pycom07g19860
rosa_chinensis	RchiOBHm_Chr1g0369821
rosa_laevigata	RLG00000027103
rosa_multiflora	Rmu_sc0007743.1_g000006 Rmu_sc0008140.1_g000006 Rmu_sc0039066.1_g000001
rosa_roxburghii	Rroxscaffold_4G00287360
rosa_rugosa	Rorug01G0352500
rosa_samantha	Rh1AG361000 Rh1BG324700 Rh1CG337900 Rh1DG355100
rosa_wichuraiana	Rw0G015500 Rw1G031780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1889
AccB1I	GGYRCC	1 cut(s)	886
AccB7I	CCANNNNNTGG	2 cut(s)	307, 1412
AccBSI	CCGCTC	1 cut(s)	103
AccI	GTMKAC	1 cut(s)	1342
AclWI	GGATC	5 cut(s)	132, 705, 731, 744, 1853
AcoI	YGGCCR	3 cut(s)	253, 1403, 1632
AcsI	RAATTY	5 cut(s)	175, 493, 969, 1144, 1365
AcuI	CTGAAG	1 cut(s)	455
AcyI	GRCGYC	1 cut(s)	775
AdeI	CACNNNGTG	1 cut(s)	988
AfaI	GTAC	4 cut(s)	73, 1004, 1068, 1781
AfiI	CCNNNNNNNGG	3 cut(s)	307, 1412, 1682
AgeI	ACCGGT	1 cut(s)	999
AgsI	TTSAA	6 cut(s)	1149, 1247, 1274, 1356, 1442, 1829
AjnI	CCWGG	1 cut(s)	621
AjuI	GAANNNNNNNTTGG	2 cut(s)	1078, 1110
AloI	GAACNNNNNNTCC	2 cut(s)	483, 515
Alw21I	GWGCWC	3 cut(s)	620, 649, 1621
Alw26I	GTCTC	1 cut(s)	1568
Alw44I	GTGCAC	1 cut(s)	1617
AlwI	GGATC	5 cut(s)	132, 705, 731, 744, 1853
Ama87I	CYCGRG	1 cut(s)	1062
AoxI	GGCC	5 cut(s)	253, 1403, 1632, 1672, 1929
ApaLI	GTGCAC	1 cut(s)	1617
ApeKI	GCWGC	7 cut(s)	159, 426, 1465, 1552, 1589, 1760, 1895
ApoI	RAATTY	5 cut(s)	175, 493, 969, 1144, 1365
AsiGI	ACCGGT	1 cut(s)	999
Asp700I	GAANNNNTTC	1 cut(s)	712
AspS9I	GGNCC	4 cut(s)	526, 1130, 1673, 1740
AsuHPI	GGTGA	9 cut(s)	184, 317, 574, 697, 1000, 1112, 1534, 1639, 1724
AvaI	CYCGRG	1 cut(s)	1062
AvaII	GGWCC	3 cut(s)	526, 1130, 1740
AxyI	CCTNAGG	1 cut(s)	1289
BaeGI	GKGCMC	1 cut(s)	1621
BalI	TGGCCA	1 cut(s)	1634
BamHI	GGATCC	1 cut(s)	736
BanI	GGYRCC	1 cut(s)	886
BanII	GRGCYC	2 cut(s)	649, 1288
BarI	GAAGNNNNNNTAC	2 cut(s)	1452, 1484
BauI	CACGAG	1 cut(s)	1908
BbsI	GAAGAC	3 cut(s)	874, 1086, 1439
Bbv12I	GWGCWC	3 cut(s)	620, 649, 1621
BbvCI	CCTCAGC	1 cut(s)	1926
BbvI	GCAGC	7 cut(s)	146, 413, 1477, 1539, 1576, 1772, 1882
BccI	CCATC	5 cut(s)	194, 212, 1025, 1624, 1922
BciT130I	CCWGG	1 cut(s)	623
BclI	TGATCA	1 cut(s)	610
BcoDI	GTCTC	1 cut(s)	1568
BfaI	CTAG	5 cut(s)	197, 363, 1332, 1422, 1730
BfmI	CTRYAG	4 cut(s)	78, 160, 1279, 1896
BfuAI	ACCTGC	1 cut(s)	1889
Bme1390I	CCNGG	1 cut(s)	623
Bme18I	GGWCC	3 cut(s)	526, 1130, 1740
BmeT110I	CYCGRG	1 cut(s)	1062
BmgT120I	GGNCC	4 cut(s)	526, 1130, 1673, 1740
BmiI	GGNNCC	6 cut(s)	312, 342, 501, 585, 738, 888
BmrFI	CCNGG	1 cut(s)	623
BmrI	ACTGGG	1 cut(s)	994
BmsI	GCATC	5 cut(s)	105, 303, 448, 545, 793
BmuI	ACTGGG	1 cut(s)	994
BpiI	GAAGAC	3 cut(s)	874, 1086, 1439
Bpu10I	CCTNAGC	1 cut(s)	1926
BpuEI	CTTGAG	1 cut(s)	355
Bsa29I	ATCGAT	2 cut(s)	553, 1647
BsaBI	GATNNNNATC	1 cut(s)	95
BsaHI	GRCGYC	1 cut(s)	775
BsaI	GGTCTC	1 cut(s)	1568
BsaJI	CCNNGG	6 cut(s)	621, 622, 891, 1085, 1635, 1743
BsaWI	WCCGGW	5 cut(s)	337, 343, 999, 1097, 1709
BsaXI	ACNNNNNCTCC	2 cut(s)	989, 1019
Bsc4I	CCNNNNNNNGG	3 cut(s)	307, 1412, 1682
Bse118I	RCCGGY	6 cut(s)	251, 316, 327, 538, 999, 1544
Bse1I	ACTGG	5 cut(s)	32, 442, 989, 1158, 1350
Bse21I	CCTNAGG	1 cut(s)	1289
Bse3DI	GCAATG	4 cut(s)	663, 1493, 1592, 1722
Bse8I	GATNNNNATC	1 cut(s)	95
BseBI	CCWGG	1 cut(s)	623
BseCI	ATCGAT	2 cut(s)	553, 1647
BseDI	CCNNGG	6 cut(s)	621, 622, 891, 1085, 1635, 1743
BseGI	GGATG	3 cut(s)	96, 901, 1054
BseJI	GATNNNNATC	1 cut(s)	95
BseLI	CCNNNNNNNGG	3 cut(s)	307, 1412, 1682
BseMI	GCAATG	4 cut(s)	663, 1493, 1592, 1722
BseMII	CTCAG	5 cut(s)	1023, 1221, 1280, 1727, 1917
BseNI	ACTGG	5 cut(s)	32, 442, 989, 1158, 1350
BseRI	GAGGAG	2 cut(s)	737, 997
BseSI	GKGCMC	1 cut(s)	1621
BseXI	GCAGC	7 cut(s)	146, 413, 1477, 1539, 1576, 1772, 1882
BseYI	CCCAGC	1 cut(s)	1572
BsgI	GTGCAG	3 cut(s)	204, 1484, 1512
Bsh1285I	CGRYCG	1 cut(s)	210
BshFI	GGCC	5 cut(s)	255, 1405, 1634, 1674, 1931
BshNI	GGYRCC	1 cut(s)	886
BshTI	ACCGGT	1 cut(s)	999
BshVI	ATCGAT	2 cut(s)	553, 1647
BsiEI	CGRYCG	1 cut(s)	210
BsiHKAI	GWGCWC	3 cut(s)	620, 649, 1621
BsiHKCI	CYCGRG	1 cut(s)	1062
BslFI	GGGAC	3 cut(s)	377, 762, 1589
BslI	CCNNNNNNNGG	3 cut(s)	307, 1412, 1682
BsmAI	GTCTC	1 cut(s)	1568
BsmFI	GGGAC	3 cut(s)	377, 762, 1589
BsmI	GAATGC	1 cut(s)	1952
BsnI	GGCC	5 cut(s)	255, 1405, 1634, 1674, 1931
Bso31I	GGTCTC	1 cut(s)	1568
BsoBI	CYCGRG	1 cut(s)	1062
Bsp1286I	GDGCHC	4 cut(s)	620, 649, 1288, 1621
Bsp1407I	TGTACA	1 cut(s)	71
Bsp143I	GATC	7 cut(s)	46, 124, 610, 697, 736, 1648, 1858
Bsp19I	CCATGG	2 cut(s)	1635, 1743
BspANI	GGCC	5 cut(s)	255, 1405, 1634, 1674, 1931
BspCNI	CTCAG	5 cut(s)	1022, 1220, 1281, 1728, 1918
BspDI	ATCGAT	2 cut(s)	553, 1647
BspHI	TCATGA	4 cut(s)	700, 790, 1474, 1942
BspLI	GGNNCC	6 cut(s)	312, 342, 501, 585, 738, 888
BspMAI	CTGCAG	2 cut(s)	164, 1900
BspMI	ACCTGC	1 cut(s)	1889
BspPI	GGATC	5 cut(s)	132, 705, 731, 744, 1853
BspT107I	GGYRCC	1 cut(s)	886
BspTNI	GGTCTC	1 cut(s)	1568
BsrBI	CCGCTC	1 cut(s)	103
BsrDI	GCAATG	4 cut(s)	663, 1493, 1592, 1722
BsrFI	RCCGGY	6 cut(s)	251, 316, 327, 538, 999, 1544
BsrGI	TGTACA	1 cut(s)	71
BsrI	ACTGG	5 cut(s)	32, 442, 989, 1158, 1350
BssAI	RCCGGY	6 cut(s)	251, 316, 327, 538, 999, 1544
BssECI	CCNNGG	6 cut(s)	621, 622, 891, 1085, 1635, 1743
BssMI	GATC	7 cut(s)	46, 124, 610, 697, 736, 1648, 1858
BssNAI	GTATAC	1 cut(s)	1343
BssNI	GRCGYC	1 cut(s)	775
BssSI	CACGAG	1 cut(s)	1908
BssT1I	CCWWGG	4 cut(s)	891, 1085, 1635, 1743
Bst1107I	GTATAC	1 cut(s)	1343
Bst2BI	CACGAG	1 cut(s)	1908
Bst2UI	CCWGG	1 cut(s)	623
Bst4CI	ACNGT	6 cut(s)	847, 1044, 1297, 1562, 1609, 1856
Bst6I	CTCTTC	2 cut(s)	1420, 1437
BstACI	GRCGYC	1 cut(s)	775
BstAPI	GCANNNNNTGC	2 cut(s)	191, 1904
BstAUI	TGTACA	1 cut(s)	71
BstC8I	GCNNGC	6 cut(s)	285, 318, 1112, 1329, 1550, 1587
BstDEI	CTNAG	5 cut(s)	1009, 1207, 1289, 1736, 1926
BstDSI	CCRYGG	2 cut(s)	1635, 1743
BstEII	GGTNACC	1 cut(s)	1540
BstF5I	GGATG	3 cut(s)	96, 901, 1054
BstKTI	GATC	7 cut(s)	49, 127, 613, 700, 739, 1651, 1861
BstMAI	GTCTC	1 cut(s)	1568
BstMBI	GATC	7 cut(s)	46, 124, 610, 697, 736, 1648, 1858
BstMCI	CGRYCG	1 cut(s)	210
BstMWI	GCNNNNNNNGC	8 cut(s)	127, 191, 458, 653, 1586, 1680, 1904, 1931
BstNI	CCWGG	1 cut(s)	623
BstNSI	RCATGY	3 cut(s)	283, 390, 919
BstPI	GGTNACC	1 cut(s)	1540
BstSCI	CCNGG	1 cut(s)	621
BstSFI	CTRYAG	4 cut(s)	78, 160, 1279, 1896
BstSLI	GKGCMC	1 cut(s)	1621
BstV1I	GCAGC	7 cut(s)	146, 413, 1477, 1539, 1576, 1772, 1882
BstV2I	GAAGAC	3 cut(s)	874, 1086, 1439
BstX2I	RGATCY	2 cut(s)	124, 736
BstXI	CCANNNNNNTGG	1 cut(s)	1921
BstYI	RGATCY	2 cut(s)	124, 736
BstZ17I	GTATAC	1 cut(s)	1343
Bsu15I	ATCGAT	2 cut(s)	553, 1647
Bsu36I	CCTNAGG	1 cut(s)	1289
BsuRI	GGCC	5 cut(s)	255, 1405, 1634, 1674, 1931
BsuTUI	ATCGAT	2 cut(s)	553, 1647
BtgI	CCRYGG	2 cut(s)	1635, 1743
BtsCI	GGATG	3 cut(s)	96, 901, 1054
BtsI	GCAGTG	1 cut(s)	16
BtsIMutI	CAGTG	5 cut(s)	16, 982, 1165, 1618, 1861
BveI	ACCTGC	1 cut(s)	1889
Cac8I	GCNNGC	6 cut(s)	285, 318, 1112, 1329, 1550, 1587
CciI	TCATGA	4 cut(s)	700, 790, 1474, 1942
Cfr10I	RCCGGY	6 cut(s)	251, 316, 327, 538, 999, 1544
Cfr13I	GGNCC	4 cut(s)	526, 1130, 1673, 1740
ClaI	ATCGAT	2 cut(s)	553, 1647
CseI	GACGC	2 cut(s)	764, 1586
Csp6I	GTAC	4 cut(s)	72, 1003, 1067, 1780
CspAI	ACCGGT	1 cut(s)	999
CviQI	GTAC	4 cut(s)	72, 1003, 1067, 1780
DdeI	CTNAG	5 cut(s)	1009, 1207, 1289, 1736, 1926
DpnI	GATC	7 cut(s)	48, 126, 612, 699, 738, 1650, 1860
DpnII	GATC	7 cut(s)	46, 124, 610, 697, 736, 1648, 1858
DraI	TTTAAA	1 cut(s)	1140
DraIII	CACNNNGTG	1 cut(s)	988
EaeI	YGGCCR	3 cut(s)	253, 1403, 1632
Eam1104I	CTCTTC	2 cut(s)	1420, 1437
EarI	CTCTTC	2 cut(s)	1420, 1437
EciI	GGCGGA	3 cut(s)	159, 303, 1701
Ecl136II	GAGCTC	1 cut(s)	647
Eco130I	CCWWGG	4 cut(s)	891, 1085, 1635, 1743
Eco24I	GRGCYC	2 cut(s)	649, 1288
Eco31I	GGTCTC	1 cut(s)	1568
Eco47I	GGWCC	3 cut(s)	526, 1130, 1740
Eco53kI	GAGCTC	1 cut(s)	647
Eco57I	CTGAAG	1 cut(s)	455
Eco81I	CCTNAGG	1 cut(s)	1289
Eco88I	CYCGRG	1 cut(s)	1062
Eco91I	GGTNACC	1 cut(s)	1540
EcoICRI	GAGCTC	1 cut(s)	647
EcoO65I	GGTNACC	1 cut(s)	1540
EcoRI	GAATTC	2 cut(s)	175, 1144
EcoRII	CCWGG	1 cut(s)	621
EcoT14I	CCWWGG	4 cut(s)	891, 1085, 1635, 1743
EcoT22I	ATGCAT	2 cut(s)	808, 921
EcoT38I	GRGCYC	2 cut(s)	649, 1288
ErhI	CCWWGG	4 cut(s)	891, 1085, 1635, 1743
FalI	AAGNNNNNCTT	2 cut(s)	1078, 1110
FaqI	GGGAC	3 cut(s)	377, 762, 1589
FauNDI	CATATG	1 cut(s)	838
FbaI	TGATCA	1 cut(s)	610
FblI	GTMKAC	1 cut(s)	1342
FokI	GGATG	3 cut(s)	103, 908, 1061
FriOI	GRGCYC	2 cut(s)	649, 1288
FspBI	CTAG	5 cut(s)	197, 363, 1332, 1422, 1730
GsaI	CCCAGC	1 cut(s)	1576
HaeIII	GGCC	5 cut(s)	255, 1405, 1634, 1674, 1931
HgaI	GACGC	2 cut(s)	764, 1586
Hin1I	GRCGYC	1 cut(s)	775
HinfI	GANTC	8 cut(s)	51, 322, 602, 759, 927, 979, 1306, 1399
HphI	GGTGA	9 cut(s)	184, 317, 574, 697, 1000, 1112, 1534, 1639, 1724
Hpy166II	GTNNAC	4 cut(s)	72, 1343, 1619, 1663
Hpy188I	TCNGA	8 cut(s)	435, 526, 588, 615, 753, 1305, 1524, 1737
Hpy8I	GTNNAC	4 cut(s)	72, 1343, 1619, 1663
Hpy99I	CGWCG	1 cut(s)	1809
HpyAV	CCTTC	4 cut(s)	559, 698, 702, 1180
HpyCH4III	ACNGT	6 cut(s)	847, 1044, 1297, 1562, 1609, 1856
HpyCH4IV	ACGT	1 cut(s)	1418
HpyF10VI	GCNNNNNNNGC	8 cut(s)	127, 191, 458, 653, 1586, 1680, 1904, 1931
HpyF3I	CTNAG	5 cut(s)	1009, 1207, 1289, 1736, 1926
HpySE526I	ACGT	1 cut(s)	1418
Hsp92I	GRCGYC	1 cut(s)	775
KroI	GCCGGC	1 cut(s)	316
KroNI	GCCGGC	1 cut(s)	318
Ksp22I	TGATCA	1 cut(s)	610
Kzo9I	GATC	7 cut(s)	46, 124, 610, 697, 736, 1648, 1858
LmnI	GCTCC	5 cut(s)	589, 644, 1034, 1195, 1694
Lsp1109I	GCAGC	7 cut(s)	146, 413, 1477, 1539, 1576, 1772, 1882
LweI	GCATC	5 cut(s)	105, 303, 448, 545, 793
MaeI	CTAG	5 cut(s)	197, 363, 1332, 1422, 1730
MaeII	ACGT	1 cut(s)	1418
MaeIII	GTNAC	3 cut(s)	247, 685, 1540
MalI	GATC	7 cut(s)	48, 126, 612, 699, 738, 1650, 1860
MbiI	CCGCTC	1 cut(s)	103
MboI	GATC	7 cut(s)	46, 124, 610, 697, 736, 1648, 1858
MfeI	CAATTG	1 cut(s)	1437
MflI	RGATCY	2 cut(s)	124, 736
MhlI	GDGCHC	4 cut(s)	620, 649, 1288, 1621
MlsI	TGGCCA	1 cut(s)	1634
MluCI	AATT	8 cut(s)	175, 493, 969, 1052, 1144, 1224, 1365, 1437
MluNI	TGGCCA	1 cut(s)	1634
MlyI	GAGTC	5 cut(s)	60, 316, 611, 921, 1315
MmeI	TCCRAC	6 cut(s)	1026, 1502, 1513, 1582, 1635, 1778
Mox20I	TGGCCA	1 cut(s)	1634
Mph1103I	ATGCAT	2 cut(s)	808, 921
MreI	CGCCGGCG	1 cut(s)	316
MroNI	GCCGGC	1 cut(s)	316
MroXI	GAANNNNTTC	1 cut(s)	712
MscI	TGGCCA	1 cut(s)	1634
MseI	TTAA	5 cut(s)	995, 1139, 1182, 1232, 1643
MslI	CAYNNNNRTG	1 cut(s)	553
Msp20I	TGGCCA	1 cut(s)	1634
MspA1I	CMGCKG	2 cut(s)	77, 1683
MspR9I	CCNGG	1 cut(s)	623
MunI	CAATTG	1 cut(s)	1437
Mva1269I	GAATGC	1 cut(s)	1952
MvaI	CCWGG	1 cut(s)	623
MwoI	GCNNNNNNNGC	8 cut(s)	127, 191, 458, 653, 1586, 1680, 1904, 1931
NaeI	GCCGGC	1 cut(s)	318
NcoI	CCATGG	2 cut(s)	1635, 1743
NdeI	CATATG	1 cut(s)	838
NdeII	GATC	7 cut(s)	46, 124, 610, 697, 736, 1648, 1858
NgoMIV	GCCGGC	1 cut(s)	316
NlaIV	GGNNCC	6 cut(s)	312, 342, 501, 585, 738, 888
NmuCI	GTSAC	2 cut(s)	685, 1540
NsiI	ATGCAT	2 cut(s)	808, 921
NspI	RCATGY	3 cut(s)	283, 390, 919
PaeR7I	CTCGAG	1 cut(s)	1062
PagI	TCATGA	4 cut(s)	700, 790, 1474, 1942
PasI	CCCWGGG	1 cut(s)	622
PctI	GAATGC	1 cut(s)	1952
PdiI	GCCGGC	1 cut(s)	318
PdmI	GAANNNNTTC	1 cut(s)	712
PfeI	GAWTC	3 cut(s)	759, 979, 1399
PflMI	CCANNNNNTGG	2 cut(s)	307, 1412
PinAI	ACCGGT	1 cut(s)	999
PleI	GAGTC	5 cut(s)	59, 316, 610, 921, 1314
PpsI	GAGTC	5 cut(s)	59, 316, 610, 921, 1314
Psp124BI	GAGCTC	1 cut(s)	649
Psp6I	CCWGG	1 cut(s)	621
PspEI	GGTNACC	1 cut(s)	1540
PspFI	CCCAGC	1 cut(s)	1572
PspGI	CCWGG	1 cut(s)	621
PspN4I	GGNNCC	6 cut(s)	312, 342, 501, 585, 738, 888
PspPI	GGNCC	4 cut(s)	526, 1130, 1673, 1740
PspXI	VCTCGAGB	1 cut(s)	1062
PstI	CTGCAG	2 cut(s)	164, 1900
PsuI	RGATCY	2 cut(s)	124, 736
PvuII	CAGCTG	1 cut(s)	77
RsaI	GTAC	4 cut(s)	73, 1004, 1068, 1781
RsaNI	GTAC	4 cut(s)	72, 1003, 1067, 1780
RseI	CAYNNNNRTG	1 cut(s)	553
SacI	GAGCTC	1 cut(s)	649
SaqAI	TTAA	5 cut(s)	995, 1139, 1182, 1232, 1643
Sau3AI	GATC	7 cut(s)	46, 124, 610, 697, 736, 1648, 1858
Sau96I	GGNCC	4 cut(s)	526, 1130, 1673, 1740
SchI	GAGTC	5 cut(s)	60, 316, 611, 921, 1315
ScrFI	CCNGG	1 cut(s)	623
SduI	GDGCHC	4 cut(s)	620, 649, 1288, 1621
SfaNI	GCATC	5 cut(s)	105, 303, 448, 545, 793
SfcI	CTRYAG	4 cut(s)	78, 160, 1279, 1896
Sfr274I	CTCGAG	1 cut(s)	1062
SgrAI	CRCCGGYG	2 cut(s)	316, 1544
SinI	GGWCC	3 cut(s)	526, 1130, 1740
SlaI	CTCGAG	1 cut(s)	1062
SmiMI	CAYNNNNRTG	1 cut(s)	553
SmlI	CTYRAG	2 cut(s)	370, 1062
SmoI	CTYRAG	2 cut(s)	370, 1062
Sse9I	AATT	8 cut(s)	175, 493, 969, 1052, 1144, 1224, 1365, 1437
SspMI	CTAG	5 cut(s)	197, 363, 1332, 1422, 1730
SstI	GAGCTC	1 cut(s)	649
StyD4I	CCNGG	1 cut(s)	621
StyI	CCWWGG	4 cut(s)	891, 1085, 1635, 1743
TaaI	ACNGT	6 cut(s)	847, 1044, 1297, 1562, 1609, 1856
TaiI	ACGT	1 cut(s)	1421
TaqI	TCGA	7 cut(s)	49, 99, 111, 553, 1063, 1647, 1917
TaqII	GACCGA	2 cut(s)	196, 290
TasI	AATT	8 cut(s)	175, 493, 969, 1052, 1144, 1224, 1365, 1437
TatI	WGTACW	3 cut(s)	71, 1066, 1779
TauI	GCSGC	4 cut(s)	133, 225, 1686, 1934
TfiI	GAWTC	3 cut(s)	759, 979, 1399
Tru1I	TTAA	5 cut(s)	995, 1139, 1182, 1232, 1643
Tru9I	TTAA	5 cut(s)	995, 1139, 1182, 1232, 1643
TscAI	CASTG	5 cut(s)	16, 989, 1165, 1618, 1861
TseFI	GTSAC	2 cut(s)	685, 1540
TseI	GCWGC	7 cut(s)	159, 426, 1465, 1552, 1589, 1760, 1895
Tsp45I	GTSAC	2 cut(s)	685, 1540
TspDTI	ATGAA	9 cut(s)	717, 779, 807, 825, 1065, 1463, 1494, 1884, 1931
TspGWI	ACGGA	2 cut(s)	235, 252
TspRI	CASTG	5 cut(s)	16, 989, 1165, 1618, 1861
Van91I	CCANNNNNTGG	2 cut(s)	307, 1412
VneI	GTGCAC	1 cut(s)	1617
VpaK11BI	GGWCC	3 cut(s)	526, 1130, 1740
XapI	RAATTY	5 cut(s)	175, 493, 969, 1144, 1365
XbaI	TCTAGA	2 cut(s)	362, 1421
XceI	RCATGY	3 cut(s)	283, 390, 919
XhoI	CTCGAG	1 cut(s)	1062
XmiI	GTMKAC	1 cut(s)	1342
XmnI	GAANNNNTTC	1 cut(s)	712
XspI	CTAG	5 cut(s)	197, 363, 1332, 1422, 1730
Zsp2I	ATGCAT	2 cut(s)	808, 921

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.