Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0006462

Physical Location & Seq

Genomic Coordinates Forward (+)

59589790 .. 59594451

Gene Structure 4662 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG361000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGAAAGAAAGTTCGATGAATTTGGTTGTAGCAATTTCATTTTTATTTTTTGCTCCGTTTTTGGGGAAACATTTTTTATTTTTTTTCTGTTTCTGTTATGTTTTGTTTCATTTTTCAGCAACTGACGCAAAGAAGTTTGAGGAAGTGTCAAAAAATGGAAATTTGGTTCCCCTTTACAAGTGCATTTTTTCGGACCAGCTCACGCCGGTTCTTGCATATCGATGCTTGGTGAAGGAAGATGACAGAGAGGCTCCGAGTTTTCTGTTTGAGTCGGTTGATCAGAGCACCCAGGGGCGATATAGTGTTCTTGGAGCTCAACCAGCAATGGAGATTGTGGCGAAAGAAAATAAGGTGACTATAATGGATCATGAAGGAAGGTGTTCAGTAGAGGAGTTTGTTGAGGATCCAATGGATATTCCGAAAAGAATCTCACAGGGTTGGCGTCCCCAACTTATTCATGAACTTCCAGATGCATTTTGTGGTGGTTGGGTAGGCTTCTTTTCATATGATACAGTTCGTTATGTGGAAAAGAGAAGACTGCCATTCTCAAAGGCACCCAAGGATGACAGAAATCTTCCAGACATGCATTTAGGACTCTATGATGATGTTATAGTGTTTGACCATGTGGAGAAGAAAATTTTTGTGATTCACTGGGTGAGGTTAGACCGGTACTCCTCAGTTGAGAAAGCCTATACAGATGGAGCAAAACGGTTGGATGAATTAGTGGCTCGAGTACATAACATTGACTTACCAAGGCTGTCTTCCGGTGCTGTGAGCCTGCATACTCACCATTTTGGTCCTCCCTTAAAGAATTCAAACATGACCAGTGAGGCATACAAGGACATAGTTAAGAAGGCAAAGGAGCATATACTCTCAGGGGATATTTTCCAAATCGTATTAAGTCAGCGATTTGAACGCCGAACATTTGCTGACCCATCTGAAGTCTATAGAGCCCTGAGGACTGTAAATCCGAGTCCATATATGACTTACTTGCAGGCTAGAGGGTGTATACTGGTTGCTTCAAGTCCAGAAATTCTTATGAGTGCAAAGAAGAAAAAAATTGTGAATCGGCCATTAGCTGGAACTTCTAGAAGAGGGAAGACAATTGAAGAGGATAAAATGTTAGAAGTGCAGCTACTTCATGATGAAAAGCAATGTGCAGAACACATCATGCTGGTTGATTTGGGTCGGAATGATGTTGGAAAGGTCTCCAAATTTGGTTCTGTAAACGTGGAAAGACTAATGAACGTTGAACGATATTCCCATGTCATGCACATAAGCTCTACGGTCACCGGCGAGCTGCAAGACGGTCTCACTTGCTGGGACGCTCTGCGAGCTGCATTGCCTGTTGGAACTGTCAGTGGTGCACCAAAGGTGAAGGCCATGGAGTTAATCGATCAGTTGGAGGTAAACAGGCGTGGCCCATACAGCGGCGGATTTGGAGCAGTATCGTTTTCCGGTGATATGGACATTGCACTAGCTCTGAGGACCATGGTGTTTCCAACAGCAGCCCGTTTTGACACAATGTACTCTTACAAAAATGGCAACACCCGTCGGGAGTGGGTTGCATATCTTCAAGCTGGTGCTGGTATAGTTGCTGACAGTGATCCTGATGATGAAAACCAAGAGTGCCAGAACAAAGCTGCAGGTCTTGCTCGTGCCATCGACTTGGCTGAGGCCGCATTTGTTCATGAATGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000162 GO:0003674 GO:0003824 GO:0004049 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005950 GO:0006082 GO:0006520 GO:0006568 GO:0006576 GO:0006586 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009308 GO:0009309 GO:0009889 GO:0009987 GO:0010600 GO:0010817 GO:0016053 GO:0016829 GO:0016830 GO:0016833 GO:0018130 GO:0019222 GO:0019438 GO:0019752 GO:0031323 GO:0031326 GO:0032350 GO:0032991 GO:0034641 GO:0042401 GO:0042430 GO:0042435 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046219 GO:0046394 GO:0046483 GO:0046885 GO:0050789 GO:0050794 GO:0065007 GO:0065008 GO:0071704 GO:0090354 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1902494

KEGG Pathways

Metabolic & Signaling

ko00400 ko00405 ko01100 ko01110 ko01130 ko01230 ko02024 ko02025 map00400 map00405 map01100 map01110 map01130 map01230 map02024 map02025

Pfam Domains

Protein Families

Anth_synt_I_N Chorismate_bind

Protein Analysis

566

Amino Acids

63.85

Weight (kDa)

6.4

Isoelectric Point (pI)

42.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Anth_synt_I_N	PF04715	65 - 215	8.5e-30	Anthranilate synthase component I, N terminal region
Chorismate_bind	PF00425	276 - 547	1.6e-79	chorismate binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006462)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55870 AT3G55870 AT3G55870 AT5G05730 AT5G05730
fragaria_vesca	FvH4_3g39390 FvH4_7g24230 FvH4_7g24230
malus_domestica	MD01G1149800.v1.1 MD07G1216200.v1.1
prunus_persica	Prupe.2G248100_v2.0.a1
pyrus_communis	pycom07g19850 pycom07g19860
rosa_chinensis	RchiOBHm_Chr1g0369821
rosa_laevigata	RLG00000027103
rosa_multiflora	Rmu_sc0007743.1_g000006 Rmu_sc0008140.1_g000006 Rmu_sc0039066.1_g000001
rosa_roxburghii	Rroxscaffold_4G00287360
rosa_rugosa	Rorug01G0352500
rosa_samantha	Rh1AG361000 Rh1BG324700 Rh1CG337900 Rh1DG355100
rosa_wichuraiana	Rw0G015500 Rw1G031780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1637
AccB1I	GGYRCC	1 cut(s)	553
AccB7I	CCANNNNNTGG	1 cut(s)	1079
AccI	GTMKAC	1 cut(s)	1009
AciI	CCGC	3 cut(s)	1431, 1434, 1680
AclI	AACGTT	1 cut(s)	1248
AclWI	GGATC	4 cut(s)	372, 398, 411, 1601
AcoI	YGGCCR	1 cut(s)	1070
AcsI	RAATTY	6 cut(s)	19, 160, 636, 811, 1032, 1214
AcuI	CTGAAG	1 cut(s)	960
AcyI	GRCGYC	1 cut(s)	442
AdeI	CACNNNGTG	1 cut(s)	655
AfaI	GTAC	3 cut(s)	671, 735, 1529
AfiI	CCNNNNNNNGG	3 cut(s)	62, 1079, 1430
AgeI	ACCGGT	1 cut(s)	666
AgsI	TTSAA	6 cut(s)	816, 914, 1023, 1109, 1253, 1577
AjnI	CCWGG	1 cut(s)	288
AjuI	GAANNNNNNNTTGG	2 cut(s)	745, 777
AloI	GAACNNNNNNTCC	2 cut(s)	150, 182
Alw21I	GWGCWC	3 cut(s)	287, 316, 1369
Alw26I	GTCTC	2 cut(s)	1213, 1316
Alw44I	GTGCAC	1 cut(s)	1365
AlwI	GGATC	4 cut(s)	372, 398, 411, 1601
AlwNI	CAGNNNCTG	1 cut(s)	122
Ama87I	CYCGRG	1 cut(s)	729
AoxI	GGCC	4 cut(s)	1070, 1380, 1420, 1677
ApaLI	GTGCAC	1 cut(s)	1365
ApeKI	GCWGC	5 cut(s)	1132, 1300, 1337, 1508, 1643
ApoI	RAATTY	6 cut(s)	19, 160, 636, 811, 1032, 1214
AsiGI	ACCGGT	1 cut(s)	666
Asp700I	GAANNNNTTC	1 cut(s)	379
AspS9I	GGNCC	4 cut(s)	193, 797, 1421, 1488
AsuHPI	GGTGA	7 cut(s)	241, 364, 667, 779, 1282, 1387, 1472
AvaI	CYCGRG	1 cut(s)	729
AvaII	GGWCC	3 cut(s)	193, 797, 1488
AxyI	CCTNAGG	1 cut(s)	956
BaeGI	GKGCMC	1 cut(s)	1369
BamHI	GGATCC	1 cut(s)	403
BanI	GGYRCC	1 cut(s)	553
BanII	GRGCYC	2 cut(s)	316, 955
BarI	GAAGNNNNNNTAC	2 cut(s)	1119, 1151
BauI	CACGAG	1 cut(s)	1656
BbsI	GAAGAC	3 cut(s)	541, 753, 1106
Bbv12I	GWGCWC	3 cut(s)	287, 316, 1369
BbvCI	CCTCAGC	1 cut(s)	1674
BbvI	GCAGC	5 cut(s)	1144, 1287, 1324, 1520, 1630
BccI	CCATC	3 cut(s)	692, 943, 1670
BciT130I	CCWGG	1 cut(s)	290
BclI	TGATCA	1 cut(s)	277
BcoDI	GTCTC	2 cut(s)	1213, 1316
BfaI	CTAG	3 cut(s)	999, 1089, 1478
BfmI	CTRYAG	2 cut(s)	946, 1644
BfuAI	ACCTGC	1 cut(s)	1637
BisI	GCNGC	7 cut(s)	1133, 1301, 1338, 1432, 1509, 1644, 1680
BlsI	GCNGC	7 cut(s)	1134, 1302, 1339, 1433, 1510, 1645, 1681
Bme1390I	CCNGG	1 cut(s)	290
Bme18I	GGWCC	3 cut(s)	193, 797, 1488
BmeT110I	CYCGRG	1 cut(s)	729
BmgT120I	GGNCC	4 cut(s)	193, 797, 1421, 1488
BmiI	GGNNCC	4 cut(s)	168, 252, 405, 555
BmrFI	CCNGG	1 cut(s)	290
BmrI	ACTGGG	1 cut(s)	661
BmsI	GCATC	2 cut(s)	212, 460
BmuI	ACTGGG	1 cut(s)	661
BpiI	GAAGAC	3 cut(s)	541, 753, 1106
Bpu10I	CCTNAGC	1 cut(s)	1674
Bsa29I	ATCGAT	2 cut(s)	220, 1395
BsaHI	GRCGYC	1 cut(s)	442
BsaI	GGTCTC	2 cut(s)	1213, 1316
BsaJI	CCNNGG	6 cut(s)	288, 289, 558, 752, 1383, 1491
BsaWI	WCCGGW	3 cut(s)	666, 764, 1457
BsaXI	ACNNNNNCTCC	2 cut(s)	656, 686
Bsc4I	CCNNNNNNNGG	3 cut(s)	62, 1079, 1430
Bse118I	RCCGGY	3 cut(s)	205, 666, 1292
Bse1I	ACTGG	3 cut(s)	656, 825, 1017
Bse21I	CCTNAGG	1 cut(s)	956
Bse3DI	GCAATG	4 cut(s)	330, 1160, 1340, 1470
BseBI	CCWGG	1 cut(s)	290
BseCI	ATCGAT	2 cut(s)	220, 1395
BseDI	CCNNGG	6 cut(s)	288, 289, 558, 752, 1383, 1491
BseGI	GGATG	2 cut(s)	568, 721
BseLI	CCNNNNNNNGG	3 cut(s)	62, 1079, 1430
BseMI	GCAATG	4 cut(s)	330, 1160, 1340, 1470
BseMII	CTCAG	5 cut(s)	690, 888, 947, 1475, 1665
BseNI	ACTGG	3 cut(s)	656, 825, 1017
BseRI	GAGGAG	2 cut(s)	404, 664
BseSI	GKGCMC	1 cut(s)	1369
BseXI	GCAGC	5 cut(s)	1144, 1287, 1324, 1520, 1630
BseYI	CCCAGC	1 cut(s)	1320
BsgI	GTGCAG	2 cut(s)	1151, 1179
BshFI	GGCC	4 cut(s)	1072, 1382, 1422, 1679
BshNI	GGYRCC	1 cut(s)	553
BshTI	ACCGGT	1 cut(s)	666
BshVI	ATCGAT	2 cut(s)	220, 1395
BsiHKAI	GWGCWC	3 cut(s)	287, 316, 1369
BsiHKCI	CYCGRG	1 cut(s)	729
BsiSI	CCGG	5 cut(s)	206, 667, 765, 1293, 1458
BslFI	GGGAC	2 cut(s)	429, 1337
BslI	CCNNNNNNNGG	3 cut(s)	62, 1079, 1430
BsmAI	GTCTC	2 cut(s)	1213, 1316
BsmFI	GGGAC	2 cut(s)	429, 1337
BsmI	GAATGC	1 cut(s)	1700
BsnI	GGCC	4 cut(s)	1072, 1382, 1422, 1679
Bso31I	GGTCTC	2 cut(s)	1213, 1316
BsoBI	CYCGRG	1 cut(s)	729
Bsp1286I	GDGCHC	4 cut(s)	287, 316, 955, 1369
Bsp143I	GATC	5 cut(s)	277, 364, 403, 1396, 1606
Bsp19I	CCATGG	2 cut(s)	1383, 1491
BspACI	CCGC	3 cut(s)	1431, 1434, 1680
BspANI	GGCC	4 cut(s)	1072, 1382, 1422, 1679
BspCNI	CTCAG	5 cut(s)	689, 887, 948, 1476, 1666
BspDI	ATCGAT	2 cut(s)	220, 1395
BspHI	TCATGA	4 cut(s)	367, 457, 1141, 1690
BspLI	GGNNCC	4 cut(s)	168, 252, 405, 555
BspMAI	CTGCAG	1 cut(s)	1648
BspMI	ACCTGC	1 cut(s)	1637
BspPI	GGATC	4 cut(s)	372, 398, 411, 1601
BspT107I	GGYRCC	1 cut(s)	553
BspTNI	GGTCTC	2 cut(s)	1213, 1316
BsrDI	GCAATG	4 cut(s)	330, 1160, 1340, 1470
BsrFI	RCCGGY	3 cut(s)	205, 666, 1292
BsrI	ACTGG	3 cut(s)	656, 825, 1017
BssAI	RCCGGY	3 cut(s)	205, 666, 1292
BssECI	CCNNGG	6 cut(s)	288, 289, 558, 752, 1383, 1491
BssMI	GATC	5 cut(s)	277, 364, 403, 1396, 1606
BssNAI	GTATAC	1 cut(s)	1010
BssNI	GRCGYC	1 cut(s)	442
BssSI	CACGAG	1 cut(s)	1656
BssT1I	CCWWGG	4 cut(s)	558, 752, 1383, 1491
Bst1107I	GTATAC	1 cut(s)	1010
Bst2BI	CACGAG	1 cut(s)	1656
Bst2UI	CCWGG	1 cut(s)	290
Bst4CI	ACNGT	7 cut(s)	514, 711, 964, 1288, 1310, 1357, 1604
Bst6I	CTCTTC	2 cut(s)	1087, 1104
BstACI	GRCGYC	1 cut(s)	442
BstAPI	GCANNNNNTGC	1 cut(s)	1652
BstC8I	GCNNGC	4 cut(s)	779, 996, 1298, 1335
BstDEI	CTNAG	5 cut(s)	676, 874, 956, 1484, 1674
BstDSI	CCRYGG	2 cut(s)	1383, 1491
BstEII	GGTNACC	1 cut(s)	1288
BstF5I	GGATG	2 cut(s)	568, 721
BstKTI	GATC	5 cut(s)	280, 367, 406, 1399, 1609
BstMAI	GTCTC	2 cut(s)	1213, 1316
BstMBI	GATC	5 cut(s)	277, 364, 403, 1396, 1606
BstMWI	GCNNNNNNNGC	6 cut(s)	125, 320, 1334, 1428, 1652, 1679
BstNI	CCWGG	1 cut(s)	290
BstNSI	RCATGY	1 cut(s)	586
BstPI	GGTNACC	1 cut(s)	1288
BstSCI	CCNGG	1 cut(s)	288
BstSFI	CTRYAG	2 cut(s)	946, 1644
BstSLI	GKGCMC	1 cut(s)	1369
BstV1I	GCAGC	5 cut(s)	1144, 1287, 1324, 1520, 1630
BstV2I	GAAGAC	3 cut(s)	541, 753, 1106
BstX2I	RGATCY	1 cut(s)	403
BstXI	CCANNNNNNTGG	1 cut(s)	1669
BstYI	RGATCY	1 cut(s)	403
BstZ17I	GTATAC	1 cut(s)	1010
Bsu15I	ATCGAT	2 cut(s)	220, 1395
Bsu36I	CCTNAGG	1 cut(s)	956
BsuRI	GGCC	4 cut(s)	1072, 1382, 1422, 1679
BsuTUI	ATCGAT	2 cut(s)	220, 1395
BtgI	CCRYGG	2 cut(s)	1383, 1491
BtsCI	GGATG	2 cut(s)	568, 721
BtsIMutI	CAGTG	4 cut(s)	649, 832, 1366, 1609
BveI	ACCTGC	1 cut(s)	1637
Cac8I	GCNNGC	4 cut(s)	779, 996, 1298, 1335
CaiI	CAGNNNCTG	1 cut(s)	122
CciI	TCATGA	4 cut(s)	367, 457, 1141, 1690
Cfr10I	RCCGGY	3 cut(s)	205, 666, 1292
Cfr13I	GGNCC	4 cut(s)	193, 797, 1421, 1488
ClaI	ATCGAT	2 cut(s)	220, 1395
CseI	GACGC	3 cut(s)	134, 431, 1334
Csp6I	GTAC	3 cut(s)	670, 734, 1528
CspAI	ACCGGT	1 cut(s)	666
CviQI	GTAC	3 cut(s)	670, 734, 1528
DdeI	CTNAG	5 cut(s)	676, 874, 956, 1484, 1674
DpnI	GATC	5 cut(s)	279, 366, 405, 1398, 1608
DpnII	GATC	5 cut(s)	277, 364, 403, 1396, 1606
DraIII	CACNNNGTG	1 cut(s)	655
EaeI	YGGCCR	1 cut(s)	1070
Eam1104I	CTCTTC	2 cut(s)	1087, 1104
EarI	CTCTTC	2 cut(s)	1087, 1104
EciI	GGCGGA	1 cut(s)	1449
Ecl136II	GAGCTC	1 cut(s)	314
Eco130I	CCWWGG	4 cut(s)	558, 752, 1383, 1491
Eco24I	GRGCYC	2 cut(s)	316, 955
Eco31I	GGTCTC	2 cut(s)	1213, 1316
Eco47I	GGWCC	3 cut(s)	193, 797, 1488
Eco53kI	GAGCTC	1 cut(s)	314
Eco57I	CTGAAG	1 cut(s)	960
Eco81I	CCTNAGG	1 cut(s)	956
Eco88I	CYCGRG	1 cut(s)	729
Eco91I	GGTNACC	1 cut(s)	1288
EcoICRI	GAGCTC	1 cut(s)	314
EcoO65I	GGTNACC	1 cut(s)	1288
EcoRI	GAATTC	1 cut(s)	811
EcoRII	CCWGG	1 cut(s)	288
EcoT14I	CCWWGG	4 cut(s)	558, 752, 1383, 1491
EcoT22I	ATGCAT	2 cut(s)	475, 588
EcoT38I	GRGCYC	2 cut(s)	316, 955
ErhI	CCWWGG	4 cut(s)	558, 752, 1383, 1491
FalI	AAGNNNNNCTT	2 cut(s)	745, 777
FaqI	GGGAC	2 cut(s)	429, 1337
FauNDI	CATATG	1 cut(s)	505
FbaI	TGATCA	1 cut(s)	277
FblI	GTMKAC	1 cut(s)	1009
Fnu4HI	GCNGC	7 cut(s)	1133, 1301, 1338, 1432, 1509, 1644, 1680
FokI	GGATG	2 cut(s)	575, 728
FriOI	GRGCYC	2 cut(s)	316, 955
Fsp4HI	GCNGC	7 cut(s)	1133, 1301, 1338, 1432, 1509, 1644, 1680
FspBI	CTAG	3 cut(s)	999, 1089, 1478
GluI	GCNGC	7 cut(s)	1133, 1301, 1338, 1432, 1509, 1644, 1680
GsaI	CCCAGC	1 cut(s)	1324
HaeIII	GGCC	4 cut(s)	1072, 1382, 1422, 1679
HapII	CCGG	5 cut(s)	206, 667, 765, 1293, 1458
HgaI	GACGC	3 cut(s)	134, 431, 1334
Hin1I	GRCGYC	1 cut(s)	442
HinfI	GANTC	6 cut(s)	269, 426, 594, 646, 973, 1066
HpaII	CCGG	5 cut(s)	206, 667, 765, 1293, 1458
HphI	GGTGA	7 cut(s)	241, 364, 667, 779, 1282, 1387, 1472
Hpy166II	GTNNAC	4 cut(s)	1010, 1228, 1367, 1411
Hpy188I	TCNGA	8 cut(s)	193, 255, 282, 420, 940, 972, 1191, 1485
Hpy8I	GTNNAC	4 cut(s)	1010, 1228, 1367, 1411
Hpy99I	CGWCG	1 cut(s)	1557
HpyAV	CCTTC	5 cut(s)	226, 365, 369, 847, 1372
HpyCH4III	ACNGT	7 cut(s)	514, 711, 964, 1288, 1310, 1357, 1604
HpyCH4IV	ACGT	2 cut(s)	1230, 1248
HpyF10VI	GCNNNNNNNGC	6 cut(s)	125, 320, 1334, 1428, 1652, 1679
HpyF3I	CTNAG	5 cut(s)	676, 874, 956, 1484, 1674
HpySE526I	ACGT	2 cut(s)	1230, 1248
Hsp92I	GRCGYC	1 cut(s)	442
Ksp22I	TGATCA	1 cut(s)	277
Kzo9I	GATC	5 cut(s)	277, 364, 403, 1396, 1606
LmnI	GCTCC	6 cut(s)	58, 256, 311, 701, 862, 1442
Lsp1109I	GCAGC	5 cut(s)	1144, 1287, 1324, 1520, 1630
LweI	GCATC	2 cut(s)	212, 460
MaeI	CTAG	3 cut(s)	999, 1089, 1478
MaeII	ACGT	2 cut(s)	1230, 1248
MaeIII	GTNAC	2 cut(s)	352, 1288
MalI	GATC	5 cut(s)	279, 366, 405, 1398, 1608
MboI	GATC	5 cut(s)	277, 364, 403, 1396, 1606
MfeI	CAATTG	1 cut(s)	1104
MflI	RGATCY	1 cut(s)	403
MhlI	GDGCHC	4 cut(s)	287, 316, 955, 1369
MlyI	GAGTC	3 cut(s)	278, 588, 982
MmeI	TCCRAC	6 cut(s)	693, 1169, 1180, 1330, 1383, 1526
Mph1103I	ATGCAT	2 cut(s)	475, 588
MroXI	GAANNNNTTC	1 cut(s)	379
MseI	TTAA	4 cut(s)	806, 849, 899, 1391
MslI	CAYNNNNRTG	1 cut(s)	220
MspA1I	CMGCKG	1 cut(s)	1431
MspI	CCGG	5 cut(s)	206, 667, 765, 1293, 1458
MspR9I	CCNGG	1 cut(s)	290
MunI	CAATTG	1 cut(s)	1104
Mva1269I	GAATGC	1 cut(s)	1700
MvaI	CCWGG	1 cut(s)	290
MwoI	GCNNNNNNNGC	6 cut(s)	125, 320, 1334, 1428, 1652, 1679
NcoI	CCATGG	2 cut(s)	1383, 1491
NdeI	CATATG	1 cut(s)	505
NdeII	GATC	5 cut(s)	277, 364, 403, 1396, 1606
NlaIV	GGNNCC	4 cut(s)	168, 252, 405, 555
NmuCI	GTSAC	2 cut(s)	352, 1288
NsiI	ATGCAT	2 cut(s)	475, 588
NspI	RCATGY	1 cut(s)	586
PaeR7I	CTCGAG	1 cut(s)	729
PagI	TCATGA	4 cut(s)	367, 457, 1141, 1690
PasI	CCCWGGG	1 cut(s)	289
PctI	GAATGC	1 cut(s)	1700
PdmI	GAANNNNTTC	1 cut(s)	379
PfeI	GAWTC	3 cut(s)	426, 646, 1066
PflMI	CCANNNNNTGG	1 cut(s)	1079
PinAI	ACCGGT	1 cut(s)	666
PkrI	GCNGC	7 cut(s)	1134, 1302, 1339, 1433, 1510, 1645, 1681
PleI	GAGTC	3 cut(s)	277, 588, 981
PpsI	GAGTC	3 cut(s)	277, 588, 981
Psp124BI	GAGCTC	1 cut(s)	316
Psp1406I	AACGTT	1 cut(s)	1248
Psp6I	CCWGG	1 cut(s)	288
PspEI	GGTNACC	1 cut(s)	1288
PspFI	CCCAGC	1 cut(s)	1320
PspGI	CCWGG	1 cut(s)	288
PspN4I	GGNNCC	4 cut(s)	168, 252, 405, 555
PspPI	GGNCC	4 cut(s)	193, 797, 1421, 1488
PspXI	VCTCGAGB	1 cut(s)	729
PstI	CTGCAG	1 cut(s)	1648
PstNI	CAGNNNCTG	1 cut(s)	122
PsuI	RGATCY	1 cut(s)	403
RsaI	GTAC	3 cut(s)	671, 735, 1529
RsaNI	GTAC	3 cut(s)	670, 734, 1528
RseI	CAYNNNNRTG	1 cut(s)	220
SacI	GAGCTC	1 cut(s)	316
SaqAI	TTAA	4 cut(s)	806, 849, 899, 1391
SatI	GCNGC	7 cut(s)	1133, 1301, 1338, 1432, 1509, 1644, 1680
Sau3AI	GATC	5 cut(s)	277, 364, 403, 1396, 1606
Sau96I	GGNCC	4 cut(s)	193, 797, 1421, 1488
SchI	GAGTC	3 cut(s)	278, 588, 982
ScrFI	CCNGG	1 cut(s)	290
SduI	GDGCHC	4 cut(s)	287, 316, 955, 1369
SfaNI	GCATC	2 cut(s)	212, 460
SfcI	CTRYAG	2 cut(s)	946, 1644
Sfr274I	CTCGAG	1 cut(s)	729
SgrAI	CRCCGGYG	1 cut(s)	1292
SinI	GGWCC	3 cut(s)	193, 797, 1488
SlaI	CTCGAG	1 cut(s)	729
SmiMI	CAYNNNNRTG	1 cut(s)	220
SmlI	CTYRAG	1 cut(s)	729
SmoI	CTYRAG	1 cut(s)	729
SsiI	CCGC	3 cut(s)	1431, 1434, 1680
SspMI	CTAG	3 cut(s)	999, 1089, 1478
SstI	GAGCTC	1 cut(s)	316
StyD4I	CCNGG	1 cut(s)	288
StyI	CCWWGG	4 cut(s)	558, 752, 1383, 1491
TaaI	ACNGT	7 cut(s)	514, 711, 964, 1288, 1310, 1357, 1604
TaiI	ACGT	2 cut(s)	1233, 1251
TaqI	TCGA	5 cut(s)	14, 220, 730, 1395, 1665
TatI	WGTACW	2 cut(s)	733, 1527
TauI	GCSGC	2 cut(s)	1434, 1682
TfiI	GAWTC	3 cut(s)	426, 646, 1066
Tru1I	TTAA	4 cut(s)	806, 849, 899, 1391
Tru9I	TTAA	4 cut(s)	806, 849, 899, 1391
TscAI	CASTG	4 cut(s)	656, 832, 1366, 1609
TseFI	GTSAC	2 cut(s)	352, 1288
TseI	GCWGC	5 cut(s)	1132, 1300, 1337, 1508, 1643
Tsp45I	GTSAC	2 cut(s)	352, 1288
TspGWI	ACGGA	1 cut(s)	45
TspRI	CASTG	4 cut(s)	656, 832, 1366, 1609
Van91I	CCANNNNNTGG	1 cut(s)	1079
VneI	GTGCAC	1 cut(s)	1365
VpaK11BI	GGWCC	3 cut(s)	193, 797, 1488
XapI	RAATTY	6 cut(s)	19, 160, 636, 811, 1032, 1214
XbaI	TCTAGA	1 cut(s)	1088
XceI	RCATGY	1 cut(s)	586
XhoI	CTCGAG	1 cut(s)	729
XmiI	GTMKAC	1 cut(s)	1009
XmnI	GAANNNNTTC	1 cut(s)	379
XspI	CTAG	3 cut(s)	999, 1089, 1478
Zsp2I	ATGCAT	2 cut(s)	475, 588

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.